hg19_v2_chr6_-_132272504_132272519	3.30497	UUGGUCC	ENST00000367976.3|CTGF|ENSG00000118523.5|connective tissue growth factor
hg19_v2_chr1_-_22469459_22469541	1.40195	UUGGUCC	ENST00000290167.6|WNT4|ENSG00000162552.10|wingless-type MMTV integration site family, member 4
hg19_v2_chr6_+_19837592_19837621	1.35549	UUGGUCC	ENST00000378700.3|ID4|ENSG00000172201.6|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein
hg19_v2_chr5_+_75699040_75699090	1.31338	UUGGUCC	ENST00000274364.6|IQGAP2|ENSG00000145703.11|IQ motif containing GTPase activating protein 2
hg19_v2_chr16_+_58549378_58549392	1.24773	UUGGUCC	ENST00000310682.2|SETD6|ENSG00000103037.7|SET domain containing 6 	ENST00000394266.4|SETD6|ENSG00000103037.7|SET domain containing 6 	ENST00000219315.4|SETD6|ENSG00000103037.7|SET domain containing 6
hg19_v2_chr7_+_121513143_121513153	1.19872	UUGGUCC	ENST00000393386.2|PTPRZ1|ENSG00000106278.7|protein tyrosine phosphatase, receptor-type, Z polypeptide 1
hg19_v2_chrY_+_15016725_15016769	1.17559	UUGGUCC	ENST00000336079.3|DDX3Y|ENSG00000067048.12|DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
hg19_v2_chr8_+_17354587_17354610	1.14973	UUGGUCC	ENST00000494857.1|SLC7A2|ENSG00000003989.12|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 	ENST00000522656.1|SLC7A2|ENSG00000003989.12|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
hg19_v2_chr12_-_63328817_63328870	1.07578	UUGGUCC	ENST00000228705.6|PPM1H|ENSG00000111110.7|protein phosphatase, Mg2+/Mn2+ dependent, 1H
hg19_v2_chr1_+_118148556_118148681	0.999395	UUGGUCC	ENST00000369448.3|FAM46C|ENSG00000183508.4|family with sequence similarity 46, member C
hg19_v2_chr7_+_100728720_100728803	0.966596	UUGGUCC	ENST00000306085.6|TRIM56|ENSG00000169871.8|tripartite motif containing 56 	ENST00000412507.1|TRIM56|ENSG00000169871.8|tripartite motif containing 56
hg19_v2_chr5_+_76506706_76506787	0.958771	UUGGUCC	ENST00000340978.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000346042.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000264917.5|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000342343.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000333194.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B
hg19_v2_chr17_+_53342311_53342400	0.904007	UUGGUCC	ENST00000226067.5|HLF|ENSG00000108924.9|hepatic leukemia factor
hg19_v2_chr1_-_217262969_217262995	0.85132	UUGGUCC	ENST00000361525.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr3_-_114790179_114790222	0.792888	UUGGUCC	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr7_+_91570165_91570197	0.792303	UUGGUCC	ENST00000356239.3|AKAP9|ENSG00000127914.12|A kinase (PRKA) anchor protein 9 	ENST00000359028.2|AKAP9|ENSG00000127914.12|A kinase (PRKA) anchor protein 9 	ENST00000358100.2|AKAP9|ENSG00000127914.12|A kinase (PRKA) anchor protein 9
hg19_v2_chr9_-_20622478_20622542	0.777248	UUGGUCC	ENST00000355930.6|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 	ENST00000380338.4|MLLT3|ENSG00000171843.11|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
hg19_v2_chr8_+_81397876_81397902	0.762134	UUGGUCC	ENST00000430430.1|ZBTB10|ENSG00000205189.7|zinc finger and BTB domain containing 10
hg19_v2_chr16_+_69599861_69599887	0.752952	UUGGUCC	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr1_+_61547894_61547980	0.738713	UUGGUCC	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr6_+_24495067_24495096	0.715387	UUGGUCC	ENST00000357578.3|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1 	ENST00000546278.1|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1 	ENST00000491546.1|ALDH5A1|ENSG00000112294.8|aldehyde dehydrogenase 5 family, member A1
hg19_v2_chr6_+_107811162_107811196	0.713298	UUGGUCC	ENST00000317357.5|SOBP|ENSG00000112320.7|sine oculis binding protein homolog (Drosophila)
hg19_v2_chrX_+_95939711_95939786	0.685502	UUGGUCC	ENST00000373049.4|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2 	ENST00000324765.8|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2
hg19_v2_chr17_-_1928621_1928641	0.684561	UUGGUCC	ENST00000331238.6|RTN4RL1|ENSG00000185924.6|reticulon 4 receptor-like 1
hg19_v2_chr17_+_57408994_57409088	0.684414	UUGGUCC	ENST00000312655.4|YPEL2|ENSG00000175155.4|yippee-like 2 (Drosophila)
hg19_v2_chrX_+_9431324_9431371	0.677688	UUGGUCC	ENST00000407597.2|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000424279.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000536365.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000441088.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000380961.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000415293.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked
hg19_v2_chr12_-_39837192_39837206	0.673994	UUGGUCC	ENST00000361961.3|KIF21A|ENSG00000139116.13|kinesin family member 21A 	ENST00000395670.3|KIF21A|ENSG00000139116.13|kinesin family member 21A
hg19_v2_chr16_+_50775948_50775961	0.668122	UUGGUCC	ENST00000569681.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000569418.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000540145.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome)
hg19_v2_chr19_-_14316980_14316999	0.656473	UUGGUCC	ENST00000361434.3|LPHN1|ENSG00000072071.12|latrophilin 1 	ENST00000340736.6|LPHN1|ENSG00000072071.12|latrophilin 1
hg19_v2_chr12_-_56652111_56652183	0.643443	UUGGUCC	ENST00000267116.7|ANKRD52|ENSG00000139645.9|ankyrin repeat domain 52
hg19_v2_chr2_+_191273052_191273121	0.632527	UUGGUCC	ENST00000417958.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000432036.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000392328.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6
hg19_v2_chr14_-_25519095_25519280	0.626975	UUGGUCC	ENST00000419632.2|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn) 	ENST00000358326.2|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn) 	ENST00000396700.1|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn) 	ENST00000548724.1|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn)
hg19_v2_chr19_-_7293942_7294045	0.626694	UUGGUCC	ENST00000341500.5|INSR|ENSG00000171105.9|insulin receptor 	ENST00000302850.5|INSR|ENSG00000171105.9|insulin receptor
hg19_v2_chr6_-_134639180_134639220	0.624773	UUGGUCC	ENST00000367858.5|SGK1|ENSG00000118515.7|serum/glucocorticoid regulated kinase 1
hg19_v2_chr14_-_90085458_90085557	0.6105	UUGGUCC	ENST00000345097.4|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555855.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555353.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr7_+_102073966_102074072	0.599411	UUGGUCC	ENST00000495936.1|ORAI2|ENSG00000160991.11|ORAI calcium release-activated calcium modulator 2 	ENST00000356387.2|ORAI2|ENSG00000160991.11|ORAI calcium release-activated calcium modulator 2 	ENST00000478730.2|ORAI2|ENSG00000160991.11|ORAI calcium release-activated calcium modulator 2 	ENST00000468241.1|ORAI2|ENSG00000160991.11|ORAI calcium release-activated calcium modulator 2 	ENST00000403646.3|ORAI2|ENSG00000160991.11|ORAI calcium release-activated calcium modulator 2
hg19_v2_chr3_-_15901278_15901354	0.591641	UUGGUCC	ENST00000399451.2|ANKRD28|ENSG00000206560.6|ankyrin repeat domain 28
hg19_v2_chrX_-_129402857_129402880	0.578405	UUGGUCC	ENST00000447817.1|ZNF280C|ENSG00000056277.11|zinc finger protein 280C 	ENST00000370978.4|ZNF280C|ENSG00000056277.11|zinc finger protein 280C
hg19_v2_chr22_+_29279552_29279586	0.550763	UUGGUCC	ENST00000544604.2|ZNRF3|ENSG00000183579.11|zinc and ring finger 3
hg19_v2_chr22_-_17602200_17602265	0.542747	UUGGUCC	ENST00000399875.1|CECR6|ENSG00000183307.3|cat eye syndrome chromosome region, candidate 6
hg19_v2_chr9_+_2015335_2015374	0.526236	UUGGUCC	ENST00000349721.2|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENST00000357248.2|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 	ENST00000450198.1|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
hg19_v2_chr4_-_140098339_140098392	0.502678	UUGGUCC	ENST00000394235.2|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor)
hg19_v2_chr4_-_39640700_39640712	0.492005	UUGGUCC	ENST00000295958.5|SMIM14|ENSG00000163683.7|small integral membrane protein 14
hg19_v2_chr11_-_75062730_75062775	0.487843	UUGGUCC	ENST00000420843.2|ARRB1|ENSG00000137486.12|arrestin, beta 1 	ENST00000360025.3|ARRB1|ENSG00000137486.12|arrestin, beta 1
hg19_v2_chr8_+_67039131_67039176	0.482581	UUGGUCC	ENST00000315962.4|TRIM55|ENSG00000147573.12|tripartite motif containing 55 	ENST00000353317.5|TRIM55|ENSG00000147573.12|tripartite motif containing 55
hg19_v2_chr2_-_16847084_16847110	0.47948	UUGGUCC	ENST00000406434.1|FAM49A|ENSG00000197872.7|family with sequence similarity 49, member A 	ENST00000381323.3|FAM49A|ENSG00000197872.7|family with sequence similarity 49, member A
hg19_v2_chr7_+_30951461_30951474	0.475239	UUGGUCC	ENST00000311813.4|AQP1|ENSG00000240583.6|aquaporin 1 (Colton blood group)
hg19_v2_chr14_+_89029253_89029318	0.458844	UUGGUCC	ENST00000251038.5|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14 	ENST00000359301.3|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14 	ENST00000302216.8|ZC3H14|ENSG00000100722.14|zinc finger CCCH-type containing 14
hg19_v2_chr6_+_72596604_72596727	0.450444	UUGGUCC	ENST00000348717.5|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000517960.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000518273.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000522291.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000521978.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000520567.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000264839.7|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr8_-_72268889_72268955	0.446804	UUGGUCC	ENST00000388742.4|EYA1|ENSG00000104313.13|eyes absent homolog 1 (Drosophila)
hg19_v2_chr4_+_108745711_108745726	0.442243	UUGGUCC	ENST00000394684.4|SGMS2|ENSG00000164023.10|sphingomyelin synthase 2
hg19_v2_chr1_-_35395178_35395265	0.439039	UUGGUCC	ENST00000373347.1|DLGAP3|ENSG00000116544.7|discs, large (Drosophila) homolog-associated protein 3
hg19_v2_chr1_+_213031570_213031597	0.412746	UUGGUCC	ENST00000366971.4|FLVCR1|ENSG00000162769.8|feline leukemia virus subgroup C cellular receptor 1
hg19_v2_chr1_+_27561007_27561061	0.410397	UUGGUCC	ENST00000319394.3|WDTC1|ENSG00000142784.11|WD and tetratricopeptide repeats 1
hg19_v2_chr22_+_29168652_29168770	0.406004	UUGGUCC	ENST00000249064.4|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117 	ENST00000444523.1|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117 	ENST00000448492.2|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117 	ENST00000421503.2|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117
hg19_v2_chr15_-_37390482_37390572	0.399266	UUGGUCC	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chrX_-_25034065_25034088	0.396776	UUGGUCC	ENST00000379044.4|ARX|ENSG00000004848.6|aristaless related homeobox
hg19_v2_chr10_-_1779663_1779676	0.382234	UUGGUCC	ENST00000381312.1|ADARB2|ENSG00000185736.11|adenosine deaminase, RNA-specific, B2 (non-functional)
hg19_v2_chr6_+_1312675_1312701	0.381956	UUGGUCC	ENST00000296839.2|FOXQ1|ENSG00000164379.4|forkhead box Q1
hg19_v2_chr1_-_205180664_205180727	0.381603	UUGGUCC	ENST00000367161.3|DSTYK|ENSG00000133059.12|dual serine/threonine and tyrosine protein kinase 	ENST00000367162.3|DSTYK|ENSG00000133059.12|dual serine/threonine and tyrosine protein kinase 	ENST00000367160.4|DSTYK|ENSG00000133059.12|dual serine/threonine and tyrosine protein kinase
hg19_v2_chr2_+_179345173_179345221	0.379556	UUGGUCC	ENST00000234453.5|PLEKHA3|ENSG00000116095.6|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
hg19_v2_chr17_+_29718642_29718656	0.374432	UUGGUCC	ENST00000325874.8|RAB11FIP4|ENSG00000131242.11|RAB11 family interacting protein 4 (class II)
hg19_v2_chr16_+_58059470_58059470	0.367603	UUGGUCC	ENST00000219271.3|MMP15|ENSG00000102996.4|matrix metallopeptidase 15 (membrane-inserted)
hg19_v2_chr3_+_14444063_14444133	0.366388	UUGGUCC	ENST00000454876.2|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6 	ENST00000360861.3|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6 	ENST00000416216.2|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6
hg19_v2_chr10_-_104474128_104474209	0.361912	UUGGUCC	ENST00000260746.5|ARL3|ENSG00000138175.8|ADP-ribosylation factor-like 3
hg19_v2_chr6_-_52926539_52926668	0.354963	UUGGUCC	ENST00000350082.5|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase 	ENST00000356971.3|ICK|ENSG00000112144.11|intestinal cell (MAK-like) kinase
hg19_v2_chr12_-_42538657_42538720	0.353371	UUGGUCC	ENST00000398675.3|GXYLT1|ENSG00000151233.6|glucoside xylosyltransferase 1
hg19_v2_chr4_+_6784401_6784510	0.343766	UUGGUCC	ENST00000425103.1|KIAA0232|ENSG00000170871.7|KIAA0232 	ENST00000307659.5|KIAA0232|ENSG00000170871.7|KIAA0232
hg19_v2_chr10_+_60272814_60272900	0.343171	UUGGUCC	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr7_+_43152191_43152211	0.342674	UUGGUCC	ENST00000395891.2|HECW1|ENSG00000002746.10|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1
hg19_v2_chr13_+_98794810_98794826	0.340742	UUGGUCC	ENST00000595437.1|FARP1|ENSG00000152767.11|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
hg19_v2_chr5_+_43121698_43121786	0.340083	UUGGUCC	ENST00000505606.2|ZNF131|ENSG00000172262.7|zinc finger protein 131 	ENST00000509634.1|ZNF131|ENSG00000172262.7|zinc finger protein 131 	ENST00000509341.1|ZNF131|ENSG00000172262.7|zinc finger protein 131
hg19_v2_chr1_+_201979645_201979721	0.337778	UUGGUCC	ENST00000367284.5|ELF3|ENSG00000163435.11|E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 	ENST00000367283.3|ELF3|ENSG00000163435.11|E74-like factor 3 (ets domain transcription factor, epithelial-specific )
hg19_v2_chr1_-_212004090_212004168	0.337004	UUGGUCC	ENST00000366997.4|LPGAT1|ENSG00000123684.8|lysophosphatidylglycerol acyltransferase 1
hg19_v2_chr1_-_149900122_149900236	0.334448	UUGGUCC	ENST00000271628.8|SF3B4|ENSG00000143368.9|splicing factor 3b, subunit 4, 49kDa
hg19_v2_chr7_-_152133059_152133102	0.333581	UUGGUCC	ENST00000262189.6|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C 	ENST00000355193.2|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C
hg19_v2_chr17_+_38296576_38296604	0.331296	UUGGUCC	ENST00000264645.7|CASC3|ENSG00000108349.10|cancer susceptibility candidate 3
hg19_v2_chr11_+_76777979_76778027	0.329997	UUGGUCC	ENST00000531028.1|CAPN5|ENSG00000149260.10|calpain 5 	ENST00000278559.3|CAPN5|ENSG00000149260.10|calpain 5 	ENST00000527066.1|CAPN5|ENSG00000149260.10|calpain 5 	ENST00000529629.1|CAPN5|ENSG00000149260.10|calpain 5
hg19_v2_chr3_-_52931557_52931623	0.327494	UUGGUCC	ENST00000504329.1|TMEM110-MUSTN1|ENSG00000248592.3|TMEM110-MUSTN1 readthrough 	ENST00000355083.5|TMEM110|ENSG00000213533.7|transmembrane protein 110
hg19_v2_chr18_+_9136758_9136852	0.326795	UUGGUCC	ENST00000383440.2|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000262126.4|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000577992.1|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12
hg19_v2_chr17_-_6459768_6459799	0.324738	UUGGUCC	ENST00000421306.3|PITPNM3|ENSG00000091622.11|PITPNM family member 3
hg19_v2_chr6_+_133562472_133562556	0.32384	UUGGUCC	ENST00000430974.2|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000367895.5|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355167.3|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355286.6|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila)
hg19_v2_chr17_+_8152590_8152660	0.323724	UUGGUCC	ENST00000584044.1|PFAS|ENSG00000178921.9|phosphoribosylformylglycinamidine synthase 	ENST00000314666.6|PFAS|ENSG00000178921.9|phosphoribosylformylglycinamidine synthase 	ENST00000545834.1|PFAS|ENSG00000178921.9|phosphoribosylformylglycinamidine synthase 	ENST00000581242.1|PFAS|ENSG00000178921.9|phosphoribosylformylglycinamidine synthase
hg19_v2_chr6_-_17706618_17706666	0.314549	UUGGUCC	ENST00000262077.2|NUP153|ENSG00000124789.7|nucleoporin 153kDa 	ENST00000537253.1|NUP153|ENSG00000124789.7|nucleoporin 153kDa
hg19_v2_chr7_+_55433131_55433142	0.31439	UUGGUCC	ENST00000254770.2|LANCL2|ENSG00000132434.5|LanC lantibiotic synthetase component C-like 2 (bacterial)
hg19_v2_chr6_-_46138676_46138726	0.301799	UUGGUCC	ENST00000371383.2|ENPP5|ENSG00000112796.5|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 	ENST00000230565.3|ENPP5|ENSG00000112796.5|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)
hg19_v2_chr6_-_166075557_166075588	0.290605	UUGGUCC	ENST00000539869.2|PDE10A|ENSG00000112541.9|phosphodiesterase 10A 	ENST00000366882.1|PDE10A|ENSG00000112541.9|phosphodiesterase 10A
hg19_v2_chr10_+_69644404_69644427	0.289516	UUGGUCC	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr6_-_26659913_26659982	0.28468	UUGGUCC	ENST00000480036.1|ZNF322|ENSG00000181315.6|zinc finger protein 322 	ENST00000415922.2|ZNF322|ENSG00000181315.6|zinc finger protein 322
hg19_v2_chr9_+_36190853_36190904	0.279265	UUGGUCC	ENST00000433436.2|CLTA|ENSG00000122705.12|clathrin, light chain A 	ENST00000538225.1|CLTA|ENSG00000122705.12|clathrin, light chain A 	ENST00000540080.1|CLTA|ENSG00000122705.12|clathrin, light chain A
hg19_v2_chr11_+_61520075_61520136	0.275573	UUGGUCC	ENST00000278836.5|MYRF|ENSG00000124920.9|myelin regulatory factor
hg19_v2_chr2_+_232573208_232573219	0.272676	UUGGUCC	ENST00000409115.3|PTMA|ENSG00000187514.10|prothymosin, alpha
hg19_v2_chr4_+_86396265_86396276	0.270997	UUGGUCC	ENST00000395184.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr3_+_33318914_33318985	0.261575	UUGGUCC	ENST00000484457.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000538892.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000538181.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000446237.3|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2 	ENST00000507198.1|FBXL2|ENSG00000153558.9|F-box and leucine-rich repeat protein 2
hg19_v2_chr21_+_44394620_44394737	0.260821	UUGGUCC	ENST00000291547.5|PKNOX1|ENSG00000160199.10|PBX/knotted 1 homeobox 1
hg19_v2_chr1_+_32645269_32645292	0.260778	UUGGUCC	ENST00000373610.3|TXLNA|ENSG00000084652.11|taxilin alpha
hg19_v2_chr6_+_117198400_117198441	0.259294	UUGGUCC	ENST00000332958.2|RFX6|ENSG00000185002.5|regulatory factor X, 6
hg19_v2_chr2_+_64751433_64751472	0.257346	UUGGUCC	ENST00000238856.4|AFTPH|ENSG00000119844.10|aftiphilin 	ENST00000422803.1|AFTPH|ENSG00000119844.10|aftiphilin 	ENST00000238855.7|AFTPH|ENSG00000119844.10|aftiphilin
hg19_v2_chr2_-_148778258_148778319	0.255064	UUGGUCC	ENST00000392857.5|ORC4|ENSG00000115947.9|origin recognition complex, subunit 4 	ENST00000457954.1|ORC4|ENSG00000115947.9|origin recognition complex, subunit 4 	ENST00000392858.1|ORC4|ENSG00000115947.9|origin recognition complex, subunit 4 	ENST00000542387.1|ORC4|ENSG00000115947.9|origin recognition complex, subunit 4
hg19_v2_chr2_-_85555385_85555548	0.252417	UUGGUCC	ENST00000377386.3|TGOLN2|ENSG00000152291.9|trans-golgi network protein 2
hg19_v2_chr1_-_51984908_51984952	0.248448	UUGGUCC	ENST00000371730.2|EPS15|ENSG00000085832.12|epidermal growth factor receptor pathway substrate 15
hg19_v2_chr9_-_127533519_127533576	0.246768	UUGGUCC	ENST00000487099.2|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000344523.4|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000373584.3|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1
hg19_v2_chr17_+_61699766_61699826	0.246615	UUGGUCC	ENST00000579585.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000584573.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361733.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361357.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3
hg19_v2_chr10_-_98346801_98346812	0.242509	UUGGUCC	ENST00000371142.4|TM9SF3|ENSG00000077147.10|transmembrane 9 superfamily member 3
hg19_v2_chr3_+_150804676_150804697	0.240263	UUGGUCC	ENST00000474524.1|MED12L|ENSG00000144893.8|mediator complex subunit 12-like 	ENST00000273432.4|MED12L|ENSG00000144893.8|mediator complex subunit 12-like
hg19_v2_chr19_-_10444188_10444316	0.235801	UUGGUCC	ENST00000293677.6|RAVER1|ENSG00000161847.9|ribonucleoprotein, PTB-binding 1
hg19_v2_chr14_-_78083112_78083140	0.233101	UUGGUCC	ENST00000216484.2|SPTLC2|ENSG00000100596.2|serine palmitoyltransferase, long chain base subunit 2
hg19_v2_chr7_+_114055052_114055378	0.233015	UUGGUCC	ENST00000462331.1|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000408937.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000403559.4|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000350908.4|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393498.2|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393495.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000378237.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393489.3|FOXP2|ENSG00000128573.18|forkhead box P2
hg19_v2_chr16_+_50187556_50187779	0.227437	UUGGUCC	ENST00000561678.1|PAPD5|ENSG00000121274.8|PAP associated domain containing 5 	ENST00000357464.3|PAPD5|ENSG00000121274.8|PAP associated domain containing 5
hg19_v2_chr12_+_124457746_124457842	0.226384	UUGGUCC	ENST00000392404.3|ZNF664|ENSG00000179195.11|zinc finger protein 664 	ENST00000538932.2|ZNF664|ENSG00000179195.11|zinc finger protein 664 	ENST00000540762.2|FAM101A|ENSG00000178882.9|family with sequence similarity 101, member A 	ENST00000337815.4|ZNF664|ENSG00000179195.11|zinc finger protein 664
hg19_v2_chr9_+_131843377_131843413	0.224577	UUGGUCC	ENST00000372546.4|DOLPP1|ENSG00000167130.13|dolichyldiphosphatase 1 	ENST00000406974.3|DOLPP1|ENSG00000167130.13|dolichyldiphosphatase 1 	ENST00000540102.1|DOLPP1|ENSG00000167130.13|dolichyldiphosphatase 1
hg19_v2_chr1_+_26438289_26438352	0.221603	UUGGUCC	ENST00000374271.4|PDIK1L|ENSG00000175087.5|PDLIM1 interacting kinase 1 like 	ENST00000374269.1|PDIK1L|ENSG00000175087.5|PDLIM1 interacting kinase 1 like
hg19_v2_chr7_-_138666053_138666146	0.221507	UUGGUCC	ENST00000440172.1|KIAA1549|ENSG00000122778.5|KIAA1549 	ENST00000422774.1|KIAA1549|ENSG00000122778.5|KIAA1549
hg19_v2_chr12_+_27932803_27932953	0.220894	UUGGUCC	ENST00000381271.2|KLHL42|ENSG00000087448.5|kelch-like family member 42
hg19_v2_chr2_+_62423242_62423288	0.219723	UUGGUCC	ENST00000301998.4|B3GNT2|ENSG00000170340.10|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
hg19_v2_chr1_+_107599267_107599340	0.21923	UUGGUCC	ENST00000361318.5|PRMT6|ENSG00000198890.6|protein arginine methyltransferase 6 	ENST00000370078.1|PRMT6|ENSG00000198890.6|protein arginine methyltransferase 6
hg19_v2_chr14_+_90863327_90863356	0.218935	UUGGUCC	ENST00000356978.4|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta)
hg19_v2_chr9_-_5304432_5304719	0.218267	UUGGUCC	ENST00000416837.1|RLN2|ENSG00000107014.7|relaxin 2 	ENST00000308420.3|RLN2|ENSG00000107014.7|relaxin 2
hg19_v2_chr7_-_100287071_100287071	0.217626	UUGGUCC	ENST00000275732.5|GIGYF1|ENSG00000146830.9|GRB10 interacting GYF protein 1
hg19_v2_chr1_-_205782304_205782332	0.212841	UUGGUCC	ENST00000367137.3|SLC41A1|ENSG00000133065.6|solute carrier family 41 (magnesium transporter), member 1
hg19_v2_chr17_+_7788104_7788138	0.212131	UUGGUCC	ENST00000380358.4|CHD3|ENSG00000170004.12|chromodomain helicase DNA binding protein 3
hg19_v2_chr12_-_45269430_45269440	0.211218	UUGGUCC	ENST00000395487.2|NELL2|ENSG00000184613.6|NEL-like 2 (chicken)
hg19_v2_chr2_-_40679186_40679297	0.210891	UUGGUCC	ENST00000406785.2|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr20_-_47444420_47444526	0.208881	UUGGUCC	ENST00000371941.3|PREX1|ENSG00000124126.9|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 	ENST00000396220.1|PREX1|ENSG00000124126.9|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1
hg19_v2_chr6_+_83903061_83903113	0.207112	UUGGUCC	ENST00000369724.4|RWDD2A|ENSG00000013392.6|RWD domain containing 2A 	ENST00000539997.1|RWDD2A|ENSG00000013392.6|RWD domain containing 2A
hg19_v2_chrX_+_40440146_40440268	0.20326	UUGGUCC	ENST00000535539.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000378438.4|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000436783.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000544975.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000535777.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000447485.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000423649.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2
hg19_v2_chr11_+_63706444_63706486	0.199144	UUGGUCC	ENST00000377793.4|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000456907.2|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000539656.1|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit
hg19_v2_chr2_+_112812778_112812800	0.193358	UUGGUCC	ENST00000283206.4|TMEM87B|ENSG00000153214.5|transmembrane protein 87B
hg19_v2_chr20_+_23342783_23342957	0.192442	UUGGUCC	ENST00000544236.1|GZF1|ENSG00000125812.11|GDNF-inducible zinc finger protein 1 	ENST00000338121.5|GZF1|ENSG00000125812.11|GDNF-inducible zinc finger protein 1 	ENST00000542987.1|GZF1|ENSG00000125812.11|GDNF-inducible zinc finger protein 1 	ENST00000424216.1|GZF1|ENSG00000125812.11|GDNF-inducible zinc finger protein 1
hg19_v2_chr2_+_139259324_139259389	0.191843	UUGGUCC	ENST00000280098.4|SPOPL|ENSG00000144228.4|speckle-type POZ protein-like
hg19_v2_chr6_-_74230741_74230799	0.188167	UUGGUCC	ENST00000316292.9|EEF1A1|ENSG00000156508.13|eukaryotic translation elongation factor 1 alpha 1
hg19_v2_chr1_+_28995231_28995250	0.187552	UUGGUCC	ENST00000373816.1|GMEB1|ENSG00000162419.8|glucocorticoid modulatory element binding protein 1
hg19_v2_chr20_-_52210368_52210384	0.181863	UUGGUCC	ENST00000371471.2|ZNF217|ENSG00000171940.9|zinc finger protein 217
hg19_v2_chr20_+_11871371_11871428	0.181605	UUGGUCC	ENST00000254977.3|BTBD3|ENSG00000132640.10|BTB (POZ) domain containing 3
hg19_v2_chr19_+_49468558_49468567	0.181585	UUGGUCC	ENST00000331825.6|FTL|ENSG00000087086.9|ferritin, light polypeptide
hg19_v2_chr11_-_94964354_94964374	0.181216	UUGGUCC	ENST00000536441.1|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chr3_-_107809816_107809885	0.174546	UUGGUCC	ENST00000361309.5|CD47|ENSG00000196776.10|CD47 molecule 	ENST00000355354.7|CD47|ENSG00000196776.10|CD47 molecule
hg19_v2_chr12_-_77459306_77459365	0.173621	UUGGUCC	ENST00000547316.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000416496.2|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000550669.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000322886.7|E2F7|ENSG00000165891.11|E2F transcription factor 7
hg19_v2_chr17_-_35969409_35969544	0.171934	UUGGUCC	ENST00000394378.2|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000585472.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000591288.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000502449.2|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000345615.4|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000346661.4|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000585689.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000339208.6|SYNRG|ENSG00000006114.11|synergin, gamma
hg19_v2_chr13_-_21476900_21476949	0.171222	UUGGUCC	ENST00000400602.2|XPO4|ENSG00000132953.12|exportin 4 	ENST00000255305.6|XPO4|ENSG00000132953.12|exportin 4
hg19_v2_chr1_+_18958008_18958023	0.170963	UUGGUCC	ENST00000420770.2|PAX7|ENSG00000009709.7|paired box 7 	ENST00000400661.3|PAX7|ENSG00000009709.7|paired box 7
hg19_v2_chr12_+_53574464_53574539	0.169058	UUGGUCC	ENST00000416904.3|ZNF740|ENSG00000139651.9|zinc finger protein 740
hg19_v2_chr3_+_140660634_140660729	0.167831	UUGGUCC	ENST00000446041.2|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000507429.1|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36 	ENST00000324194.6|SLC25A36|ENSG00000114120.7|solute carrier family 25 (pyrimidine nucleotide carrier ), member 36
hg19_v2_chr2_-_161350305_161350391	0.163921	UUGGUCC	ENST00000348849.3|RBMS1|ENSG00000153250.13|RNA binding motif, single stranded interacting protein 1
hg19_v2_chr3_+_43328004_43328095	0.160835	UUGGUCC	ENST00000454177.1|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000429705.2|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000296088.7|SNRK|ENSG00000163788.9|SNF related kinase 	ENST00000437827.1|SNRK|ENSG00000163788.9|SNF related kinase
hg19_v2_chr14_-_23388338_23388393	0.157115	UUGGUCC	ENST00000555209.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000554256.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557403.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557549.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000555676.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557571.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557464.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000554618.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000556862.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000555722.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000346528.5|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000542016.2|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000399922.2|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557227.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000359890.3|RBM23|ENSG00000100461.13|RNA binding motif protein 23
hg19_v2_chr1_+_101361626_101361698	0.154925	UUGGUCC	ENST00000370112.4|SLC30A7|ENSG00000162695.7|solute carrier family 30 (zinc transporter), member 7
hg19_v2_chr18_+_905104_905118	0.154668	UUGGUCC	ENST00000579794.1|ADCYAP1|ENSG00000141433.8|adenylate cyclase activating polypeptide 1 (pituitary)
hg19_v2_chr22_+_40573921_40573946	0.152854	UUGGUCC	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr14_+_103243813_103243955	0.152712	UUGGUCC	ENST00000560371.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000347662.4|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000392745.2|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000539721.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000560463.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3
hg19_v2_chr6_+_41514078_41514164	0.151121	UUGGUCC	ENST00000373063.3|FOXP4|ENSG00000137166.10|forkhead box P4 	ENST00000373060.1|FOXP4|ENSG00000137166.10|forkhead box P4
hg19_v2_chr5_-_79287060_79287093	0.149163	UUGGUCC	ENST00000512560.1|MTX3|ENSG00000177034.10|metaxin 3 	ENST00000509852.1|MTX3|ENSG00000177034.10|metaxin 3 	ENST00000512528.1|MTX3|ENSG00000177034.10|metaxin 3
hg19_v2_chr17_-_7382834_7382855	0.141782	UUGGUCC	ENST00000380599.4|ZBTB4|ENSG00000174282.7|zinc finger and BTB domain containing 4
hg19_v2_chr17_+_40834580_40834633	0.141287	UUGGUCC	ENST00000264638.4|CNTNAP1|ENSG00000108797.7|contactin associated protein 1
hg19_v2_chr12_-_26278030_26278060	0.141167	UUGGUCC	ENST00000242728.4|BHLHE41|ENSG00000123095.5|basic helix-loop-helix family, member e41
hg19_v2_chr7_-_44924939_44924993	0.140669	UUGGUCC	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr3_+_11034403_11034492	0.140108	UUGGUCC	ENST00000287766.4|SLC6A1|ENSG00000157103.6|solute carrier family 6 (neurotransmitter transporter), member 1 	ENST00000425938.1|SLC6A1|ENSG00000157103.6|solute carrier family 6 (neurotransmitter transporter), member 1
hg19_v2_chr1_+_33722080_33722174	0.139392	UUGGUCC	ENST00000483388.1|ZNF362|ENSG00000160094.10|zinc finger protein 362 	ENST00000539719.1|ZNF362|ENSG00000160094.10|zinc finger protein 362
hg19_v2_chrX_-_135056216_135056227	0.136994	UUGGUCC	ENST00000305963.2|MMGT1|ENSG00000169446.4|membrane magnesium transporter 1
hg19_v2_chr8_-_53626974_53627032	0.136859	UUGGUCC	ENST00000435644.2|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1 	ENST00000518710.1|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1 	ENST00000025008.5|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1 	ENST00000517963.1|RB1CC1|ENSG00000023287.8|RB1-inducible coiled-coil 1
hg19_v2_chr19_+_19322758_19322782	0.136135	UUGGUCC	ENST00000252575.6|NCAN|ENSG00000130287.9|neurocan
hg19_v2_chr1_+_109102652_109102728	0.130171	UUGGUCC	ENST00000370035.3|FAM102B|ENSG00000162636.11|family with sequence similarity 102, member B 	ENST00000405454.1|FAM102B|ENSG00000162636.11|family with sequence similarity 102, member B
hg19_v2_chr3_+_16926441_16926463	0.128902	UUGGUCC	ENST00000418129.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2 	ENST00000396755.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2
hg19_v2_chr1_+_151043070_151043110	0.127524	UUGGUCC	ENST00000368918.3|GABPB2|ENSG00000143458.7|GA binding protein transcription factor, beta subunit 2 	ENST00000368917.1|GABPB2|ENSG00000143458.7|GA binding protein transcription factor, beta subunit 2
hg19_v2_chr1_+_25757376_25757411	0.126778	UUGGUCC	ENST00000399766.3|TMEM57|ENSG00000204178.5|transmembrane protein 57 	ENST00000399763.3|TMEM57|ENSG00000204178.5|transmembrane protein 57 	ENST00000374343.4|TMEM57|ENSG00000204178.5|transmembrane protein 57
hg19_v2_chr12_+_122516626_122516645	0.121486	UUGGUCC	ENST00000319080.7|MLXIP|ENSG00000175727.9|MLX interacting protein
hg19_v2_chr10_-_126849068_126849138	0.121254	UUGGUCC	ENST00000494626.2|CTBP2|ENSG00000175029.12|C-terminal binding protein 2 	ENST00000337195.5|CTBP2|ENSG00000175029.12|C-terminal binding protein 2
hg19_v2_chr10_+_104678032_104678094	0.121233	UUGGUCC	ENST00000369878.4|CNNM2|ENSG00000148842.13|cyclin M2 	ENST00000369875.3|CNNM2|ENSG00000148842.13|cyclin M2
hg19_v2_chr18_-_5296001_5296045	0.119161	UUGGUCC	ENST00000357006.4|ZBTB14|ENSG00000198081.6|zinc finger and BTB domain containing 14
hg19_v2_chr5_+_133451254_133451316	0.118133	UUGGUCC	ENST00000517851.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000521639.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000522375.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000378560.4|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000432532.2|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000520958.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000518915.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box) 	ENST00000395023.1|TCF7|ENSG00000081059.15|transcription factor 7 (T-cell specific, HMG-box)
hg19_v2_chr9_+_133971909_133971943	0.114202	UUGGUCC	ENST00000247291.3|AIF1L|ENSG00000126878.8|allograft inflammatory factor 1-like 	ENST00000372302.1|AIF1L|ENSG00000126878.8|allograft inflammatory factor 1-like 	ENST00000372300.1|AIF1L|ENSG00000126878.8|allograft inflammatory factor 1-like 	ENST00000372298.1|AIF1L|ENSG00000126878.8|allograft inflammatory factor 1-like
hg19_v2_chr16_+_70332956_70333130	0.114122	UUGGUCC	ENST00000288071.6|DDX19B|ENSG00000157349.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 	ENST00000393657.2|DDX19B|ENSG00000157349.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 	ENST00000355992.3|DDX19B|ENSG00000157349.11|DEAD (Asp-Glu-Ala-Asp) box polypeptide 19B 	ENST00000567706.1|RP11-529K1.3|ENSG00000260537.1|Uncharacterized protein
hg19_v2_chr9_+_17579084_17579128	0.112278	UUGGUCC	ENST00000380607.4|SH3GL2|ENSG00000107295.8|SH3-domain GRB2-like 2
hg19_v2_chr13_+_58206655_58206655	0.110589	UUGGUCC	ENST00000377918.3|PCDH17|ENSG00000118946.7|protocadherin 17
hg19_v2_chr2_-_112642267_112642267	0.108137	UUGGUCC	ENST00000341068.3|ANAPC1|ENSG00000153107.7|anaphase promoting complex subunit 1
hg19_v2_chrX_-_77041685_77041716	0.106387	UUGGUCC	ENST00000373344.5|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked 	ENST00000395603.3|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked
hg19_v2_chr1_-_155532484_155532605	0.106251	UUGGUCC	ENST00000368346.3|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila) 	ENST00000548830.1|ASH1L|ENSG00000116539.6|ash1 (absent, small, or homeotic)-like (Drosophila)
hg19_v2_chr4_+_113152881_113152912	0.10597	UUGGUCC	ENST00000274000.5|AP1AR|ENSG00000138660.7|adaptor-related protein complex 1 associated regulatory protein
hg19_v2_chr12_+_69864129_69864222	0.104158	UUGGUCC	ENST00000547219.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000299293.2|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549921.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550316.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000548154.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000547414.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550389.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550937.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549092.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550169.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2
hg19_v2_chr2_-_174830430_174830563	0.10038	UUGGUCC	ENST00000310015.6|SP3|ENSG00000172845.9|Sp3 transcription factor 	ENST00000455789.2|SP3|ENSG00000172845.9|Sp3 transcription factor
hg19_v2_chr11_-_6502534_6502579	0.0999732	UUGGUCC	ENST00000254584.2|ARFIP2|ENSG00000132254.8|ADP-ribosylation factor interacting protein 2 	ENST00000525235.1|ARFIP2|ENSG00000132254.8|ADP-ribosylation factor interacting protein 2 	ENST00000445086.2|ARFIP2|ENSG00000132254.8|ADP-ribosylation factor interacting protein 2
hg19_v2_chr20_+_56964169_56964182	0.0982742	UUGGUCC	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr3_-_148804275_148804346	0.095639	UUGGUCC	ENST00000392912.2|HLTF|ENSG00000071794.11|helicase-like transcription factor 	ENST00000465259.1|HLTF|ENSG00000071794.11|helicase-like transcription factor 	ENST00000310053.5|HLTF|ENSG00000071794.11|helicase-like transcription factor 	ENST00000494055.1|HLTF|ENSG00000071794.11|helicase-like transcription factor
hg19_v2_chr8_-_38326139_38326161	0.0956091	UUGGUCC	ENST00000335922.5|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000532791.1|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1 	ENST00000397091.5|FGFR1|ENSG00000077782.15|fibroblast growth factor receptor 1
hg19_v2_chr1_+_36690011_36690092	0.0953472	UUGGUCC	ENST00000354618.5|THRAP3|ENSG00000054118.9|thyroid hormone receptor associated protein 3 	ENST00000469141.2|THRAP3|ENSG00000054118.9|thyroid hormone receptor associated protein 3 	ENST00000478853.1|THRAP3|ENSG00000054118.9|thyroid hormone receptor associated protein 3
hg19_v2_chr5_-_133561752_133561833	0.0948481	UUGGUCC	ENST00000519718.1|CTD-2410N18.5|ENSG00000272772.1|S-phase kinase-associated protein 1  	ENST00000481195.1|PPP2CA|ENSG00000113575.5|protein phosphatase 2, catalytic subunit, alpha isozyme
hg19_v2_chr3_-_88108192_88108203	0.0932961	UUGGUCC	ENST00000309534.6|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr9_-_21335356_21335411	0.0916157	UUGGUCC	ENST00000359039.4|KLHL9|ENSG00000198642.5|kelch-like family member 9
hg19_v2_chr10_-_100027943_100028007	0.0914702	UUGGUCC	ENST00000260702.3|LOXL4|ENSG00000138131.3|lysyl oxidase-like 4
hg19_v2_chr9_-_14314066_14314075	0.0881622	UUGGUCC	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr1_+_214161272_214161322	0.0877277	UUGGUCC	ENST00000498508.2|PROX1|ENSG00000117707.11|prospero homeobox 1 	ENST00000366958.4|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr3_-_45267760_45267826	0.0849356	UUGGUCC	ENST00000503771.1|TMEM158|ENSG00000249992.1|transmembrane protein 158 (gene/pseudogene)
hg19_v2_chr19_+_49622646_49622699	0.0843911	UUGGUCC	ENST00000334186.4|PPFIA3|ENSG00000177380.9|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3
hg19_v2_chr3_-_46608010_46608048	0.0843295	UUGGUCC	ENST00000395905.3|LRRC2|ENSG00000163827.8|leucine rich repeat containing 2
hg19_v2_chr1_+_33207381_33207486	0.0838204	UUGGUCC	ENST00000401073.2|KIAA1522|ENSG00000162522.6|KIAA1522
hg19_v2_chr11_+_66610883_66610931	0.0815448	UUGGUCC	ENST00000309657.3|RCE1|ENSG00000173653.3|Ras converting CAAX endopeptidase 1 	ENST00000524506.1|RCE1|ENSG00000173653.3|Ras converting CAAX endopeptidase 1
hg19_v2_chr6_-_114664180_114664209	0.0812576	UUGGUCC	ENST00000312719.5|HS3ST5|ENSG00000249853.3|heparan sulfate (glucosamine) 3-O-sulfotransferase 5
hg19_v2_chr12_-_50222187_50222208	0.0804306	UUGGUCC	ENST00000335999.6|NCKAP5L|ENSG00000167566.12|NCK-associated protein 5-like
hg19_v2_chr5_-_73937244_73937274	0.0753872	UUGGUCC	ENST00000302351.4|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000510316.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain) 	ENST00000508331.1|ENC1|ENSG00000171617.9|ectodermal-neural cortex 1 (with BTB domain)
hg19_v2_chr10_-_115613828_115613859	0.0746936	UUGGUCC	ENST00000361384.2|DCLRE1A|ENSG00000198924.3|DNA cross-link repair 1A
hg19_v2_chr12_+_72666407_72666463	0.0737473	UUGGUCC	ENST00000261180.4|TRHDE|ENSG00000072657.4|thyrotropin-releasing hormone degrading enzyme
hg19_v2_chr4_+_37245799_37245842	0.0732128	UUGGUCC	ENST00000309447.5|KIAA1239|ENSG00000174145.7|KIAA1239
hg19_v2_chr5_-_176981417_176981508	0.0725205	UUGGUCC	ENST00000514747.1|FAM193B|ENSG00000146067.11|family with sequence similarity 193, member B 	ENST00000443375.2|FAM193B|ENSG00000146067.11|family with sequence similarity 193, member B 	ENST00000329540.5|FAM193B|ENSG00000146067.11|family with sequence similarity 193, member B
hg19_v2_chr20_-_41818373_41818527	0.0721414	UUGGUCC	ENST00000373187.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000356100.2|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000373184.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000373190.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T
hg19_v2_chr2_+_200775971_200775988	0.0720463	UUGGUCC	ENST00000319974.5|C2orf69|ENSG00000178074.5|chromosome 2 open reading frame 69
hg19_v2_chr16_-_30457048_30457224	0.0717676	UUGGUCC	ENST00000500504.2|SEPHS2|ENSG00000179918.15|selenophosphate synthetase 2 	ENST00000542752.1|SEPHS2|ENSG00000179918.15|selenophosphate synthetase 2
hg19_v2_chr17_-_43045439_43045439	0.0710635	UUGGUCC	ENST00000253407.3|C1QL1|ENSG00000131094.3|complement component 1, q subcomponent-like 1
hg19_v2_chr11_-_18656028_18656040	0.0687522	UUGGUCC	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chrX_-_153363188_153363212	0.0660008	UUGGUCC	ENST00000303391.6|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chr12_+_110719032_110719113	0.0655417	UUGGUCC	ENST00000395494.2|ATP2A2|ENSG00000174437.12|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
hg19_v2_chr1_+_97187318_97187380	0.065087	UUGGUCC	ENST00000609116.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370198.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370197.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000426398.2|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000394184.3|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr5_-_56247935_56247959	0.0618938	UUGGUCC	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chrX_+_14547632_14547682	0.0614707	UUGGUCC	ENST00000218075.4|GLRA2|ENSG00000101958.9|glycine receptor, alpha 2
hg19_v2_chr16_+_19125252_19125267	0.0599918	UUGGUCC	ENST00000566735.1|ITPRIPL2|ENSG00000205730.5|inositol 1,4,5-trisphosphate receptor interacting protein-like 2 	ENST00000381440.3|ITPRIPL2|ENSG00000205730.5|inositol 1,4,5-trisphosphate receptor interacting protein-like 2
hg19_v2_chr5_-_37839782_37839788	0.0599901	UUGGUCC	ENST00000326524.2|GDNF|ENSG00000168621.10|glial cell derived neurotrophic factor 	ENST00000515058.1|GDNF|ENSG00000168621.10|glial cell derived neurotrophic factor
hg19_v2_chrX_+_21392873_21392980	0.0597968	UUGGUCC	ENST00000379510.3|CNKSR2|ENSG00000149970.10|connector enhancer of kinase suppressor of Ras 2
hg19_v2_chr19_+_34919257_34919332	0.0588042	UUGGUCC	ENST00000246548.4|UBA2|ENSG00000126261.8|ubiquitin-like modifier activating enzyme 2 	ENST00000590048.2|UBA2|ENSG00000126261.8|ubiquitin-like modifier activating enzyme 2
hg19_v2_chr15_-_23034322_23034432	0.0586165	UUGGUCC	ENST00000539711.2|NIPA2|ENSG00000140157.10|non imprinted in Prader-Willi/Angelman syndrome 2 	ENST00000560039.1|NIPA2|ENSG00000140157.10|non imprinted in Prader-Willi/Angelman syndrome 2 	ENST00000398013.3|NIPA2|ENSG00000140157.10|non imprinted in Prader-Willi/Angelman syndrome 2 	ENST00000337451.3|NIPA2|ENSG00000140157.10|non imprinted in Prader-Willi/Angelman syndrome 2 	ENST00000359727.4|NIPA2|ENSG00000140157.10|non imprinted in Prader-Willi/Angelman syndrome 2 	ENST00000398014.2|NIPA2|ENSG00000140157.10|non imprinted in Prader-Willi/Angelman syndrome 2
hg19_v2_chr20_+_43104508_43104540	0.0581791	UUGGUCC	ENST00000262605.4|TTPAL|ENSG00000124120.6|tocopherol (alpha) transfer protein-like 	ENST00000372904.3|TTPAL|ENSG00000124120.6|tocopherol (alpha) transfer protein-like
hg19_v2_chr21_-_28338732_28338832	0.0572314	UUGGUCC	ENST00000284987.5|ADAMTS5|ENSG00000154736.5|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg19_v2_chr5_-_89705537_89705610	0.0559581	UUGGUCC	ENST00000522864.1|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3 	ENST00000522083.1|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3 	ENST00000522565.1|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3 	ENST00000522842.1|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3 	ENST00000283122.3|CETN3|ENSG00000153140.4|centrin, EF-hand protein, 3
hg19_v2_chr20_-_30310336_30310400	0.0553613	UUGGUCC	ENST00000434194.1|BCL2L1|ENSG00000171552.8|BCL2-like 1 	ENST00000376062.2|BCL2L1|ENSG00000171552.8|BCL2-like 1
hg19_v2_chr11_+_35684288_35684353	0.055003	UUGGUCC	ENST00000299413.5|TRIM44|ENSG00000166326.5|tripartite motif containing 44
hg19_v2_chr13_+_28813645_28813770	0.0549317	UUGGUCC	ENST00000282391.5|PAN3|ENSG00000152520.9|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr8_-_101571964_101572017	0.0539484	UUGGUCC	ENST00000520552.1|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000521345.1|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000523000.1|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000335659.3|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000358990.3|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000519597.1|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46
hg19_v2_chr17_-_56595196_56595266	0.0522539	UUGGUCC	ENST00000579921.1|MTMR4|ENSG00000108389.5|myotubularin related protein 4 	ENST00000579925.1|MTMR4|ENSG00000108389.5|myotubularin related protein 4 	ENST00000323456.5|MTMR4|ENSG00000108389.5|myotubularin related protein 4
hg19_v2_chrX_+_153665248_153665281	0.0520969	UUGGUCC	ENST00000447750.2|GDI1|ENSG00000203879.7|GDP dissociation inhibitor 1
hg19_v2_chr15_-_102029873_102029917	0.0516987	UUGGUCC	ENST00000348070.1|PCSK6|ENSG00000140479.12|proprotein convertase subtilisin/kexin type 6 	ENST00000358417.3|PCSK6|ENSG00000140479.12|proprotein convertase subtilisin/kexin type 6 	ENST00000344273.2|PCSK6|ENSG00000140479.12|proprotein convertase subtilisin/kexin type 6
hg19_v2_chr5_+_141303373_141303421	0.0514057	UUGGUCC	ENST00000432126.2|KIAA0141|ENSG00000081791.4|KIAA0141 	ENST00000194118.4|KIAA0141|ENSG00000081791.4|KIAA0141
hg19_v2_chr4_-_39367949_39368020	0.050591	UUGGUCC	ENST00000503784.1|RFC1|ENSG00000035928.10|replication factor C (activator 1) 1, 145kDa 	ENST00000349703.2|RFC1|ENSG00000035928.10|replication factor C (activator 1) 1, 145kDa 	ENST00000381897.1|RFC1|ENSG00000035928.10|replication factor C (activator 1) 1, 145kDa
hg19_v2_chr5_+_118407053_118407239	0.0501125	UUGGUCC	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chr1_-_154531095_154531119	0.0499427	UUGGUCC	ENST00000292211.4|UBE2Q1|ENSG00000160714.5|ubiquitin-conjugating enzyme E2Q family member 1
hg19_v2_chr9_+_34958254_34958321	0.0497833	UUGGUCC	ENST00000242315.3|KIAA1045|ENSG00000122733.11|KIAA1045
hg19_v2_chr3_-_39195037_39195069	0.0483951	UUGGUCC	ENST00000273153.5|CSRNP1|ENSG00000144655.10|cysteine-serine-rich nuclear protein 1
hg19_v2_chr17_+_16593539_16593639	0.0474034	UUGGUCC	ENST00000340621.5|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000399273.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000443444.2|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000360524.8|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000456009.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A
hg19_v2_chr5_+_122424816_122424944	0.0473557	UUGGUCC	ENST00000407847.4|PRDM6|ENSG00000061455.10|PR domain containing 6
hg19_v2_chr1_+_201924619_201924652	0.0451128	UUGGUCC	ENST00000367287.4|TIMM17A|ENSG00000134375.6|translocase of inner mitochondrial membrane 17 homolog A (yeast)
hg19_v2_chr1_+_52870227_52870243	0.0448732	UUGGUCC	ENST00000257181.9|PRPF38A|ENSG00000134748.12|pre-mRNA processing factor 38A
hg19_v2_chr1_+_155036204_155036238	0.0436647	UUGGUCC	ENST00000368409.3|EFNA4|ENSG00000243364.3|ephrin-A4 	ENST00000359751.4|EFNA4|ENSG00000243364.3|ephrin-A4 	ENST00000556931.1|EFNA3|ENSG00000143590.9|ephrin-A3 	ENST00000505139.1|EFNA3|ENSG00000251246.1|Ephrin-A3; Uncharacterized protein; cDNA FLJ57652, highly similar to Ephrin-A3  	ENST00000427683.2|EFNA4|ENSG00000243364.3|ephrin-A4
hg19_v2_chr11_-_62599505_62599560	0.0426865	UUGGUCC	ENST00000377897.4|STX5|ENSG00000162236.7|syntaxin 5 	ENST00000394690.1|STX5|ENSG00000162236.7|syntaxin 5 	ENST00000541317.1|STX5|ENSG00000162236.7|syntaxin 5 	ENST00000294179.3|STX5|ENSG00000162236.7|syntaxin 5
hg19_v2_chr1_+_117910047_117910131	0.0422318	UUGGUCC	ENST00000356554.3|MAN1A2|ENSG00000198162.8|mannosidase, alpha, class 1A, member 2
hg19_v2_chr3_+_45730733_45730773	0.0421496	UUGGUCC	ENST00000418611.1|SACM1L|ENSG00000211456.6|SAC1 suppressor of actin mutations 1-like (yeast) 	ENST00000389061.5|SACM1L|ENSG00000211456.6|SAC1 suppressor of actin mutations 1-like (yeast)
hg19_v2_chr6_+_134274322_134274342	0.041433	UUGGUCC	ENST00000367871.1|TBPL1|ENSG00000028839.5|TBP-like 1 	ENST00000237264.4|TBPL1|ENSG00000028839.5|TBP-like 1
hg19_v2_chr16_-_66584059_66584315	0.0410898	UUGGUCC	ENST00000417693.3|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000544898.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000569718.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000527284.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000299697.7|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000451102.2|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial
hg19_v2_chr8_+_29952914_29953016	0.0401042	UUGGUCC	ENST00000321250.8|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1 	ENST00000518001.1|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1 	ENST00000520682.1|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1 	ENST00000442880.2|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1 	ENST00000523116.1|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1
hg19_v2_chr4_+_141294628_141294821	0.039101	UUGGUCC	ENST00000512749.1|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000608372.1|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000506597.1|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000394201.4|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000510586.1|SCOC|ENSG00000153130.13|short coiled-coil protein
hg19_v2_chr12_-_49110613_49110681	0.0389075	UUGGUCC	ENST00000261900.3|CCNT1|ENSG00000129315.5|cyclin T1
hg19_v2_chr4_+_6642404_6642426	0.0378502	UUGGUCC	ENST00000507420.1|MRFAP1|ENSG00000179010.10|Morf4 family associated protein 1 	ENST00000382581.4|MRFAP1|ENSG00000179010.10|Morf4 family associated protein 1
hg19_v2_chr1_+_193028552_193028589	0.037231	UUGGUCC	ENST00000400968.2|TROVE2|ENSG00000116747.8|TROVE domain family, member 2 	ENST00000432079.1|TROVE2|ENSG00000116747.8|TROVE domain family, member 2
hg19_v2_chr2_+_32502952_32503025	0.0368677	UUGGUCC	ENST00000238831.4|YIPF4|ENSG00000119820.6|Yip1 domain family, member 4
hg19_v2_chr13_+_96329381_96329416	0.0342886	UUGGUCC	ENST00000602402.1|DNAJC3|ENSG00000102580.10|DnaJ (Hsp40) homolog, subfamily C, member 3 	ENST00000376795.6|DNAJC3|ENSG00000102580.10|DnaJ (Hsp40) homolog, subfamily C, member 3
hg19_v2_chr16_-_67185117_67185117	0.0335548	UUGGUCC	ENST00000449549.3|B3GNT9|ENSG00000237172.3|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9
hg19_v2_chr16_-_10674528_10674555	0.0313112	UUGGUCC	ENST00000359543.3|EMP2|ENSG00000213853.5|epithelial membrane protein 2
hg19_v2_chr6_-_128841503_128841870	0.0304521	UUGGUCC	ENST00000368215.3|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000532331.1|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368213.5|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368207.3|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000525459.1|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368210.3|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368226.4|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K 	ENST00000368227.3|PTPRK|ENSG00000152894.10|protein tyrosine phosphatase, receptor type, K
hg19_v2_chr1_+_47799446_47799493	0.0284018	UUGGUCC	ENST00000371873.5|CMPK1|ENSG00000162368.9|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg19_v2_chr11_-_82782861_82782949	0.0283513	UUGGUCC	ENST00000524635.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000526205.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000527633.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533486.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533276.2|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr16_-_58663720_58663790	0.0283079	UUGGUCC	ENST00000564557.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569240.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000441024.2|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000569020.1|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1 	ENST00000317147.5|CNOT1|ENSG00000125107.12|CCR4-NOT transcription complex, subunit 1
hg19_v2_chr11_+_68228186_68228281	0.0277739	UUGGUCC	ENST00000393799.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393800.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000528635.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000533127.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529907.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529344.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000534534.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524845.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265637.4|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524904.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393801.3|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265636.5|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529710.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3
hg19_v2_chr10_+_116581503_116581570	0.0274121	UUGGUCC	ENST00000369248.4|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1 	ENST00000369250.3|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1 	ENST00000369246.1|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1
hg19_v2_chr19_-_47975417_47975441	0.0252818	UUGGUCC	ENST00000236877.6|SLC8A2|ENSG00000118160.9|solute carrier family 8 (sodium/calcium exchanger), member 2
hg19_v2_chr6_-_136871957_136872006	0.0243387	UUGGUCC	ENST00000354570.3|MAP7|ENSG00000135525.14|microtubule-associated protein 7
hg19_v2_chr1_+_20878932_20879084	0.0229382	UUGGUCC	ENST00000332947.4|FAM43B|ENSG00000183114.6|family with sequence similarity 43, member B
hg19_v2_chr2_-_64246206_64246350	0.0208874	UUGGUCC	ENST00000409558.4|VPS54|ENSG00000143952.15|vacuolar protein sorting 54 homolog (S. cerevisiae) 	ENST00000272322.4|VPS54|ENSG00000143952.15|vacuolar protein sorting 54 homolog (S. cerevisiae)
hg19_v2_chr16_-_1464688_1464752	0.0205099	UUGGUCC	ENST00000389221.4|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000508903.2|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000397462.1|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000301712.5|UNKL|ENSG00000059145.14|unkempt family zinc finger-like
hg19_v2_chr17_+_5031687_5031687	0.0202787	UUGGUCC	ENST00000250066.6|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene) 	ENST00000304328.5|USP6|ENSG00000129204.12|ubiquitin specific peptidase 6 (Tre-2 oncogene)
hg19_v2_chr1_+_203764742_203764834	0.0189602	UUGGUCC	ENST00000432282.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000453771.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000367214.1|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000367212.3|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A 	ENST00000332127.4|ZC3H11A|ENSG00000058673.11|zinc finger CCCH-type containing 11A
hg19_v2_chr9_+_130026756_130026871	0.016805	UUGGUCC	ENST00000314904.5|GARNL3|ENSG00000136895.14|GTPase activating Rap/RanGAP domain-like 3 	ENST00000373387.4|GARNL3|ENSG00000136895.14|GTPase activating Rap/RanGAP domain-like 3
hg19_v2_chr1_+_92764522_92764628	0.0161014	UUGGUCC	ENST00000610020.1|RPAP2|ENSG00000122484.8|RNA polymerase II associated protein 2
hg19_v2_chr19_-_8070474_8070564	0.0147714	UUGGUCC	ENST00000407627.2|ELAVL1|ENSG00000066044.9|ELAV like RNA binding protein 1 	ENST00000593807.1|ELAVL1|ENSG00000066044.9|ELAV like RNA binding protein 1
hg19_v2_chr4_+_41937131_41937211	0.0147481	UUGGUCC	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr7_+_30067973_30068063	0.0147098	UUGGUCC	ENST00000258679.7|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 	ENST00000449726.1|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 	ENST00000396257.2|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8 	ENST00000396259.1|PLEKHA8|ENSG00000106086.14|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8
hg19_v2_chr3_-_171178157_171178225	0.0143033	UUGGUCC	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr17_-_42345487_42345514	0.0128978	UUGGUCC	ENST00000262418.6|SLC4A1|ENSG00000004939.9|solute carrier family 4 (anion exchanger), member 1 (Diego blood group)
hg19_v2_chr11_-_47870019_47870033	0.0119057	UUGGUCC	ENST00000378460.2|NUP160|ENSG00000030066.9|nucleoporin 160kDa
hg19_v2_chr1_-_24306798_24306828	0.0115678	UUGGUCC	ENST00000374452.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000492112.2|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000343255.5|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10 	ENST00000344989.6|SRSF10|ENSG00000188529.10|serine/arginine-rich splicing factor 10
hg19_v2_chr4_+_1283639_1283705	0.0111218	UUGGUCC	ENST00000303400.4|MAEA|ENSG00000090316.11|macrophage erythroblast attacher 	ENST00000505177.2|MAEA|ENSG00000090316.11|macrophage erythroblast attacher 	ENST00000503653.1|MAEA|ENSG00000090316.11|macrophage erythroblast attacher 	ENST00000264750.6|MAEA|ENSG00000090316.11|macrophage erythroblast attacher 	ENST00000502558.1|MAEA|ENSG00000090316.11|macrophage erythroblast attacher 	ENST00000452175.2|MAEA|ENSG00000090316.11|macrophage erythroblast attacher 	ENST00000514708.1|MAEA|ENSG00000090316.11|macrophage erythroblast attacher
hg19_v2_chr6_+_117996621_117996665	0.00974824	UUGGUCC	ENST00000368494.3|NUS1|ENSG00000153989.7|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
hg19_v2_chr3_+_35681081_35681099	0.00691104	UUGGUCC	ENST00000428373.1|ARPP21|ENSG00000172995.12|cAMP-regulated phosphoprotein, 21kDa
hg19_v2_chr14_-_64010046_64010107	0.00673566	UUGGUCC	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr17_+_27717415_27717618	0.00621185	UUGGUCC	ENST00000583121.1|TAOK1|ENSG00000160551.5|TAO kinase 1 	ENST00000261716.3|TAOK1|ENSG00000160551.5|TAO kinase 1
hg19_v2_chr10_+_91061712_91061812	0.00580914	UUGGUCC	ENST00000371826.3|IFIT2|ENSG00000119922.7|interferon-induced protein with tetratricopeptide repeats 2
hg19_v2_chr12_+_10365404_10365547	0.0040106	UUGGUCC	ENST00000266458.5|GABARAPL1|ENSG00000139112.6|GABA(A) receptor-associated protein like 1 	ENST00000421801.2|GABARAPL1|ENSG00000139112.6|GABA(A) receptor-associated protein like 1 	ENST00000544284.1|GABARAPL1|ENSG00000139112.6|GABA(A) receptor-associated protein like 1 	ENST00000545047.1|GABARAPL1|ENSG00000139112.6|GABA(A) receptor-associated protein like 1 	ENST00000543602.1|GABARAPL1|ENSG00000139112.6|GABA(A) receptor-associated protein like 1 	ENST00000545887.1|GABARAPL1|ENSG00000139112.6|GABA(A) receptor-associated protein like 1
hg19_v2_chr15_+_44829255_44829331	0.00339037	UUGGUCC	ENST00000261868.5|EIF3J|ENSG00000104131.8|eukaryotic translation initiation factor 3, subunit J 	ENST00000424492.3|EIF3J|ENSG00000104131.8|eukaryotic translation initiation factor 3, subunit J
hg19_v2_chr3_-_160823040_160823151	0.00270761	UUGGUCC	ENST00000484127.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000492353.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000473142.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000468268.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000460353.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000320474.4|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000392781.2|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
hg19_v2_chr10_+_104474207_104474297	0.00200221	UUGGUCC	ENST00000602831.1|SFXN2|ENSG00000156398.8|sideroflexin 2 	ENST00000369893.5|SFXN2|ENSG00000156398.8|sideroflexin 2
hg19_v2_chrX_-_135962876_135962896	0.00163679	UUGGUCC	ENST00000431446.3|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000570135.1|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000320676.7|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked 	ENST00000562646.1|RBMX|ENSG00000147274.10|RNA binding motif protein, X-linked
hg19_v2_chr7_+_5229819_5229900	0.00101628	UUGGUCC	ENST00000288828.4|WIPI2|ENSG00000157954.10|WD repeat domain, phosphoinositide interacting 2 	ENST00000401525.3|WIPI2|ENSG00000157954.10|WD repeat domain, phosphoinositide interacting 2 	ENST00000404704.3|WIPI2|ENSG00000157954.10|WD repeat domain, phosphoinositide interacting 2
hg19_v2_chr2_+_209130965_209131031	3.13424e-05	UUGGUCC	ENST00000392202.3|PIKFYVE|ENSG00000115020.12|phosphoinositide kinase, FYVE finger containing 	ENST00000264380.4|PIKFYVE|ENSG00000115020.12|phosphoinositide kinase, FYVE finger containing 	ENST00000407449.1|PIKFYVE|ENSG00000115020.12|phosphoinositide kinase, FYVE finger containing 	ENST00000308862.6|PIKFYVE|ENSG00000115020.12|phosphoinositide kinase, FYVE finger containing
