hg19_v2_chr6_-_24911195_24911343	1.89477	UCACAGU	ENST00000259698.4|FAM65B|ENSG00000111913.11|family with sequence similarity 65, member B
hg19_v2_chr3_+_58223228_58223282	1.02245	UCACAGU	ENST00000478253.1|ABHD6|ENSG00000163686.9|abhydrolase domain containing 6 	ENST00000295962.4|ABHD6|ENSG00000163686.9|abhydrolase domain containing 6
hg19_v2_chr14_+_56585048_56585150	0.860581	UCACAGU	ENST00000267460.4|PELI2|ENSG00000139946.5|pellino E3 ubiquitin protein ligase family member 2
hg19_v2_chr14_+_67999999_68000036	0.842867	UCACAGU	ENST00000329153.5|PLEKHH1|ENSG00000054690.9|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
hg19_v2_chr5_+_76506706_76506787	0.783156	UCACAGU	ENST00000340978.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000346042.3|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000264917.5|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000342343.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B 	ENST00000333194.4|PDE8B|ENSG00000113231.9|phosphodiesterase 8B
hg19_v2_chr8_+_40010989_40011008	0.702424	UCACAGU	ENST00000315792.3|C8orf4|ENSG00000176907.3|chromosome 8 open reading frame 4
hg19_v2_chr14_+_100259666_100259685	0.695851	UCACAGU	ENST00000262233.6|EML1|ENSG00000066629.12|echinoderm microtubule associated protein like 1 	ENST00000334192.4|EML1|ENSG00000066629.12|echinoderm microtubule associated protein like 1
hg19_v2_chr14_-_92413727_92413743	0.690242	UCACAGU	ENST00000267620.10|FBLN5|ENSG00000140092.10|fibulin 5
hg19_v2_chr17_+_55333876_55333939	0.653503	UCACAGU	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr5_-_57756087_57756087	0.623309	UCACAGU	ENST00000274289.3|PLK2|ENSG00000145632.10|polo-like kinase 2
hg19_v2_chr6_+_19837592_19837621	0.604674	UCACAGU	ENST00000378700.3|ID4|ENSG00000172201.6|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein
hg19_v2_chr5_+_50678921_50678921	0.595595	UCACAGU	ENST00000230658.7|ISL1|ENSG00000016082.10|ISL LIM homeobox 1
hg19_v2_chr19_+_32896697_32896786	0.588135	UCACAGU	ENST00000586987.1|DPY19L3|ENSG00000178904.14|dpy-19-like 3 (C. elegans)
hg19_v2_chr11_-_74109422_74109518	0.580551	UCACAGU	ENST00000298198.4|PGM2L1|ENSG00000165434.6|phosphoglucomutase 2-like 1
hg19_v2_chr6_-_39197226_39197258	0.573878	UCACAGU	ENST00000359534.3|KCNK5|ENSG00000164626.8|potassium channel, subfamily K, member 5
hg19_v2_chr1_-_92351769_92351787	0.562611	UCACAGU	ENST00000212355.4|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr13_+_24734844_24734873	0.541099	UCACAGU	ENST00000382108.3|SPATA13|ENSG00000182957.11|spermatogenesis associated 13
hg19_v2_chr20_-_50419055_50419066	0.540428	UCACAGU	ENST00000217086.4|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr4_-_107957454_107957475	0.538346	UCACAGU	ENST00000285311.3|DKK2|ENSG00000155011.4|dickkopf WNT signaling pathway inhibitor 2
hg19_v2_chr9_-_3525968_3526016	0.530639	UCACAGU	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chr4_+_85504075_85504132	0.487296	UCACAGU	ENST00000295887.5|CDS1|ENSG00000163624.5|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1
hg19_v2_chr9_-_130742792_130742821	0.483933	UCACAGU	ENST00000373095.1|FAM102A|ENSG00000167106.7|family with sequence similarity 102, member A
hg19_v2_chr8_+_76452097_76452126	0.477755	UCACAGU	ENST00000396423.2|HNF4G|ENSG00000164749.7|hepatocyte nuclear factor 4, gamma
hg19_v2_chr3_+_69812877_69812962	0.477511	UCACAGU	ENST00000457080.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000328528.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr5_-_124080203_124080258	0.474361	UCACAGU	ENST00000504926.1|ZNF608|ENSG00000168916.11|zinc finger protein 608
hg19_v2_chr8_+_81397876_81397902	0.465633	UCACAGU	ENST00000430430.1|ZBTB10|ENSG00000205189.7|zinc finger and BTB domain containing 10
hg19_v2_chr7_+_30174426_30174441	0.449665	UCACAGU	ENST00000324453.8|C7orf41|ENSG00000180354.11|maturin, neural progenitor differentiation regulator homolog (Xenopus)
hg19_v2_chrX_-_129402857_129402880	0.436604	UCACAGU	ENST00000447817.1|ZNF280C|ENSG00000056277.11|zinc finger protein 280C 	ENST00000370978.4|ZNF280C|ENSG00000056277.11|zinc finger protein 280C
hg19_v2_chr1_+_61547894_61547980	0.434252	UCACAGU	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr19_-_7293942_7294045	0.426034	UCACAGU	ENST00000341500.5|INSR|ENSG00000171105.9|insulin receptor 	ENST00000302850.5|INSR|ENSG00000171105.9|insulin receptor
hg19_v2_chr1_+_244214577_244214593	0.425251	UCACAGU	ENST00000358704.4|ZBTB18|ENSG00000179456.9|zinc finger and BTB domain containing 18
hg19_v2_chr17_-_7232585_7232712	0.420273	UCACAGU	ENST00000571887.1|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000315614.7|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000399464.2|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4 	ENST00000570460.1|NEURL4|ENSG00000215041.5|neuralized E3 ubiquitin protein ligase 4
hg19_v2_chr6_+_126112001_126112062	0.417136	UCACAGU	ENST00000392477.2|NCOA7|ENSG00000111912.14|nuclear receptor coactivator 7
hg19_v2_chr8_-_72268889_72268955	0.41649	UCACAGU	ENST00000388742.4|EYA1|ENSG00000104313.13|eyes absent homolog 1 (Drosophila)
hg19_v2_chr12_-_90049828_90049847	0.412978	UCACAGU	ENST00000261173.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1 	ENST00000348959.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr11_-_123525289_123525341	0.412495	UCACAGU	ENST00000392770.2|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit 	ENST00000299333.3|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit 	ENST00000530277.1|SCN3B|ENSG00000166257.4|sodium channel, voltage-gated, type III, beta subunit
hg19_v2_chr3_-_114790179_114790222	0.4107	UCACAGU	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr5_+_167718604_167718746	0.406507	UCACAGU	ENST00000265293.4|WWC1|ENSG00000113645.9|WW and C2 domain containing 1
hg19_v2_chr1_-_57045228_57045242	0.402272	UCACAGU	ENST00000371250.3|PPAP2B|ENSG00000162407.8|phosphatidic acid phosphatase type 2B
hg19_v2_chr16_+_77822427_77822469	0.39578	UCACAGU	ENST00000302536.2|VAT1L|ENSG00000171724.2|vesicle amine transport 1-like
hg19_v2_chr5_-_38595498_38595514	0.394325	UCACAGU	ENST00000263409.4|LIFR|ENSG00000113594.5|leukemia inhibitory factor receptor alpha
hg19_v2_chr4_+_5053162_5053184	0.388879	UCACAGU	ENST00000282908.5|STK32B|ENSG00000152953.8|serine/threonine kinase 32B
hg19_v2_chr4_-_89619386_89619386	0.380801	UCACAGU	ENST00000323061.5|NAP1L5|ENSG00000177432.6|nucleosome assembly protein 1-like 5
hg19_v2_chr7_+_90225796_90225811	0.378755	UCACAGU	ENST00000380050.3|CDK14|ENSG00000058091.12|cyclin-dependent kinase 14
hg19_v2_chr1_-_173991434_173991556	0.373585	UCACAGU	ENST00000367696.2|RC3H1|ENSG00000135870.7|ring finger and CCCH-type domains 1
hg19_v2_chr5_-_160279207_160279247	0.367023	UCACAGU	ENST00000327245.5|ATP10B|ENSG00000118322.8|ATPase, class V, type 10B
hg19_v2_chr6_-_119399895_119399915	0.364246	UCACAGU	ENST00000338891.7|FAM184A|ENSG00000111879.14|family with sequence similarity 184, member A
hg19_v2_chr16_+_28303804_28303864	0.363851	UCACAGU	ENST00000341901.4|SBK1|ENSG00000188322.4|SH3 domain binding kinase 1
hg19_v2_chr5_-_121413974_121413986	0.360867	UCACAGU	ENST00000231004.4|LOX|ENSG00000113083.8|lysyl oxidase
hg19_v2_chr9_+_71320596_71320633	0.359458	UCACAGU	ENST00000265382.3|PIP5K1B|ENSG00000107242.13|phosphatidylinositol-4-phosphate 5-kinase, type I, beta
hg19_v2_chr1_+_38259540_38259569	0.358927	UCACAGU	ENST00000397631.3|MANEAL|ENSG00000185090.10|mannosidase, endo-alpha-like
hg19_v2_chr7_+_94285637_94285689	0.355703	UCACAGU	ENST00000482108.1|PEG10|ENSG00000242265.1|paternally expressed 10 	ENST00000488574.1|PEG10|ENSG00000242265.1|paternally expressed 10
hg19_v2_chr16_-_53737795_53737850	0.343441	UCACAGU	ENST00000262135.4|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000564374.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000566096.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like
hg19_v2_chr3_+_119187785_119187863	0.338164	UCACAGU	ENST00000295588.4|POGLUT1|ENSG00000163389.6|protein O-glucosyltransferase 1 	ENST00000476573.1|POGLUT1|ENSG00000163389.6|protein O-glucosyltransferase 1
hg19_v2_chr14_+_105267250_105267250	0.33409	UCACAGU	ENST00000342537.7|ZBTB42|ENSG00000179627.9|zinc finger and BTB domain containing 42
hg19_v2_chr17_+_8924837_8924872	0.331066	UCACAGU	ENST00000173229.2|NTN1|ENSG00000065320.4|netrin 1
hg19_v2_chrX_+_16964794_16964861	0.329772	UCACAGU	ENST00000357277.3|REPS2|ENSG00000169891.13|RALBP1 associated Eps domain containing 2
hg19_v2_chr4_+_81951957_81952119	0.328336	UCACAGU	ENST00000282701.2|BMP3|ENSG00000152785.6|bone morphogenetic protein 3
hg19_v2_chr9_-_127703333_127703398	0.325573	UCACAGU	ENST00000373555.4|GOLGA1|ENSG00000136935.9|golgin A1
hg19_v2_chr7_-_95225768_95225967	0.325548	UCACAGU	ENST00000005178.5|PDK4|ENSG00000004799.7|pyruvate dehydrogenase kinase, isozyme 4
hg19_v2_chr12_+_8234807_8234855	0.324664	UCACAGU	ENST00000339754.5|NECAP1|ENSG00000089818.12|NECAP endocytosis associated 1
hg19_v2_chr6_+_36164487_36164559	0.31957	UCACAGU	ENST00000357641.6|BRPF3|ENSG00000096070.15|bromodomain and PHD finger containing, 3
hg19_v2_chr7_-_79082867_79082900	0.3157	UCACAGU	ENST00000419488.1|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2 	ENST00000354212.4|MAGI2|ENSG00000187391.13|membrane associated guanylate kinase, WW and PDZ domain containing 2
hg19_v2_chr9_-_126030817_126030906	0.314836	UCACAGU	ENST00000348403.5|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein 	ENST00000447404.2|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein 	ENST00000360998.3|STRBP|ENSG00000165209.14|spermatid perinuclear RNA binding protein
hg19_v2_chr22_+_46067678_46067771	0.314498	UCACAGU	ENST00000381061.4|ATXN10|ENSG00000130638.11|ataxin 10 	ENST00000252934.5|ATXN10|ENSG00000130638.11|ataxin 10
hg19_v2_chr16_+_66400533_66400545	0.312931	UCACAGU	ENST00000341529.3|CDH5|ENSG00000179776.13|cadherin 5, type 2 (vascular endothelium)
hg19_v2_chr16_-_68482440_68482591	0.312324	UCACAGU	ENST00000219334.5|SMPD3|ENSG00000103056.7|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
hg19_v2_chr5_-_132073210_132073330	0.310429	UCACAGU	ENST00000378735.1|KIF3A|ENSG00000131437.11|kinesin family member 3A 	ENST00000378746.4|KIF3A|ENSG00000131437.11|kinesin family member 3A
hg19_v2_chr16_+_69599861_69599887	0.305342	UCACAGU	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr12_+_32112340_32112358	0.302442	UCACAGU	ENST00000540924.1|KIAA1551|ENSG00000174718.7|KIAA1551 	ENST00000312561.4|KIAA1551|ENSG00000174718.7|KIAA1551
hg19_v2_chrX_+_78426469_78426469	0.301787	UCACAGU	ENST00000276077.1|GPR174|ENSG00000147138.1|G protein-coupled receptor 174
hg19_v2_chr1_-_174992544_174992576	0.298842	UCACAGU	ENST00000476371.1|MRPS14|ENSG00000120333.4|mitochondrial ribosomal protein S14
hg19_v2_chr12_-_65146636_65146651	0.297885	UCACAGU	ENST00000418919.2|GNS|ENSG00000135677.6|glucosamine (N-acetyl)-6-sulfatase
hg19_v2_chr3_+_155588300_155588369	0.297808	UCACAGU	ENST00000496455.2|GMPS|ENSG00000163655.11|guanine monphosphate synthase
hg19_v2_chr9_-_88714421_88714506	0.296985	UCACAGU	ENST00000388712.3|GOLM1|ENSG00000135052.12|golgi membrane protein 1
hg19_v2_chrX_-_3631635_3631698	0.29509	UCACAGU	ENST00000262848.5|PRKX|ENSG00000183943.5|protein kinase, X-linked
hg19_v2_chr1_+_156163880_156163917	0.292017	UCACAGU	ENST00000359511.4|SLC25A44|ENSG00000160785.9|solute carrier family 25, member 44 	ENST00000423538.2|SLC25A44|ENSG00000160785.9|solute carrier family 25, member 44
hg19_v2_chr18_-_268019_268064	0.29165	UCACAGU	ENST00000261600.6|THOC1|ENSG00000079134.7|THO complex 1
hg19_v2_chr8_+_28351707_28351781	0.290741	UCACAGU	ENST00000537916.1|FZD3|ENSG00000104290.6|frizzled family receptor 3 	ENST00000523546.1|FZD3|ENSG00000104290.6|frizzled family receptor 3 	ENST00000240093.3|FZD3|ENSG00000104290.6|frizzled family receptor 3
hg19_v2_chr5_+_172483347_172483407	0.290719	UCACAGU	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr11_+_125034586_125034604	0.290519	UCACAGU	ENST00000298282.9|PKNOX2|ENSG00000165495.11|PBX/knotted 1 homeobox 2
hg19_v2_chr1_-_225840747_225840860	0.287811	UCACAGU	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr12_-_77459306_77459365	0.287598	UCACAGU	ENST00000547316.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000416496.2|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000550669.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000322886.7|E2F7|ENSG00000165891.11|E2F transcription factor 7
hg19_v2_chr13_-_20357057_20357105	0.286364	UCACAGU	ENST00000338910.4|PSPC1|ENSG00000121390.13|paraspeckle component 1
hg19_v2_chr7_+_116312411_116312502	0.285914	UCACAGU	ENST00000456159.1|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000397752.3|MET|ENSG00000105976.10|met proto-oncogene 	ENST00000318493.6|MET|ENSG00000105976.10|met proto-oncogene
hg19_v2_chr6_+_80341000_80341025	0.28336	UCACAGU	ENST00000369838.4|SH3BGRL2|ENSG00000198478.6|SH3 domain binding glutamic acid-rich protein like 2
hg19_v2_chr12_+_50451331_50451429	0.282432	UCACAGU	ENST00000228468.4|ASIC1|ENSG00000110881.7|acid-sensing (proton-gated) ion channel 1
hg19_v2_chr18_-_74207146_74207183	0.280526	UCACAGU	ENST00000443185.2|ZNF516|ENSG00000101493.6|zinc finger protein 516
hg19_v2_chr8_-_94753229_94753263	0.280518	UCACAGU	ENST00000518597.1|RBM12B|ENSG00000183808.7|RNA binding motif protein 12B 	ENST00000399300.2|RBM12B|ENSG00000183808.7|RNA binding motif protein 12B 	ENST00000517700.1|RBM12B|ENSG00000183808.7|RNA binding motif protein 12B
hg19_v2_chr6_-_107436473_107436543	0.278826	UCACAGU	ENST00000369042.1|BEND3|ENSG00000178409.9|BEN domain containing 3
hg19_v2_chrX_+_51486481_51486549	0.278125	UCACAGU	ENST00000340438.4|GSPT2|ENSG00000189369.7|G1 to S phase transition 2
hg19_v2_chr14_-_39901618_39901704	0.277528	UCACAGU	ENST00000554932.1|FBXO33|ENSG00000165355.7|F-box protein 33 	ENST00000298097.7|FBXO33|ENSG00000165355.7|F-box protein 33
hg19_v2_chr10_+_81107216_81107237	0.272565	UCACAGU	ENST00000394579.3|PPIF|ENSG00000108179.9|peptidylprolyl isomerase F 	ENST00000225174.3|PPIF|ENSG00000108179.9|peptidylprolyl isomerase F
hg19_v2_chr18_+_67956135_67956144	0.270926	UCACAGU	ENST00000397942.3|SOCS6|ENSG00000170677.5|suppressor of cytokine signaling 6
hg19_v2_chr1_-_160001737_160001790	0.269695	UCACAGU	ENST00000368090.2|PIGM|ENSG00000143315.5|phosphatidylinositol glycan anchor biosynthesis, class M
hg19_v2_chr3_+_14444063_14444133	0.269327	UCACAGU	ENST00000454876.2|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6 	ENST00000360861.3|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6 	ENST00000416216.2|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6
hg19_v2_chr17_+_56160768_56160786	0.269283	UCACAGU	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chr15_+_73344791_73344900	0.268865	UCACAGU	ENST00000261908.6|NEO1|ENSG00000067141.12|neogenin 1
hg19_v2_chr12_-_63328817_63328870	0.268425	UCACAGU	ENST00000228705.6|PPM1H|ENSG00000111110.7|protein phosphatase, Mg2+/Mn2+ dependent, 1H
hg19_v2_chr15_+_76352178_76352306	0.265154	UCACAGU	ENST00000388942.3|C15orf27|ENSG00000169758.8|chromosome 15 open reading frame 27
hg19_v2_chr15_-_49255632_49255650	0.263961	UCACAGU	ENST00000332408.4|SHC4|ENSG00000185634.7|SHC (Src homology 2 domain containing) family, member 4
hg19_v2_chrX_+_17393543_17393543	0.263767	UCACAGU	ENST00000380060.3|NHS|ENSG00000188158.10|Nance-Horan syndrome (congenital cataracts and dental anomalies)
hg19_v2_chr1_-_75139397_75139446	0.263306	UCACAGU	ENST00000326665.5|C1orf173|ENSG00000178965.9|chromosome 1 open reading frame 173
hg19_v2_chr1_-_35395178_35395265	0.262559	UCACAGU	ENST00000373347.1|DLGAP3|ENSG00000116544.7|discs, large (Drosophila) homolog-associated protein 3
hg19_v2_chrX_+_16804544_16804613	0.2586	UCACAGU	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chr18_+_13218769_13218792	0.257013	UCACAGU	ENST00000399848.3|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4 	ENST00000361205.4|LDLRAD4|ENSG00000168675.14|low density lipoprotein receptor class A domain containing 4
hg19_v2_chr3_+_139654018_139654039	0.256088	UCACAGU	ENST00000458420.3|CLSTN2|ENSG00000158258.11|calsyntenin 2
hg19_v2_chr17_+_38296576_38296604	0.255333	UCACAGU	ENST00000264645.7|CASC3|ENSG00000108349.10|cancer susceptibility candidate 3
hg19_v2_chr1_-_39339777_39339777	0.251768	UCACAGU	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chr14_+_103243813_103243955	0.251611	UCACAGU	ENST00000560371.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000347662.4|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000392745.2|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000539721.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3 	ENST00000560463.1|TRAF3|ENSG00000131323.10|TNF receptor-associated factor 3
hg19_v2_chr1_+_101361626_101361698	0.251486	UCACAGU	ENST00000370112.4|SLC30A7|ENSG00000162695.7|solute carrier family 30 (zinc transporter), member 7
hg19_v2_chr6_-_166075557_166075588	0.251245	UCACAGU	ENST00000539869.2|PDE10A|ENSG00000112541.9|phosphodiesterase 10A 	ENST00000366882.1|PDE10A|ENSG00000112541.9|phosphodiesterase 10A
hg19_v2_chr14_-_90085458_90085557	0.249842	UCACAGU	ENST00000345097.4|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555855.1|FOXN3|ENSG00000053254.11|forkhead box N3 	ENST00000555353.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr1_+_211433275_211433335	0.249326	UCACAGU	ENST00000367005.4|RCOR3|ENSG00000117625.9|REST corepressor 3
hg19_v2_chr20_+_10199468_10199516	0.248956	UCACAGU	ENST00000254976.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa 	ENST00000304886.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa
hg19_v2_chr12_-_12419703_12419811	0.247818	UCACAGU	ENST00000543091.1|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6 	ENST00000261349.4|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6
hg19_v2_chr4_+_26862400_26862416	0.247276	UCACAGU	ENST00000467011.1|STIM2|ENSG00000109689.10|stromal interaction molecule 2 	ENST00000412829.2|STIM2|ENSG00000109689.10|stromal interaction molecule 2
hg19_v2_chr16_-_71758602_71758604	0.24632	UCACAGU	ENST00000568954.1|PHLPP2|ENSG00000040199.14|PH domain and leucine rich repeat protein phosphatase 2
hg19_v2_chr11_-_30038490_30038590	0.243812	UCACAGU	ENST00000328224.6|KCNA4|ENSG00000182255.6|potassium voltage-gated channel, shaker-related subfamily, member 4
hg19_v2_chr4_+_160188889_160188968	0.241314	UCACAGU	ENST00000264431.4|RAPGEF2|ENSG00000109756.4|Rap guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr5_-_1524015_1524108	0.238884	UCACAGU	ENST00000283415.3|LPCAT1|ENSG00000153395.5|lysophosphatidylcholine acyltransferase 1
hg19_v2_chr14_+_36003248_36003378	0.238532	UCACAGU	ENST00000307169.3|INSM2|ENSG00000168348.3|insulinoma-associated 2
hg19_v2_chr3_+_11034403_11034492	0.238523	UCACAGU	ENST00000287766.4|SLC6A1|ENSG00000157103.6|solute carrier family 6 (neurotransmitter transporter), member 1 	ENST00000425938.1|SLC6A1|ENSG00000157103.6|solute carrier family 6 (neurotransmitter transporter), member 1
hg19_v2_chr12_-_88974236_88974256	0.236995	UCACAGU	ENST00000228280.5|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000552044.1|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000357116.4|KITLG|ENSG00000049130.9|KIT ligand
hg19_v2_chr8_-_103425047_103425069	0.230834	UCACAGU	ENST00000520539.1|UBR5|ENSG00000104517.8|ubiquitin protein ligase E3 component n-recognin 5
hg19_v2_chr19_+_51815102_51815102	0.2293	UCACAGU	ENST00000270642.8|IGLON5|ENSG00000142549.9|IgLON family member 5
hg19_v2_chr3_+_23986748_23986761	0.22799	UCACAGU	ENST00000312521.4|NR1D2|ENSG00000174738.8|nuclear receptor subfamily 1, group D, member 2
hg19_v2_chrX_-_25034065_25034088	0.226727	UCACAGU	ENST00000379044.4|ARX|ENSG00000004848.6|aristaless related homeobox
hg19_v2_chr12_+_54422142_54422239	0.225386	UCACAGU	ENST00000243108.4|HOXC6|ENSG00000197757.7|homeobox C6
hg19_v2_chr12_+_40787194_40787197	0.222455	UCACAGU	ENST00000425730.2|MUC19|ENSG00000205592.9|mucin 19, oligomeric 	ENST00000454784.4|MUC19|ENSG00000205592.9|mucin 19, oligomeric
hg19_v2_chr11_+_369804_369804	0.22172	UCACAGU	ENST00000329962.6|B4GALNT4|ENSG00000182272.7|beta-1,4-N-acetyl-galactosaminyl transferase 4
hg19_v2_chr2_+_108443388_108443393	0.220406	UCACAGU	ENST00000354986.4|RGPD4|ENSG00000196862.8|RANBP2-like and GRIP domain containing 4 	ENST00000408999.3|RGPD4|ENSG00000196862.8|RANBP2-like and GRIP domain containing 4
hg19_v2_chr15_-_75249793_75249810	0.220403	UCACAGU	ENST00000322177.5|RPP25|ENSG00000178718.5|ribonuclease P/MRP 25kDa subunit
hg19_v2_chr3_-_39195037_39195069	0.220122	UCACAGU	ENST00000273153.5|CSRNP1|ENSG00000144655.10|cysteine-serine-rich nuclear protein 1
hg19_v2_chr16_+_66878814_66878843	0.220055	UCACAGU	ENST00000394069.3|CA7|ENSG00000168748.9|carbonic anhydrase VII
hg19_v2_chr9_-_127905736_127905815	0.21868	UCACAGU	ENST00000336505.6|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion 	ENST00000373549.4|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion
hg19_v2_chr1_-_204329013_204329086	0.216083	UCACAGU	ENST00000272203.3|PLEKHA6|ENSG00000143850.8|pleckstrin homology domain containing, family A member 6 	ENST00000414478.1|PLEKHA6|ENSG00000143850.8|pleckstrin homology domain containing, family A member 6
hg19_v2_chr7_+_6144514_6144614	0.214699	UCACAGU	ENST00000306177.5|USP42|ENSG00000106346.7|ubiquitin specific peptidase 42 	ENST00000465073.2|USP42|ENSG00000106346.7|ubiquitin specific peptidase 42
hg19_v2_chr6_+_133562472_133562556	0.214447	UCACAGU	ENST00000430974.2|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000367895.5|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355167.3|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila) 	ENST00000355286.6|EYA4|ENSG00000112319.13|eyes absent homolog 4 (Drosophila)
hg19_v2_chr14_+_57735614_57735629	0.214139	UCACAGU	ENST00000261558.3|AP5M1|ENSG00000053770.7|adaptor-related protein complex 5, mu 1 subunit
hg19_v2_chr10_+_127408263_127408308	0.212173	UCACAGU	ENST00000337623.3|C10orf137|ENSG00000107938.13|erythroid differentiation regulatory factor 1
hg19_v2_chr16_-_73082274_73082274	0.211929	UCACAGU	ENST00000268489.5|ZFHX3|ENSG00000140836.10|zinc finger homeobox 3
hg19_v2_chr3_-_134093395_134093436	0.210511	UCACAGU	ENST00000249883.5|AMOTL2|ENSG00000114019.10|angiomotin like 2
hg19_v2_chr7_-_92219698_92219713	0.207529	UCACAGU	ENST00000438306.1|FAM133B|ENSG00000234545.3|family with sequence similarity 133, member B 	ENST00000445716.1|FAM133B|ENSG00000234545.3|family with sequence similarity 133, member B
hg19_v2_chr14_+_71374122_71374193	0.205611	UCACAGU	ENST00000304743.2|PCNX|ENSG00000100731.11|pecanex homolog (Drosophila) 	ENST00000238570.5|PCNX|ENSG00000100731.11|pecanex homolog (Drosophila)
hg19_v2_chr22_-_39239987_39240041	0.204555	UCACAGU	ENST00000333039.2|NPTXR|ENSG00000221890.2|neuronal pentraxin receptor
hg19_v2_chrX_+_72783026_72783049	0.204185	UCACAGU	ENST00000373504.6|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1 	ENST00000373502.5|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1
hg19_v2_chr16_+_2587998_2588011	0.202432	UCACAGU	ENST00000441549.3|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1 	ENST00000268673.7|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1
hg19_v2_chr1_+_89990431_89990493	0.201595	UCACAGU	ENST00000330947.2|LRRC8B|ENSG00000197147.8|leucine rich repeat containing 8 family, member B 	ENST00000358200.4|LRRC8B|ENSG00000197147.8|leucine rich repeat containing 8 family, member B
hg19_v2_chr7_+_94139105_94139197	0.201233	UCACAGU	ENST00000297273.4|CASD1|ENSG00000127995.12|CAS1 domain containing 1
hg19_v2_chrX_+_150151752_150151762	0.198601	UCACAGU	ENST00000325307.7|HMGB3|ENSG00000029993.10|high mobility group box 3
hg19_v2_chr12_-_15942309_15942330	0.198515	UCACAGU	ENST00000544064.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8 	ENST00000543523.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8 	ENST00000536793.1|EPS8|ENSG00000151491.8|epidermal growth factor receptor pathway substrate 8
hg19_v2_chr2_-_33824336_33824378	0.197833	UCACAGU	ENST00000431950.1|FAM98A|ENSG00000119812.14|family with sequence similarity 98, member A 	ENST00000403368.1|FAM98A|ENSG00000119812.14|family with sequence similarity 98, member A 	ENST00000441530.2|FAM98A|ENSG00000119812.14|family with sequence similarity 98, member A
hg19_v2_chr6_+_391739_391759	0.196772	UCACAGU	ENST00000380956.4|IRF4|ENSG00000137265.10|interferon regulatory factor 4
hg19_v2_chr17_-_3749515_3749551	0.195409	UCACAGU	ENST00000158149.3|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85 	ENST00000389005.4|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85
hg19_v2_chr17_-_47492236_47492251	0.193657	UCACAGU	ENST00000434917.2|PHB|ENSG00000167085.7|prohibitin 	ENST00000300408.3|PHB|ENSG00000167085.7|prohibitin 	ENST00000511832.1|PHB|ENSG00000167085.7|prohibitin 	ENST00000419140.2|PHB|ENSG00000167085.7|prohibitin
hg19_v2_chr2_-_100939195_100939195	0.192175	UCACAGU	ENST00000393437.3|LONRF2|ENSG00000170500.8|LON peptidase N-terminal domain and ring finger 2
hg19_v2_chr22_-_37099555_37099603	0.191893	UCACAGU	ENST00000300105.6|CACNG2|ENSG00000166862.6|calcium channel, voltage-dependent, gamma subunit 2
hg19_v2_chr19_+_38397839_38397932	0.191837	UCACAGU	ENST00000222345.6|SIPA1L3|ENSG00000105738.6|signal-induced proliferation-associated 1 like 3
hg19_v2_chr1_+_215256467_215256622	0.190007	UCACAGU	ENST00000391894.2|KCNK2|ENSG00000082482.9|potassium channel, subfamily K, member 2 	ENST00000444842.2|KCNK2|ENSG00000082482.9|potassium channel, subfamily K, member 2
hg19_v2_chr20_+_49348081_49348096	0.189177	UCACAGU	ENST00000371610.2|PARD6B|ENSG00000124171.4|par-6 family cell polarity regulator beta
hg19_v2_chr1_-_200992827_200992867	0.186319	UCACAGU	ENST00000332129.2|KIF21B|ENSG00000116852.10|kinesin family member 21B 	ENST00000422435.2|KIF21B|ENSG00000116852.10|kinesin family member 21B
hg19_v2_chr5_+_112312416_112312440	0.18446	UCACAGU	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr3_-_64211112_64211152	0.1839	UCACAGU	ENST00000295902.6|PRICKLE2|ENSG00000163637.7|prickle homolog 2 (Drosophila)
hg19_v2_chr7_-_103629963_103630056	0.183769	UCACAGU	ENST00000428762.1|RELN|ENSG00000189056.9|reelin 	ENST00000343529.5|RELN|ENSG00000189056.9|reelin 	ENST00000424685.2|RELN|ENSG00000189056.9|reelin
hg19_v2_chr2_+_46524537_46524553	0.182909	UCACAGU	ENST00000263734.3|EPAS1|ENSG00000116016.9|endothelial PAS domain protein 1
hg19_v2_chr6_+_136172820_136172846	0.182113	UCACAGU	ENST00000308191.6|PDE7B|ENSG00000171408.9|phosphodiesterase 7B
hg19_v2_chr15_-_61521495_61521518	0.182086	UCACAGU	ENST00000335670.6|RORA|ENSG00000069667.11|RAR-related orphan receptor A
hg19_v2_chr11_+_121322832_121322912	0.181869	UCACAGU	ENST00000260197.7|SORL1|ENSG00000137642.8|sortilin-related receptor, L(DLR class) A repeats containing
hg19_v2_chr15_-_37390482_37390572	0.181315	UCACAGU	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr2_-_71454185_71454242	0.180952	UCACAGU	ENST00000244221.8|PAIP2B|ENSG00000124374.8|poly(A) binding protein interacting protein 2B
hg19_v2_chr4_-_170192185_170192256	0.179643	UCACAGU	ENST00000284637.9|SH3RF1|ENSG00000154447.10|SH3 domain containing ring finger 1
hg19_v2_chr15_+_29131103_29131186	0.177319	UCACAGU	ENST00000558402.1|APBA2|ENSG00000034053.10|amyloid beta (A4) precursor protein-binding, family A, member 2 	ENST00000558330.1|APBA2|ENSG00000034053.10|amyloid beta (A4) precursor protein-binding, family A, member 2
hg19_v2_chr7_-_139876812_139876860	0.176541	UCACAGU	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr9_+_103790991_103791001	0.176189	UCACAGU	ENST00000374874.3|LPPR1|ENSG00000148123.10|Lipid phosphate phosphatase-related protein type 1
hg19_v2_chrX_+_64708615_64708615	0.175977	UCACAGU	ENST00000338957.4|ZC3H12B|ENSG00000102053.11|zinc finger CCCH-type containing 12B 	ENST00000423889.3|ZC3H12B|ENSG00000102053.11|zinc finger CCCH-type containing 12B
hg19_v2_chr10_-_62149433_62149488	0.175503	UCACAGU	ENST00000280772.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr11_+_35684288_35684353	0.175008	UCACAGU	ENST00000299413.5|TRIM44|ENSG00000166326.5|tripartite motif containing 44
hg19_v2_chr5_-_81046922_81047072	0.174302	UCACAGU	ENST00000514493.1|SSBP2|ENSG00000145687.11|single-stranded DNA binding protein 2 	ENST00000320672.4|SSBP2|ENSG00000145687.11|single-stranded DNA binding protein 2
hg19_v2_chr7_-_152133059_152133102	0.172456	UCACAGU	ENST00000262189.6|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C 	ENST00000355193.2|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C
hg19_v2_chr4_-_53525406_53525502	0.172112	UCACAGU	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr3_-_52931557_52931623	0.171944	UCACAGU	ENST00000504329.1|TMEM110-MUSTN1|ENSG00000248592.3|TMEM110-MUSTN1 readthrough 	ENST00000355083.5|TMEM110|ENSG00000213533.7|transmembrane protein 110
hg19_v2_chr8_+_1922024_1922069	0.171643	UCACAGU	ENST00000320248.3|KBTBD11|ENSG00000176595.3|kelch repeat and BTB (POZ) domain containing 11
hg19_v2_chr4_+_184826418_184826522	0.170906	UCACAGU	ENST00000308497.4|STOX2|ENSG00000173320.5|storkhead box 2 	ENST00000438269.1|STOX2|ENSG00000173320.5|storkhead box 2
hg19_v2_chr9_-_37576226_37576250	0.170351	UCACAGU	ENST00000432825.2|FBXO10|ENSG00000147912.8|F-box protein 10
hg19_v2_chr1_+_203274639_203274664	0.170028	UCACAGU	ENST00000290551.4|BTG2|ENSG00000159388.5|BTG family, member 2
hg19_v2_chr10_-_113943447_113943536	0.167715	UCACAGU	ENST00000369425.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000348367.4|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000423155.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial
hg19_v2_chr2_+_242641442_242641478	0.167581	UCACAGU	ENST00000313552.6|ING5|ENSG00000168395.10|inhibitor of growth family, member 5 	ENST00000406941.1|ING5|ENSG00000168395.10|inhibitor of growth family, member 5
hg19_v2_chr10_+_60272814_60272900	0.163266	UCACAGU	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr11_-_86666427_86666450	0.163225	UCACAGU	ENST00000531380.1|FZD4|ENSG00000174804.3|frizzled family receptor 4
hg19_v2_chr17_-_46692287_46692317	0.162738	UCACAGU	ENST00000239144.4|HOXB8|ENSG00000120068.5|homeobox B8
hg19_v2_chr3_+_150804676_150804697	0.162704	UCACAGU	ENST00000474524.1|MED12L|ENSG00000144893.8|mediator complex subunit 12-like 	ENST00000273432.4|MED12L|ENSG00000144893.8|mediator complex subunit 12-like
hg19_v2_chr1_-_35658736_35658754	0.162137	UCACAGU	ENST00000357214.5|SFPQ|ENSG00000116560.6|splicing factor proline/glutamine-rich
hg19_v2_chr9_+_130830451_130830572	0.161259	UCACAGU	ENST00000373068.2|SLC25A25|ENSG00000148339.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 	ENST00000373069.5|SLC25A25|ENSG00000148339.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg19_v2_chr2_+_163200598_163200667	0.161107	UCACAGU	ENST00000437150.2|GCA|ENSG00000115271.6|grancalcin, EF-hand calcium binding protein 	ENST00000453113.2|GCA|ENSG00000115271.6|grancalcin, EF-hand calcium binding protein
hg19_v2_chr12_-_75905374_75905420	0.160346	UCACAGU	ENST00000438169.2|KRR1|ENSG00000111615.8|KRR1, small subunit (SSU) processome component, homolog (yeast) 	ENST00000229214.4|KRR1|ENSG00000111615.8|KRR1, small subunit (SSU) processome component, homolog (yeast)
hg19_v2_chr12_+_133066137_133066137	0.159376	UCACAGU	ENST00000434748.2|FBRSL1|ENSG00000112787.8|fibrosin-like 1
hg19_v2_chr5_+_10353780_10353890	0.159247	UCACAGU	ENST00000449913.2|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000503788.1|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000274140.5|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase
hg19_v2_chr3_-_186080012_186080030	0.158868	UCACAGU	ENST00000544847.1|DGKG|ENSG00000058866.10|diacylglycerol kinase, gamma 90kDa 	ENST00000265022.3|DGKG|ENSG00000058866.10|diacylglycerol kinase, gamma 90kDa
hg19_v2_chr6_-_136610911_136610990	0.158636	UCACAGU	ENST00000530767.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000527759.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000527536.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000529826.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000531224.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000353331.4|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1
hg19_v2_chr19_-_2721412_2721419	0.158552	UCACAGU	ENST00000323469.4|DIRAS1|ENSG00000176490.4|DIRAS family, GTP-binding RAS-like 1
hg19_v2_chr18_-_30050395_30050495	0.15815	UCACAGU	ENST00000269209.6|GAREM|ENSG00000141441.11|GRB2 associated, regulator of MAPK1 	ENST00000399218.4|GAREM|ENSG00000141441.11|GRB2 associated, regulator of MAPK1
hg19_v2_chr17_-_50237343_50237373	0.155949	UCACAGU	ENST00000575181.1|CA10|ENSG00000154975.9|carbonic anhydrase X 	ENST00000570565.1|CA10|ENSG00000154975.9|carbonic anhydrase X
hg19_v2_chr1_+_113933581_113933611	0.155635	UCACAGU	ENST00000307546.9|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3 	ENST00000369615.1|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3 	ENST00000369611.4|MAGI3|ENSG00000081026.14|membrane associated guanylate kinase, WW and PDZ domain containing 3
hg19_v2_chr20_-_41818373_41818527	0.155311	UCACAGU	ENST00000373187.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000356100.2|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000373184.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T 	ENST00000373190.1|PTPRT|ENSG00000196090.8|protein tyrosine phosphatase, receptor type, T
hg19_v2_chr5_+_82767284_82767310	0.153542	UCACAGU	ENST00000265077.3|VCAN|ENSG00000038427.11|versican
hg19_v2_chr1_+_35734562_35734573	0.153447	UCACAGU	ENST00000314607.6|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4 	ENST00000373297.2|ZMYM4|ENSG00000146463.7|zinc finger, MYM-type 4
hg19_v2_chr14_+_55493920_55494013	0.153136	UCACAGU	ENST00000395472.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4 	ENST00000555846.1|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chr2_-_11606275_11606289	0.152989	UCACAGU	ENST00000381525.3|E2F6|ENSG00000169016.12|E2F transcription factor 6 	ENST00000362009.4|E2F6|ENSG00000169016.12|E2F transcription factor 6
hg19_v2_chr5_-_111093406_111093458	0.152901	UCACAGU	ENST00000379671.3|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr16_-_66730583_66730689	0.152206	UCACAGU	ENST00000330687.4|CMTM4|ENSG00000183723.8|CKLF-like MARVEL transmembrane domain containing 4 	ENST00000394106.2|CMTM4|ENSG00000183723.8|CKLF-like MARVEL transmembrane domain containing 4 	ENST00000563952.1|CMTM4|ENSG00000183723.8|CKLF-like MARVEL transmembrane domain containing 4
hg19_v2_chr12_+_3600356_3600406	0.151922	UCACAGU	ENST00000382622.3|PRMT8|ENSG00000111218.7|protein arginine methyltransferase 8
hg19_v2_chr11_+_14665263_14665274	0.151596	UCACAGU	ENST00000282096.4|PDE3B|ENSG00000152270.4|phosphodiesterase 3B, cGMP-inhibited
hg19_v2_chr3_+_16926441_16926463	0.150967	UCACAGU	ENST00000418129.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2 	ENST00000396755.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2
hg19_v2_chr2_-_38303218_38303323	0.148792	UCACAGU	ENST00000407341.1|CYP1B1|ENSG00000138061.7|cytochrome P450, family 1, subfamily B, polypeptide 1 	ENST00000260630.3|CYP1B1|ENSG00000138061.7|cytochrome P450, family 1, subfamily B, polypeptide 1
hg19_v2_chr2_-_24149977_24150007	0.147921	UCACAGU	ENST00000238789.5|ATAD2B|ENSG00000119778.10|ATPase family, AAA domain containing 2B
hg19_v2_chr10_-_52383644_52383743	0.147135	UCACAGU	ENST00000361781.2|SGMS1|ENSG00000198964.9|sphingomyelin synthase 1
hg19_v2_chr16_+_57126428_57126450	0.146857	UCACAGU	ENST00000290776.8|CPNE2|ENSG00000140848.12|copine II
hg19_v2_chr1_+_27561007_27561061	0.146275	UCACAGU	ENST00000319394.3|WDTC1|ENSG00000142784.11|WD and tetratricopeptide repeats 1
hg19_v2_chr16_-_70719925_70719989	0.145676	UCACAGU	ENST00000338779.6|MTSS1L|ENSG00000132613.10|metastasis suppressor 1-like
hg19_v2_chrX_+_14547632_14547682	0.144642	UCACAGU	ENST00000218075.4|GLRA2|ENSG00000101958.9|glycine receptor, alpha 2
hg19_v2_chr3_+_52444651_52444697	0.144222	UCACAGU	ENST00000327906.3|PHF7|ENSG00000010318.15|PHD finger protein 7
hg19_v2_chr2_-_200322723_200322819	0.143573	UCACAGU	ENST00000417098.1|SATB2|ENSG00000119042.12|SATB homeobox 2
hg19_v2_chr10_+_22610124_22610188	0.14187	UCACAGU	ENST00000376663.3|BMI1|ENSG00000168283.9|BMI1 polycomb ring finger oncogene
hg19_v2_chr9_+_976964_976964	0.141386	UCACAGU	ENST00000190165.2|DMRT3|ENSG00000064218.4|doublesex and mab-3 related transcription factor 3
hg19_v2_chr2_-_111334678_111334762	0.140911	UCACAGU	ENST00000329516.3|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6 	ENST00000330331.5|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6 	ENST00000446930.1|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6
hg19_v2_chr1_+_57110972_57111062	0.140904	UCACAGU	ENST00000371244.4|PRKAA2|ENSG00000162409.6|protein kinase, AMP-activated, alpha 2 catalytic subunit
hg19_v2_chr7_+_66386204_66386249	0.140838	UCACAGU	ENST00000341567.4|TMEM248|ENSG00000106609.12|transmembrane protein 248 	ENST00000607045.1|TMEM248|ENSG00000106609.12|transmembrane protein 248
hg19_v2_chr19_+_17581253_17581352	0.140721	UCACAGU	ENST00000252595.7|SLC27A1|ENSG00000130304.12|solute carrier family 27 (fatty acid transporter), member 1 	ENST00000598424.1|SLC27A1|ENSG00000130304.12|solute carrier family 27 (fatty acid transporter), member 1
hg19_v2_chrX_-_67653614_67653657	0.138374	UCACAGU	ENST00000355520.5|OPHN1|ENSG00000079482.11|oligophrenin 1
hg19_v2_chr10_+_88516396_88516426	0.137243	UCACAGU	ENST00000372037.3|BMPR1A|ENSG00000107779.7|bone morphogenetic protein receptor, type IA
hg19_v2_chr10_+_104535994_104536014	0.136913	UCACAGU	ENST00000369889.4|WBP1L|ENSG00000166272.12|WW domain binding protein 1-like
hg19_v2_chr5_+_139493665_139493718	0.136848	UCACAGU	ENST00000331327.3|PURA|ENSG00000185129.4|purine-rich element binding protein A
hg19_v2_chr16_-_12009735_12009793	0.136251	UCACAGU	ENST00000439887.2|GSPT1|ENSG00000103342.8|G1 to S phase transition 1 	ENST00000434724.2|GSPT1|ENSG00000103342.8|G1 to S phase transition 1
hg19_v2_chr20_+_43514315_43514319	0.135965	UCACAGU	ENST00000353703.4|YWHAB|ENSG00000166913.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
hg19_v2_chr11_+_120107344_120107351	0.134745	UCACAGU	ENST00000260264.4|POU2F3|ENSG00000137709.5|POU class 2 homeobox 3
hg19_v2_chr10_-_32636106_32636150	0.134241	UCACAGU	ENST00000263062.8|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila) 	ENST00000319778.6|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila)
hg19_v2_chr4_+_79697495_79697538	0.133414	UCACAGU	ENST00000502871.1|BMP2K|ENSG00000138756.13|BMP2 inducible kinase 	ENST00000335016.5|BMP2K|ENSG00000138756.13|BMP2 inducible kinase
hg19_v2_chr10_-_13570533_13570533	0.132867	UCACAGU	ENST00000396900.2|BEND7|ENSG00000165626.12|BEN domain containing 7 	ENST00000396898.2|BEND7|ENSG00000165626.12|BEN domain containing 7
hg19_v2_chr18_+_2655692_2655737	0.131046	UCACAGU	ENST00000320876.6|SMCHD1|ENSG00000101596.10|structural maintenance of chromosomes flexible hinge domain containing 1
hg19_v2_chr21_-_43346790_43346823	0.130923	UCACAGU	ENST00000329623.7|C2CD2|ENSG00000157617.12|C2 calcium-dependent domain containing 2
hg19_v2_chr5_+_71403061_71403169	0.129016	UCACAGU	ENST00000512974.1|MAP1B|ENSG00000131711.10|microtubule-associated protein 1B 	ENST00000296755.7|MAP1B|ENSG00000131711.10|microtubule-associated protein 1B
hg19_v2_chr1_+_162531294_162531332	0.128159	UCACAGU	ENST00000367926.4|UAP1|ENSG00000117143.9|UDP-N-acteylglucosamine pyrophosphorylase 1 	ENST00000271469.3|UAP1|ENSG00000117143.9|UDP-N-acteylglucosamine pyrophosphorylase 1
hg19_v2_chr6_-_46293378_46293415	0.128109	UCACAGU	ENST00000330430.6|RCAN2|ENSG00000172348.10|regulator of calcineurin 2
hg19_v2_chrX_+_37430822_37430914	0.126645	UCACAGU	ENST00000378621.3|LANCL3|ENSG00000147036.7|LanC lantibiotic synthetase component C-like 3 (bacterial) 	ENST00000378619.3|LANCL3|ENSG00000147036.7|LanC lantibiotic synthetase component C-like 3 (bacterial)
hg19_v2_chr2_-_25194963_25194976	0.126518	UCACAGU	ENST00000264711.2|DNAJC27|ENSG00000115137.7|DnaJ (Hsp40) homolog, subfamily C, member 27
hg19_v2_chr17_+_57408994_57409088	0.12591	UCACAGU	ENST00000312655.4|YPEL2|ENSG00000175155.4|yippee-like 2 (Drosophila)
hg19_v2_chr2_+_24714729_24714927	0.125671	UCACAGU	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr17_-_35969409_35969544	0.125228	UCACAGU	ENST00000394378.2|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000585472.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000591288.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000502449.2|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000345615.4|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000346661.4|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000585689.1|SYNRG|ENSG00000006114.11|synergin, gamma 	ENST00000339208.6|SYNRG|ENSG00000006114.11|synergin, gamma
hg19_v2_chr6_+_50786414_50786439	0.1247	UCACAGU	ENST00000344788.3|TFAP2B|ENSG00000008196.8|transcription factor AP-2 beta (activating enhancer binding protein 2 beta) 	ENST00000393655.3|TFAP2B|ENSG00000008196.8|transcription factor AP-2 beta (activating enhancer binding protein 2 beta) 	ENST00000263046.4|TFAP2B|ENSG00000008196.8|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)
hg19_v2_chr2_-_85555385_85555548	0.124356	UCACAGU	ENST00000377386.3|TGOLN2|ENSG00000152291.9|trans-golgi network protein 2
hg19_v2_chr11_-_67888671_67888774	0.122066	UCACAGU	ENST00000265689.4|CHKA|ENSG00000110721.7|choline kinase alpha
hg19_v2_chr3_+_54156664_54156694	0.121317	UCACAGU	ENST00000474759.1|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3 	ENST00000288197.5|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3
hg19_v2_chr15_-_82939157_82939157	0.120427	UCACAGU	ENST00000559949.1|RP13-996F3.5|ENSG00000215749.8|golgin A6 family-like 18
hg19_v2_chr19_+_48898132_48898132	0.120357	UCACAGU	ENST00000263269.3|GRIN2D|ENSG00000105464.3|glutamate receptor, ionotropic, N-methyl D-aspartate 2D
hg19_v2_chr4_-_39640700_39640712	0.119976	UCACAGU	ENST00000295958.5|SMIM14|ENSG00000163683.7|small integral membrane protein 14
hg19_v2_chr12_-_57400227_57400245	0.119571	UCACAGU	ENST00000300101.2|ZBTB39|ENSG00000166860.2|zinc finger and BTB domain containing 39
hg19_v2_chr22_+_31518938_31518986	0.119309	UCACAGU	ENST00000412985.1|INPP5J|ENSG00000185133.9|inositol polyphosphate-5-phosphatase J 	ENST00000331075.5|INPP5J|ENSG00000185133.9|inositol polyphosphate-5-phosphatase J 	ENST00000412277.2|INPP5J|ENSG00000185133.9|inositol polyphosphate-5-phosphatase J 	ENST00000420017.1|INPP5J|ENSG00000185133.9|inositol polyphosphate-5-phosphatase J 	ENST00000400294.2|INPP5J|ENSG00000185133.9|inositol polyphosphate-5-phosphatase J 	ENST00000405300.1|INPP5J|ENSG00000185133.9|inositol polyphosphate-5-phosphatase J 	ENST00000404390.3|INPP5J|ENSG00000185133.9|inositol polyphosphate-5-phosphatase J
hg19_v2_chr15_-_82641706_82641706	0.118633	UCACAGU	ENST00000439287.4|GOLGA6L10|ENSG00000205281.6|golgin A6 family-like 10
hg19_v2_chr2_+_162272605_162272753	0.118577	UCACAGU	ENST00000389554.3|TBR1|ENSG00000136535.10|T-box, brain, 1
hg19_v2_chr12_-_93835665_93835750	0.118435	UCACAGU	ENST00000552442.1|UBE2N|ENSG00000177889.5|ubiquitin-conjugating enzyme E2N 	ENST00000550657.1|UBE2N|ENSG00000177889.5|ubiquitin-conjugating enzyme E2N
hg19_v2_chr9_-_140196703_140196744	0.116643	UCACAGU	ENST00000356628.2|NRARP|ENSG00000198435.2|NOTCH-regulated ankyrin repeat protein
hg19_v2_chr8_-_98290087_98290197	0.116372	UCACAGU	ENST00000322128.3|TSPYL5|ENSG00000180543.3|TSPY-like 5
hg19_v2_chr2_-_100721178_100721307	0.11571	UCACAGU	ENST00000409236.2|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3
hg19_v2_chr7_-_43965937_43966015	0.115426	UCACAGU	ENST00000455877.1|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000223341.7|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000447717.3|URGCP|ENSG00000106608.12|upregulator of cell proliferation 	ENST00000426198.1|URGCP|ENSG00000106608.12|upregulator of cell proliferation
hg19_v2_chr10_-_119806085_119806114	0.115107	UCACAGU	ENST00000355624.3|RAB11FIP2|ENSG00000107560.6|RAB11 family interacting protein 2 (class I)
hg19_v2_chr2_+_208394616_208394655	0.11484	UCACAGU	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr5_+_32585605_32585706	0.113595	UCACAGU	ENST00000265073.4|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000515355.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000502897.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae) 	ENST00000510442.1|SUB1|ENSG00000113387.7|SUB1 homolog (S. cerevisiae)
hg19_v2_chr3_+_137906109_137906153	0.113564	UCACAGU	ENST00000481646.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000469044.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000491704.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000461600.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8
hg19_v2_chr12_-_42538657_42538720	0.112824	UCACAGU	ENST00000398675.3|GXYLT1|ENSG00000151233.6|glucoside xylosyltransferase 1
hg19_v2_chr11_-_67980744_67980882	0.112581	UCACAGU	ENST00000401547.2|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000453170.1|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila) 	ENST00000304363.4|SUV420H1|ENSG00000110066.10|suppressor of variegation 4-20 homolog 1 (Drosophila)
hg19_v2_chrX_+_49687216_49687265	0.112126	UCACAGU	ENST00000376088.3|CLCN5|ENSG00000171365.11|chloride channel, voltage-sensitive 5
hg19_v2_chr3_+_32859510_32859546	0.112103	UCACAGU	ENST00000383763.5|TRIM71|ENSG00000206557.5|tripartite motif containing 71, E3 ubiquitin protein ligase
hg19_v2_chr14_-_78083112_78083140	0.111978	UCACAGU	ENST00000216484.2|SPTLC2|ENSG00000100596.2|serine palmitoyltransferase, long chain base subunit 2
hg19_v2_chr9_-_135819987_135820020	0.111715	UCACAGU	ENST00000298552.3|TSC1|ENSG00000165699.9|tuberous sclerosis 1 	ENST00000403810.1|TSC1|ENSG00000165699.9|tuberous sclerosis 1
hg19_v2_chr1_-_205091115_205091148	0.11151	UCACAGU	ENST00000264515.6|RBBP5|ENSG00000117222.9|retinoblastoma binding protein 5 	ENST00000367164.1|RBBP5|ENSG00000117222.9|retinoblastoma binding protein 5
hg19_v2_chr6_+_41514078_41514164	0.111473	UCACAGU	ENST00000373063.3|FOXP4|ENSG00000137166.10|forkhead box P4 	ENST00000373060.1|FOXP4|ENSG00000137166.10|forkhead box P4
hg19_v2_chr13_+_33160553_33160564	0.110213	UCACAGU	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr3_-_171178157_171178225	0.110006	UCACAGU	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr1_+_15943995_15944014	0.109972	UCACAGU	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr17_+_30264014_30264086	0.109882	UCACAGU	ENST00000322652.5|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit 	ENST00000580398.1|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit
hg19_v2_chrX_+_142967173_142967173	0.10946	UCACAGU	ENST00000370494.1|UBE2NL|ENSG00000102069.3|ubiquitin-conjugating enzyme E2N-like
hg19_v2_chr18_-_45456930_45456970	0.108774	UCACAGU	ENST00000262160.6|SMAD2|ENSG00000175387.11|SMAD family member 2 	ENST00000587269.1|SMAD2|ENSG00000175387.11|SMAD family member 2
hg19_v2_chr15_-_83018198_83018198	0.108668	UCACAGU	ENST00000557886.1|RP13-996F3.4|ENSG00000259243.1|golgin A6 family-like 19
hg19_v2_chr11_+_13299186_13299432	0.108403	UCACAGU	ENST00000527998.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000396441.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000533520.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529825.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389707.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000401424.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000529388.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000530357.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403290.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000361003.4|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000389708.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000403510.3|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like 	ENST00000482049.1|ARNTL|ENSG00000133794.13|aryl hydrocarbon receptor nuclear translocator-like
hg19_v2_chr10_+_1095416_1095482	0.107774	UCACAGU	ENST00000358220.1|WDR37|ENSG00000047056.10|WD repeat domain 37
hg19_v2_chr15_+_59730348_59730435	0.106945	UCACAGU	ENST00000288228.5|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A 	ENST00000559628.1|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A 	ENST00000557914.1|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A 	ENST00000560474.1|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A
hg19_v2_chr18_+_49866496_49866548	0.106693	UCACAGU	ENST00000442544.2|DCC|ENSG00000187323.7|deleted in colorectal carcinoma
hg19_v2_chr2_-_191399426_191399475	0.105647	UCACAGU	ENST00000409150.3|TMEM194B|ENSG00000189362.7|transmembrane protein 194B
hg19_v2_chr19_+_1286097_1286153	0.104608	UCACAGU	ENST00000215368.2|EFNA2|ENSG00000099617.2|ephrin-A2
hg19_v2_chr2_-_68479614_68479685	0.104572	UCACAGU	ENST00000234310.3|PPP3R1|ENSG00000221823.6|protein phosphatase 3, regulatory subunit B, alpha
hg19_v2_chr1_+_11072696_11072735	0.10453	UCACAGU	ENST00000240185.3|TARDBP|ENSG00000120948.11|TAR DNA binding protein 	ENST00000476201.1|TARDBP|ENSG00000120948.11|TAR DNA binding protein
hg19_v2_chr18_-_29522989_29523104	0.104064	UCACAGU	ENST00000582539.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000283351.4|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8 	ENST00000582513.1|TRAPPC8|ENSG00000153339.9|trafficking protein particle complex 8
hg19_v2_chr8_+_16884740_16884804	0.103724	UCACAGU	ENST00000318063.5|MICU3|ENSG00000155970.7|mitochondrial calcium uptake family, member 3
hg19_v2_chr7_-_31380502_31380515	0.103674	UCACAGU	ENST00000297142.3|NEUROD6|ENSG00000164600.4|neuronal differentiation 6
hg19_v2_chr16_-_3493528_3493542	0.103271	UCACAGU	ENST00000301744.4|ZNF597|ENSG00000167981.4|zinc finger protein 597
hg19_v2_chr11_-_108369101_108369159	0.102882	UCACAGU	ENST00000323468.5|KDELC2|ENSG00000178202.8|KDEL (Lys-Asp-Glu-Leu) containing 2
hg19_v2_chr3_+_36421826_36421844	0.102266	UCACAGU	ENST00000273183.3|STAC|ENSG00000144681.6|SH3 and cysteine rich domain
hg19_v2_chr1_-_31196427_31196434	0.101366	UCACAGU	ENST00000373765.4|MATN1|ENSG00000162510.5|matrilin 1, cartilage matrix protein
hg19_v2_chr8_-_42698433_42698486	0.10082	UCACAGU	ENST00000345117.2|THAP1|ENSG00000131931.4|THAP domain containing, apoptosis associated protein 1 	ENST00000254250.3|THAP1|ENSG00000131931.4|THAP domain containing, apoptosis associated protein 1
hg19_v2_chr2_-_190927447_190927466	0.100031	UCACAGU	ENST00000260950.4|MSTN|ENSG00000138379.4|myostatin
hg19_v2_chrX_-_55515635_55515635	0.0996424	UCACAGU	ENST00000500968.3|USP51|ENSG00000247746.4|ubiquitin specific peptidase 51
hg19_v2_chr7_+_114055052_114055378	0.0993737	UCACAGU	ENST00000462331.1|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000408937.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000403559.4|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000350908.4|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393498.2|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393495.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000378237.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393489.3|FOXP2|ENSG00000128573.18|forkhead box P2
hg19_v2_chr21_-_28338732_28338832	0.0982139	UCACAGU	ENST00000284987.5|ADAMTS5|ENSG00000154736.5|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg19_v2_chr4_+_140222609_140222742	0.0973242	UCACAGU	ENST00000296543.5|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit 	ENST00000398947.1|NAA15|ENSG00000164134.8|N(alpha)-acetyltransferase 15, NatA auxiliary subunit
hg19_v2_chr11_+_58939965_58939965	0.0971049	UCACAGU	ENST00000227451.3|DTX4|ENSG00000110042.3|deltex homolog 4 (Drosophila)
hg19_v2_chr5_-_179780312_179780387	0.0964684	UCACAGU	ENST00000253778.8|GFPT2|ENSG00000131459.8|glutamine-fructose-6-phosphate transaminase 2
hg19_v2_chr5_+_110559784_110559803	0.0961142	UCACAGU	ENST00000282356.4|CAMK4|ENSG00000152495.6|calcium/calmodulin-dependent protein kinase IV
hg19_v2_chr15_-_27018175_27018241	0.0959922	UCACAGU	ENST00000311550.5|GABRB3|ENSG00000166206.9|gamma-aminobutyric acid (GABA) A receptor, beta 3
hg19_v2_chr2_+_7057523_7057613	0.0959037	UCACAGU	ENST00000320892.6|RNF144A|ENSG00000151692.10|ring finger protein 144A
hg19_v2_chr4_+_20255123_20255213	0.0958466	UCACAGU	ENST00000504154.1|SLIT2|ENSG00000145147.15|slit homolog 2 (Drosophila) 	ENST00000273739.5|SLIT2|ENSG00000145147.15|slit homolog 2 (Drosophila)
hg19_v2_chr7_+_77325738_77325789	0.094594	UCACAGU	ENST00000334955.8|RSBN1L|ENSG00000187257.10|round spermatid basic protein 1-like
hg19_v2_chr1_+_76540386_76540445	0.092727	UCACAGU	ENST00000328299.3|ST6GALNAC3|ENSG00000184005.9|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
hg19_v2_chr6_+_138188551_138188719	0.0927054	UCACAGU	ENST00000237289.4|TNFAIP3|ENSG00000118503.10|tumor necrosis factor, alpha-induced protein 3 	ENST00000433680.1|TNFAIP3|ENSG00000118503.10|tumor necrosis factor, alpha-induced protein 3
hg19_v2_chr9_-_127533519_127533576	0.092653	UCACAGU	ENST00000487099.2|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000344523.4|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000373584.3|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1
hg19_v2_chr12_-_109747023_109747033	0.0924461	UCACAGU	ENST00000355216.1|FOXN4|ENSG00000139445.13|forkhead box N4 	ENST00000299162.5|FOXN4|ENSG00000139445.13|forkhead box N4
hg19_v2_chr13_-_50367057_50367142	0.0923505	UCACAGU	ENST00000261667.3|KPNA3|ENSG00000102753.5|karyopherin alpha 3 (importin alpha 4)
hg19_v2_chr5_-_31532160_31532221	0.0920277	UCACAGU	ENST00000511367.2|DROSHA|ENSG00000113360.12|drosha, ribonuclease type III 	ENST00000513349.1|DROSHA|ENSG00000113360.12|drosha, ribonuclease type III
hg19_v2_chr10_+_70320413_70320413	0.091625	UCACAGU	ENST00000373644.4|TET1|ENSG00000138336.8|tet methylcytosine dioxygenase 1
hg19_v2_chr10_+_22605304_22605372	0.0914954	UCACAGU	ENST00000475460.2|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough 	ENST00000602390.1|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough 	ENST00000456711.1|COMMD3|ENSG00000148444.11|COMM domain containing 3 	ENST00000444869.1|COMMD3|ENSG00000148444.11|COMM domain containing 3 	ENST00000489125.2|COMMD3-BMI1|ENSG00000269897.1|COMMD3-BMI1 readthrough
hg19_v2_chr10_-_65225722_65225755	0.0910317	UCACAGU	ENST00000399251.1|JMJD1C|ENSG00000171988.13|jumonji domain containing 1C
hg19_v2_chr19_-_6424783_6424805	0.0907995	UCACAGU	ENST00000398148.3|KHSRP|ENSG00000088247.11|KH-type splicing regulatory protein
hg19_v2_chr7_-_141401951_141401985	0.0903914	UCACAGU	ENST00000536163.1|KIAA1147|ENSG00000257093.2|KIAA1147
hg19_v2_chr11_-_77532050_77532066	0.0901822	UCACAGU	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr4_+_170541660_170541677	0.0901812	UCACAGU	ENST00000513761.1|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3 	ENST00000347613.4|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3
hg19_v2_chr11_-_10315741_10315773	0.0901778	UCACAGU	ENST00000256190.8|SBF2|ENSG00000133812.10|SET binding factor 2
hg19_v2_chr6_-_17706618_17706666	0.0901344	UCACAGU	ENST00000262077.2|NUP153|ENSG00000124789.7|nucleoporin 153kDa 	ENST00000537253.1|NUP153|ENSG00000124789.7|nucleoporin 153kDa
hg19_v2_chr18_+_9136758_9136852	0.0895519	UCACAGU	ENST00000383440.2|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000262126.4|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000577992.1|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12
hg19_v2_chr3_-_21792838_21792927	0.0893647	UCACAGU	ENST00000281523.2|ZNF385D|ENSG00000151789.5|zinc finger protein 385D
hg19_v2_chr4_-_71705590_71705662	0.0886467	UCACAGU	ENST00000254799.6|GRSF1|ENSG00000132463.9|G-rich RNA sequence binding factor 1
hg19_v2_chr5_-_56247935_56247959	0.0886004	UCACAGU	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr8_-_74791051_74791145	0.0881464	UCACAGU	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr20_+_60718785_60718853	0.0879103	UCACAGU	ENST00000421564.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000450482.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000331758.3|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1
hg19_v2_chr14_-_91526922_91527001	0.0870897	UCACAGU	ENST00000418736.2|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5 	ENST00000261991.3|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5
hg19_v2_chr15_+_41221536_41221591	0.0865081	UCACAGU	ENST00000249749.5|DLL4|ENSG00000128917.5|delta-like 4 (Drosophila)
hg19_v2_chr10_+_111767720_111767752	0.0856609	UCACAGU	ENST00000356080.4|ADD3|ENSG00000148700.9|adducin 3 (gamma) 	ENST00000277900.8|ADD3|ENSG00000148700.9|adducin 3 (gamma)
hg19_v2_chr1_+_32930647_32930684	0.0855379	UCACAGU	ENST00000609129.1|ZBTB8B|ENSG00000273274.1|zinc finger and BTB domain containing 8B
hg19_v2_chr7_+_36192758_36192827	0.0854577	UCACAGU	ENST00000242108.4|EEPD1|ENSG00000122547.6|endonuclease/exonuclease/phosphatase family domain containing 1
hg19_v2_chr4_+_56815102_56815147	0.084889	UCACAGU	ENST00000257287.4|CEP135|ENSG00000174799.6|centrosomal protein 135kDa
hg19_v2_chr8_-_75233563_75233681	0.0846435	UCACAGU	ENST00000342232.4|JPH1|ENSG00000104369.4|junctophilin 1
hg19_v2_chr3_+_73045936_73046128	0.0841526	UCACAGU	ENST00000356692.5|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000488810.1|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000394284.3|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000295862.9|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2 	ENST00000495566.1|PPP4R2|ENSG00000163605.10|protein phosphatase 4, regulatory subunit 2
hg19_v2_chrX_+_105066524_105066552	0.0836443	UCACAGU	ENST00000243300.9|NRK|ENSG00000123572.12|Nik related kinase 	ENST00000428173.2|NRK|ENSG00000123572.12|Nik related kinase
hg19_v2_chr3_+_15247686_15247784	0.0835005	UCACAGU	ENST00000253693.2|CAPN7|ENSG00000131375.5|calpain 7
hg19_v2_chr17_+_72983674_72983768	0.0825921	UCACAGU	ENST00000337231.5|CDR2L|ENSG00000109089.7|cerebellar degeneration-related protein 2-like
hg19_v2_chr5_+_65018017_65018088	0.0819008	UCACAGU	ENST00000380985.5|NLN|ENSG00000123213.18|neurolysin (metallopeptidase M3 family) 	ENST00000502464.1|NLN|ENSG00000123213.18|neurolysin (metallopeptidase M3 family)
hg19_v2_chr3_+_32147997_32148009	0.0817356	UCACAGU	ENST00000282541.5|GPD1L|ENSG00000152642.6|glycerol-3-phosphate dehydrogenase 1-like
hg19_v2_chr17_+_59529743_59529798	0.0809802	UCACAGU	ENST00000589003.1|TBX4|ENSG00000121075.5|T-box 4 	ENST00000393853.4|TBX4|ENSG00000121075.5|T-box 4
hg19_v2_chr15_+_40733387_40733416	0.0799889	UCACAGU	ENST00000416165.1|BAHD1|ENSG00000140320.7|bromo adjacent homology domain containing 1
hg19_v2_chr3_-_113415441_113415500	0.078759	UCACAGU	ENST00000491165.1|KIAA2018|ENSG00000176542.5|KIAA2018 	ENST00000316407.4|KIAA2018|ENSG00000176542.5|KIAA2018
hg19_v2_chr5_+_173315283_173315335	0.0786639	UCACAGU	ENST00000265085.5|CPEB4|ENSG00000113742.8|cytoplasmic polyadenylation element binding protein 4
hg19_v2_chr22_+_31608219_31608303	0.0785192	UCACAGU	ENST00000406516.1|LIMK2|ENSG00000182541.13|LIM domain kinase 2 	ENST00000444929.2|LIMK2|ENSG00000182541.13|LIM domain kinase 2 	ENST00000331728.4|LIMK2|ENSG00000182541.13|LIM domain kinase 2
hg19_v2_chr10_-_70287231_70287290	0.0784403	UCACAGU	ENST00000609923.1|SLC25A16|ENSG00000122912.10|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16
hg19_v2_chr10_+_97803151_97803348	0.0780294	UCACAGU	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr17_+_47572647_47572662	0.0777449	UCACAGU	ENST00000172229.3|NGFR|ENSG00000064300.4|nerve growth factor receptor
hg19_v2_chr12_+_83080659_83080693	0.0773893	UCACAGU	ENST00000321196.3|TMTC2|ENSG00000179104.4|transmembrane and tetratricopeptide repeat containing 2
hg19_v2_chr17_-_73389737_73389765	0.0773787	UCACAGU	ENST00000392563.1|GRB2|ENSG00000177885.9|growth factor receptor-bound protein 2
hg19_v2_chr17_+_12569306_12569344	0.0772563	UCACAGU	ENST00000425538.1|MYOCD|ENSG00000141052.13|myocardin
hg19_v2_chr11_+_110300607_110300692	0.0770767	UCACAGU	ENST00000260270.2|FDX1|ENSG00000137714.2|ferredoxin 1
hg19_v2_chr4_+_52709229_52709345	0.0770289	UCACAGU	ENST00000334635.5|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381441.3|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381437.4|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4
hg19_v2_chr17_-_73775839_73775868	0.0765939	UCACAGU	ENST00000592643.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000591890.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000587171.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000254810.4|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000589599.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B)
hg19_v2_chr21_+_45285050_45285069	0.0765064	UCACAGU	ENST00000291572.8|AGPAT3|ENSG00000160216.14|1-acylglycerol-3-phosphate O-acyltransferase 3
hg19_v2_chr2_+_155554797_155554837	0.0761218	UCACAGU	ENST00000295101.2|KCNJ3|ENSG00000162989.3|potassium inwardly-rectifying channel, subfamily J, member 3
hg19_v2_chr12_+_65004292_65004306	0.0757666	UCACAGU	ENST00000542104.1|RASSF3|ENSG00000153179.7|Ras association (RalGDS/AF-6) domain family member 3 	ENST00000336061.2|RASSF3|ENSG00000153179.7|Ras association (RalGDS/AF-6) domain family member 3
hg19_v2_chr16_+_22019404_22019604	0.0756687	UCACAGU	ENST00000542527.2|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000569656.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52 	ENST00000562695.1|C16orf52|ENSG00000185716.7|chromosome 16 open reading frame 52
hg19_v2_chr2_+_110551851_110551977	0.0733066	UCACAGU	ENST00000272454.6|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5 	ENST00000430736.1|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5 	ENST00000016946.3|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5 	ENST00000441344.1|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5
hg19_v2_chr19_-_36391434_36391564	0.0732631	UCACAGU	ENST00000396901.1|NFKBID|ENSG00000167604.9|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta 	ENST00000585925.1|NFKBID|ENSG00000167604.9|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta
hg19_v2_chrX_+_122993827_122993910	0.0731597	UCACAGU	ENST00000371199.3|XIAP|ENSG00000101966.8|X-linked inhibitor of apoptosis
hg19_v2_chr11_-_8985927_8986008	0.0730534	UCACAGU	ENST00000528117.1|TMEM9B|ENSG00000175348.6|TMEM9 domain family, member B 	ENST00000309134.5|TMEM9B|ENSG00000175348.6|TMEM9 domain family, member B
hg19_v2_chr11_-_62572901_62572964	0.0724679	UCACAGU	ENST00000439713.2|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000531131.1|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000530875.1|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000531709.2|NXF1|ENSG00000162231.9|nuclear RNA export factor 1 	ENST00000294172.2|NXF1|ENSG00000162231.9|nuclear RNA export factor 1
hg19_v2_chr13_+_108870714_108870780	0.0714866	UCACAGU	ENST00000375898.3|ABHD13|ENSG00000139826.5|abhydrolase domain containing 13
hg19_v2_chr17_+_45727204_45727220	0.0699301	UCACAGU	ENST00000290158.4|KPNB1|ENSG00000108424.5|karyopherin (importin) beta 1
hg19_v2_chr16_-_57219966_57220028	0.069363	UCACAGU	ENST00000565760.1|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A 	ENST00000309137.8|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A 	ENST00000570184.1|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A 	ENST00000562324.1|FAM192A|ENSG00000172775.12|family with sequence similarity 192, member A
hg19_v2_chr6_+_157099036_157099086	0.0691308	UCACAGU	ENST00000350026.5|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000346085.5|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000367148.1|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000275248.4|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like)
hg19_v2_chr2_-_69614373_69614397	0.0686585	UCACAGU	ENST00000361060.5|GFPT1|ENSG00000198380.8|glutamine--fructose-6-phosphate transaminase 1 	ENST00000357308.4|GFPT1|ENSG00000198380.8|glutamine--fructose-6-phosphate transaminase 1
hg19_v2_chr14_-_61116168_61116180	0.0681889	UCACAGU	ENST00000247182.6|SIX1|ENSG00000126778.7|SIX homeobox 1
hg19_v2_chr3_+_169684553_169684616	0.0679318	UCACAGU	ENST00000337002.4|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae) 	ENST00000480708.1|SEC62|ENSG00000008952.12|SEC62 homolog (S. cerevisiae)
hg19_v2_chr7_-_108096822_108096889	0.0677437	UCACAGU	ENST00000379028.3|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule 	ENST00000413765.2|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule 	ENST00000379022.4|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule
hg19_v2_chr3_-_135914615_135914701	0.0673406	UCACAGU	ENST00000309993.2|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr4_-_151936865_151936891	0.067091	UCACAGU	ENST00000535741.1|LRBA|ENSG00000198589.6|LPS-responsive vesicle trafficking, beach and anchor containing
hg19_v2_chr16_+_66914264_66914516	0.0666339	UCACAGU	ENST00000311765.2|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000568869.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000561704.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000568398.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2 	ENST00000566776.1|PDP2|ENSG00000172840.2|pyruvate dehyrogenase phosphatase catalytic subunit 2
hg19_v2_chr1_-_51763661_51763672	0.0666279	UCACAGU	ENST00000530004.1|TTC39A|ENSG00000085831.11|tetratricopeptide repeat domain 39A
hg19_v2_chr8_+_61591337_61591393	0.066094	UCACAGU	ENST00000423902.2|CHD7|ENSG00000171316.7|chromodomain helicase DNA binding protein 7
hg19_v2_chr5_-_93447333_93447386	0.0657339	UCACAGU	ENST00000395965.3|FAM172A|ENSG00000113391.12|family with sequence similarity 172, member A 	ENST00000505869.1|FAM172A|ENSG00000113391.12|family with sequence similarity 172, member A 	ENST00000509163.1|FAM172A|ENSG00000113391.12|family with sequence similarity 172, member A
hg19_v2_chr3_+_113465866_113465925	0.065456	UCACAGU	ENST00000273398.3|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000538620.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000496747.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 	ENST00000475322.1|ATP6V1A|ENSG00000114573.5|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
hg19_v2_chr18_+_54318616_54318640	0.0653801	UCACAGU	ENST00000254442.3|WDR7|ENSG00000091157.9|WD repeat domain 7
hg19_v2_chr13_-_41240717_41240735	0.0633835	UCACAGU	ENST00000379561.5|FOXO1|ENSG00000150907.6|forkhead box O1
hg19_v2_chr3_+_122513642_122513664	0.062638	UCACAGU	ENST00000261038.5|DIRC2|ENSG00000138463.8|disrupted in renal carcinoma 2
hg19_v2_chr17_-_53499310_53499353	0.0618184	UCACAGU	ENST00000262065.3|MMD|ENSG00000108960.3|monocyte to macrophage differentiation-associated
hg19_v2_chr22_-_32146106_32146141	0.0611914	UCACAGU	ENST00000327423.6|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000397493.2|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000434485.1|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000412743.1|PRR14L|ENSG00000183530.9|proline rich 14-like
hg19_v2_chr12_-_48499591_48499663	0.0606953	UCACAGU	ENST00000551330.1|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000004980.5|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000339976.6|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000448372.1|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1
hg19_v2_chr14_+_77564440_77564685	0.0606195	UCACAGU	ENST00000361786.2|KIAA1737|ENSG00000198894.3|CLOCK-interacting pacemaker 	ENST00000555437.1|KIAA1737|ENSG00000198894.3|CLOCK-interacting pacemaker 	ENST00000555611.1|KIAA1737|ENSG00000198894.3|CLOCK-interacting pacemaker 	ENST00000554658.1|KIAA1737|ENSG00000198894.3|CLOCK-interacting pacemaker
hg19_v2_chr1_+_193028552_193028589	0.0599673	UCACAGU	ENST00000400968.2|TROVE2|ENSG00000116747.8|TROVE domain family, member 2 	ENST00000432079.1|TROVE2|ENSG00000116747.8|TROVE domain family, member 2
hg19_v2_chr17_-_71088797_71088851	0.0598955	UCACAGU	ENST00000580557.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000579732.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000578620.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000542342.2|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000255559.3|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11 	ENST00000579018.1|SLC39A11|ENSG00000133195.7|solute carrier family 39, member 11
hg19_v2_chr9_+_129677039_129677119	0.0595502	UCACAGU	ENST00000259351.5|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000424082.2|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000394022.3|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000394011.3|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1 	ENST00000319107.4|RALGPS1|ENSG00000136828.14|Ral GEF with PH domain and SH3 binding motif 1
hg19_v2_chr12_-_53893399_53893478	0.059435	UCACAGU	ENST00000267079.2|MAP3K12|ENSG00000139625.8|mitogen-activated protein kinase kinase kinase 12
hg19_v2_chr7_+_74072011_74072119	0.0588898	UCACAGU	ENST00000324896.4|GTF2I|ENSG00000077809.8|general transcription factor IIi 	ENST00000353920.4|GTF2I|ENSG00000077809.8|general transcription factor IIi 	ENST00000346152.4|GTF2I|ENSG00000077809.8|general transcription factor IIi 	ENST00000416070.1|GTF2I|ENSG00000077809.8|general transcription factor IIi
hg19_v2_chr10_-_43903217_43903267	0.0582783	UCACAGU	ENST00000357065.4|HNRNPF|ENSG00000169813.12|heterogeneous nuclear ribonucleoprotein F
hg19_v2_chr9_+_109625378_109625458	0.0577525	UCACAGU	ENST00000277225.5|ZNF462|ENSG00000148143.8|zinc finger protein 462 	ENST00000457913.1|ZNF462|ENSG00000148143.8|zinc finger protein 462 	ENST00000472574.1|ZNF462|ENSG00000148143.8|zinc finger protein 462
hg19_v2_chr2_-_158485387_158485517	0.0575326	UCACAGU	ENST00000243349.8|ACVR1C|ENSG00000123612.11|activin A receptor, type IC
hg19_v2_chr1_-_154531095_154531119	0.057343	UCACAGU	ENST00000292211.4|UBE2Q1|ENSG00000160714.5|ubiquitin-conjugating enzyme E2Q family member 1
hg19_v2_chr11_-_118927816_118927868	0.0573407	UCACAGU	ENST00000534233.1|HYOU1|ENSG00000149428.14|hypoxia up-regulated 1 	ENST00000532752.1|HYOU1|ENSG00000149428.14|hypoxia up-regulated 1 	ENST00000525859.1|HYOU1|ENSG00000149428.14|hypoxia up-regulated 1 	ENST00000404233.3|HYOU1|ENSG00000149428.14|hypoxia up-regulated 1 	ENST00000532421.1|HYOU1|ENSG00000149428.14|hypoxia up-regulated 1 	ENST00000543287.1|HYOU1|ENSG00000149428.14|hypoxia up-regulated 1 	ENST00000527310.2|HYOU1|ENSG00000149428.14|hypoxia up-regulated 1 	ENST00000529972.1|HYOU1|ENSG00000149428.14|hypoxia up-regulated 1
hg19_v2_chr6_+_119215308_119215391	0.0573358	UCACAGU	ENST00000229595.5|ASF1A|ENSG00000111875.7|anti-silencing function 1A histone chaperone
hg19_v2_chr12_+_69004619_69004699	0.0567569	UCACAGU	ENST00000250559.9|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000393436.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000425247.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000489473.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000422358.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000541167.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538283.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000341355.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000537460.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000450214.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000545270.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538980.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000542018.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000543393.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family
hg19_v2_chr9_-_130533615_130533717	0.0567523	UCACAGU	ENST00000373277.4|SH2D3C|ENSG00000095370.15|SH2 domain containing 3C
hg19_v2_chr4_+_115519577_115519631	0.0551902	UCACAGU	ENST00000310836.6|UGT8|ENSG00000174607.6|UDP glycosyltransferase 8
hg19_v2_chr1_+_24286287_24286326	0.0546975	UCACAGU	ENST00000334351.7|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2 	ENST00000374468.1|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2
hg19_v2_chr11_-_60674037_60674079	0.05431	UCACAGU	ENST00000541371.1|PRPF19|ENSG00000110107.4|pre-mRNA processing factor 19 	ENST00000227524.4|PRPF19|ENSG00000110107.4|pre-mRNA processing factor 19
hg19_v2_chr4_-_24914508_24914524	0.0541278	UCACAGU	ENST00000504487.1|CCDC149|ENSG00000181982.13|coiled-coil domain containing 149
hg19_v2_chr19_+_15218180_15218249	0.0539337	UCACAGU	ENST00000342784.2|SYDE1|ENSG00000105137.8|synapse defective 1, Rho GTPase, homolog 1 (C. elegans) 	ENST00000597977.1|SYDE1|ENSG00000105137.8|synapse defective 1, Rho GTPase, homolog 1 (C. elegans) 	ENST00000600440.1|SYDE1|ENSG00000105137.8|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)
hg19_v2_chr1_+_229440129_229440129	0.0533193	UCACAGU	ENST00000366688.3|SPHAR|ENSG00000213029.2|S-phase response (cyclin related)
hg19_v2_chr17_-_60142609_60142657	0.0530549	UCACAGU	ENST00000397786.2|MED13|ENSG00000108510.5|mediator complex subunit 13
hg19_v2_chr2_-_178128528_178128574	0.0527659	UCACAGU	ENST00000397063.4|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2 	ENST00000421929.1|NFE2L2|ENSG00000116044.11|nuclear factor, erythroid 2-like 2
hg19_v2_chr22_+_51112800_51112852	0.0526358	UCACAGU	ENST00000414786.2|SHANK3|ENSG00000251322.3|SH3 and multiple ankyrin repeat domains 3
hg19_v2_chr17_+_60536002_60536040	0.0524261	UCACAGU	ENST00000582809.1|TLK2|ENSG00000146872.13|tousled-like kinase 2
hg19_v2_chr9_+_129089088_129089163	0.0521157	UCACAGU	ENST00000361171.3|MVB12B|ENSG00000196814.10|multivesicular body subunit 12B 	ENST00000545391.1|MVB12B|ENSG00000196814.10|multivesicular body subunit 12B
hg19_v2_chr8_+_19796381_19796482	0.0518304	UCACAGU	ENST00000524029.1|LPL|ENSG00000175445.10|lipoprotein lipase 	ENST00000522701.1|LPL|ENSG00000175445.10|lipoprotein lipase 	ENST00000311322.8|LPL|ENSG00000175445.10|lipoprotein lipase
hg19_v2_chr17_+_42148097_42148119	0.0509787	UCACAGU	ENST00000269097.4|G6PC3|ENSG00000141349.4|glucose 6 phosphatase, catalytic, 3
hg19_v2_chr17_+_61627814_61627871	0.0507526	UCACAGU	ENST00000310827.4|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7 	ENST00000431926.1|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7 	ENST00000415273.2|DCAF7|ENSG00000136485.10|DDB1 and CUL4 associated factor 7
hg19_v2_chrX_+_23352133_23352229	0.0506454	UCACAGU	ENST00000379361.4|PTCHD1|ENSG00000165186.9|patched domain containing 1
hg19_v2_chr9_+_114659046_114659102	0.0505762	UCACAGU	ENST00000374279.3|UGCG|ENSG00000148154.5|UDP-glucose ceramide glucosyltransferase
hg19_v2_chr4_+_41937131_41937211	0.0504357	UCACAGU	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr1_+_220701456_220701574	0.049846	UCACAGU	ENST00000366918.4|MARK1|ENSG00000116141.11|MAP/microtubule affinity-regulating kinase 1 	ENST00000402574.1|MARK1|ENSG00000116141.11|MAP/microtubule affinity-regulating kinase 1
hg19_v2_chr15_-_42749711_42749754	0.0497694	UCACAGU	ENST00000565611.1|ZNF106|ENSG00000103994.12|zinc finger protein 106 	ENST00000263805.4|ZNF106|ENSG00000103994.12|zinc finger protein 106 	ENST00000565948.1|ZNF106|ENSG00000103994.12|zinc finger protein 106
hg19_v2_chr2_-_160472952_160473080	0.0491412	UCACAGU	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr19_+_1249869_1249894	0.0488066	UCACAGU	ENST00000591446.2|MIDN|ENSG00000167470.8|midnolin
hg19_v2_chr3_-_142682178_142682178	0.0482732	UCACAGU	ENST00000340634.3|PAQR9|ENSG00000188582.4|progestin and adipoQ receptor family member IX
hg19_v2_chr17_+_54911444_54911564	0.0480987	UCACAGU	ENST00000284061.3|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa 	ENST00000572810.1|DGKE|ENSG00000153933.5|diacylglycerol kinase, epsilon 64kDa
hg19_v2_chr12_-_31945172_31945178	0.0480861	UCACAGU	ENST00000340398.3|H3F3C|ENSG00000188375.3|H3 histone, family 3C
hg19_v2_chr15_+_72947079_72947079	0.0476998	UCACAGU	ENST00000421285.3|GOLGA6B|ENSG00000215186.6|golgin A6 family, member B
hg19_v2_chr5_-_132948216_132948255	0.0470603	UCACAGU	ENST00000265342.7|FSTL4|ENSG00000053108.12|follistatin-like 4
hg19_v2_chr2_-_61765315_61765422	0.0463814	UCACAGU	ENST00000406957.1|XPO1|ENSG00000082898.12|exportin 1 (CRM1 homolog, yeast) 	ENST00000401558.2|XPO1|ENSG00000082898.12|exportin 1 (CRM1 homolog, yeast)
hg19_v2_chr14_+_52734401_52734530	0.0461915	UCACAGU	ENST00000306051.2|PTGDR|ENSG00000168229.3|prostaglandin D2 receptor (DP) 	ENST00000553372.1|PTGDR|ENSG00000168229.3|prostaglandin D2 receptor (DP)
hg19_v2_chr13_-_67804445_67804475	0.0460416	UCACAGU	ENST00000456367.1|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000377861.3|PCDH9|ENSG00000184226.10|protocadherin 9 	ENST00000544246.1|PCDH9|ENSG00000184226.10|protocadherin 9
hg19_v2_chr3_-_116164306_116164380	0.0459116	UCACAGU	ENST00000490035.2|LSAMP|ENSG00000185565.7|limbic system-associated membrane protein
hg19_v2_chr2_-_113191096_113191222	0.0453822	UCACAGU	ENST00000496537.1|RGPD8|ENSG00000169629.7|RANBP2-like and GRIP domain containing 8 	ENST00000330575.5|RGPD8|ENSG00000169629.7|RANBP2-like and GRIP domain containing 8 	ENST00000302558.3|RGPD8|ENSG00000169629.7|RANBP2-like and GRIP domain containing 8
hg19_v2_chr8_-_57123815_57123867	0.0451662	UCACAGU	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr19_-_47735918_47736023	0.0448789	UCACAGU	ENST00000449228.1|BBC3|ENSG00000105327.11|BCL2 binding component 3 	ENST00000300880.7|BBC3|ENSG00000105327.11|BCL2 binding component 3 	ENST00000341983.4|BBC3|ENSG00000105327.11|BCL2 binding component 3
hg19_v2_chr12_+_120884222_120884380	0.0446077	UCACAGU	ENST00000551765.1|GATC|ENSG00000257218.1|glutamyl-tRNA(Gln) amidotransferase, subunit C 	ENST00000229384.5|GATC|ENSG00000257218.1|glutamyl-tRNA(Gln) amidotransferase, subunit C
hg19_v2_chr14_-_58332774_58332786	0.0445427	UCACAGU	ENST00000556826.1|SLC35F4|ENSG00000151812.10|solute carrier family 35, member F4
hg19_v2_chr4_+_699537_699600	0.044082	UCACAGU	ENST00000419774.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000362003.5|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000400151.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000427463.1|PCGF3|ENSG00000185619.13|polycomb group ring finger 3 	ENST00000470161.2|PCGF3|ENSG00000185619.13|polycomb group ring finger 3
hg19_v2_chr16_+_85646763_85646822	0.0440426	UCACAGU	ENST00000411612.1|GSE1|ENSG00000131149.13|Gse1 coiled-coil protein 	ENST00000253458.7|GSE1|ENSG00000131149.13|Gse1 coiled-coil protein
hg19_v2_chr6_-_89673280_89673349	0.0439573	UCACAGU	ENST00000369475.3|RNGTT|ENSG00000111880.11|RNA guanylyltransferase and 5'-phosphatase 	ENST00000369485.4|RNGTT|ENSG00000111880.11|RNA guanylyltransferase and 5'-phosphatase 	ENST00000538899.1|RNGTT|ENSG00000111880.11|RNA guanylyltransferase and 5'-phosphatase 	ENST00000265607.6|RNGTT|ENSG00000111880.11|RNA guanylyltransferase and 5'-phosphatase
hg19_v2_chr10_+_104678032_104678094	0.0431981	UCACAGU	ENST00000369878.4|CNNM2|ENSG00000148842.13|cyclin M2 	ENST00000369875.3|CNNM2|ENSG00000148842.13|cyclin M2
hg19_v2_chr19_-_56092187_56092248	0.0425568	UCACAGU	ENST00000325421.4|ZNF579|ENSG00000218891.2|zinc finger protein 579 	ENST00000592239.1|ZNF579|ENSG00000218891.2|zinc finger protein 579
hg19_v2_chr13_-_84456527_84456541	0.0422335	UCACAGU	ENST00000377084.2|SLITRK1|ENSG00000178235.6|SLIT and NTRK-like family, member 1
hg19_v2_chr19_-_16653325_16653358	0.0421478	UCACAGU	ENST00000546361.2|CHERP|ENSG00000085872.10|calcium homeostasis endoplasmic reticulum protein
hg19_v2_chr22_+_21771656_21771693	0.0419986	UCACAGU	ENST00000407464.2|HIC2|ENSG00000169635.5|hypermethylated in cancer 2
hg19_v2_chr13_-_77900814_77900935	0.041694	UCACAGU	ENST00000544440.2|MYCBP2|ENSG00000005810.13|MYC binding protein 2, E3 ubiquitin protein ligase
hg19_v2_chr3_+_107241783_107241850	0.0415496	UCACAGU	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr11_+_118307179_118307228	0.041357	UCACAGU	ENST00000534358.1|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000531904.2|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000389506.5|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000354520.4|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A
hg19_v2_chr12_-_53730147_53730177	0.0413021	UCACAGU	ENST00000536324.2|SP7|ENSG00000170374.4|Sp7 transcription factor
hg19_v2_chr16_-_75498553_75498635	0.0409431	UCACAGU	ENST00000569276.1|TMEM170A|ENSG00000166822.8|transmembrane protein 170A 	ENST00000357613.4|TMEM170A|ENSG00000166822.8|transmembrane protein 170A 	ENST00000561878.1|TMEM170A|ENSG00000166822.8|transmembrane protein 170A 	ENST00000567194.1|RP11-77K12.1|ENSG00000261717.1|Uncharacterized protein  	ENST00000566980.1|TMEM170A|ENSG00000166822.8|transmembrane protein 170A
hg19_v2_chr15_-_102192567_102192597	0.040827	UCACAGU	ENST00000333202.3|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000428002.2|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000559107.1|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000347970.3|TM2D3|ENSG00000184277.8|TM2 domain containing 3
hg19_v2_chr12_-_58240470_58240522	0.0407726	UCACAGU	ENST00000548823.1|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 	ENST00000398073.2|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
hg19_v2_chr4_+_38665810_38665827	0.0406665	UCACAGU	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr2_-_25142708_25142783	0.0405484	UCACAGU	ENST00000260600.5|ADCY3|ENSG00000138031.10|adenylate cyclase 3 	ENST00000435135.1|ADCY3|ENSG00000138031.10|adenylate cyclase 3
hg19_v2_chr20_+_23342783_23342957	0.0401205	UCACAGU	ENST00000544236.1|GZF1|ENSG00000125812.11|GDNF-inducible zinc finger protein 1 	ENST00000338121.5|GZF1|ENSG00000125812.11|GDNF-inducible zinc finger protein 1 	ENST00000542987.1|GZF1|ENSG00000125812.11|GDNF-inducible zinc finger protein 1 	ENST00000424216.1|GZF1|ENSG00000125812.11|GDNF-inducible zinc finger protein 1
hg19_v2_chr12_+_54366894_54366922	0.0399957	UCACAGU	ENST00000546378.1|HOXC11|ENSG00000123388.4|homeobox C11 	ENST00000243082.4|HOXC11|ENSG00000123388.4|homeobox C11
hg19_v2_chr3_+_14989076_14989113	0.0399191	UCACAGU	ENST00000413118.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2 	ENST00000425241.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2
hg19_v2_chr2_-_54087066_54087297	0.039411	UCACAGU	ENST00000394705.2|GPR75|ENSG00000119737.5|G protein-coupled receptor 75 	ENST00000352846.3|GPR75-ASB3|ENSG00000115239.17|GPR75-ASB3 readthrough 	ENST00000406625.2|ASB3|ENSG00000270898.1|Ankyrin repeat and SOCS box protein 3
hg19_v2_chr2_-_232645977_232646009	0.0389821	UCACAGU	ENST00000409772.1|PDE6D|ENSG00000156973.9|phosphodiesterase 6D, cGMP-specific, rod, delta
hg19_v2_chr1_-_149889382_149889434	0.0389422	UCACAGU	ENST00000369145.1|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A 	ENST00000369146.3|SV2A|ENSG00000159164.5|synaptic vesicle glycoprotein 2A
hg19_v2_chr10_+_43572475_43572527	0.0387362	UCACAGU	ENST00000355710.3|RET|ENSG00000165731.13|ret proto-oncogene 	ENST00000498820.1|RET|ENSG00000165731.13|ret proto-oncogene 	ENST00000340058.5|RET|ENSG00000165731.13|ret proto-oncogene
hg19_v2_chr1_-_161147275_161147322	0.03823	UCACAGU	ENST00000319769.5|B4GALT3|ENSG00000158850.10|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3 	ENST00000367998.1|B4GALT3|ENSG00000158850.10|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3
hg19_v2_chr7_-_127032741_127032777	0.0379482	UCACAGU	ENST00000393313.1|ZNF800|ENSG00000048405.5|zinc finger protein 800 	ENST00000265827.3|ZNF800|ENSG00000048405.5|zinc finger protein 800 	ENST00000434602.1|ZNF800|ENSG00000048405.5|zinc finger protein 800
hg19_v2_chr4_+_113970772_113970885	0.0378421	UCACAGU	ENST00000504454.1|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000394537.3|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000357077.4|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000264366.6|ANK2|ENSG00000145362.12|ankyrin 2, neuronal
hg19_v2_chr2_-_206950781_206950947	0.0373898	UCACAGU	ENST00000403263.1|INO80D|ENSG00000114933.11|INO80 complex subunit D
hg19_v2_chr2_+_204801471_204801503	0.0364758	UCACAGU	ENST00000316386.6|ICOS|ENSG00000163600.8|inducible T-cell co-stimulator 	ENST00000435193.1|ICOS|ENSG00000163600.8|inducible T-cell co-stimulator
hg19_v2_chr13_+_50571155_50571229	0.0361408	UCACAGU	ENST00000420995.2|TRIM13|ENSG00000204977.5|tripartite motif containing 13 	ENST00000378182.3|TRIM13|ENSG00000204977.5|tripartite motif containing 13 	ENST00000356017.4|TRIM13|ENSG00000204977.5|tripartite motif containing 13 	ENST00000457662.2|TRIM13|ENSG00000204977.5|tripartite motif containing 13
hg19_v2_chr6_+_13925098_13925163	0.0358	UCACAGU	ENST00000488300.1|RNF182|ENSG00000180537.8|ring finger protein 182 	ENST00000544682.1|RNF182|ENSG00000180537.8|ring finger protein 182 	ENST00000420478.2|RNF182|ENSG00000180537.8|ring finger protein 182
hg19_v2_chrX_-_73834449_73834481	0.0356986	UCACAGU	ENST00000332687.6|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting 	ENST00000349225.2|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting
hg19_v2_chr17_-_58603568_58603610	0.0353072	UCACAGU	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr11_-_18656028_18656040	0.0352016	UCACAGU	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chr5_+_132149017_132149073	0.0344894	UCACAGU	ENST00000378693.2|SOWAHA|ENSG00000198944.4|sosondowah ankyrin repeat domain family member A
hg19_v2_chr4_-_22517620_22517712	0.0344631	UCACAGU	ENST00000502482.1|GPR125|ENSG00000152990.9|G protein-coupled receptor 125 	ENST00000334304.5|GPR125|ENSG00000152990.9|G protein-coupled receptor 125
hg19_v2_chr8_+_28747884_28747938	0.0341199	UCACAGU	ENST00000287701.10|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000444075.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000403668.2|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000519662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000558662.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000523613.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000560599.1|HMBOX1|ENSG00000147421.13|homeobox containing 1 	ENST00000397358.3|HMBOX1|ENSG00000147421.13|homeobox containing 1
hg19_v2_chr17_-_48785216_48785291	0.0339092	UCACAGU	ENST00000285243.6|ANKRD40|ENSG00000154945.6|ankyrin repeat domain 40
hg19_v2_chr3_-_105587879_105587892	0.0338765	UCACAGU	ENST00000264122.4|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000403724.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000405772.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr16_-_30107491_30107569	0.0334304	UCACAGU	ENST00000566134.1|YPEL3|ENSG00000090238.7|yippee-like 3 (Drosophila) 	ENST00000565110.1|YPEL3|ENSG00000090238.7|yippee-like 3 (Drosophila) 	ENST00000398841.1|YPEL3|ENSG00000090238.7|yippee-like 3 (Drosophila) 	ENST00000398838.4|YPEL3|ENSG00000090238.7|yippee-like 3 (Drosophila)
hg19_v2_chr8_-_89339705_89339721	0.0326068	UCACAGU	ENST00000286614.6|MMP16|ENSG00000156103.11|matrix metallopeptidase 16 (membrane-inserted)
hg19_v2_chr1_+_171454659_171454723	0.0324751	UCACAGU	ENST00000367742.3|PRRC2C|ENSG00000117523.11|proline-rich coiled-coil 2C 	ENST00000338920.4|PRRC2C|ENSG00000117523.11|proline-rich coiled-coil 2C
hg19_v2_chr15_-_73925651_73925773	0.0323324	UCACAGU	ENST00000545878.1|NPTN|ENSG00000156642.12|neuroplastin 	ENST00000287226.8|NPTN|ENSG00000156642.12|neuroplastin 	ENST00000345330.4|NPTN|ENSG00000156642.12|neuroplastin
hg19_v2_chr16_-_75467318_75467408	0.0321804	UCACAGU	ENST00000283882.3|CFDP1|ENSG00000153774.4|craniofacial development protein 1
hg19_v2_chr11_-_94964354_94964374	0.0316864	UCACAGU	ENST00000536441.1|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chr15_+_33010175_33010211	0.0307348	UCACAGU	ENST00000300177.4|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist 	ENST00000560677.1|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist 	ENST00000560830.1|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist
hg19_v2_chr17_-_3461092_3461126	0.0301274	UCACAGU	ENST00000301365.4|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3 	ENST00000572519.1|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3
hg19_v2_chr21_-_36260980_36261011	0.0300616	UCACAGU	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr18_-_70535177_70535254	0.029106	UCACAGU	ENST00000327305.6|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1
hg19_v2_chr18_+_32073253_32073339	0.0282787	UCACAGU	ENST00000283365.9|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000596745.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000315456.6|DTNA|ENSG00000134769.17|dystrobrevin, alpha
hg19_v2_chr17_+_29421900_29421951	0.0277235	UCACAGU	ENST00000358273.4|NF1|ENSG00000196712.12|neurofibromin 1 	ENST00000356175.3|NF1|ENSG00000196712.12|neurofibromin 1
hg19_v2_chr13_+_49550015_49550070	0.0276997	UCACAGU	ENST00000492622.2|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chr4_-_16228120_16228164	0.0276211	UCACAGU	ENST00000405303.2|TAPT1|ENSG00000169762.12|transmembrane anterior posterior transformation 1
hg19_v2_chr7_-_75368248_75368265	0.0271488	UCACAGU	ENST00000434438.2|HIP1|ENSG00000127946.12|huntingtin interacting protein 1 	ENST00000336926.6|HIP1|ENSG00000127946.12|huntingtin interacting protein 1
hg19_v2_chr9_+_118916082_118916108	0.0268589	UCACAGU	ENST00000328252.3|PAPPA|ENSG00000182752.8|pregnancy-associated plasma protein A, pappalysin 1
hg19_v2_chr10_+_72575643_72575753	0.0267395	UCACAGU	ENST00000373202.3|SGPL1|ENSG00000166224.12|sphingosine-1-phosphate lyase 1
hg19_v2_chr17_-_49337392_49337465	0.0265562	UCACAGU	ENST00000376381.2|MBTD1|ENSG00000011258.11|mbt domain containing 1 	ENST00000586178.1|MBTD1|ENSG00000011258.11|mbt domain containing 1
hg19_v2_chr10_-_94003003_94003013	0.0262244	UCACAGU	ENST00000412050.4|CPEB3|ENSG00000107864.10|cytoplasmic polyadenylation element binding protein 3
hg19_v2_chr6_+_170102210_170102275	0.0261983	UCACAGU	ENST00000439249.1|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120 	ENST00000332290.2|C6orf120|ENSG00000185127.5|chromosome 6 open reading frame 120
hg19_v2_chr13_+_97874574_97874609	0.0259875	UCACAGU	ENST00000343600.4|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2 	ENST00000345429.6|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2 	ENST00000376673.3|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2
hg19_v2_chr20_+_56964169_56964182	0.0257278	UCACAGU	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr9_-_14314066_14314075	0.0256044	UCACAGU	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chrX_-_54384425_54384495	0.0255808	UCACAGU	ENST00000375169.3|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3 	ENST00000354646.2|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3
hg19_v2_chr1_-_37499726_37499850	0.0253303	UCACAGU	ENST00000373091.3|GRIK3|ENSG00000163873.5|glutamate receptor, ionotropic, kainate 3 	ENST00000373093.4|GRIK3|ENSG00000163873.5|glutamate receptor, ionotropic, kainate 3
hg19_v2_chr12_-_81331697_81331733	0.0251713	UCACAGU	ENST00000552864.1|LIN7A|ENSG00000111052.3|lin-7 homolog A (C. elegans)
hg19_v2_chr6_-_37665751_37665781	0.0249924	UCACAGU	ENST00000297153.7|MDGA1|ENSG00000112139.10|MAM domain containing glycosylphosphatidylinositol anchor 1 	ENST00000434837.3|MDGA1|ENSG00000112139.10|MAM domain containing glycosylphosphatidylinositol anchor 1
hg19_v2_chr1_-_179198702_179198741	0.0249162	UCACAGU	ENST00000502732.1|ABL2|ENSG00000143322.15|c-abl oncogene 2, non-receptor tyrosine kinase
hg19_v2_chr5_-_176981417_176981508	0.0247908	UCACAGU	ENST00000514747.1|FAM193B|ENSG00000146067.11|family with sequence similarity 193, member B 	ENST00000443375.2|FAM193B|ENSG00000146067.11|family with sequence similarity 193, member B 	ENST00000329540.5|FAM193B|ENSG00000146067.11|family with sequence similarity 193, member B
hg19_v2_chr17_+_27717415_27717618	0.0246911	UCACAGU	ENST00000583121.1|TAOK1|ENSG00000160551.5|TAO kinase 1 	ENST00000261716.3|TAOK1|ENSG00000160551.5|TAO kinase 1
hg19_v2_chr1_-_184723942_184724047	0.0241907	UCACAGU	ENST00000318130.8|EDEM3|ENSG00000116406.14|ER degradation enhancer, mannosidase alpha-like 3
hg19_v2_chr3_+_53195136_53195240	0.0239065	UCACAGU	ENST00000394729.2|PRKCD|ENSG00000163932.9|protein kinase C, delta 	ENST00000330452.3|PRKCD|ENSG00000163932.9|protein kinase C, delta
hg19_v2_chr5_+_76326187_76326300	0.0236037	UCACAGU	ENST00000312916.7|AGGF1|ENSG00000164252.8|angiogenic factor with G patch and FHA domains 1 	ENST00000506806.1|AGGF1|ENSG00000164252.8|angiogenic factor with G patch and FHA domains 1
hg19_v2_chr20_-_43438912_43439165	0.0230154	UCACAGU	ENST00000541604.2|RIMS4|ENSG00000101098.8|regulating synaptic membrane exocytosis 4 	ENST00000372851.3|RIMS4|ENSG00000101098.8|regulating synaptic membrane exocytosis 4
hg19_v2_chr1_-_23886285_23886336	0.0227596	UCACAGU	ENST00000374561.5|ID3|ENSG00000117318.8|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein
hg19_v2_chr16_-_22385901_22385947	0.0225836	UCACAGU	ENST00000268383.2|CDR2|ENSG00000140743.3|cerebellar degeneration-related protein 2, 62kDa
hg19_v2_chrX_-_77041685_77041716	0.022146	UCACAGU	ENST00000373344.5|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked 	ENST00000395603.3|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked
hg19_v2_chr17_-_36831156_36831187	0.0220788	UCACAGU	ENST00000325814.5|C17orf96|ENSG00000179294.5|chromosome 17 open reading frame 96
hg19_v2_chr13_-_76056250_76056280	0.0220397	UCACAGU	ENST00000377636.3|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000431480.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000377625.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000425511.1|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4
hg19_v2_chr1_-_116383738_116383752	0.0219865	UCACAGU	ENST00000320238.3|NHLH2|ENSG00000177551.5|nescient helix loop helix 2
hg19_v2_chr12_-_104350898_104351051	0.0218161	UCACAGU	ENST00000552940.1|C12orf73|ENSG00000204954.5|chromosome 12 open reading frame 73 	ENST00000547975.1|C12orf73|ENSG00000204954.5|chromosome 12 open reading frame 73 	ENST00000549478.1|C12orf73|ENSG00000204954.5|chromosome 12 open reading frame 73 	ENST00000546540.1|C12orf73|ENSG00000204954.5|chromosome 12 open reading frame 73 	ENST00000546819.1|C12orf73|ENSG00000204954.5|chromosome 12 open reading frame 73 	ENST00000378090.4|C12orf73|ENSG00000204954.5|chromosome 12 open reading frame 73 	ENST00000547945.1|C12orf73|ENSG00000204954.5|chromosome 12 open reading frame 73
hg19_v2_chr15_+_101142722_101142816	0.0218088	UCACAGU	ENST00000332783.7|ASB7|ENSG00000183475.8|ankyrin repeat and SOCS box containing 7 	ENST00000558747.1|ASB7|ENSG00000183475.8|ankyrin repeat and SOCS box containing 7 	ENST00000343276.4|ASB7|ENSG00000183475.8|ankyrin repeat and SOCS box containing 7
hg19_v2_chr19_+_45251804_45251840	0.0217525	UCACAGU	ENST00000164227.5|BCL3|ENSG00000069399.8|B-cell CLL/lymphoma 3
hg19_v2_chr9_-_136857403_136857461	0.0212538	UCACAGU	ENST00000406606.3|VAV2|ENSG00000160293.12|vav 2 guanine nucleotide exchange factor 	ENST00000371850.3|VAV2|ENSG00000160293.12|vav 2 guanine nucleotide exchange factor
hg19_v2_chr5_+_138678131_138678169	0.0212357	UCACAGU	ENST00000394795.2|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2 	ENST00000510080.1|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2
hg19_v2_chr12_+_72056773_72056796	0.0209255	UCACAGU	ENST00000308086.2|THAP2|ENSG00000173451.2|THAP domain containing, apoptosis associated protein 2
hg19_v2_chr2_+_169312350_169312372	0.0208808	UCACAGU	ENST00000305747.6|CERS6|ENSG00000172292.10|ceramide synthase 6
hg19_v2_chr6_+_34759837_34759964	0.019893	UCACAGU	ENST00000192788.5|UHRF1BP1|ENSG00000065060.12|UHRF1 binding protein 1 	ENST00000452449.2|UHRF1BP1|ENSG00000065060.12|UHRF1 binding protein 1
hg19_v2_chr3_-_24536253_24536328	0.0195799	UCACAGU	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr2_-_64881018_64881064	0.0191127	UCACAGU	ENST00000313349.3|SERTAD2|ENSG00000179833.4|SERTA domain containing 2
hg19_v2_chr6_-_99873145_99873207	0.0186657	UCACAGU	ENST00000369239.5|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein 	ENST00000438806.1|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein
hg19_v2_chr15_+_54305101_54305101	0.0182351	UCACAGU	ENST00000260323.11|UNC13C|ENSG00000137766.12|unc-13 homolog C (C. elegans) 	ENST00000545554.1|UNC13C|ENSG00000137766.12|unc-13 homolog C (C. elegans) 	ENST00000537900.1|UNC13C|ENSG00000137766.12|unc-13 homolog C (C. elegans)
hg19_v2_chr12_-_25403737_25403881	0.0178369	UCACAGU	ENST00000256078.4|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000556131.1|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000311936.3|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000557334.1|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog
hg19_v2_chr10_+_98592009_98592061	0.0178107	UCACAGU	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr19_-_49576198_49576198	0.0175819	UCACAGU	ENST00000221444.1|KCNA7|ENSG00000104848.1|potassium voltage-gated channel, shaker-related subfamily, member 7
hg19_v2_chr13_-_107187462_107187462	0.0170065	UCACAGU	ENST00000245323.4|EFNB2|ENSG00000125266.6|ephrin-B2
hg19_v2_chr14_-_27066636_27066701	0.0165587	UCACAGU	ENST00000267422.7|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000344429.5|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000574031.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000465357.2|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000547619.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1
hg19_v2_chr17_-_73179046_73179078	0.0163184	UCACAGU	ENST00000314523.7|SUMO2|ENSG00000188612.7|small ubiquitin-like modifier 2 	ENST00000420826.2|SUMO2|ENSG00000188612.7|small ubiquitin-like modifier 2
hg19_v2_chr4_+_148402069_148402099	0.0159156	UCACAGU	ENST00000358556.4|EDNRA|ENSG00000151617.11|endothelin receptor type A 	ENST00000339690.5|EDNRA|ENSG00000151617.11|endothelin receptor type A 	ENST00000511804.1|EDNRA|ENSG00000151617.11|endothelin receptor type A 	ENST00000324300.5|EDNRA|ENSG00000151617.11|endothelin receptor type A
hg19_v2_chr13_-_111214015_111214080	0.0157488	UCACAGU	ENST00000267328.3|RAB20|ENSG00000139832.3|RAB20, member RAS oncogene family
hg19_v2_chr10_+_11206925_11206993	0.0156701	UCACAGU	ENST00000354440.2|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000315874.4|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000427450.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr9_-_38069208_38069267	0.0156604	UCACAGU	ENST00000377707.3|SHB|ENSG00000107338.8|Src homology 2 domain containing adaptor protein B 	ENST00000377700.4|SHB|ENSG00000107338.8|Src homology 2 domain containing adaptor protein B
hg19_v2_chr1_+_16693578_16693760	0.0155945	UCACAGU	ENST00000401088.4|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000471507.1|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000401089.3|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000375590.3|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1 	ENST00000492354.1|SZRD1|ENSG00000055070.12|SUZ RNA binding domain containing 1
hg19_v2_chr2_-_227664474_227664508	0.0155341	UCACAGU	ENST00000305123.5|IRS1|ENSG00000169047.5|insulin receptor substrate 1
hg19_v2_chr6_-_33160231_33160276	0.0151079	UCACAGU	ENST00000395194.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000457788.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000341947.2|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000357486.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000374714.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000374713.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000395197.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000374712.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000361917.1|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2 	ENST00000374708.4|COL11A2|ENSG00000204248.6|collagen, type XI, alpha 2
hg19_v2_chr12_+_99038998_99039078	0.0150756	UCACAGU	ENST00000359972.2|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000357310.1|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000339433.3|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000333991.1|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1
hg19_v2_chr15_-_34502278_34502318	0.014389	UCACAGU	ENST00000559515.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000256544.3|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000560108.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000559462.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1
hg19_v2_chr9_+_34958254_34958321	0.0141975	UCACAGU	ENST00000242315.3|KIAA1045|ENSG00000122733.11|KIAA1045
hg19_v2_chr12_-_49110613_49110681	0.0138558	UCACAGU	ENST00000261900.3|CCNT1|ENSG00000129315.5|cyclin T1
hg19_v2_chr3_+_193310918_193310934	0.0137131	UCACAGU	ENST00000361908.3|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000392438.3|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000361510.2|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000361715.2|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000361828.2|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant) 	ENST00000361150.2|OPA1|ENSG00000198836.4|optic atrophy 1 (autosomal dominant)
hg19_v2_chr1_-_95392635_95392834	0.0130387	UCACAGU	ENST00000538964.1|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000394202.4|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000370206.4|CNN3|ENSG00000117519.11|calponin 3, acidic
hg19_v2_chr12_-_117175819_117175887	0.0126857	UCACAGU	ENST00000261318.3|C12orf49|ENSG00000111412.4|chromosome 12 open reading frame 49 	ENST00000536380.1|C12orf49|ENSG00000111412.4|chromosome 12 open reading frame 49
hg19_v2_chr6_+_10556215_10556240	0.0125799	UCACAGU	ENST00000316170.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr19_+_19496624_19496660	0.0122118	UCACAGU	ENST00000494516.2|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A 	ENST00000360315.3|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A 	ENST00000252577.5|GATAD2A|ENSG00000167491.13|GATA zinc finger domain containing 2A
hg19_v2_chr15_+_75575176_75575176	0.012125	UCACAGU	ENST00000434739.3|GOLGA6D|ENSG00000140478.10|golgin A6 family, member D
hg19_v2_chr8_-_68255912_68255952	0.0121082	UCACAGU	ENST00000262215.3|ARFGEF1|ENSG00000066777.4|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) 	ENST00000519436.1|ARFGEF1|ENSG00000066777.4|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)
hg19_v2_chr2_-_109605663_109605828	0.0120692	UCACAGU	ENST00000409271.1|EDAR|ENSG00000135960.5|ectodysplasin A receptor 	ENST00000258443.2|EDAR|ENSG00000135960.5|ectodysplasin A receptor 	ENST00000376651.1|EDAR|ENSG00000135960.5|ectodysplasin A receptor
hg19_v2_chr8_-_17104356_17104395	0.0119808	UCACAGU	ENST00000361272.4|CNOT7|ENSG00000198791.7|CCR4-NOT transcription complex, subunit 7 	ENST00000523917.1|CNOT7|ENSG00000198791.7|CCR4-NOT transcription complex, subunit 7
hg19_v2_chr14_+_73603126_73603255	0.0118642	UCACAGU	ENST00000557356.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556864.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556533.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556951.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000557293.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000553719.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000553599.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000556011.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000394157.3|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000357710.4|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000324501.5|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000560005.2|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000555254.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000261970.3|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000344094.3|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000554131.1|PSEN1|ENSG00000080815.14|presenilin 1 	ENST00000557037.1|PSEN1|ENSG00000080815.14|presenilin 1
hg19_v2_chr17_-_56595196_56595266	0.0112835	UCACAGU	ENST00000579921.1|MTMR4|ENSG00000108389.5|myotubularin related protein 4 	ENST00000579925.1|MTMR4|ENSG00000108389.5|myotubularin related protein 4 	ENST00000323456.5|MTMR4|ENSG00000108389.5|myotubularin related protein 4
hg19_v2_chr13_+_42622781_42622889	0.0103765	UCACAGU	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr19_-_344786_344826	0.00955233	UCACAGU	ENST00000264819.4|MIER2|ENSG00000105556.6|mesoderm induction early response 1, family member 2
hg19_v2_chr5_-_82373260_82373315	0.00901316	UCACAGU	ENST00000502346.1|TMEM167A|ENSG00000174695.5|transmembrane protein 167A
hg19_v2_chr3_+_141205852_141205929	0.00873297	UCACAGU	ENST00000286364.3|RASA2|ENSG00000155903.7|RAS p21 protein activator 2 	ENST00000452898.1|RASA2|ENSG00000155903.7|RAS p21 protein activator 2
hg19_v2_chr2_+_206547215_206547232	0.00715035	UCACAGU	ENST00000360409.3|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000540178.1|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000540841.1|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000355117.4|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000450507.1|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000417189.1|NRP2|ENSG00000118257.12|neuropilin 2
hg19_v2_chr4_-_140477928_140477990	0.0069786	UCACAGU	ENST00000274031.3|SETD7|ENSG00000145391.9|SET domain containing (lysine methyltransferase) 7
hg19_v2_chr1_-_206945830_206945845	0.00696396	UCACAGU	ENST00000423557.1|IL10|ENSG00000136634.5|interleukin 10
hg19_v2_chr2_-_176032843_176032941	0.00685655	UCACAGU	ENST00000392544.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000409499.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000426833.3|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000392543.2|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000538946.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000487334.2|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000409833.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000409635.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000264110.2|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000345739.5|ATF2|ENSG00000115966.12|activating transcription factor 2
hg19_v2_chr5_+_143584814_143584840	0.00664326	UCACAGU	ENST00000507359.3|KCTD16|ENSG00000183775.6|potassium channel tetramerization domain containing 16
hg19_v2_chr16_-_70472946_70473024	0.00662584	UCACAGU	ENST00000342907.2|ST3GAL2|ENSG00000157350.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 2
hg19_v2_chr5_+_52285144_52285166	0.00649531	UCACAGU	ENST00000296585.5|ITGA2|ENSG00000164171.6|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)
hg19_v2_chr8_-_41655107_41655159	0.00639867	UCACAGU	ENST00000347528.4|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000289734.7|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000379758.2|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000396945.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000396942.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000352337.4|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic
hg19_v2_chr11_+_109292846_109292875	0.00632815	UCACAGU	ENST00000327419.6|C11orf87|ENSG00000185742.6|chromosome 11 open reading frame 87
hg19_v2_chr1_+_32573636_32573673	0.00602488	UCACAGU	ENST00000373625.3|KPNA6|ENSG00000025800.9|karyopherin alpha 6 (importin alpha 7)
hg19_v2_chr15_-_43398274_43398318	0.00535883	UCACAGU	ENST00000382177.2|UBR1|ENSG00000159459.7|ubiquitin protein ligase E3 component n-recognin 1 	ENST00000290650.4|UBR1|ENSG00000159459.7|ubiquitin protein ligase E3 component n-recognin 1
hg19_v2_chr2_+_148602058_148602185	0.00510801	UCACAGU	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr12_+_50135588_50135605	0.00508665	UCACAGU	ENST00000423828.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6 	ENST00000550445.1|TMBIM6|ENSG00000139644.8|transmembrane BAX inhibitor motif containing 6
hg19_v2_chr11_+_68228186_68228281	0.00495147	UCACAGU	ENST00000393799.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393800.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000528635.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000533127.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529907.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529344.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000534534.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524845.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265637.4|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524904.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393801.3|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265636.5|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529710.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3
hg19_v2_chr4_+_134070439_134070470	0.0041637	UCACAGU	ENST00000264360.5|PCDH10|ENSG00000138650.7|protocadherin 10
hg19_v2_chr12_+_862089_862343	0.0033577	UCACAGU	ENST00000315939.6|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000537687.1|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000447667.2|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1
hg19_v2_chr12_+_120875910_120876001	0.00267416	UCACAGU	ENST00000551806.1|AL021546.6|ENSG00000111780.8|Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial
hg19_v2_chr1_+_2985760_2985775	0.0018901	UCACAGU	ENST00000378391.2|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000514189.1|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000270722.5|PRDM16|ENSG00000142611.12|PR domain containing 16
hg19_v2_chr13_-_103053946_103054124	0.00185952	UCACAGU	ENST00000376131.4|FGF14|ENSG00000102466.11|fibroblast growth factor 14
hg19_v2_chr5_+_112196919_112197036	0.00182451	UCACAGU	ENST00000505459.1|SRP19|ENSG00000153037.8|signal recognition particle 19kDa 	ENST00000282999.3|SRP19|ENSG00000153037.8|signal recognition particle 19kDa 	ENST00000515463.1|SRP19|ENSG00000153037.8|signal recognition particle 19kDa
hg19_v2_chr5_-_89825328_89825422	0.0017445	UCACAGU	ENST00000500869.2|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000315948.6|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000509384.1|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3
hg19_v2_chr6_+_118228657_118228715	0.00133093	UCACAGU	ENST00000360388.4|SLC35F1|ENSG00000196376.6|solute carrier family 35, member F1
hg19_v2_chr3_-_56502375_56502428	0.00113607	UCACAGU	ENST00000288221.6|ERC2|ENSG00000187672.8|ELKS/RAB6-interacting/CAST family member 2
hg19_v2_chr16_-_1464688_1464752	0.00102294	UCACAGU	ENST00000389221.4|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000508903.2|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000397462.1|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000301712.5|UNKL|ENSG00000059145.14|unkempt family zinc finger-like
hg19_v2_chr21_-_39870339_39870443	0.000957538	UCACAGU	ENST00000429727.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398905.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398907.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000453032.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000288319.7|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog
hg19_v2_chr12_-_120907459_120907596	0.000520394	UCACAGU	ENST00000229390.3|SRSF9|ENSG00000111786.4|serine/arginine-rich splicing factor 9
hg19_v2_chr15_+_59279851_59279880	0.000375124	UCACAGU	ENST00000348370.4|RNF111|ENSG00000157450.11|ring finger protein 111 	ENST00000434298.1|RNF111|ENSG00000157450.11|ring finger protein 111 	ENST00000559160.1|RNF111|ENSG00000157450.11|ring finger protein 111
