hg19_v2_chr13_-_39564993_39565002	2.4575	SRY	ENST00000423210.1|STOML3|ENSG00000133115.7|stomatin (EPB72)-like 3
hg19_v2_chr6_-_32557610_32557630	2.20558	SRY	ENST00000360004.5|HLA-DRB1|ENSG00000196126.6|major histocompatibility complex, class II, DR beta 1
hg19_v2_chr4_+_165675197_165675216	1.87367	SRY	ENST00000515485.1|RP11-294O2.2|ENSG00000248771.1|RP11-294O2.2
hg19_v2_chr20_-_3762087_3762100	1.7723	SRY	ENST00000379756.3|SPEF1|ENSG00000101222.8|sperm flagellar 1
hg19_v2_chr17_+_17876127_17876276	1.51767	SRY	ENST00000582416.1|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48 	ENST00000313838.8|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48 	ENST00000411504.2|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48 	ENST00000581264.1|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48 	ENST00000399187.1|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48 	ENST00000479684.2|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48 	ENST00000584166.1|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48 	ENST00000585108.1|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48 	ENST00000399182.1|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48 	ENST00000579977.1|LRRC48|ENSG00000171962.13|leucine rich repeat containing 48
hg19_v2_chr6_+_163148973_163149044	1.48436	SRY	ENST00000366888.2|PACRG|ENSG00000112530.7|PARK2 co-regulated
hg19_v2_chr4_+_165675269_165675289	1.34053	SRY	ENST00000507311.1|RP11-294O2.2|ENSG00000248771.1|RP11-294O2.2
hg19_v2_chr14_-_92413727_92413743	1.33928	SRY	ENST00000267620.10|FBLN5|ENSG00000140092.10|fibulin 5
hg19_v2_chr1_+_61547405_61547534	1.26756	SRY	ENST00000371189.4|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr19_+_13134772_13134846	1.09295	SRY	ENST00000587760.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000585575.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v2_chr1_-_217311090_217311097	0.969656	SRY	ENST00000493603.1|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma 	ENST00000366940.2|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr14_-_92413353_92413418	0.868609	SRY	ENST00000556154.1|FBLN5|ENSG00000140092.10|fibulin 5
hg19_v2_chr20_-_21494654_21494678	0.868211	SRY	ENST00000377142.4|NKX2-2|ENSG00000125820.5|NK2 homeobox 2
hg19_v2_chr14_-_89883412_89883478	0.85796	SRY	ENST00000557258.1|FOXN3|ENSG00000053254.11|forkhead box N3
hg19_v2_chr14_-_92414055_92414167	0.850475	SRY	ENST00000342058.4|FBLN5|ENSG00000140092.10|fibulin 5
hg19_v2_chr1_-_40367668_40367687	0.814622	SRY	ENST00000397332.2|MYCL|ENSG00000116990.9|v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog 	ENST00000429311.1|MYCL|ENSG00000116990.9|v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
hg19_v2_chr14_-_23288930_23289020	0.809281	SRY	ENST00000554517.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000285850.7|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000397529.2|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7 	ENST00000555702.1|SLC7A7|ENSG00000155465.14|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7
hg19_v2_chr5_-_111091948_111091994	0.806656	SRY	ENST00000447165.2|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr4_-_105416039_105416065	0.787367	SRY	ENST00000394767.2|CXXC4|ENSG00000168772.9|CXXC finger protein 4
hg19_v2_chr2_-_157198860_157198978	0.775709	SRY	ENST00000409572.1|NR4A2|ENSG00000153234.9|nuclear receptor subfamily 4, group A, member 2
hg19_v2_chr8_-_72274095_72274116	0.745493	SRY	ENST00000303824.7|EYA1|ENSG00000104313.13|eyes absent homolog 1 (Drosophila)
hg19_v2_chr1_+_33722080_33722174	0.732349	SRY	ENST00000483388.1|ZNF362|ENSG00000160094.10|zinc finger protein 362 	ENST00000539719.1|ZNF362|ENSG00000160094.10|zinc finger protein 362
hg19_v2_chr5_+_140248518_140248689	0.713381	SRY	ENST00000398640.2|PCDHA11|ENSG00000249158.2|protocadherin alpha 11
hg19_v2_chr6_-_152489484_152489499	0.712931	SRY	ENST00000354674.4|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1 	ENST00000539504.1|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1
hg19_v2_chr17_-_56406117_56406165	0.705804	SRY	ENST00000268893.6|BZRAP1|ENSG00000005379.11|benzodiazepine receptor (peripheral) associated protein 1 	ENST00000355701.3|BZRAP1|ENSG00000005379.11|benzodiazepine receptor (peripheral) associated protein 1
hg19_v2_chr10_-_62332357_62332428	0.677306	SRY	ENST00000503366.1|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr6_+_126070726_126070768	0.674988	SRY	ENST00000368364.3|HEY2|ENSG00000135547.4|hes-related family bHLH transcription factor with YRPW motif 2
hg19_v2_chr1_-_160231451_160231592	0.663218	SRY	ENST00000495887.1|DCAF8|ENSG00000132716.14|DDB1 and CUL4 associated factor 8
hg19_v2_chr4_+_41614909_41614926	0.64898	SRY	ENST00000509454.1|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1 	ENST00000396595.3|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1 	ENST00000381753.4|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1
hg19_v2_chr1_-_217250231_217250349	0.632859	SRY	ENST00000493748.1|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma 	ENST00000463665.1|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr22_-_31741757_31741770	0.609754	SRY	ENST00000215919.3|PATZ1|ENSG00000100105.13|POZ (BTB) and AT hook containing zinc finger 1
hg19_v2_chr14_+_91581011_91581044	0.582997	SRY	ENST00000523894.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000522322.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000523771.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr10_-_61900762_61900779	0.575546	SRY	ENST00000355288.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr14_-_53019211_53019269	0.571256	SRY	ENST00000557374.1|TXNDC16|ENSG00000087301.4|thioredoxin domain containing 16 	ENST00000281741.4|TXNDC16|ENSG00000087301.4|thioredoxin domain containing 16
hg19_v2_chr13_+_113633620_113633695	0.563662	SRY	ENST00000421756.1|MCF2L|ENSG00000126217.16|MCF.2 cell line derived transforming sequence-like 	ENST00000375601.3|MCF2L|ENSG00000126217.16|MCF.2 cell line derived transforming sequence-like
hg19_v2_chr3_+_39509163_39509180	0.553527	SRY	ENST00000436143.2|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000441980.2|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000311042.6|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein
hg19_v2_chr14_+_91580708_91580730	0.543839	SRY	ENST00000518868.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr14_+_91580777_91580793	0.538673	SRY	ENST00000525393.2|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000428926.2|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000517362.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr19_+_13135731_13135787	0.53684	SRY	ENST00000587260.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v2_chr10_-_62149433_62149488	0.528461	SRY	ENST00000280772.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr16_-_68482440_68482591	0.525426	SRY	ENST00000219334.5|SMPD3|ENSG00000103056.7|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
hg19_v2_chr6_-_87804815_87804830	0.515611	SRY	ENST00000369582.2|CGA|ENSG00000135346.4|glycoprotein hormones, alpha polypeptide
hg19_v2_chr3_-_11610255_11610398	0.51384	SRY	ENST00000424529.2|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila)
hg19_v2_chr1_-_57045228_57045242	0.512063	SRY	ENST00000371250.3|PPAP2B|ENSG00000162407.8|phosphatidic acid phosphatase type 2B
hg19_v2_chr21_+_33784670_33784696	0.50378	SRY	ENST00000300255.2|EVA1C|ENSG00000166979.8|eva-1 homolog C (C. elegans)
hg19_v2_chr2_+_191273052_191273121	0.503573	SRY	ENST00000417958.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000432036.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000392328.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6
hg19_v2_chr18_-_52989217_52989233	0.498857	SRY	ENST00000570287.2|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr14_+_53019993_53020137	0.493658	SRY	ENST00000542169.2|GPR137C|ENSG00000180998.7|G protein-coupled receptor 137C 	ENST00000555622.1|GPR137C|ENSG00000180998.7|G protein-coupled receptor 137C
hg19_v2_chr6_-_31651817_31651817	0.491314	SRY	ENST00000375863.3|LY6G5C|ENSG00000204428.8|lymphocyte antigen 6 complex, locus G5C 	ENST00000375860.2|LY6G5C|ENSG00000204428.8|lymphocyte antigen 6 complex, locus G5C
hg19_v2_chr17_+_8924837_8924872	0.490126	SRY	ENST00000173229.2|NTN1|ENSG00000065320.4|netrin 1
hg19_v2_chr10_+_99079008_99079060	0.488552	SRY	ENST00000371021.3|FRAT1|ENSG00000165879.7|frequently rearranged in advanced T-cell lymphomas
hg19_v2_chr10_-_99094458_99094500	0.485132	SRY	ENST00000371019.2|FRAT2|ENSG00000181274.5|frequently rearranged in advanced T-cell lymphomas 2
hg19_v2_chr7_+_114055052_114055378	0.481832	SRY	ENST00000462331.1|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000408937.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000403559.4|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000350908.4|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393498.2|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393495.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000378237.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393489.3|FOXP2|ENSG00000128573.18|forkhead box P2
hg19_v2_chr3_+_39509070_39509101	0.479055	SRY	ENST00000354668.4|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000428261.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000420739.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000415443.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000447324.1|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein 	ENST00000383754.3|MOBP|ENSG00000168314.13|myelin-associated oligodendrocyte basic protein
hg19_v2_chr18_-_53303123_53303190	0.478553	SRY	ENST00000569357.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000565124.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000398339.1|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chrX_+_15525426_15525441	0.471278	SRY	ENST00000342014.6|BMX|ENSG00000102010.10|BMX non-receptor tyrosine kinase
hg19_v2_chr18_-_52989525_52989623	0.46911	SRY	ENST00000457482.3|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr9_+_27109392_27109435	0.460094	SRY	ENST00000406359.4|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chr18_-_53257027_53257052	0.444219	SRY	ENST00000568740.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000564403.2|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000537578.1|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr9_-_124989804_124989865	0.441642	SRY	ENST00000373755.2|LHX6|ENSG00000106852.11|LIM homeobox 6 	ENST00000373754.2|LHX6|ENSG00000106852.11|LIM homeobox 6
hg19_v2_chr3_-_141868357_141868393	0.439734	SRY	ENST00000489671.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000475734.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000467072.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000499676.2|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr14_-_61124977_61125037	0.435506	SRY	ENST00000554986.1|SIX1|ENSG00000126778.7|SIX homeobox 1
hg19_v2_chr20_+_11008408_11008408	0.429219	SRY	ENST00000378252.1|C20orf187|ENSG00000125899.6|chromosome 20 open reading frame 187
hg19_v2_chr6_-_9939552_9939552	0.417172	SRY	ENST00000460363.2|OFCC1|ENSG00000181355.16|orofacial cleft 1 candidate 1
hg19_v2_chr3_+_69812701_69812729	0.413769	SRY	ENST00000472437.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chrX_-_24690771_24690794	0.408611	SRY	ENST00000379145.1|PCYT1B|ENSG00000102230.9|phosphate cytidylyltransferase 1, choline, beta
hg19_v2_chr2_-_118943930_118943963	0.408133	SRY	ENST00000449075.1|AC093901.1|ENSG00000226856.1|AC093901.1	ENST00000414886.1|AC093901.1|ENSG00000226856.1|AC093901.1	ENST00000449819.1|AC093901.1|ENSG00000226856.1|AC093901.1
hg19_v2_chr13_-_41240717_41240735	0.408002	SRY	ENST00000379561.5|FOXO1|ENSG00000150907.6|forkhead box O1
hg19_v2_chr1_-_177133818_177133872	0.404288	SRY	ENST00000424564.2|ASTN1|ENSG00000152092.11|astrotactin 1 	ENST00000361833.2|ASTN1|ENSG00000152092.11|astrotactin 1
hg19_v2_chr17_-_39324424_39324474	0.401362	SRY	ENST00000391356.2|KRTAP4-3|ENSG00000196156.3|keratin associated protein 4-3
hg19_v2_chr1_-_177134024_177134052	0.400763	SRY	ENST00000367654.3|ASTN1|ENSG00000152092.11|astrotactin 1
hg19_v2_chr16_+_2588012_2588165	0.393671	SRY	ENST00000354836.5|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1 	ENST00000389224.3|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1
hg19_v2_chr1_-_40367530_40367597	0.390411	SRY	ENST00000372816.2|MYCL|ENSG00000116990.9|v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog 	ENST00000372815.1|MYCL|ENSG00000116990.9|v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
hg19_v2_chr8_+_24151553_24151590	0.37929	SRY	ENST00000265769.4|ADAM28|ENSG00000042980.8|ADAM metallopeptidase domain 28 	ENST00000540823.1|ADAM28|ENSG00000042980.8|ADAM metallopeptidase domain 28 	ENST00000397649.3|ADAM28|ENSG00000042980.8|ADAM metallopeptidase domain 28
hg19_v2_chr5_-_146435501_146435537	0.379089	SRY	ENST00000336640.6|PPP2R2B|ENSG00000156475.14|protein phosphatase 2, regulatory subunit B, beta
hg19_v2_chr10_-_13570533_13570533	0.37454	SRY	ENST00000396900.2|BEND7|ENSG00000165626.12|BEN domain containing 7 	ENST00000396898.2|BEND7|ENSG00000165626.12|BEN domain containing 7
hg19_v2_chr3_+_112930306_112930338	0.373339	SRY	ENST00000495514.1|BOC|ENSG00000144857.10|BOC cell adhesion associated, oncogene regulated
hg19_v2_chr7_+_30185406_30185417	0.373011	SRY	ENST00000324489.5|C7orf41|ENSG00000180354.11|maturin, neural progenitor differentiation regulator homolog (Xenopus)
hg19_v2_chr2_-_71454185_71454242	0.371153	SRY	ENST00000244221.8|PAIP2B|ENSG00000124374.8|poly(A) binding protein interacting protein 2B
hg19_v2_chr5_-_146435572_146435590	0.370855	SRY	ENST00000394414.1|PPP2R2B|ENSG00000156475.14|protein phosphatase 2, regulatory subunit B, beta
hg19_v2_chr13_-_99910673_99910682	0.367569	SRY	ENST00000397473.2|GPR18|ENSG00000125245.8|G protein-coupled receptor 18 	ENST00000397470.2|GPR18|ENSG00000125245.8|G protein-coupled receptor 18
hg19_v2_chr2_+_86668464_86668584	0.366639	SRY	ENST00000409064.1|KDM3A|ENSG00000115548.12|lysine (K)-specific demethylase 3A
hg19_v2_chr8_+_110346546_110346619	0.354729	SRY	ENST00000521662.1|ENY2|ENSG00000120533.8|enhancer of yellow 2 homolog (Drosophila) 	ENST00000521688.1|ENY2|ENSG00000120533.8|enhancer of yellow 2 homolog (Drosophila) 	ENST00000520147.1|ENY2|ENSG00000120533.8|enhancer of yellow 2 homolog (Drosophila)
hg19_v2_chr17_+_79953310_79953319	0.354573	SRY	ENST00000582355.2|ASPSCR1|ENSG00000169696.11|alveolar soft part sarcoma chromosome region, candidate 1
hg19_v2_chr14_+_91580732_91580746	0.342758	SRY	ENST00000519019.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000523816.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000517518.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr20_+_10415931_10416011	0.342682	SRY	ENST00000334534.5|SLX4IP|ENSG00000149346.10|SLX4 interacting protein
hg19_v2_chr16_+_2587998_2588011	0.340461	SRY	ENST00000441549.3|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1 	ENST00000268673.7|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1
hg19_v2_chr1_-_85930246_85930289	0.338668	SRY	ENST00000426972.3|DDAH1|ENSG00000153904.14|dimethylarginine dimethylaminohydrolase 1
hg19_v2_chr11_-_85397167_85397320	0.338552	SRY	ENST00000316398.3|CCDC89|ENSG00000179071.3|coiled-coil domain containing 89
hg19_v2_chr17_+_76311791_76311810	0.336056	SRY	ENST00000586321.1|AC061992.2|ENSG00000267737.1|AC061992.2
hg19_v2_chr12_-_10251576_10251599	0.333563	SRY	ENST00000315330.4|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr19_+_13906250_13906274	0.329666	SRY	ENST00000254323.2|ZSWIM4|ENSG00000132003.5|zinc finger, SWIM-type containing 4
hg19_v2_chr19_+_13135790_13135811	0.329416	SRY	ENST00000358552.3|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v2_chr18_-_52969844_52969895	0.328927	SRY	ENST00000561831.3|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr5_-_76935513_76935513	0.3264	SRY	ENST00000306422.3|OTP|ENSG00000171540.6|orthopedia homeobox
hg19_v2_chr5_-_146435694_146435705	0.315641	SRY	ENST00000356826.3|PPP2R2B|ENSG00000156475.14|protein phosphatase 2, regulatory subunit B, beta
hg19_v2_chr6_+_122720681_122720713	0.310361	SRY	ENST00000368455.4|HSF2|ENSG00000025156.8|heat shock transcription factor 2 	ENST00000452194.1|HSF2|ENSG00000025156.8|heat shock transcription factor 2
hg19_v2_chr17_+_36861735_36861795	0.309952	SRY	ENST00000378137.5|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 	ENST00000325718.7|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg19_v2_chr7_-_19813192_19813256	0.308536	SRY	ENST00000422233.1|TMEM196|ENSG00000173452.9|transmembrane protein 196 	ENST00000433641.1|TMEM196|ENSG00000173452.9|transmembrane protein 196
hg19_v2_chr3_-_58652523_58652575	0.305649	SRY	ENST00000489857.1|FAM3D|ENSG00000198643.2|family with sequence similarity 3, member D 	ENST00000358781.2|FAM3D|ENSG00000198643.2|family with sequence similarity 3, member D
hg19_v2_chr1_+_40840320_40840413	0.301291	SRY	ENST00000372708.1|SMAP2|ENSG00000084070.7|small ArfGAP2
hg19_v2_chr6_+_72596604_72596727	0.296202	SRY	ENST00000348717.5|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000517960.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000518273.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000522291.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000521978.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000520567.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000264839.7|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr18_+_72922710_72922733	0.293762	SRY	ENST00000322038.5|TSHZ1|ENSG00000179981.9|teashirt zinc finger homeobox 1
hg19_v2_chr1_+_164528866_164528877	0.289919	SRY	ENST00000420696.2|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr14_+_53019822_53019873	0.287958	SRY	ENST00000321662.6|GPR137C|ENSG00000180998.7|G protein-coupled receptor 137C
hg19_v2_chr14_+_91580357_91580454	0.287761	SRY	ENST00000298858.4|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000521081.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000520328.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000256324.10|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000524232.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000522170.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000519950.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000523879.1|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000521077.2|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159 	ENST00000518665.2|C14orf159|ENSG00000133943.16|chromosome 14 open reading frame 159
hg19_v2_chr7_-_92855762_92855837	0.287588	SRY	ENST00000453812.2|HEPACAM2|ENSG00000188175.5|HEPACAM family member 2 	ENST00000394468.2|HEPACAM2|ENSG00000188175.5|HEPACAM family member 2
hg19_v2_chr3_-_62359180_62359202	0.283952	SRY	ENST00000283268.3|FEZF2|ENSG00000153266.8|FEZ family zinc finger 2
hg19_v2_chr1_+_97188188_97188273	0.274922	SRY	ENST00000541987.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr12_-_81763184_81763202	0.27239	SRY	ENST00000548670.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000541570.2|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000553058.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr9_-_37465396_37465454	0.270777	SRY	ENST00000307750.4|ZBTB5|ENSG00000168795.4|zinc finger and BTB domain containing 5
hg19_v2_chr12_-_122985067_122985268	0.270517	SRY	ENST00000540586.1|ZCCHC8|ENSG00000033030.9|zinc finger, CCHC domain containing 8 	ENST00000543897.1|ZCCHC8|ENSG00000033030.9|zinc finger, CCHC domain containing 8
hg19_v2_chr1_-_108231101_108231133	0.26847	SRY	ENST00000544443.1|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor 	ENST00000415432.2|VAV3|ENSG00000134215.11|vav 3 guanine nucleotide exchange factor
hg19_v2_chr16_+_2587965_2587994	0.265848	SRY	ENST00000342085.4|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1 	ENST00000566659.1|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1
hg19_v2_chr11_+_36317830_36317850	0.262056	SRY	ENST00000530639.1|PRR5L|ENSG00000135362.9|proline rich 5 like
hg19_v2_chr12_-_122985494_122985543	0.260848	SRY	ENST00000336229.4|ZCCHC8|ENSG00000033030.9|zinc finger, CCHC domain containing 8
hg19_v2_chr8_+_24151620_24151647	0.260227	SRY	ENST00000437154.2|ADAM28|ENSG00000042980.8|ADAM metallopeptidase domain 28
hg19_v2_chr1_+_43855560_43855640	0.259762	SRY	ENST00000562955.1|SZT2|ENSG00000198198.9|seizure threshold 2 homolog (mouse)
hg19_v2_chr5_-_146461027_146461054	0.248603	SRY	ENST00000394410.2|PPP2R2B|ENSG00000156475.14|protein phosphatase 2, regulatory subunit B, beta 	ENST00000508267.1|PPP2R2B|ENSG00000156475.14|protein phosphatase 2, regulatory subunit B, beta 	ENST00000504198.1|PPP2R2B|ENSG00000156475.14|protein phosphatase 2, regulatory subunit B, beta
hg19_v2_chr16_-_4323015_4323076	0.24701	SRY	ENST00000204517.6|TFAP4|ENSG00000090447.7|transcription factor AP-4 (activating enhancer binding protein 4)
hg19_v2_chr4_+_41614720_41614734	0.243984	SRY	ENST00000509277.1|LIMCH1|ENSG00000064042.13|LIM and calponin homology domains 1
hg19_v2_chr2_-_152146385_152146571	0.240765	SRY	ENST00000414946.1|NMI|ENSG00000123609.6|N-myc (and STAT) interactor 	ENST00000243346.5|NMI|ENSG00000123609.6|N-myc (and STAT) interactor
hg19_v2_chr6_-_116381918_116381977	0.23837	SRY	ENST00000606080.1|FRK|ENSG00000111816.6|fyn-related kinase
hg19_v2_chr8_+_144295067_144295131	0.233904	SRY	ENST00000330824.2|GPIHBP1|ENSG00000182851.2|glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
hg19_v2_chr6_+_139094657_139094657	0.229008	SRY	ENST00000332797.6|CCDC28A|ENSG00000024862.12|coiled-coil domain containing 28A
hg19_v2_chr9_+_84304628_84304764	0.227409	SRY	ENST00000437181.1|RP11-154D17.1|ENSG00000233926.1|RP11-154D17.1
hg19_v2_chr5_-_24645078_24645096	0.227238	SRY	ENST00000264463.4|CDH10|ENSG00000040731.6|cadherin 10, type 2 (T2-cadherin)
hg19_v2_chr6_-_79787902_79787958	0.227074	SRY	ENST00000275034.4|PHIP|ENSG00000146247.13|pleckstrin homology domain interacting protein
hg19_v2_chr6_+_157099036_157099086	0.227064	SRY	ENST00000350026.5|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000346085.5|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000367148.1|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like) 	ENST00000275248.4|ARID1B|ENSG00000049618.17|AT rich interactive domain 1B (SWI1-like)
hg19_v2_chr3_-_62358690_62358751	0.226909	SRY	ENST00000475839.1|FEZF2|ENSG00000153266.8|FEZ family zinc finger 2
hg19_v2_chr19_-_47734448_47734466	0.222632	SRY	ENST00000439096.2|BBC3|ENSG00000105327.11|BCL2 binding component 3
hg19_v2_chr3_+_112930387_112930431	0.221396	SRY	ENST00000485230.1|BOC|ENSG00000144857.10|BOC cell adhesion associated, oncogene regulated
hg19_v2_chr8_+_85095497_85095518	0.219383	SRY	ENST00000522455.1|RALYL|ENSG00000184672.7|RALY RNA binding protein-like 	ENST00000521695.1|RALYL|ENSG00000184672.7|RALY RNA binding protein-like
hg19_v2_chr12_-_10251603_10251619	0.219198	SRY	ENST00000457018.2|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr6_-_37665751_37665781	0.218775	SRY	ENST00000297153.7|MDGA1|ENSG00000112139.10|MAM domain containing glycosylphosphatidylinositol anchor 1 	ENST00000434837.3|MDGA1|ENSG00000112139.10|MAM domain containing glycosylphosphatidylinositol anchor 1
hg19_v2_chr3_+_189507460_189507471	0.217665	SRY	ENST00000434928.1|TP63|ENSG00000073282.8|tumor protein p63
hg19_v2_chr21_-_19191703_19191718	0.217429	SRY	ENST00000284881.4|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91 	ENST00000400559.3|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91 	ENST00000400558.3|C21orf91|ENSG00000154642.6|chromosome 21 open reading frame 91
hg19_v2_chr7_+_151038850_151038915	0.212677	SRY	ENST00000355851.4|NUB1|ENSG00000013374.11|negative regulator of ubiquitin-like proteins 1 	ENST00000566856.1|NUB1|ENSG00000013374.11|negative regulator of ubiquitin-like proteins 1 	ENST00000470229.1|NUB1|ENSG00000013374.11|negative regulator of ubiquitin-like proteins 1
hg19_v2_chr1_+_33116765_33117088	0.211698	SRY	ENST00000544435.1|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000373485.1|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000458695.2|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000490500.1|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4 	ENST00000445722.2|RBBP4|ENSG00000162521.14|retinoblastoma binding protein 4
hg19_v2_chr2_-_160473114_160473203	0.203546	SRY	ENST00000392783.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr12_-_10251539_10251560	0.200552	SRY	ENST00000420265.2|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr4_+_170581213_170581301	0.200206	SRY	ENST00000507875.1|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3
hg19_v2_chr2_-_227050079_227050093	0.195981	SRY	ENST00000423838.1|AC068138.1|ENSG00000235070.3|AC068138.1
hg19_v2_chr4_+_71494461_71494461	0.194802	SRY	ENST00000396073.3|ENAM|ENSG00000132464.7|enamelin
hg19_v2_chr2_-_160472952_160473080	0.194594	SRY	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr2_+_109204743_109204855	0.193464	SRY	ENST00000332345.6|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr2_-_133427767_133427797	0.192704	SRY	ENST00000397463.2|LYPD1|ENSG00000150551.10|LY6/PLAUR domain containing 1
hg19_v2_chr4_+_110749143_110749155	0.188432	SRY	ENST00000317735.4|RRH|ENSG00000180245.4|retinal pigment epithelium-derived rhodopsin homolog
hg19_v2_chr2_+_86947296_86947434	0.182433	SRY	ENST00000283632.4|RMND5A|ENSG00000153561.8|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg19_v2_chr3_-_10332416_10332446	0.182422	SRY	ENST00000450603.1|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide 	ENST00000449554.2|GHRL|ENSG00000157017.11|ghrelin/obestatin prepropeptide
hg19_v2_chr11_+_112832202_112832218	0.182333	SRY	ENST00000534015.1|NCAM1|ENSG00000149294.12|neural cell adhesion molecule 1
hg19_v2_chr1_-_115053781_115053853	0.180052	SRY	ENST00000358465.2|TRIM33|ENSG00000197323.6|tripartite motif containing 33 	ENST00000369543.2|TRIM33|ENSG00000197323.6|tripartite motif containing 33
hg19_v2_chrX_-_74145273_74145319	0.17009	SRY	ENST00000055682.6|KIAA2022|ENSG00000050030.9|KIAA2022
hg19_v2_chrX_-_39923656_39923802	0.168847	SRY	ENST00000413905.1|BCOR|ENSG00000183337.12|BCL6 corepressor
hg19_v2_chr22_+_19710468_19710468	0.168159	SRY	ENST00000366425.3|GP1BB|ENSG00000203618.5|glycoprotein Ib (platelet), beta polypeptide
hg19_v2_chr13_-_38443860_38443939	0.167658	SRY	ENST00000426868.2|TRPC4|ENSG00000133107.10|transient receptor potential cation channel, subfamily C, member 4 	ENST00000379681.3|TRPC4|ENSG00000133107.10|transient receptor potential cation channel, subfamily C, member 4 	ENST00000338947.5|TRPC4|ENSG00000133107.10|transient receptor potential cation channel, subfamily C, member 4 	ENST00000355779.2|TRPC4|ENSG00000133107.10|transient receptor potential cation channel, subfamily C, member 4 	ENST00000358477.2|TRPC4|ENSG00000133107.10|transient receptor potential cation channel, subfamily C, member 4 	ENST00000379673.2|TRPC4|ENSG00000133107.10|transient receptor potential cation channel, subfamily C, member 4
hg19_v2_chr9_-_123476612_123476698	0.166472	SRY	ENST00000426959.1|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr2_+_226265364_226265364	0.163715	SRY	ENST00000272907.6|NYAP2|ENSG00000144460.10|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2
hg19_v2_chr1_+_43855545_43855557	0.161653	SRY	ENST00000372450.4|SZT2|ENSG00000198198.9|seizure threshold 2 homolog (mouse) 	ENST00000310739.4|SZT2|ENSG00000198198.9|seizure threshold 2 homolog (mouse)
hg19_v2_chr15_-_86338100_86338132	0.161005	SRY	ENST00000536947.1|KLHL25|ENSG00000183655.11|kelch-like family member 25
hg19_v2_chr2_+_135596180_135596193	0.159953	SRY	ENST00000283054.4|ACMSD|ENSG00000153086.9|aminocarboxymuconate semialdehyde decarboxylase 	ENST00000392928.1|ACMSD|ENSG00000153086.9|aminocarboxymuconate semialdehyde decarboxylase
hg19_v2_chr7_+_29519486_29519549	0.159029	SRY	ENST00000409041.4|CHN2|ENSG00000106069.16|chimerin 2
hg19_v2_chr12_+_94542459_94542513	0.158699	SRY	ENST00000258526.4|PLXNC1|ENSG00000136040.4|plexin C1
hg19_v2_chr12_+_31477250_31477250	0.158369	SRY	ENST00000313737.4|AC024940.1|ENSG00000177340.4|AC024940.1
hg19_v2_chr1_+_164529004_164529060	0.156736	SRY	ENST00000559240.1|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1 	ENST00000367897.1|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1 	ENST00000540236.1|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1 	ENST00000401534.1|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr1_+_41174988_41175047	0.156469	SRY	ENST00000372652.1|NFYC|ENSG00000066136.15|nuclear transcription factor Y, gamma
hg19_v2_chr15_-_54025300_54025380	0.155438	SRY	ENST00000559418.1|WDR72|ENSG00000166415.10|WD repeat domain 72
hg19_v2_chr5_+_38148582_38148600	0.154609	SRY	ENST00000508853.1|CTD-2207A17.1|ENSG00000248461.1|CTD-2207A17.1
hg19_v2_chr12_+_498500_498529	0.151335	SRY	ENST00000540180.1|CCDC77|ENSG00000120647.5|coiled-coil domain containing 77 	ENST00000422000.1|CCDC77|ENSG00000120647.5|coiled-coil domain containing 77 	ENST00000535052.1|CCDC77|ENSG00000120647.5|coiled-coil domain containing 77
hg19_v2_chr5_+_138678131_138678169	0.148085	SRY	ENST00000394795.2|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2 	ENST00000510080.1|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2
hg19_v2_chr1_+_147374915_147374946	0.14776	SRY	ENST00000240986.4|GJA8|ENSG00000121634.4|gap junction protein, alpha 8, 50kDa
hg19_v2_chr17_-_73511584_73511664	0.144417	SRY	ENST00000321617.3|CASKIN2|ENSG00000177303.5|CASK interacting protein 2
hg19_v2_chr3_+_137490748_137490791	0.140138	SRY	ENST00000478772.1|RP11-2A4.3|ENSG00000239513.1|RP11-2A4.3
hg19_v2_chr14_+_58894103_58894124	0.139568	SRY	ENST00000354386.6|KIAA0586|ENSG00000100578.10|KIAA0586 	ENST00000556134.1|KIAA0586|ENSG00000100578.10|KIAA0586
hg19_v2_chr2_+_135596106_135596137	0.138531	SRY	ENST00000356140.5|ACMSD|ENSG00000153086.9|aminocarboxymuconate semialdehyde decarboxylase
hg19_v2_chr9_-_123476719_123476810	0.137056	SRY	ENST00000373930.3|MEGF9|ENSG00000106780.7|multiple EGF-like-domains 9
hg19_v2_chr8_+_85095769_85095793	0.136534	SRY	ENST00000518566.1|RALYL|ENSG00000184672.7|RALY RNA binding protein-like
hg19_v2_chr8_-_57123815_57123867	0.136447	SRY	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr2_+_177028805_177028805	0.136307	SRY	ENST00000249440.3|HOXD3|ENSG00000128652.7|homeobox D3
hg19_v2_chr3_+_89156799_89156831	0.132401	SRY	ENST00000452448.2|EPHA3|ENSG00000044524.6|EPH receptor A3 	ENST00000494014.1|EPHA3|ENSG00000044524.6|EPH receptor A3
hg19_v2_chr10_-_32667660_32667735	0.131547	SRY	ENST00000375110.2|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila)
hg19_v2_chr20_+_32150140_32150230	0.130443	SRY	ENST00000344201.3|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000346541.3|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000397800.1|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000397798.2|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000492345.1|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg19_v2_chr15_-_86338134_86338261	0.129672	SRY	ENST00000337975.5|KLHL25|ENSG00000183655.11|kelch-like family member 25
hg19_v2_chr11_-_30608413_30608423	0.126778	SRY	ENST00000528686.1|MPPED2|ENSG00000066382.12|metallophosphoesterase domain containing 2
hg19_v2_chr8_-_145060593_145060634	0.125808	SRY	ENST00000313059.5|PARP10|ENSG00000178685.9|poly (ADP-ribose) polymerase family, member 10 	ENST00000524918.1|PARP10|ENSG00000178685.9|poly (ADP-ribose) polymerase family, member 10 	ENST00000313028.7|PARP10|ENSG00000178685.9|poly (ADP-ribose) polymerase family, member 10 	ENST00000525773.1|PARP10|ENSG00000178685.9|poly (ADP-ribose) polymerase family, member 10
hg19_v2_chr11_-_118095718_118095753	0.120571	SRY	ENST00000526620.1|AMICA1|ENSG00000160593.13|adhesion molecule, interacts with CXADR antigen 1
hg19_v2_chr3_+_142342228_142342236	0.119453	SRY	ENST00000337777.3|PLS1|ENSG00000120756.8|plastin 1
hg19_v2_chr1_-_53018654_53018777	0.111951	SRY	ENST00000257177.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000355809.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000528642.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000470626.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000371544.3|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11
hg19_v2_chr4_+_71263599_71263668	0.110669	SRY	ENST00000399575.2|PROL1|ENSG00000171199.5|proline rich, lacrimal 1
hg19_v2_chr14_+_58894141_58894155	0.110197	SRY	ENST00000423743.3|KIAA0586|ENSG00000100578.10|KIAA0586
hg19_v2_chr8_+_57124245_57124369	0.108857	SRY	ENST00000521831.1|CHCHD7|ENSG00000170791.13|coiled-coil-helix-coiled-coil-helix domain containing 7 	ENST00000355315.3|CHCHD7|ENSG00000170791.13|coiled-coil-helix-coiled-coil-helix domain containing 7 	ENST00000303759.3|CHCHD7|ENSG00000170791.13|coiled-coil-helix-coiled-coil-helix domain containing 7 	ENST00000517636.1|CHCHD7|ENSG00000170791.13|coiled-coil-helix-coiled-coil-helix domain containing 7 	ENST00000517933.1|CHCHD7|ENSG00000170791.13|coiled-coil-helix-coiled-coil-helix domain containing 7 	ENST00000518801.1|CHCHD7|ENSG00000170791.13|coiled-coil-helix-coiled-coil-helix domain containing 7 	ENST00000523975.1|CHCHD7|ENSG00000170791.13|coiled-coil-helix-coiled-coil-helix domain containing 7 	ENST00000396723.5|CHCHD7|ENSG00000170791.13|coiled-coil-helix-coiled-coil-helix domain containing 7 	ENST00000523061.1|CHCHD7|ENSG00000170791.13|coiled-coil-helix-coiled-coil-helix domain containing 7 	ENST00000521524.1|CHCHD7|ENSG00000170791.13|coiled-coil-helix-coiled-coil-helix domain containing 7
hg19_v2_chr14_+_58894706_58894720	0.107592	SRY	ENST00000261244.5|KIAA0586|ENSG00000100578.10|KIAA0586
hg19_v2_chr15_-_88799948_88799978	0.104963	SRY	ENST00000394480.2|NTRK3|ENSG00000140538.12|neurotrophic tyrosine kinase, receptor, type 3
hg19_v2_chr19_-_46272462_46272562	0.104102	SRY	ENST00000317578.6|SIX5|ENSG00000177045.6|SIX homeobox 5
hg19_v2_chr16_-_4852915_4852951	0.10289	SRY	ENST00000322048.7|ROGDI|ENSG00000067836.8|rogdi homolog (Drosophila)
hg19_v2_chr10_+_111967345_111967442	0.101942	SRY	ENST00000332674.5|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein 	ENST00000453116.1|MXI1|ENSG00000119950.16|MAX interactor 1, dimerization protein
hg19_v2_chr1_+_235490659_235490670	0.0990989	SRY	ENST00000488594.1|GGPS1|ENSG00000152904.7|geranylgeranyl diphosphate synthase 1
hg19_v2_chr11_-_118095801_118095814	0.0974734	SRY	ENST00000356289.5|AMICA1|ENSG00000160593.13|adhesion molecule, interacts with CXADR antigen 1
hg19_v2_chr16_+_28858004_28858029	0.0973114	SRY	ENST00000322610.8|SH2B1|ENSG00000178188.10|SH2B adaptor protein 1
hg19_v2_chr12_-_498620_498693	0.0927531	SRY	ENST00000399788.2|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A 	ENST00000382815.4|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A
hg19_v2_chr18_+_11851383_11851399	0.0925303	SRY	ENST00000526991.2|CHMP1B|ENSG00000255112.2|charged multivesicular body protein 1B
hg19_v2_chr22_+_40297079_40297104	0.0923607	SRY	ENST00000344138.4|GRAP2|ENSG00000100351.12|GRB2-related adaptor protein 2 	ENST00000543252.1|GRAP2|ENSG00000100351.12|GRB2-related adaptor protein 2
hg19_v2_chr16_+_6069586_6069602	0.0914055	SRY	ENST00000547372.1|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1
hg19_v2_chrX_-_19689106_19689129	0.0906372	SRY	ENST00000379716.1|SH3KBP1|ENSG00000147010.13|SH3-domain kinase binding protein 1
hg19_v2_chr20_+_18125727_18125755	0.0867396	SRY	ENST00000489634.2|CSRP2BP|ENSG00000149474.9|CSRP2 binding protein
hg19_v2_chr12_-_86650045_86650076	0.0864475	SRY	ENST00000604798.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr5_+_140201183_140201361	0.0851656	SRY	ENST00000529619.1|PCDHA5|ENSG00000204965.4|protocadherin alpha 5 	ENST00000529859.1|PCDHA5|ENSG00000204965.4|protocadherin alpha 5 	ENST00000378126.3|PCDHA5|ENSG00000204965.4|protocadherin alpha 5
hg19_v2_chr2_-_37899323_37899374	0.0836376	SRY	ENST00000295324.3|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3 	ENST00000457889.1|CDC42EP3|ENSG00000163171.6|CDC42 effector protein (Rho GTPase binding) 3
hg19_v2_chr19_-_46272106_46272115	0.0829849	SRY	ENST00000560168.1|SIX5|ENSG00000177045.6|SIX homeobox 5
hg19_v2_chrX_-_16887963_16888014	0.0800712	SRY	ENST00000380084.4|RBBP7|ENSG00000102054.13|retinoblastoma binding protein 7
hg19_v2_chr8_-_93115445_93115462	0.0773528	SRY	ENST00000523629.1|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr9_-_16727978_16728010	0.076427	SRY	ENST00000418777.1|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000468187.2|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr10_-_104953009_104953061	0.0759257	SRY	ENST00000470299.1|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II 	ENST00000343289.5|NT5C2|ENSG00000076685.14|5'-nucleotidase, cytosolic II
hg19_v2_chr1_-_151119087_151119114	0.0754942	SRY	ENST00000341697.3|SEMA6C|ENSG00000143434.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C 	ENST00000368914.3|SEMA6C|ENSG00000143434.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C
hg19_v2_chr5_+_138677515_138677581	0.0734769	SRY	ENST00000265192.4|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2 	ENST00000511706.1|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2
hg19_v2_chr2_-_190927447_190927466	0.0732658	SRY	ENST00000260950.4|MSTN|ENSG00000138379.4|myostatin
hg19_v2_chr17_-_39183452_39183468	0.0722397	SRY	ENST00000361883.5|KRTAP1-5|ENSG00000221852.4|keratin associated protein 1-5
hg19_v2_chr1_+_66797687_66797884	0.0714811	SRY	ENST00000371045.5|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific 	ENST00000531025.1|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific 	ENST00000526197.1|PDE4B|ENSG00000184588.13|phosphodiesterase 4B, cAMP-specific
hg19_v2_chr14_-_55878538_55878576	0.0704991	SRY	ENST00000247178.5|ATG14|ENSG00000126775.8|autophagy related 14
hg19_v2_chr2_+_109204909_109204928	0.0685019	SRY	ENST00000393310.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr7_+_29519662_29519727	0.0679651	SRY	ENST00000424025.2|CHN2|ENSG00000106069.16|chimerin 2 	ENST00000439711.2|CHN2|ENSG00000106069.16|chimerin 2 	ENST00000421775.2|CHN2|ENSG00000106069.16|chimerin 2
hg19_v2_chr20_-_21378666_21378666	0.0673975	SRY	ENST00000351817.4|NKX2-4|ENSG00000125816.4|NK2 homeobox 4
hg19_v2_chr2_-_231989808_231989832	0.066986	SRY	ENST00000258400.3|HTR2B|ENSG00000135914.5|5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled
hg19_v2_chr8_-_13134045_13134063	0.0665458	SRY	ENST00000512044.2|DLC1|ENSG00000164741.10|deleted in liver cancer 1
hg19_v2_chrX_+_84499038_84499078	0.0660392	SRY	ENST00000373165.3|ZNF711|ENSG00000147180.12|zinc finger protein 711
hg19_v2_chr12_-_31477072_31477110	0.0614689	SRY	ENST00000454658.2|FAM60A|ENSG00000139146.9|family with sequence similarity 60, member A
hg19_v2_chr3_-_69129501_69129559	0.0614577	SRY	ENST00000540295.1|UBA3|ENSG00000144744.12|ubiquitin-like modifier activating enzyme 3 	ENST00000415609.2|UBA3|ENSG00000144744.12|ubiquitin-like modifier activating enzyme 3 	ENST00000361055.4|UBA3|ENSG00000144744.12|ubiquitin-like modifier activating enzyme 3 	ENST00000349511.4|UBA3|ENSG00000144744.12|ubiquitin-like modifier activating enzyme 3
hg19_v2_chr6_+_105404899_105404931	0.0608863	SRY	ENST00000345080.4|LIN28B|ENSG00000187772.6|lin-28 homolog B (C. elegans)
hg19_v2_chr3_+_28390637_28390705	0.0577975	SRY	ENST00000420223.1|ZCWPW2|ENSG00000206559.3|zinc finger, CW type with PWWP domain 2 	ENST00000383768.2|ZCWPW2|ENSG00000206559.3|zinc finger, CW type with PWWP domain 2
hg19_v2_chr17_-_79212825_79212865	0.0576369	SRY	ENST00000374769.2|ENTHD2|ENSG00000167302.5|ENTH domain containing 2
hg19_v2_chr2_+_27665232_27665286	0.0560076	SRY	ENST00000543753.1|KRTCAP3|ENSG00000157992.8|keratinocyte associated protein 3 	ENST00000288873.3|KRTCAP3|ENSG00000157992.8|keratinocyte associated protein 3
hg19_v2_chr18_+_18943554_18943587	0.0555344	SRY	ENST00000580732.2|GREB1L|ENSG00000141449.10|growth regulation by estrogen in breast cancer-like
hg19_v2_chr17_-_46671323_46671323	0.054823	SRY	ENST00000239151.5|HOXB5|ENSG00000120075.5|homeobox B5
hg19_v2_chr20_-_35492048_35492118	0.0538247	SRY	ENST00000237536.4|SOGA1|ENSG00000149639.10|suppressor of glucose, autophagy associated 1
hg19_v2_chrX_-_110655306_110655330	0.0526068	SRY	ENST00000371993.2|DCX|ENSG00000077279.12|doublecortin
hg19_v2_chr17_-_46716647_46716665	0.0497103	SRY	ENST00000608940.1|RP11-357H14.17|ENSG00000272763.1|RP11-357H14.17
hg19_v2_chr2_+_27665289_27665331	0.0462794	SRY	ENST00000407293.1|KRTCAP3|ENSG00000157992.8|keratinocyte associated protein 3
hg19_v2_chr9_-_23826298_23826344	0.0445255	SRY	ENST00000380117.1|ELAVL2|ENSG00000107105.10|ELAV like neuron-specific RNA binding protein 2
hg19_v2_chr8_-_145688231_145688261	0.0437653	SRY	ENST00000530374.1|CYHR1|ENSG00000187954.8|cysteine/histidine-rich 1
hg19_v2_chr22_+_40297105_40297116	0.0434153	SRY	ENST00000540310.1|GRAP2|ENSG00000100351.12|GRB2-related adaptor protein 2
hg19_v2_chr1_+_185703513_185703683	0.0433644	SRY	ENST00000271588.4|HMCN1|ENSG00000143341.7|hemicentin 1 	ENST00000367492.2|HMCN1|ENSG00000143341.7|hemicentin 1
hg19_v2_chrX_+_78003204_78003248	0.0432932	SRY	ENST00000435339.3|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4 	ENST00000514744.1|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4
hg19_v2_chr16_-_46797149_46797169	0.0431334	SRY	ENST00000536476.1|MYLK3|ENSG00000140795.8|myosin light chain kinase 3
hg19_v2_chr3_-_141868293_141868355	0.0426375	SRY	ENST00000317104.7|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2) 	ENST00000494358.1|TFDP2|ENSG00000114126.13|transcription factor Dp-2 (E2F dimerization partner 2)
hg19_v2_chr15_+_98503922_98503964	0.0425742	SRY	ENST00000268042.6|ARRDC4|ENSG00000140450.7|arrestin domain containing 4
hg19_v2_chr18_+_46065483_46065540	0.0393502	SRY	ENST00000382998.4|CTIF|ENSG00000134030.9|CBP80/20-dependent translation initiation factor
hg19_v2_chr4_+_71457970_71457974	0.0372813	SRY	ENST00000322937.6|AMBN|ENSG00000178522.10|ameloblastin (enamel matrix protein)
hg19_v2_chr8_+_67405755_67405789	0.0362807	SRY	ENST00000521495.1|C8orf46|ENSG00000169085.7|chromosome 8 open reading frame 46
hg19_v2_chr17_-_79212884_79212895	0.0337395	SRY	ENST00000300714.3|ENTHD2|ENSG00000167302.5|ENTH domain containing 2
hg19_v2_chr11_+_67007518_67007533	0.0283568	SRY	ENST00000530342.1|KDM2A|ENSG00000173120.10|lysine (K)-specific demethylase 2A 	ENST00000308783.5|KDM2A|ENSG00000173120.10|lysine (K)-specific demethylase 2A
hg19_v2_chr3_+_178253993_178254025	0.0275292	SRY	ENST00000420517.2|KCNMB2|ENSG00000197584.7|potassium large conductance calcium-activated channel, subfamily M, beta member 2 	ENST00000452583.1|KCNMB2|ENSG00000197584.7|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg19_v2_chr4_-_76598326_76598346	0.0269024	SRY	ENST00000503660.1|G3BP2|ENSG00000138757.10|GTPase activating protein (SH3 domain) binding protein 2
hg19_v2_chr1_-_43855479_43855486	0.0246984	SRY	ENST00000290663.6|MED8|ENSG00000159479.12|mediator complex subunit 8 	ENST00000372457.4|MED8|ENSG00000159479.12|mediator complex subunit 8
hg19_v2_chr16_+_6069072_6069132	0.0230258	SRY	ENST00000547605.1|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000550418.1|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000553186.1|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1
hg19_v2_chr8_-_87755878_87755933	0.0214125	SRY	ENST00000320005.5|CNGB3|ENSG00000170289.8|cyclic nucleotide gated channel beta 3
hg19_v2_chr1_-_102312517_102312566	0.0210648	SRY	ENST00000338858.5|OLFM3|ENSG00000118733.12|olfactomedin 3
hg19_v2_chr8_+_92261516_92261555	0.0205526	SRY	ENST00000276609.3|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7 	ENST00000309536.2|SLC26A7|ENSG00000147606.4|solute carrier family 26 (anion exchanger), member 7
hg19_v2_chr14_+_22985251_22985251	0.0197677	SRY	ENST00000390510.1|TRAJ27|ENSG00000211862.1|T cell receptor alpha joining 27
hg19_v2_chr5_+_60933634_60933637	0.0193539	SRY	ENST00000505642.1|C5orf64|ENSG00000178722.8|chromosome 5 open reading frame 64
hg19_v2_chr11_-_35440796_35440916	0.0169688	SRY	ENST00000278379.3|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr1_+_84630367_84630400	0.0168484	SRY	ENST00000370680.1|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr1_+_25664408_25664408	0.0151004	SRY	ENST00000374358.4|TMEM50A|ENSG00000183726.6|transmembrane protein 50A
hg19_v2_chr22_+_31795509_31795567	0.0140567	SRY	ENST00000331457.4|DRG1|ENSG00000185721.7|developmentally regulated GTP binding protein 1
hg19_v2_chr11_-_35441524_35441578	0.0105429	SRY	ENST00000395750.1|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2 	ENST00000449068.1|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr15_+_49715293_49715448	0.00995979	SRY	ENST00000267843.4|FGF7|ENSG00000140285.5|fibroblast growth factor 7 	ENST00000560270.1|FGF7|ENSG00000140285.5|fibroblast growth factor 7
hg19_v2_chr7_+_142985308_142985453	0.00836681	SRY	ENST00000310447.5|CASP2|ENSG00000106144.15|caspase 2, apoptosis-related cysteine peptidase
hg19_v2_chr9_-_14314566_14314618	0.00817255	SRY	ENST00000397579.2|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr2_-_219925189_219925189	0.00734091	SRY	ENST00000295731.6|IHH|ENSG00000163501.6|indian hedgehog
hg19_v2_chr17_+_27573875_27573881	0.00720016	SRY	ENST00000225387.3|CRYBA1|ENSG00000108255.3|crystallin, beta A1
hg19_v2_chr13_-_33760216_33760234	0.00717559	SRY	ENST00000255486.4|STARD13|ENSG00000133121.16|StAR-related lipid transfer (START) domain containing 13
hg19_v2_chr5_-_131132658_131132719	0.00674369	SRY	ENST00000514667.1|CTC-432M15.3|ENSG00000273217.1|Folliculin-interacting protein 1  	ENST00000511848.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000510461.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr6_+_108882069_108882087	0.00601727	SRY	ENST00000406360.1|FOXO3|ENSG00000118689.10|forkhead box O3
hg19_v2_chr6_+_31082603_31082612	0.00600518	SRY	ENST00000259881.9|PSORS1C1|ENSG00000204540.6|psoriasis susceptibility 1 candidate 1
hg19_v2_chr2_+_220042933_220042985	0.00442934	SRY	ENST00000430297.2|FAM134A|ENSG00000144567.6|family with sequence similarity 134, member A
hg19_v2_chr7_-_27219849_27219880	0.00382963	SRY	ENST00000396344.4|HOXA10|ENSG00000253293.3|homeobox A10
hg19_v2_chr17_-_46703826_46703845	0.00334155	SRY	ENST00000550387.1|HOXB9|ENSG00000170689.8|homeobox B9 	ENST00000311177.5|HOXB9|ENSG00000170689.8|homeobox B9
hg19_v2_chr6_-_42418999_42419087	0.00206282	SRY	ENST00000340840.2|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1 	ENST00000354325.2|TRERF1|ENSG00000124496.8|transcriptional regulating factor 1
hg19_v2_chr3_+_173302222_173302345	0.00161542	SRY	ENST00000361589.4|NLGN1|ENSG00000169760.13|neuroligin 1
