hg19_v2_chr14_+_74486043_74486072	0.203236	UUGUUCG	ENST00000464394.1|CCDC176|ENSG00000119636.11|coiled-coil domain containing 176 	ENST00000394009.3|CCDC176|ENSG00000119636.11|coiled-coil domain containing 176
hg19_v2_chr3_-_114790179_114790222	0.161816	UUGUUCG	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr17_+_14204389_14204416	0.127859	UUGUUCG	ENST00000360954.2|HS3ST3B1|ENSG00000125430.4|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1
hg19_v2_chr19_-_14316980_14316999	0.12515	UUGUUCG	ENST00000361434.3|LPHN1|ENSG00000072071.12|latrophilin 1 	ENST00000340736.6|LPHN1|ENSG00000072071.12|latrophilin 1
hg19_v2_chr11_-_74178582_74178774	0.124791	UUGUUCG	ENST00000531854.1|KCNE3|ENSG00000175538.6|potassium voltage-gated channel, Isk-related family, member 3 	ENST00000526855.1|KCNE3|ENSG00000175538.6|potassium voltage-gated channel, Isk-related family, member 3 	ENST00000529425.1|KCNE3|ENSG00000175538.6|potassium voltage-gated channel, Isk-related family, member 3 	ENST00000310128.4|KCNE3|ENSG00000175538.6|potassium voltage-gated channel, Isk-related family, member 3 	ENST00000532569.1|KCNE3|ENSG00000175538.6|potassium voltage-gated channel, Isk-related family, member 3
hg19_v2_chrX_+_95939711_95939786	0.106838	UUGUUCG	ENST00000373049.4|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2 	ENST00000324765.8|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2
hg19_v2_chr6_+_159084188_159084212	0.0935578	UUGUUCG	ENST00000367081.3|SYTL3|ENSG00000164674.11|synaptotagmin-like 3
hg19_v2_chr2_-_172750733_172750762	0.0928258	UUGUUCG	ENST00000392592.4|SLC25A12|ENSG00000115840.9|solute carrier family 25 (aspartate/glutamate carrier), member 12 	ENST00000422440.2|SLC25A12|ENSG00000115840.9|solute carrier family 25 (aspartate/glutamate carrier), member 12
hg19_v2_chr18_-_53255766_53255860	0.0928208	UUGUUCG	ENST00000566286.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000564999.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000566279.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000354452.3|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000356073.4|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr18_+_13218769_13218792	0.0914652	UUGUUCG	ENST00000399848.3|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4 	ENST00000361205.4|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4
hg19_v2_chr1_+_61547894_61547980	0.0900923	UUGUUCG	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr1_+_180601139_180601180	0.0888386	UUGUUCG	ENST00000367590.4|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1 	ENST00000367589.3|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1
hg19_v2_chr13_-_31736027_31736064	0.0857776	UUGUUCG	ENST00000380406.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000320027.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000380405.4|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1
hg19_v2_chr2_+_179345173_179345221	0.0843384	UUGUUCG	ENST00000234453.5|PLEKHA3|ENSG00000116095.6|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
hg19_v2_chr1_-_213189108_213189154	0.0804686	UUGUUCG	ENST00000535388.1|ANGEL2|ENSG00000174606.8|angel homolog 2 (Drosophila)
hg19_v2_chr11_-_86666427_86666450	0.072393	UUGUUCG	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chr16_+_86544113_86544145	0.0721899	UUGUUCG	ENST00000262426.4|FOXF1|ENSG00000103241.5|forkhead box F1
hg19_v2_chrX_-_100604184_100604184	0.0712457	UUGUUCG	ENST00000372902.3|TIMM8A|ENSG00000126953.5|translocase of inner mitochondrial membrane 8 homolog A (yeast)
hg19_v2_chr14_+_57735614_57735629	0.0699216	UUGUUCG	ENST00000261558.3|AP5M1|ENSG00000053770.7|adaptor-related protein complex 5, mu 1 subunit
hg19_v2_chr7_+_17338239_17338262	0.0672878	UUGUUCG	ENST00000242057.4|AHR|ENSG00000106546.8|aryl hydrocarbon receptor
hg19_v2_chr9_+_26956371_26956463	0.067163	UUGUUCG	ENST00000380062.5|IFT74|ENSG00000096872.11|intraflagellar transport 74 homolog (Chlamydomonas) 	ENST00000518614.1|IFT74|ENSG00000096872.11|intraflagellar transport 74 homolog (Chlamydomonas)
hg19_v2_chr6_+_149068464_149068559	0.0648789	UUGUUCG	ENST00000367463.4|UST|ENSG00000111962.7|uronyl-2-sulfotransferase
hg19_v2_chr19_-_7293942_7294045	0.0647713	UUGUUCG	ENST00000341500.5|INSR|ENSG00000171105.9|insulin receptor 	ENST00000302850.5|INSR|ENSG00000171105.9|insulin receptor
hg19_v2_chr4_+_72204755_72204778	0.0626125	UUGUUCG	ENST00000512686.1|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4 	ENST00000340595.3|SLC4A4|ENSG00000080493.9|solute carrier family 4 (sodium bicarbonate cotransporter), member 4
hg19_v2_chr6_+_4021554_4021656	0.0624825	UUGUUCG	ENST00000337659.6|PRPF4B|ENSG00000112739.12|pre-mRNA processing factor 4B
hg19_v2_chr17_-_7832753_7832753	0.0599552	UUGUUCG	ENST00000303790.2|KCNAB3|ENSG00000170049.5|potassium voltage-gated channel, shaker-related subfamily, beta member 3
hg19_v2_chr9_-_135230336_135230398	0.0598274	UUGUUCG	ENST00000224140.5|SETX|ENSG00000107290.9|senataxin 	ENST00000372169.2|SETX|ENSG00000107290.9|senataxin 	ENST00000393220.1|SETX|ENSG00000107290.9|senataxin
hg19_v2_chr13_-_95364389_95364389	0.0587617	UUGUUCG	ENST00000376945.2|SOX21|ENSG00000125285.4|SRY (sex determining region Y)-box 21
hg19_v2_chr3_+_197687071_197687128	0.0572641	UUGUUCG	ENST00000482695.1|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000330198.4|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000419117.1|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000420910.2|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000332636.5|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family)
hg19_v2_chr1_-_57045228_57045242	0.0566298	UUGUUCG	ENST00000371250.3|PPAP2B|ENSG00000162407.8|phosphatidic acid phosphatase type 2B
hg19_v2_chr1_-_225840747_225840860	0.0526831	UUGUUCG	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr14_-_70883708_70883819	0.0513873	UUGUUCG	ENST00000256366.4|SYNJ2BP|ENSG00000213463.3|synaptojanin 2 binding protein
hg19_v2_chr5_+_56111361_56111403	0.049939	UUGUUCG	ENST00000399503.3|MAP3K1|ENSG00000095015.5|mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase
hg19_v2_chr10_-_52383644_52383743	0.0464735	UUGUUCG	ENST00000361781.2|SGMS1|ENSG00000198964.9|sphingomyelin synthase 1
hg19_v2_chr7_-_130080977_130081078	0.0464268	UUGUUCG	ENST00000223208.5|CEP41|ENSG00000106477.14|centrosomal protein 41kDa
hg19_v2_chr12_+_56401268_56401443	0.0454906	UUGUUCG	ENST00000262032.5|IKZF4|ENSG00000123411.10|IKAROS family zinc finger 4 (Eos)
hg19_v2_chr5_+_145583156_145583180	0.0453864	UUGUUCG	ENST00000265271.5|RBM27|ENSG00000091009.6|RNA binding motif protein 27
hg19_v2_chr7_+_75831181_75831236	0.0449838	UUGUUCG	ENST00000388802.4|SRRM3|ENSG00000177679.14|serine/arginine repetitive matrix 3 	ENST00000326382.8|SRRM3|ENSG00000177679.14|serine/arginine repetitive matrix 3
hg19_v2_chr16_+_77822427_77822469	0.0448189	UUGUUCG	ENST00000302536.2|VAT1L|ENSG00000171724.2|vesicle amine transport 1-like
hg19_v2_chr22_+_29168652_29168770	0.0448128	UUGUUCG	ENST00000249064.4|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117 	ENST00000444523.1|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117 	ENST00000448492.2|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117 	ENST00000421503.2|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117
hg19_v2_chr5_+_149109825_149109907	0.0446582	UUGUUCG	ENST00000360453.4|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000394320.3|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000309241.5|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg19_v2_chr16_+_2587998_2588011	0.044101	UUGUUCG	ENST00000441549.3|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1 	ENST00000268673.7|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1
hg19_v2_chr10_-_89623194_89623194	0.0438249	UUGUUCG	ENST00000445946.3|KLLN|ENSG00000227268.3|killin, p53-regulated DNA replication inhibitor
hg19_v2_chrX_+_69664706_69664819	0.043381	UUGUUCG	ENST00000194900.4|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila) 	ENST00000374360.3|DLG3|ENSG00000082458.7|discs, large homolog 3 (Drosophila)
hg19_v2_chr14_+_55493920_55494013	0.0433186	UUGUUCG	ENST00000395472.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4 	ENST00000555846.1|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chr20_+_43514315_43514319	0.0415112	UUGUUCG	ENST00000353703.4|YWHAB|ENSG00000166913.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
hg19_v2_chr14_-_96830207_96830207	0.0406068	UUGUUCG	ENST00000359933.4|ATG2B|ENSG00000066739.7|autophagy related 2B
hg19_v2_chr17_-_27621125_27621143	0.0405248	UUGUUCG	ENST00000579665.1|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2 	ENST00000225388.4|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2
hg19_v2_chr11_+_34127142_34127189	0.0402492	UUGUUCG	ENST00000257829.3|NAT10|ENSG00000135372.4|N-acetyltransferase 10 (GCN5-related) 	ENST00000531159.2|NAT10|ENSG00000135372.4|N-acetyltransferase 10 (GCN5-related)
hg19_v2_chr13_+_73632897_73632930	0.0373682	UUGUUCG	ENST00000377687.4|KLF5|ENSG00000102554.9|Kruppel-like factor 5 (intestinal)
hg19_v2_chr1_-_10856694_10856715	0.036986	UUGUUCG	ENST00000377022.3|CASZ1|ENSG00000130940.10|castor zinc finger 1 	ENST00000344008.5|CASZ1|ENSG00000130940.10|castor zinc finger 1
hg19_v2_chr19_+_47421933_47421933	0.0360085	UUGUUCG	ENST00000404338.3|ARHGAP35|ENSG00000160007.13|Rho GTPase activating protein 35
hg19_v2_chr19_-_6279932_6280000	0.035896	UUGUUCG	ENST00000252674.7|MLLT1|ENSG00000130382.7|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1
hg19_v2_chr17_+_55162453_55162594	0.0341938	UUGUUCG	ENST00000575322.1|AKAP1|ENSG00000121057.8|A kinase (PRKA) anchor protein 1 	ENST00000337714.3|AKAP1|ENSG00000121057.8|A kinase (PRKA) anchor protein 1 	ENST00000314126.3|AKAP1|ENSG00000121057.8|A kinase (PRKA) anchor protein 1
hg19_v2_chr2_+_133174147_133174235	0.032977	UUGUUCG	ENST00000329321.3|GPR39|ENSG00000183840.5|G protein-coupled receptor 39
hg19_v2_chr21_-_38362497_38362541	0.0322037	UUGUUCG	ENST00000427746.1|HLCS|ENSG00000159267.10|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) 	ENST00000336648.4|HLCS|ENSG00000159267.10|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)
hg19_v2_chr12_+_103351444_103351464	0.0321374	UUGUUCG	ENST00000266744.3|ASCL1|ENSG00000139352.3|achaete-scute family bHLH transcription factor 1
hg19_v2_chr9_-_127533519_127533576	0.0308127	UUGUUCG	ENST00000487099.2|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000344523.4|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000373584.3|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1
hg19_v2_chr8_-_65711310_65711324	0.0303951	UUGUUCG	ENST00000310193.3|CYP7B1|ENSG00000172817.3|cytochrome P450, family 7, subfamily B, polypeptide 1
hg19_v2_chr7_-_27183263_27183287	0.0300661	UUGUUCG	ENST00000222726.3|HOXA5|ENSG00000106004.4|homeobox A5
hg19_v2_chr16_-_12897642_12897874	0.0299153	UUGUUCG	ENST00000433677.2|CPPED1|ENSG00000103381.7|calcineurin-like phosphoesterase domain containing 1 	ENST00000261660.4|CPPED1|ENSG00000103381.7|calcineurin-like phosphoesterase domain containing 1 	ENST00000381774.4|CPPED1|ENSG00000103381.7|calcineurin-like phosphoesterase domain containing 1
hg19_v2_chr17_+_28804380_28804460	0.0296545	UUGUUCG	ENST00000225724.5|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000451249.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000467337.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000581721.1|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000414833.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1
hg19_v2_chr4_-_83295103_83295157	0.0290541	UUGUUCG	ENST00000313899.7|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 	ENST00000352301.4|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 	ENST00000509107.1|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 	ENST00000353341.4|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 	ENST00000541060.1|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v2_chr18_+_18943554_18943587	0.029003	UUGUUCG	ENST00000580732.2|GREB1L|ENSG00000141449.10|growth regulation by estrogen in breast cancer-like
hg19_v2_chr2_-_178937478_178937510	0.0289824	UUGUUCG	ENST00000286063.6|PDE11A|ENSG00000128655.12|phosphodiesterase 11A
hg19_v2_chr15_-_72410109_72410161	0.027791	UUGUUCG	ENST00000564571.1|MYO9A|ENSG00000066933.11|myosin IXA
hg19_v2_chr1_-_182573514_182573543	0.0274294	UUGUUCG	ENST00000367558.5|RGS16|ENSG00000143333.6|regulator of G-protein signaling 16
hg19_v2_chr16_+_69458428_69458499	0.0266011	UUGUUCG	ENST00000512062.1|CYB5B|ENSG00000103018.12|cytochrome b5 type B (outer mitochondrial membrane) 	ENST00000307892.8|CYB5B|ENSG00000103018.12|cytochrome b5 type B (outer mitochondrial membrane)
hg19_v2_chr4_+_113152881_113152912	0.0265003	UUGUUCG	ENST00000274000.5|AP1AR|ENSG00000138660.7|adaptor-related protein complex 1 associated regulatory protein
hg19_v2_chr1_+_62902308_62902335	0.0263198	UUGUUCG	ENST00000339950.4|USP1|ENSG00000162607.8|ubiquitin specific peptidase 1
hg19_v2_chr17_-_3749515_3749551	0.025615	UUGUUCG	ENST00000158149.3|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85 	ENST00000389005.4|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85
hg19_v2_chr9_+_115983808_115983880	0.0255378	UUGUUCG	ENST00000374210.6|SLC31A1|ENSG00000136868.9|solute carrier family 31 (copper transporter), member 1 	ENST00000374212.4|SLC31A1|ENSG00000136868.9|solute carrier family 31 (copper transporter), member 1
hg19_v2_chr1_-_21377447_21377487	0.0253637	UUGUUCG	ENST00000374937.3|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3 	ENST00000264211.8|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3
hg19_v2_chr2_+_242641442_242641478	0.0249311	UUGUUCG	ENST00000313552.6|ING5|ENSG00000168395.10|inhibitor of growth family, member 5 	ENST00000406941.1|ING5|ENSG00000168395.10|inhibitor of growth family, member 5
hg19_v2_chr4_-_40631859_40631889	0.0243409	UUGUUCG	ENST00000295971.7|RBM47|ENSG00000163694.10|RNA binding motif protein 47 	ENST00000319592.4|RBM47|ENSG00000163694.10|RNA binding motif protein 47
hg19_v2_chr1_+_2985760_2985775	0.0241039	UUGUUCG	ENST00000378391.2|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000514189.1|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000270722.5|PRDM16|ENSG00000142611.12|PR domain containing 16
hg19_v2_chr7_-_105517021_105517050	0.0232644	UUGUUCG	ENST00000318724.4|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1 	ENST00000419735.3|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr3_-_135914615_135914701	0.0230275	UUGUUCG	ENST00000309993.2|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr10_+_45455207_45455279	0.0224726	UUGUUCG	ENST00000334940.6|RASSF4|ENSG00000107551.16|Ras association (RalGDS/AF-6) domain family member 4 	ENST00000374417.2|RASSF4|ENSG00000107551.16|Ras association (RalGDS/AF-6) domain family member 4 	ENST00000340258.5|RASSF4|ENSG00000107551.16|Ras association (RalGDS/AF-6) domain family member 4 	ENST00000427758.1|RASSF4|ENSG00000107551.16|Ras association (RalGDS/AF-6) domain family member 4
hg19_v2_chr9_-_135819987_135820020	0.0219276	UUGUUCG	ENST00000298552.3|TSC1|ENSG00000165699.9|tuberous sclerosis 1 	ENST00000403810.1|TSC1|ENSG00000165699.9|tuberous sclerosis 1
hg19_v2_chr13_+_51483814_51483935	0.0218901	UUGUUCG	ENST00000336617.3|RNASEH2B|ENSG00000136104.14|ribonuclease H2, subunit B 	ENST00000422660.1|RNASEH2B|ENSG00000136104.14|ribonuclease H2, subunit B
hg19_v2_chr16_+_56965960_56966072	0.021536	UUGUUCG	ENST00000439977.2|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 	ENST00000344114.4|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 	ENST00000300302.5|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 	ENST00000379792.2|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg19_v2_chr17_-_60142609_60142657	0.0213998	UUGUUCG	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chr7_+_139026057_139026130	0.0210394	UUGUUCG	ENST00000541515.3|LUC7L2|ENSG00000269955.2|LUC7-like 2 (S. cerevisiae)
hg19_v2_chr8_+_61591337_61591393	0.0205777	UUGUUCG	ENST00000423902.2|CHD7|ENSG00000171316.7|chromodomain helicase DNA binding protein 7
hg19_v2_chr12_-_51477333_51477426	0.0202172	UUGUUCG	ENST00000228515.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000548206.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000546935.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000548981.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2
hg19_v2_chr2_+_155554797_155554837	0.0200928	UUGUUCG	ENST00000295101.2|KCNJ3|ENSG00000162989.3|potassium inwardly-rectifying channel, subfamily J, member 3
hg19_v2_chr2_-_74405929_74406028	0.0199	UUGUUCG	ENST00000396049.4|MOB1A|ENSG00000114978.13|MOB kinase activator 1A
hg19_v2_chr6_-_91006461_91006517	0.0196818	UUGUUCG	ENST00000257749.4|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2 	ENST00000343122.3|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2 	ENST00000406998.2|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2 	ENST00000453877.1|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg19_v2_chr9_+_4679555_4679617	0.019312	UUGUUCG	ENST00000381858.1|CDC37L1|ENSG00000106993.7|cell division cycle 37-like 1 	ENST00000381854.3|CDC37L1|ENSG00000106993.7|cell division cycle 37-like 1
hg19_v2_chr14_-_68283291_68283323	0.0183699	UUGUUCG	ENST00000555452.1|ZFYVE26|ENSG00000072121.11|zinc finger, FYVE domain containing 26 	ENST00000347230.4|ZFYVE26|ENSG00000072121.11|zinc finger, FYVE domain containing 26
hg19_v2_chr10_-_126849068_126849138	0.0172698	UUGUUCG	ENST00000494626.2|CTBP2|ENSG00000175029.12|C-terminal binding protein 2 	ENST00000337195.5|CTBP2|ENSG00000175029.12|C-terminal binding protein 2
hg19_v2_chr3_-_151176497_151176497	0.0155138	UUGUUCG	ENST00000282466.3|IGSF10|ENSG00000152580.8|immunoglobulin superfamily, member 10
hg19_v2_chr8_-_38386175_38386180	0.0152496	UUGUUCG	ENST00000437935.2|C8orf86|ENSG00000196166.3|chromosome 8 open reading frame 86 	ENST00000358138.1|C8orf86|ENSG00000196166.3|chromosome 8 open reading frame 86
hg19_v2_chr5_-_56247935_56247959	0.0152108	UUGUUCG	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr2_+_46926048_46926095	0.0151174	UUGUUCG	ENST00000306503.5|SOCS5|ENSG00000171150.7|suppressor of cytokine signaling 5
hg19_v2_chr18_+_32558208_32558340	0.0150471	UUGUUCG	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr17_-_1465924_1466129	0.0150421	UUGUUCG	ENST00000573231.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000576722.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000576761.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000576010.2|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000313486.7|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha 	ENST00000539476.1|PITPNA|ENSG00000174238.10|phosphatidylinositol transfer protein, alpha
hg19_v2_chr9_-_16870704_16870841	0.0147479	UUGUUCG	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr1_-_205601064_205601090	0.0145218	UUGUUCG	ENST00000357992.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1) 	ENST00000289703.4|ELK4|ENSG00000158711.9|ELK4, ETS-domain protein (SRF accessory protein 1)
hg19_v2_chr9_-_21335356_21335411	0.0142298	UUGUUCG	ENST00000359039.4|KLHL9|ENSG00000198642.5|kelch-like family member 9
hg19_v2_chr1_-_67896095_67896106	0.0142037	UUGUUCG	ENST00000370994.4|SERBP1|ENSG00000142864.10|SERPINE1 mRNA binding protein 1
hg19_v2_chr12_-_51420128_51420183	0.0140685	UUGUUCG	ENST00000262051.7|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 	ENST00000547732.1|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 	ENST00000262052.5|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 	ENST00000546488.1|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 	ENST00000550714.1|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 	ENST00000548193.1|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 	ENST00000547579.1|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2 	ENST00000546743.1|SLC11A2|ENSG00000110911.10|solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2
hg19_v2_chr3_+_137483579_137483579	0.013944	UUGUUCG	ENST00000306087.1|SOX14|ENSG00000168875.1|SRY (sex determining region Y)-box 14
hg19_v2_chr8_-_101965146_101965236	0.013826	UUGUUCG	ENST00000395957.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000395948.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000457309.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr12_-_14133053_14133159	0.0136364	UUGUUCG	ENST00000609686.1|GRIN2B|ENSG00000273079.1|glutamate receptor, ionotropic, N-methyl D-aspartate 2B
hg19_v2_chr4_-_141677267_141677291	0.0132542	UUGUUCG	ENST00000442267.2|TBC1D9|ENSG00000109436.7|TBC1 domain family, member 9 (with GRAM domain)
hg19_v2_chr1_-_152332480_152332484	0.0130579	UUGUUCG	ENST00000388718.5|FLG2|ENSG00000143520.6|filaggrin family member 2
hg19_v2_chr17_+_77751931_77752014	0.0128001	UUGUUCG	ENST00000310942.4|CBX2|ENSG00000173894.6|chromobox homolog 2 	ENST00000269399.5|CBX2|ENSG00000173894.6|chromobox homolog 2
hg19_v2_chr8_+_125551338_125551425	0.0127074	UUGUUCG	ENST00000276689.3|NDUFB9|ENSG00000147684.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa 	ENST00000518008.1|NDUFB9|ENSG00000147684.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa 	ENST00000522532.1|NDUFB9|ENSG00000147684.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa 	ENST00000517367.1|NDUFB9|ENSG00000147684.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa
hg19_v2_chr11_+_68080077_68080127	0.0125212	UUGUUCG	ENST00000294304.7|LRP5|ENSG00000162337.7|low density lipoprotein receptor-related protein 5
hg19_v2_chr17_+_27369918_27370010	0.0122866	UUGUUCG	ENST00000323372.4|PIPOX|ENSG00000179761.7|pipecolic acid oxidase
hg19_v2_chr6_-_16761678_16761721	0.0121982	UUGUUCG	ENST00000244769.4|ATXN1|ENSG00000124788.13|ataxin 1 	ENST00000436367.1|ATXN1|ENSG00000124788.13|ataxin 1
hg19_v2_chr5_-_59189545_59189625	0.0112299	UUGUUCG	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr8_-_116681221_116681236	0.0111109	UUGUUCG	ENST00000395715.3|TRPS1|ENSG00000104447.7|trichorhinophalangeal syndrome I
hg19_v2_chr13_-_72441315_72441454	0.0107092	UUGUUCG	ENST00000305425.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000313174.7|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila) 	ENST00000354591.4|DACH1|ENSG00000165659.12|dachshund homolog 1 (Drosophila)
hg19_v2_chr7_+_92158083_92158131	0.0105486	UUGUUCG	ENST00000265732.5|RBM48|ENSG00000127993.10|RNA binding motif protein 48 	ENST00000481551.1|RBM48|ENSG00000127993.10|RNA binding motif protein 48 	ENST00000496410.1|RBM48|ENSG00000127993.10|RNA binding motif protein 48
hg19_v2_chr5_+_138629417_138629467	0.0103388	UUGUUCG	ENST00000510056.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000511249.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000503811.1|MATR3|ENSG00000015479.13|matrin 3 	ENST00000511378.1|MATR3|ENSG00000015479.13|matrin 3
hg19_v2_chr15_+_57210818_57210930	0.00976019	UUGUUCG	ENST00000438423.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000267811.5|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000452095.2|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000559609.1|TCF12|ENSG00000140262.13|transcription factor 12 	ENST00000333725.5|TCF12|ENSG00000140262.13|transcription factor 12
hg19_v2_chrX_-_49056635_49056718	0.00943689	UUGUUCG	ENST00000472598.1|SYP|ENSG00000102003.6|synaptophysin 	ENST00000538567.1|SYP|ENSG00000102003.6|synaptophysin 	ENST00000479808.1|SYP|ENSG00000102003.6|synaptophysin 	ENST00000263233.4|SYP|ENSG00000102003.6|synaptophysin
hg19_v2_chr1_+_110009215_110009250	0.008931	UUGUUCG	ENST00000369872.3|SYPL2|ENSG00000143028.7|synaptophysin-like 2
hg19_v2_chr15_+_68346501_68346550	0.00858653	UUGUUCG	ENST00000249636.6|PIAS1|ENSG00000033800.9|protein inhibitor of activated STAT, 1
hg19_v2_chr4_+_184020398_184020463	0.00823851	UUGUUCG	ENST00000403733.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2 	ENST00000378925.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2
hg19_v2_chr8_+_106330920_106330979	0.00723341	UUGUUCG	ENST00000407775.2|ZFPM2|ENSG00000169946.9|zinc finger protein, FOG family member 2
hg19_v2_chr8_-_117768023_117768069	0.00705487	UUGUUCG	ENST00000518949.1|EIF3H|ENSG00000147677.6|eukaryotic translation initiation factor 3, subunit H 	ENST00000522453.1|EIF3H|ENSG00000147677.6|eukaryotic translation initiation factor 3, subunit H 	ENST00000521861.1|EIF3H|ENSG00000147677.6|eukaryotic translation initiation factor 3, subunit H 	ENST00000518995.1|EIF3H|ENSG00000147677.6|eukaryotic translation initiation factor 3, subunit H
hg19_v2_chr15_-_25684110_25684212	0.00683517	UUGUUCG	ENST00000232165.3|UBE3A|ENSG00000114062.13|ubiquitin protein ligase E3A
hg19_v2_chr19_+_16607122_16607274	0.00679134	UUGUUCG	ENST00000221671.3|C19orf44|ENSG00000105072.4|chromosome 19 open reading frame 44 	ENST00000594035.1|C19orf44|ENSG00000105072.4|chromosome 19 open reading frame 44 	ENST00000599550.1|C19orf44|ENSG00000105072.4|chromosome 19 open reading frame 44 	ENST00000594813.1|C19orf44|ENSG00000105072.4|chromosome 19 open reading frame 44
hg19_v2_chr7_+_139044621_139044725	0.00669878	UUGUUCG	ENST00000354926.4|C7orf55-LUC7L2|ENSG00000146963.13|C7orf55-LUC7L2 readthrough
hg19_v2_chr12_-_120806960_120806985	0.00657136	UUGUUCG	ENST00000257552.2|MSI1|ENSG00000135097.2|musashi RNA-binding protein 1
hg19_v2_chr2_-_228028829_228028858	0.00612008	UUGUUCG	ENST00000396625.3|COL4A4|ENSG00000081052.10|collagen, type IV, alpha 4 	ENST00000329662.7|COL4A4|ENSG00000081052.10|collagen, type IV, alpha 4
hg19_v2_chr19_+_34919257_34919332	0.0060291	UUGUUCG	ENST00000246548.4|UBA2|ENSG00000126261.8|ubiquitin-like modifier activating enzyme 2 	ENST00000590048.2|UBA2|ENSG00000126261.8|ubiquitin-like modifier activating enzyme 2
hg19_v2_chr10_+_102222798_102222798	0.00569778	UUGUUCG	ENST00000343737.5|WNT8B|ENSG00000075290.7|wingless-type MMTV integration site family, member 8B
hg19_v2_chr8_+_120220561_120220650	0.00526204	UUGUUCG	ENST00000276681.6|MAL2|ENSG00000147676.9|mal, T-cell differentiation protein 2 (gene/pseudogene)
hg19_v2_chr8_+_77593448_77593471	0.00498028	UUGUUCG	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr19_-_18392422_18392440	0.0047807	UUGUUCG	ENST00000252818.3|JUND|ENSG00000130522.4|jun D proto-oncogene
hg19_v2_chr1_+_15853308_15853413	0.00457383	UUGUUCG	ENST00000375838.1|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENST00000375847.3|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENST00000375849.1|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16
hg19_v2_chr1_+_43148059_43148111	0.00412572	UUGUUCG	ENST00000321358.7|YBX1|ENSG00000065978.13|Y box binding protein 1 	ENST00000332220.6|YBX1|ENSG00000065978.13|Y box binding protein 1
hg19_v2_chr3_+_16216137_16216203	0.00405069	UUGUUCG	ENST00000339732.5|GALNT15|ENSG00000131386.13|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 15
hg19_v2_chr14_-_30396948_30396998	0.00327819	UUGUUCG	ENST00000331968.5|PRKD1|ENSG00000184304.10|protein kinase D1
hg19_v2_chr3_+_88199099_88199154	0.0032304	UUGUUCG	ENST00000486971.1|C3orf38|ENSG00000179021.5|chromosome 3 open reading frame 38
hg19_v2_chr9_-_100935043_100935166	0.00261157	UUGUUCG	ENST00000343933.5|CORO2A|ENSG00000106789.8|coronin, actin binding protein, 2A
hg19_v2_chr15_+_41709302_41709348	0.00183818	UUGUUCG	ENST00000389629.4|RTF1|ENSG00000137815.10|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
hg19_v2_chrX_+_56259316_56259480	0.00171572	UUGUUCG	ENST00000468660.1|KLF8|ENSG00000102349.10|Kruppel-like factor 8
hg19_v2_chr17_-_617949_618107	0.00170808	UUGUUCG	ENST00000401468.3|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000574029.1|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000291074.5|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000571805.1|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000437048.2|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae) 	ENST00000446250.2|VPS53|ENSG00000141252.15|vacuolar protein sorting 53 homolog (S. cerevisiae)
hg19_v2_chr1_+_66999799_66999965	0.000849921	UUGUUCG	ENST00000371035.3|SGIP1|ENSG00000118473.17|SH3-domain GRB2-like (endophilin) interacting protein 1 	ENST00000371036.3|SGIP1|ENSG00000118473.17|SH3-domain GRB2-like (endophilin) interacting protein 1 	ENST00000371037.4|SGIP1|ENSG00000118473.17|SH3-domain GRB2-like (endophilin) interacting protein 1
hg19_v2_chr3_+_152017181_152017229	0.000467792	UUGUUCG	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chrX_+_154997474_154997474	0.000379872	UUGUUCG	ENST00000302805.2|SPRY3|ENSG00000168939.6|sprouty homolog 3 (Drosophila)
