hg19_v2_chr21_-_43916433_43916464	212.143	RFX3_RFX2	ENST00000291536.3|RSPH1|ENSG00000160188.5|radial spoke head 1 homolog (Chlamydomonas)
hg19_v2_chr21_-_43916296_43916363	202.607	RFX3_RFX2	ENST00000398352.3|RSPH1|ENSG00000160188.5|radial spoke head 1 homolog (Chlamydomonas)
hg19_v2_chr1_-_109656439_109656492	176.549	RFX3_RFX2	ENST00000369949.4|C1orf194|ENSG00000179902.8|chromosome 1 open reading frame 194
hg19_v2_chr1_-_159869912_159869966	132.24	RFX3_RFX2	ENST00000368099.4|CCDC19|ENSG00000213085.5|coiled-coil domain containing 19
hg19_v2_chr16_-_67427389_67427438	120.512	RFX3_RFX2	ENST00000562206.1|TPPP3|ENSG00000159713.6|tubulin polymerization-promoting protein family member 3 	ENST00000290942.5|TPPP3|ENSG00000159713.6|tubulin polymerization-promoting protein family member 3 	ENST00000393957.2|TPPP3|ENSG00000159713.6|tubulin polymerization-promoting protein family member 3
hg19_v2_chr1_+_151682909_151682909	119.642	RFX3_RFX2	ENST00000326413.3|RIIAD1|ENSG00000178796.8|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1 	ENST00000442233.2|AL589765.1|ENSG00000240510.2|Uncharacterized protein; cDNA FLJ36032 fis, clone TESTI2017069
hg19_v2_chr22_+_23487513_23487707	111.673	RFX3_RFX2	ENST00000263116.2|RAB36|ENSG00000100228.8|RAB36, member RAS oncogene family 	ENST00000341989.4|RAB36|ENSG00000100228.8|RAB36, member RAS oncogene family
hg19_v2_chr17_-_6735035_6735080	107.897	RFX3_RFX2	ENST00000338694.2|TEKT1|ENSG00000167858.8|tektin 1
hg19_v2_chr17_-_6735012_6735030	107.533	RFX3_RFX2	ENST00000535086.1|TEKT1|ENSG00000167858.8|tektin 1
hg19_v2_chr15_+_71184931_71184974	105.183	RFX3_RFX2	ENST00000560369.1|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49 	ENST00000260382.5|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49
hg19_v2_chr15_+_71185148_71185214	104.958	RFX3_RFX2	ENST00000443425.2|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49 	ENST00000560755.1|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49
hg19_v2_chr2_+_228736321_228736332	104.81	RFX3_RFX2	ENST00000309931.2|DAW1|ENSG00000123977.5|dynein assembly factor with WDR repeat domains 1
hg19_v2_chr17_-_74137374_74137385	103.205	RFX3_RFX2	ENST00000322957.6|FOXJ1|ENSG00000129654.7|forkhead box J1
hg19_v2_chr1_+_38022572_38022613	99.7125	RFX3_RFX2	ENST00000541606.1|DNALI1|ENSG00000163879.9|dynein, axonemal, light intermediate chain 1
hg19_v2_chr6_+_43612750_43612791	98.2564	RFX3_RFX2	ENST00000372165.4|RSPH9|ENSG00000172426.11|radial spoke head 9 homolog (Chlamydomonas) 	ENST00000372163.4|RSPH9|ENSG00000172426.11|radial spoke head 9 homolog (Chlamydomonas)
hg19_v2_chr3_-_197676740_197676802	94.2858	RFX3_RFX2	ENST00000452735.1|IQCG|ENSG00000114473.9|IQ motif containing G 	ENST00000453254.1|IQCG|ENSG00000114473.9|IQ motif containing G 	ENST00000455191.1|IQCG|ENSG00000114473.9|IQ motif containing G
hg19_v2_chr1_-_169396666_169396719	92.9478	RFX3_RFX2	ENST00000456107.1|CCDC181|ENSG00000117477.8|coiled-coil domain containing 181 	ENST00000367805.3|CCDC181|ENSG00000117477.8|coiled-coil domain containing 181
hg19_v2_chr2_+_228736335_228736397	92.7524	RFX3_RFX2	ENST00000440997.1|DAW1|ENSG00000123977.5|dynein assembly factor with WDR repeat domains 1 	ENST00000545118.1|DAW1|ENSG00000123977.5|dynein assembly factor with WDR repeat domains 1
hg19_v2_chr3_-_50383096_50383168	91.9564	RFX3_RFX2	ENST00000442887.1|ZMYND10|ENSG00000004838.9|zinc finger, MYND-type containing 10 	ENST00000360165.3|ZMYND10|ENSG00000004838.9|zinc finger, MYND-type containing 10
hg19_v2_chr11_+_111385497_111385541	91.3521	RFX3_RFX2	ENST00000375618.4|C11orf88|ENSG00000183644.9|chromosome 11 open reading frame 88 	ENST00000529167.1|C11orf88|ENSG00000183644.9|chromosome 11 open reading frame 88 	ENST00000332814.6|C11orf88|ENSG00000183644.9|chromosome 11 open reading frame 88
hg19_v2_chr1_-_169396646_169396660	89.7466	RFX3_RFX2	ENST00000367806.3|CCDC181|ENSG00000117477.8|coiled-coil domain containing 181
hg19_v2_chr1_+_38022513_38022571	89.2063	RFX3_RFX2	ENST00000296218.7|DNALI1|ENSG00000163879.9|dynein, axonemal, light intermediate chain 1
hg19_v2_chr9_+_124922171_124922224	88.1922	RFX3_RFX2	ENST00000373764.3|MORN5|ENSG00000185681.8|MORN repeat containing 5 	ENST00000536616.1|MORN5|ENSG00000185681.8|MORN repeat containing 5
hg19_v2_chr3_-_167098059_167098120	87.2541	RFX3_RFX2	ENST00000392764.1|ZBBX|ENSG00000169064.8|zinc finger, B-box domain containing 	ENST00000474464.1|ZBBX|ENSG00000169064.8|zinc finger, B-box domain containing 	ENST00000392766.2|ZBBX|ENSG00000169064.8|zinc finger, B-box domain containing 	ENST00000485651.1|ZBBX|ENSG00000169064.8|zinc finger, B-box domain containing
hg19_v2_chrX_-_48693955_48694035	86.7326	RFX3_RFX2	ENST00000218230.5|PCSK1N|ENSG00000102109.7|proprotein convertase subtilisin/kexin type 1 inhibitor
hg19_v2_chr2_-_130902567_130902707	86.7259	RFX3_RFX2	ENST00000457413.1|CCDC74B|ENSG00000152076.14|coiled-coil domain containing 74B 	ENST00000392984.3|CCDC74B|ENSG00000152076.14|coiled-coil domain containing 74B 	ENST00000409128.1|CCDC74B|ENSG00000152076.14|coiled-coil domain containing 74B 	ENST00000441670.1|CCDC74B|ENSG00000152076.14|coiled-coil domain containing 74B 	ENST00000409943.3|CCDC74B|ENSG00000152076.14|coiled-coil domain containing 74B 	ENST00000409234.3|CCDC74B|ENSG00000152076.14|coiled-coil domain containing 74B 	ENST00000310463.6|CCDC74B|ENSG00000152076.14|coiled-coil domain containing 74B
hg19_v2_chr11_+_101918153_101918198	85.3758	RFX3_RFX2	ENST00000434758.2|C11orf70|ENSG00000137691.8|chromosome 11 open reading frame 70 	ENST00000526781.1|C11orf70|ENSG00000137691.8|chromosome 11 open reading frame 70 	ENST00000534360.1|C11orf70|ENSG00000137691.8|chromosome 11 open reading frame 70
hg19_v2_chr2_+_132285406_132285453	84.1415	RFX3_RFX2	ENST00000295171.6|CCDC74A|ENSG00000163040.10|coiled-coil domain containing 74A 	ENST00000409856.3|CCDC74A|ENSG00000163040.10|coiled-coil domain containing 74A
hg19_v2_chr7_+_48075108_48075151	83.4445	RFX3_RFX2	ENST00000420324.1|C7orf57|ENSG00000164746.9|chromosome 7 open reading frame 57 	ENST00000435376.1|C7orf57|ENSG00000164746.9|chromosome 7 open reading frame 57 	ENST00000430738.1|C7orf57|ENSG00000164746.9|chromosome 7 open reading frame 57 	ENST00000348904.3|C7orf57|ENSG00000164746.9|chromosome 7 open reading frame 57 	ENST00000539619.1|C7orf57|ENSG00000164746.9|chromosome 7 open reading frame 57
hg19_v2_chr12_+_7014064_7014075	80.1333	RFX3_RFX2	ENST00000443597.2|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr17_+_9479944_9479965	79.168	RFX3_RFX2	ENST00000396219.3|WDR16|ENSG00000166596.10|WD repeat domain 16 	ENST00000352665.5|WDR16|ENSG00000166596.10|WD repeat domain 16
hg19_v2_chr1_+_217804661_217804672	78.5225	RFX3_RFX2	ENST00000366933.4|SPATA17|ENSG00000162814.6|spermatogenesis associated 17
hg19_v2_chrX_+_106449862_106449880	77.2699	RFX3_RFX2	ENST00000372453.3|PIH1D3|ENSG00000080572.8|PIH1 domain containing 3 	ENST00000535523.1|PIH1D3|ENSG00000080572.8|PIH1 domain containing 3
hg19_v2_chr1_+_151693984_151694016	76.8778	RFX3_RFX2	ENST00000479191.1|RIIAD1|ENSG00000178796.8|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1
hg19_v2_chr8_-_49647791_49647873	75.764	RFX3_RFX2	ENST00000262103.3|EFCAB1|ENSG00000034239.6|EF-hand calcium binding domain 1 	ENST00000523092.1|EFCAB1|ENSG00000034239.6|EF-hand calcium binding domain 1 	ENST00000433756.1|EFCAB1|ENSG00000034239.6|EF-hand calcium binding domain 1
hg19_v2_chr11_-_75379612_75379726	75.4961	RFX3_RFX2	ENST00000526740.1|MAP6|ENSG00000171533.7|microtubule-associated protein 6
hg19_v2_chr6_+_52285131_52285182	74.6852	RFX3_RFX2	ENST00000433625.2|EFHC1|ENSG00000096093.10|EF-hand domain (C-terminal) containing 1
hg19_v2_chr11_+_94245617_94245747	74.0137	RFX3_RFX2	ENST00000542198.1|RP11-867G2.2|ENSG00000257057.1|long intergenic non-protein coding RNA 1171
hg19_v2_chr12_+_7013897_7014045	73.2681	RFX3_RFX2	ENST00000007969.8|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23 	ENST00000323702.5|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr16_-_75590114_75590184	70.7911	RFX3_RFX2	ENST00000568377.1|TMEM231|ENSG00000205084.6|transmembrane protein 231 	ENST00000565067.1|TMEM231|ENSG00000205084.6|transmembrane protein 231 	ENST00000258173.6|TMEM231|ENSG00000205084.6|transmembrane protein 231
hg19_v2_chr15_+_82555125_82555168	70.655	RFX3_RFX2	ENST00000566205.1|FAM154B|ENSG00000188659.5|family with sequence similarity 154, member B 	ENST00000339465.5|FAM154B|ENSG00000188659.5|family with sequence similarity 154, member B 	ENST00000569120.1|FAM154B|ENSG00000188659.5|family with sequence similarity 154, member B 	ENST00000566861.1|FAM154B|ENSG00000188659.5|family with sequence similarity 154, member B
hg19_v2_chr12_-_58329819_58329867	69.9747	RFX3_RFX2	ENST00000551421.1|RP11-620J15.3|ENSG00000257698.1|RP11-620J15.3
hg19_v2_chr1_-_36916066_36916092	68.9233	RFX3_RFX2	ENST00000315643.9|OSCP1|ENSG00000116885.14|organic solute carrier partner 1
hg19_v2_chr11_-_111944895_111944998	68.7469	RFX3_RFX2	ENST00000431456.1|PIH1D2|ENSG00000150773.6|PIH1 domain containing 2 	ENST00000280350.4|PIH1D2|ENSG00000150773.6|PIH1 domain containing 2 	ENST00000530641.1|PIH1D2|ENSG00000150773.6|PIH1 domain containing 2
hg19_v2_chr11_-_111944704_111944774	68.047	RFX3_RFX2	ENST00000532211.1|PIH1D2|ENSG00000150773.6|PIH1 domain containing 2
hg19_v2_chr15_+_43803143_43803158	67.9909	RFX3_RFX2	ENST00000382031.1|MAP1A|ENSG00000166963.8|microtubule-associated protein 1A
hg19_v2_chr6_+_116937636_116937787	67.9842	RFX3_RFX2	ENST00000368581.4|RSPH4A|ENSG00000111834.8|radial spoke head 4 homolog A (Chlamydomonas) 	ENST00000229554.5|RSPH4A|ENSG00000111834.8|radial spoke head 4 homolog A (Chlamydomonas) 	ENST00000368580.4|RSPH4A|ENSG00000111834.8|radial spoke head 4 homolog A (Chlamydomonas)
hg19_v2_chr11_-_8615507_8615555	67.4466	RFX3_RFX2	ENST00000431279.2|STK33|ENSG00000130413.11|serine/threonine kinase 33 	ENST00000418597.1|STK33|ENSG00000130413.11|serine/threonine kinase 33
hg19_v2_chr12_+_7014126_7014192	67.0953	RFX3_RFX2	ENST00000415834.1|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23 	ENST00000436789.1|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr3_-_169530574_169530774	66.5766	RFX3_RFX2	ENST00000316515.7|LRRC34|ENSG00000171757.11|leucine rich repeat containing 34 	ENST00000522830.1|LRRC34|ENSG00000171757.11|leucine rich repeat containing 34 	ENST00000522526.2|LRRC34|ENSG00000171757.11|leucine rich repeat containing 34
hg19_v2_chr3_-_169530452_169530485	65.4812	RFX3_RFX2	ENST00000446859.1|LRRC34|ENSG00000171757.11|leucine rich repeat containing 34
hg19_v2_chr16_+_84178874_84178931	64.8219	RFX3_RFX2	ENST00000378553.5|DNAAF1|ENSG00000154099.13|dynein, axonemal, assembly factor 1
hg19_v2_chr6_+_112408768_112408894	61.6165	RFX3_RFX2	ENST00000368656.2|FAM229B|ENSG00000203778.3|family with sequence similarity 229, member B 	ENST00000604268.1|FAM229B|ENSG00000203778.3|family with sequence similarity 229, member B
hg19_v2_chr4_-_177116772_177116822	61.5623	RFX3_RFX2	ENST00000280191.2|SPATA4|ENSG00000150628.2|spermatogenesis associated 4
hg19_v2_chr15_+_81426588_81426639	61.1183	RFX3_RFX2	ENST00000286732.4|C15orf26|ENSG00000156206.9|chromosome 15 open reading frame 26
hg19_v2_chr6_-_109761707_109761866	60.2187	RFX3_RFX2	ENST00000520723.1|PPIL6|ENSG00000185250.11|peptidylprolyl isomerase (cyclophilin)-like 6 	ENST00000518648.1|PPIL6|ENSG00000185250.11|peptidylprolyl isomerase (cyclophilin)-like 6 	ENST00000417394.2|PPIL6|ENSG00000185250.11|peptidylprolyl isomerase (cyclophilin)-like 6
hg19_v2_chr20_-_3762087_3762100	57.7072	RFX3_RFX2	ENST00000379756.3|SPEF1|ENSG00000101222.8|sperm flagellar 1
hg19_v2_chr1_-_183622442_183622457	57.204	RFX3_RFX2	ENST00000308641.4|APOBEC4|ENSG00000173627.6|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)
hg19_v2_chr16_+_57728701_57728748	56.9475	RFX3_RFX2	ENST00000569375.1|CCDC135|ENSG00000159625.10|coiled-coil domain containing 135 	ENST00000360716.3|CCDC135|ENSG00000159625.10|coiled-coil domain containing 135 	ENST00000569167.1|CCDC135|ENSG00000159625.10|coiled-coil domain containing 135 	ENST00000394337.4|CCDC135|ENSG00000159625.10|coiled-coil domain containing 135 	ENST00000563126.1|CCDC135|ENSG00000159625.10|coiled-coil domain containing 135 	ENST00000336825.8|CCDC135|ENSG00000159625.10|coiled-coil domain containing 135
hg19_v2_chr16_+_58283814_58283918	56.9194	RFX3_RFX2	ENST00000443128.2|CCDC113|ENSG00000103021.5|coiled-coil domain containing 113 	ENST00000219299.4|CCDC113|ENSG00000103021.5|coiled-coil domain containing 113
hg19_v2_chr16_+_67840986_67841071	56.2645	RFX3_RFX2	ENST00000561639.1|TSNAXIP1|ENSG00000102904.10|translin-associated factor X interacting protein 1 	ENST00000567852.1|TSNAXIP1|ENSG00000102904.10|translin-associated factor X interacting protein 1 	ENST00000565148.1|TSNAXIP1|ENSG00000102904.10|translin-associated factor X interacting protein 1 	ENST00000388833.3|TSNAXIP1|ENSG00000102904.10|translin-associated factor X interacting protein 1 	ENST00000561654.1|TSNAXIP1|ENSG00000102904.10|translin-associated factor X interacting protein 1 	ENST00000431934.2|TSNAXIP1|ENSG00000102904.10|translin-associated factor X interacting protein 1
hg19_v2_chr10_+_63422695_63422755	55.1818	RFX3_RFX2	ENST00000330194.2|C10orf107|ENSG00000183346.6|chromosome 10 open reading frame 107 	ENST00000389639.3|C10orf107|ENSG00000183346.6|chromosome 10 open reading frame 107
hg19_v2_chr1_+_109656719_109656800	55.0885	RFX3_RFX2	ENST00000457623.2|KIAA1324|ENSG00000116299.12|KIAA1324 	ENST00000529753.1|KIAA1324|ENSG00000116299.12|KIAA1324
hg19_v2_chr16_+_67840668_67840832	54.9583	RFX3_RFX2	ENST00000415766.3|TSNAXIP1|ENSG00000102904.10|translin-associated factor X interacting protein 1
hg19_v2_chr1_-_67390474_67390570	54.8	RFX3_RFX2	ENST00000371023.3|WDR78|ENSG00000152763.12|WD repeat domain 78 	ENST00000371022.3|WDR78|ENSG00000152763.12|WD repeat domain 78 	ENST00000371026.3|WDR78|ENSG00000152763.12|WD repeat domain 78 	ENST00000431318.1|WDR78|ENSG00000152763.12|WD repeat domain 78
hg19_v2_chr6_-_165723088_165723119	54.5932	RFX3_RFX2	ENST00000230301.8|C6orf118|ENSG00000112539.10|chromosome 6 open reading frame 118
hg19_v2_chr1_+_111888890_111888915	53.8957	RFX3_RFX2	ENST00000369738.4|PIFO|ENSG00000173947.9|primary cilia formation
hg19_v2_chr1_+_111889212_111889269	53.596	RFX3_RFX2	ENST00000369737.4|PIFO|ENSG00000173947.9|primary cilia formation
hg19_v2_chr15_-_55790515_55790605	52.9317	RFX3_RFX2	ENST00000448430.2|DYX1C1|ENSG00000256061.3|dyslexia susceptibility 1 candidate 1 	ENST00000457155.2|DYX1C1|ENSG00000256061.3|dyslexia susceptibility 1 candidate 1
hg19_v2_chr3_-_107941209_107941227	52.8842	RFX3_RFX2	ENST00000492106.1|IFT57|ENSG00000114446.4|intraflagellar transport 57 homolog (Chlamydomonas)
hg19_v2_chr2_+_74648848_74648894	52.7159	RFX3_RFX2	ENST00000409791.1|WDR54|ENSG00000005448.12|WD repeat domain 54 	ENST00000426787.1|WDR54|ENSG00000005448.12|WD repeat domain 54 	ENST00000348227.4|WDR54|ENSG00000005448.12|WD repeat domain 54
hg19_v2_chr6_-_43478239_43478424	52.5531	RFX3_RFX2	ENST00000372441.1|LRRC73|ENSG00000204052.4|leucine rich repeat containing 73
hg19_v2_chr10_-_25305011_25305092	52.3792	RFX3_RFX2	ENST00000331161.4|ENKUR|ENSG00000151023.12|enkurin, TRPC channel interacting protein 	ENST00000376363.1|ENKUR|ENSG00000151023.12|enkurin, TRPC channel interacting protein
hg19_v2_chr6_+_52285046_52285124	52.2919	RFX3_RFX2	ENST00000371068.5|EFHC1|ENSG00000096093.10|EF-hand domain (C-terminal) containing 1
hg19_v2_chr14_+_74486043_74486072	51.9089	RFX3_RFX2	ENST00000464394.1|CCDC176|ENSG00000119636.11|coiled-coil domain containing 176 	ENST00000394009.3|CCDC176|ENSG00000119636.11|coiled-coil domain containing 176
hg19_v2_chr1_-_36915880_36916004	51.6227	RFX3_RFX2	ENST00000445843.3|OSCP1|ENSG00000116885.14|organic solute carrier partner 1
hg19_v2_chr13_+_31506818_31506853	51.5346	RFX3_RFX2	ENST00000380473.3|TEX26|ENSG00000175664.5|testis expressed 26
hg19_v2_chr7_+_76751926_76751960	51.3848	RFX3_RFX2	ENST00000285871.4|CCDC146|ENSG00000135205.10|coiled-coil domain containing 146 	ENST00000431197.1|CCDC146|ENSG00000135205.10|coiled-coil domain containing 146
hg19_v2_chr3_+_158288942_158288959	50.8565	RFX3_RFX2	ENST00000491767.1|MLF1|ENSG00000178053.13|myeloid leukemia factor 1 	ENST00000355893.5|MLF1|ENSG00000178053.13|myeloid leukemia factor 1
hg19_v2_chr16_-_30773372_30773449	50.2215	RFX3_RFX2	ENST00000545825.1|C16orf93|ENSG00000196118.7|chromosome 16 open reading frame 93 	ENST00000541260.1|C16orf93|ENSG00000196118.7|chromosome 16 open reading frame 93
hg19_v2_chr17_+_62075703_62075725	49.9024	RFX3_RFX2	ENST00000577953.1|C17orf72|ENSG00000224383.3|chromosome 17 open reading frame 72 	ENST00000582540.1|C17orf72|ENSG00000224383.3|chromosome 17 open reading frame 72 	ENST00000579184.1|C17orf72|ENSG00000224383.3|chromosome 17 open reading frame 72 	ENST00000425164.3|C17orf72|ENSG00000224383.3|chromosome 17 open reading frame 72 	ENST00000412177.1|C17orf72|ENSG00000224383.3|chromosome 17 open reading frame 72 	ENST00000539996.1|C17orf72|ENSG00000224383.3|chromosome 17 open reading frame 72 	ENST00000583891.1|C17orf72|ENSG00000224383.3|chromosome 17 open reading frame 72 	ENST00000580752.1|C17orf72|ENSG00000224383.3|chromosome 17 open reading frame 72
hg19_v2_chr3_+_158288960_158288990	49.6839	RFX3_RFX2	ENST00000484955.1|MLF1|ENSG00000178053.13|myeloid leukemia factor 1 	ENST00000359117.5|MLF1|ENSG00000178053.13|myeloid leukemia factor 1 	ENST00000498592.1|MLF1|ENSG00000178053.13|myeloid leukemia factor 1 	ENST00000477042.1|MLF1|ENSG00000178053.13|myeloid leukemia factor 1 	ENST00000471745.1|MLF1|ENSG00000178053.13|myeloid leukemia factor 1 	ENST00000469452.1|MLF1|ENSG00000178053.13|myeloid leukemia factor 1
hg19_v2_chr1_-_114301755_114301796	49.1793	RFX3_RFX2	ENST00000393357.2|PHTF1|ENSG00000116793.11|putative homeodomain transcription factor 1 	ENST00000369596.2|PHTF1|ENSG00000116793.11|putative homeodomain transcription factor 1 	ENST00000446739.1|PHTF1|ENSG00000116793.11|putative homeodomain transcription factor 1
hg19_v2_chr12_-_58329888_58329970	49.15	RFX3_RFX2	ENST00000546580.1|RP11-620J15.3|ENSG00000257698.1|RP11-620J15.3
hg19_v2_chr1_+_161068179_161068209	48.8138	RFX3_RFX2	ENST00000368011.4|KLHDC9|ENSG00000162755.9|kelch domain containing 9 	ENST00000392192.2|KLHDC9|ENSG00000162755.9|kelch domain containing 9
hg19_v2_chr15_-_68497657_68497899	48.2939	RFX3_RFX2	ENST00000448060.2|CALML4|ENSG00000129007.10|calmodulin-like 4 	ENST00000467889.1|CALML4|ENSG00000129007.10|calmodulin-like 4
hg19_v2_chr1_+_245133278_245133293	47.8638	RFX3_RFX2	ENST00000366522.2|EFCAB2|ENSG00000203666.8|EF-hand calcium binding domain 2
hg19_v2_chr7_-_100965011_100965108	47.8231	RFX3_RFX2	ENST00000498704.2|RABL5|ENSG00000128581.11|RAB, member RAS oncogene family-like 5 	ENST00000517481.1|RABL5|ENSG00000128581.11|RAB, member RAS oncogene family-like 5 	ENST00000437644.2|RABL5|ENSG00000128581.11|RAB, member RAS oncogene family-like 5 	ENST00000315322.4|RABL5|ENSG00000128581.11|RAB, member RAS oncogene family-like 5
hg19_v2_chr17_+_7761301_7761396	47.1522	RFX3_RFX2	ENST00000332439.4|CYB5D1|ENSG00000182224.7|cytochrome b5 domain containing 1 	ENST00000570446.1|CYB5D1|ENSG00000182224.7|cytochrome b5 domain containing 1
hg19_v2_chr9_+_135754263_135754338	46.5531	RFX3_RFX2	ENST00000356311.5|C9orf9|ENSG00000165698.11|chromosome 9 open reading frame 9 	ENST00000350499.6|C9orf9|ENSG00000165698.11|chromosome 9 open reading frame 9
hg19_v2_chr10_+_22634384_22634456	46.4131	RFX3_RFX2	ENST00000376624.3|SPAG6|ENSG00000077327.11|sperm associated antigen 6 	ENST00000376603.2|SPAG6|ENSG00000077327.11|sperm associated antigen 6 	ENST00000376601.1|SPAG6|ENSG00000077327.11|sperm associated antigen 6 	ENST00000538630.1|SPAG6|ENSG00000077327.11|sperm associated antigen 6 	ENST00000456231.2|SPAG6|ENSG00000077327.11|sperm associated antigen 6 	ENST00000313311.6|SPAG6|ENSG00000077327.11|sperm associated antigen 6 	ENST00000435326.1|SPAG6|ENSG00000077327.11|sperm associated antigen 6
hg19_v2_chr6_+_109169591_109169660	46.3201	RFX3_RFX2	ENST00000368972.3|ARMC2|ENSG00000118690.8|armadillo repeat containing 2 	ENST00000392644.4|ARMC2|ENSG00000118690.8|armadillo repeat containing 2
hg19_v2_chr11_+_61276214_61276272	46.2534	RFX3_RFX2	ENST00000378075.2|LRRC10B|ENSG00000204950.2|leucine rich repeat containing 10B
hg19_v2_chr1_+_109656579_109656623	45.8748	RFX3_RFX2	ENST00000526264.1|KIAA1324|ENSG00000116299.12|KIAA1324 	ENST00000369939.3|KIAA1324|ENSG00000116299.12|KIAA1324
hg19_v2_chr1_-_36916011_36916057	45.7732	RFX3_RFX2	ENST00000356637.5|OSCP1|ENSG00000116885.14|organic solute carrier partner 1 	ENST00000354267.3|OSCP1|ENSG00000116885.14|organic solute carrier partner 1 	ENST00000235532.5|OSCP1|ENSG00000116885.14|organic solute carrier partner 1
hg19_v2_chr7_+_138818490_138818541	45.6607	RFX3_RFX2	ENST00000430935.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000495038.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000474035.2|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000478836.2|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000464848.1|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26 	ENST00000343187.4|TTC26|ENSG00000105948.9|tetratricopeptide repeat domain 26
hg19_v2_chr2_+_39103103_39103209	44.9637	RFX3_RFX2	ENST00000340556.6|MORN2|ENSG00000188010.8|MORN repeat containing 2 	ENST00000410014.1|MORN2|ENSG00000188010.8|MORN repeat containing 2 	ENST00000409665.1|MORN2|ENSG00000188010.8|MORN repeat containing 2 	ENST00000409077.2|MORN2|ENSG00000188010.8|MORN repeat containing 2 	ENST00000409131.2|MORN2|ENSG00000188010.8|MORN repeat containing 2
hg19_v2_chr17_+_260097_260196	44.7709	RFX3_RFX2	ENST00000360127.6|C17orf97|ENSG00000187624.7|chromosome 17 open reading frame 97 	ENST00000571106.1|C17orf97|ENSG00000187624.7|chromosome 17 open reading frame 97 	ENST00000491373.1|C17orf97|ENSG00000187624.7|chromosome 17 open reading frame 97
hg19_v2_chr11_-_8615720_8615836	44.7597	RFX3_RFX2	ENST00000358872.3|STK33|ENSG00000130413.11|serine/threonine kinase 33 	ENST00000454443.2|STK33|ENSG00000130413.11|serine/threonine kinase 33
hg19_v2_chr11_-_8615488_8615505	44.3537	RFX3_RFX2	ENST00000315204.1|STK33|ENSG00000130413.11|serine/threonine kinase 33 	ENST00000396672.1|STK33|ENSG00000130413.11|serine/threonine kinase 33 	ENST00000396673.1|STK33|ENSG00000130413.11|serine/threonine kinase 33
hg19_v2_chr3_+_158288999_158289050	44.0095	RFX3_RFX2	ENST00000482628.1|MLF1|ENSG00000178053.13|myeloid leukemia factor 1 	ENST00000478894.2|MLF1|ENSG00000178053.13|myeloid leukemia factor 1 	ENST00000392822.3|MLF1|ENSG00000178053.13|myeloid leukemia factor 1 	ENST00000466246.1|MLF1|ENSG00000178053.13|myeloid leukemia factor 1
hg19_v2_chr3_+_97483572_97483644	43.5656	RFX3_RFX2	ENST00000335979.2|ARL6|ENSG00000113966.5|ADP-ribosylation factor-like 6 	ENST00000394206.1|ARL6|ENSG00000113966.5|ADP-ribosylation factor-like 6
hg19_v2_chr3_-_129147432_129147494	42.74	RFX3_RFX2	ENST00000503957.1|EFCAB12|ENSG00000172771.7|EF-hand calcium binding domain 12 	ENST00000505956.1|EFCAB12|ENSG00000172771.7|EF-hand calcium binding domain 12 	ENST00000326085.3|EFCAB12|ENSG00000172771.7|EF-hand calcium binding domain 12
hg19_v2_chr1_-_118727781_118727859	42.0969	RFX3_RFX2	ENST00000336338.5|SPAG17|ENSG00000155761.9|sperm associated antigen 17
hg19_v2_chr19_-_55677999_55678026	41.9256	RFX3_RFX2	ENST00000532817.1|DNAAF3|ENSG00000167646.9|dynein, axonemal, assembly factor 3 	ENST00000527223.2|DNAAF3|ENSG00000167646.9|dynein, axonemal, assembly factor 3 	ENST00000391720.4|DNAAF3|ENSG00000167646.9|dynein, axonemal, assembly factor 3
hg19_v2_chr3_+_97483366_97483422	41.7837	RFX3_RFX2	ENST00000463745.1|ARL6|ENSG00000113966.5|ADP-ribosylation factor-like 6 	ENST00000462412.1|ARL6|ENSG00000113966.5|ADP-ribosylation factor-like 6
hg19_v2_chr12_+_122356488_122356522	41.7688	RFX3_RFX2	ENST00000397454.2|WDR66|ENSG00000158023.5|WD repeat domain 66
hg19_v2_chr19_-_55677920_55677989	41.5613	RFX3_RFX2	ENST00000524407.2|DNAAF3|ENSG00000167646.9|dynein, axonemal, assembly factor 3 	ENST00000526003.1|DNAAF3|ENSG00000167646.9|dynein, axonemal, assembly factor 3 	ENST00000534170.1|DNAAF3|ENSG00000167646.9|dynein, axonemal, assembly factor 3
hg19_v2_chrX_+_119030118_119030179	41.0837	RFX3_RFX2	ENST00000371422.1|AKAP14|ENSG00000186471.8|A kinase (PRKA) anchor protein 14 	ENST00000334356.2|AKAP14|ENSG00000186471.8|A kinase (PRKA) anchor protein 14
hg19_v2_chr1_-_48937838_48937905	40.8303	RFX3_RFX2	ENST00000371847.3|SPATA6|ENSG00000132122.7|spermatogenesis associated 6
hg19_v2_chr22_-_38349552_38349676	40.6448	RFX3_RFX2	ENST00000422191.1|C22orf23|ENSG00000128346.6|chromosome 22 open reading frame 23 	ENST00000249079.2|C22orf23|ENSG00000128346.6|chromosome 22 open reading frame 23 	ENST00000418863.1|C22orf23|ENSG00000128346.6|chromosome 22 open reading frame 23 	ENST00000403305.1|C22orf23|ENSG00000128346.6|chromosome 22 open reading frame 23 	ENST00000403026.1|C22orf23|ENSG00000128346.6|chromosome 22 open reading frame 23
hg19_v2_chr1_-_114302086_114302174	40.4663	RFX3_RFX2	ENST00000369604.1|PHTF1|ENSG00000116793.11|putative homeodomain transcription factor 1 	ENST00000357783.2|PHTF1|ENSG00000116793.11|putative homeodomain transcription factor 1
hg19_v2_chr3_-_57530051_57530090	40.4303	RFX3_RFX2	ENST00000311202.6|DNAH12|ENSG00000174844.10|dynein, axonemal, heavy chain 12 	ENST00000351747.2|DNAH12|ENSG00000174844.10|dynein, axonemal, heavy chain 12 	ENST00000495027.1|DNAH12|ENSG00000174844.10|dynein, axonemal, heavy chain 12 	ENST00000389536.4|DNAH12|ENSG00000174844.10|dynein, axonemal, heavy chain 12
hg19_v2_chr14_+_100259666_100259685	40.2861	RFX3_RFX2	ENST00000262233.6|EML1|ENSG00000066629.12|echinoderm microtubule associated protein like 1 	ENST00000334192.4|EML1|ENSG00000066629.12|echinoderm microtubule associated protein like 1
hg19_v2_chr2_+_170335924_170336039	40.2148	RFX3_RFX2	ENST00000554017.1|BBS5|ENSG00000163093.7|Bardet-Biedl syndrome 5 	ENST00000513963.1|RP11-724O16.1|ENSG00000251569.1|Bardet-Biedl syndrome 5 protein; Uncharacterized protein  	ENST00000392663.2|BBS5|ENSG00000163093.7|Bardet-Biedl syndrome 5
hg19_v2_chr1_-_114301960_114302080	40.0077	RFX3_RFX2	ENST00000369598.1|PHTF1|ENSG00000116793.11|putative homeodomain transcription factor 1 	ENST00000369600.1|PHTF1|ENSG00000116793.11|putative homeodomain transcription factor 1
hg19_v2_chr3_-_47324079_47324107	39.8885	RFX3_RFX2	ENST00000352910.4|KIF9|ENSG00000088727.8|kinesin family member 9
hg19_v2_chr8_-_133687813_133687844	39.7977	RFX3_RFX2	ENST00000250173.1|LRRC6|ENSG00000129295.4|leucine rich repeat containing 6 	ENST00000519595.1|LRRC6|ENSG00000129295.4|leucine rich repeat containing 6
hg19_v2_chrX_+_119029800_119029936	39.3523	RFX3_RFX2	ENST00000371431.3|AKAP14|ENSG00000186471.8|A kinase (PRKA) anchor protein 14 	ENST00000371423.2|AKAP14|ENSG00000186471.8|A kinase (PRKA) anchor protein 14 	ENST00000371425.4|AKAP14|ENSG00000186471.8|A kinase (PRKA) anchor protein 14 	ENST00000394594.2|AKAP14|ENSG00000186471.8|A kinase (PRKA) anchor protein 14
hg19_v2_chr3_-_47324242_47324337	38.3691	RFX3_RFX2	ENST00000456548.1|KIF9|ENSG00000088727.8|kinesin family member 9 	ENST00000432493.1|KIF9|ENSG00000088727.8|kinesin family member 9 	ENST00000335044.2|KIF9|ENSG00000088727.8|kinesin family member 9 	ENST00000444589.2|KIF9|ENSG00000088727.8|kinesin family member 9
hg19_v2_chr7_-_102715263_102715289	38.0032	RFX3_RFX2	ENST00000379305.3|FBXL13|ENSG00000161040.12|F-box and leucine-rich repeat protein 13
hg19_v2_chr18_+_44526786_44526818	37.9006	RFX3_RFX2	ENST00000245121.5|KATNAL2|ENSG00000167216.12|katanin p60 subunit A-like 2 	ENST00000356157.7|KATNAL2|ENSG00000167216.12|katanin p60 subunit A-like 2
hg19_v2_chr1_+_20512568_20512629	37.6793	RFX3_RFX2	ENST00000375099.3|UBXN10|ENSG00000162543.5|UBX domain protein 10
hg19_v2_chr17_+_11501748_11501806	37.6103	RFX3_RFX2	ENST00000262442.4|DNAH9|ENSG00000007174.13|dynein, axonemal, heavy chain 9 	ENST00000579828.1|DNAH9|ENSG00000007174.13|dynein, axonemal, heavy chain 9
hg19_v2_chr7_-_102715172_102715258	37.5722	RFX3_RFX2	ENST00000456695.1|FBXL13|ENSG00000161040.12|F-box and leucine-rich repeat protein 13 	ENST00000455112.2|FBXL13|ENSG00000161040.12|F-box and leucine-rich repeat protein 13 	ENST00000440067.1|FBXL13|ENSG00000161040.12|F-box and leucine-rich repeat protein 13
hg19_v2_chr2_+_120301997_120302038	37.4476	RFX3_RFX2	ENST00000602047.1|PCDP1|ENSG00000163075.8|Primary ciliary dyskinesia protein 1
hg19_v2_chr2_+_120302041_120302052	37.2716	RFX3_RFX2	ENST00000442513.3|PCDP1|ENSG00000163075.8|Primary ciliary dyskinesia protein 1  	ENST00000413369.3|PCDP1|ENSG00000163075.8|Primary ciliary dyskinesia protein 1
hg19_v2_chr11_-_62473706_62473775	37.0494	RFX3_RFX2	ENST00000403550.1|BSCL2|ENSG00000168000.10|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg19_v2_chr3_-_107941230_107941417	37.0237	RFX3_RFX2	ENST00000264538.3|IFT57|ENSG00000114446.4|intraflagellar transport 57 homolog (Chlamydomonas)
hg19_v2_chr1_-_173638976_173639007	36.8267	RFX3_RFX2	ENST00000333279.2|ANKRD45|ENSG00000183831.6|ankyrin repeat domain 45
hg19_v2_chr8_-_133687778_133687810	36.7275	RFX3_RFX2	ENST00000518642.1|LRRC6|ENSG00000129295.4|leucine rich repeat containing 6
hg19_v2_chr19_-_7990991_7991059	36.3256	RFX3_RFX2	ENST00000318978.4|CTXN1|ENSG00000178531.4|cortexin 1
hg19_v2_chr3_-_47324008_47324026	35.5833	RFX3_RFX2	ENST00000425853.1|KIF9|ENSG00000088727.8|kinesin family member 9
hg19_v2_chr3_-_196439065_196439167	35.1789	RFX3_RFX2	ENST00000399942.4|CEP19|ENSG00000174007.7|centrosomal protein 19kDa 	ENST00000409690.3|CEP19|ENSG00000174007.7|centrosomal protein 19kDa
hg19_v2_chr16_+_57406368_57406392	34.3146	RFX3_RFX2	ENST00000006053.6|CX3CL1|ENSG00000006210.6|chemokine (C-X3-C motif) ligand 1 	ENST00000563383.1|CX3CL1|ENSG00000006210.6|chemokine (C-X3-C motif) ligand 1
hg19_v2_chr17_-_56406117_56406165	34.2532	RFX3_RFX2	ENST00000268893.6|BZRAP1|ENSG00000005379.11|benzodiazepine receptor (peripheral) associated protein 1 	ENST00000355701.3|BZRAP1|ENSG00000005379.11|benzodiazepine receptor (peripheral) associated protein 1
hg19_v2_chr16_+_4784458_4784497	34.0848	RFX3_RFX2	ENST00000590191.1|C16orf71|ENSG00000166246.9|chromosome 16 open reading frame 71
hg19_v2_chr18_+_77905894_77905938	33.8172	RFX3_RFX2	ENST00000589574.1|AC139100.2|ENSG00000267270.1|Uncharacterized protein  	ENST00000588226.1|AC139100.2|ENSG00000267270.1|Uncharacterized protein  	ENST00000585422.1|AC139100.2|ENSG00000267270.1|Uncharacterized protein
hg19_v2_chr1_-_114301503_114301576	33.7469	RFX3_RFX2	ENST00000447664.2|PHTF1|ENSG00000116793.11|putative homeodomain transcription factor 1
hg19_v2_chr9_-_117111222_117111258	33.3896	RFX3_RFX2	ENST00000374079.4|AKNA|ENSG00000106948.12|AT-hook transcription factor
hg19_v2_chr18_-_71815051_71815100	33.2902	RFX3_RFX2	ENST00000582526.1|FBXO15|ENSG00000141665.7|F-box protein 15 	ENST00000419743.2|FBXO15|ENSG00000141665.7|F-box protein 15
hg19_v2_chr3_-_19975665_19975719	33.2889	RFX3_RFX2	ENST00000295824.9|EFHB|ENSG00000163576.13|EF-hand domain family, member B 	ENST00000389256.4|EFHB|ENSG00000163576.13|EF-hand domain family, member B
hg19_v2_chr18_-_71814999_71815043	33.0594	RFX3_RFX2	ENST00000269500.5|FBXO15|ENSG00000141665.7|F-box protein 15
hg19_v2_chr18_-_47792851_47792911	32.9743	RFX3_RFX2	ENST00000398545.4|CCDC11|ENSG00000172361.5|coiled-coil domain containing 11
hg19_v2_chr2_-_178483694_178483694	32.4655	RFX3_RFX2	ENST00000355689.5|TTC30A|ENSG00000197557.6|tetratricopeptide repeat domain 30A
hg19_v2_chr22_-_38240412_38240438	32.0278	RFX3_RFX2	ENST00000215941.4|ANKRD54|ENSG00000100124.8|ankyrin repeat domain 54
hg19_v2_chr8_+_144798429_144798561	31.029	RFX3_RFX2	ENST00000338033.4|MAPK15|ENSG00000181085.10|mitogen-activated protein kinase 15 	ENST00000395107.4|MAPK15|ENSG00000181085.10|mitogen-activated protein kinase 15 	ENST00000395108.2|MAPK15|ENSG00000181085.10|mitogen-activated protein kinase 15
hg19_v2_chr1_+_183605200_183605220	31.0067	RFX3_RFX2	ENST00000304685.4|RGL1|ENSG00000143344.11|ral guanine nucleotide dissociation stimulator-like 1
hg19_v2_chr20_+_43160458_43160598	30.983	RFX3_RFX2	ENST00000372889.1|PKIG|ENSG00000168734.9|protein kinase (cAMP-dependent, catalytic) inhibitor gamma 	ENST00000372887.1|PKIG|ENSG00000168734.9|protein kinase (cAMP-dependent, catalytic) inhibitor gamma 	ENST00000372882.3|PKIG|ENSG00000168734.9|protein kinase (cAMP-dependent, catalytic) inhibitor gamma
hg19_v2_chr11_-_62473776_62473816	30.9063	RFX3_RFX2	ENST00000278893.7|BSCL2|ENSG00000168000.10|Berardinelli-Seip congenital lipodystrophy 2 (seipin) 	ENST00000407022.3|BSCL2|ENSG00000168000.10|Berardinelli-Seip congenital lipodystrophy 2 (seipin) 	ENST00000421906.1|BSCL2|ENSG00000168000.10|Berardinelli-Seip congenital lipodystrophy 2 (seipin)
hg19_v2_chr2_-_230579185_230579302	30.7595	RFX3_RFX2	ENST00000341772.4|DNER|ENSG00000187957.7|delta/notch-like EGF repeat containing
hg19_v2_chr20_+_43160409_43160426	30.5335	RFX3_RFX2	ENST00000372894.3|PKIG|ENSG00000168734.9|protein kinase (cAMP-dependent, catalytic) inhibitor gamma 	ENST00000372892.3|PKIG|ENSG00000168734.9|protein kinase (cAMP-dependent, catalytic) inhibitor gamma 	ENST00000372891.3|PKIG|ENSG00000168734.9|protein kinase (cAMP-dependent, catalytic) inhibitor gamma
hg19_v2_chr3_-_113160334_113160457	29.8329	RFX3_RFX2	ENST00000393845.2|WDR52|ENSG00000206530.4|WD repeat domain 52 	ENST00000295868.2|WDR52|ENSG00000206530.4|WD repeat domain 52
hg19_v2_chr2_-_241497374_241497389	29.3103	RFX3_RFX2	ENST00000373318.2|ANKMY1|ENSG00000144504.11|ankyrin repeat and MYND domain containing 1 	ENST00000406958.1|ANKMY1|ENSG00000144504.11|ankyrin repeat and MYND domain containing 1 	ENST00000391987.1|ANKMY1|ENSG00000144504.11|ankyrin repeat and MYND domain containing 1 	ENST00000373320.4|ANKMY1|ENSG00000144504.11|ankyrin repeat and MYND domain containing 1
hg19_v2_chr4_+_40751914_40751995	29.1979	RFX3_RFX2	ENST00000381782.2|NSUN7|ENSG00000179299.12|NOP2/Sun domain family, member 7 	ENST00000316607.5|NSUN7|ENSG00000179299.12|NOP2/Sun domain family, member 7
hg19_v2_chr3_-_47324060_47324074	29.1401	RFX3_RFX2	ENST00000452770.2|KIF9|ENSG00000088727.8|kinesin family member 9
hg19_v2_chr22_+_39052632_39052692	29.1349	RFX3_RFX2	ENST00000411557.1|CBY1|ENSG00000100211.6|chibby homolog 1 (Drosophila) 	ENST00000396811.2|CBY1|ENSG00000100211.6|chibby homolog 1 (Drosophila) 	ENST00000216029.3|CBY1|ENSG00000100211.6|chibby homolog 1 (Drosophila) 	ENST00000416285.1|CBY1|ENSG00000100211.6|chibby homolog 1 (Drosophila)
hg19_v2_chr12_+_6930964_6931034	29.0894	RFX3_RFX2	ENST00000382315.3|GPR162|ENSG00000250510.3|G protein-coupled receptor 162
hg19_v2_chr1_+_63989004_63989077	28.9833	RFX3_RFX2	ENST00000371088.4|EFCAB7|ENSG00000203965.8|EF-hand calcium binding domain 7
hg19_v2_chr21_-_40817645_40817729	28.7681	RFX3_RFX2	ENST00000438404.1|LCA5L|ENSG00000157578.9|Leber congenital amaurosis 5-like 	ENST00000358268.2|LCA5L|ENSG00000157578.9|Leber congenital amaurosis 5-like 	ENST00000411566.1|LCA5L|ENSG00000157578.9|Leber congenital amaurosis 5-like 	ENST00000451131.1|LCA5L|ENSG00000157578.9|Leber congenital amaurosis 5-like 	ENST00000418018.1|LCA5L|ENSG00000157578.9|Leber congenital amaurosis 5-like 	ENST00000415863.1|LCA5L|ENSG00000157578.9|Leber congenital amaurosis 5-like 	ENST00000426783.1|LCA5L|ENSG00000157578.9|Leber congenital amaurosis 5-like 	ENST00000288350.3|LCA5L|ENSG00000157578.9|Leber congenital amaurosis 5-like 	ENST00000485895.2|LCA5L|ENSG00000157578.9|Leber congenital amaurosis 5-like 	ENST00000448288.2|LCA5L|ENSG00000157578.9|Leber congenital amaurosis 5-like 	ENST00000456017.1|LCA5L|ENSG00000157578.9|Leber congenital amaurosis 5-like 	ENST00000434281.1|LCA5L|ENSG00000157578.9|Leber congenital amaurosis 5-like
hg19_v2_chr3_-_27410847_27410951	28.3563	RFX3_RFX2	ENST00000429845.2|NEK10|ENSG00000163491.12|NIMA-related kinase 10 	ENST00000341435.5|NEK10|ENSG00000163491.12|NIMA-related kinase 10 	ENST00000435750.1|NEK10|ENSG00000163491.12|NIMA-related kinase 10
hg19_v2_chr5_-_54529415_54529508	28.2193	RFX3_RFX2	ENST00000282572.4|CCNO|ENSG00000152669.8|cyclin O
hg19_v2_chr3_+_119421849_119421962	28.1905	RFX3_RFX2	ENST00000273390.5|MAATS1|ENSG00000183833.12|MYCBP-associated, testis expressed 1 	ENST00000463700.1|MAATS1|ENSG00000183833.12|MYCBP-associated, testis expressed 1
hg19_v2_chr15_+_67547163_67547193	28.0897	RFX3_RFX2	ENST00000335894.4|IQCH|ENSG00000103599.15|IQ motif containing H
hg19_v2_chr11_+_111807863_111807937	27.7155	RFX3_RFX2	ENST00000440460.2|DIXDC1|ENSG00000150764.9|DIX domain containing 1
hg19_v2_chr9_-_135754164_135754210	27.6216	RFX3_RFX2	ENST00000298545.3|AK8|ENSG00000165695.5|adenylate kinase 8
hg19_v2_chr9_+_100069933_100069954	27.5948	RFX3_RFX2	ENST00000529487.1|CCDC180|ENSG00000197816.9|coiled-coil domain containing 180
hg19_v2_chr1_-_48937821_48937832	27.578	RFX3_RFX2	ENST00000396199.3|SPATA6|ENSG00000132122.7|spermatogenesis associated 6
hg19_v2_chr21_-_34185944_34185969	27.5544	RFX3_RFX2	ENST00000479548.1|C21orf62|ENSG00000205929.5|chromosome 21 open reading frame 62
hg19_v2_chr1_-_24740207_24740283	27.5444	RFX3_RFX2	ENST00000003583.8|STPG1|ENSG00000001460.13|sperm-tail PG-rich repeat containing 1 	ENST00000337248.4|STPG1|ENSG00000001460.13|sperm-tail PG-rich repeat containing 1
hg19_v2_chr22_-_31063782_31063879	27.4257	RFX3_RFX2	ENST00000404885.1|DUSP18|ENSG00000167065.9|dual specificity phosphatase 18 	ENST00000403268.1|DUSP18|ENSG00000167065.9|dual specificity phosphatase 18 	ENST00000407308.1|DUSP18|ENSG00000167065.9|dual specificity phosphatase 18 	ENST00000342474.4|DUSP18|ENSG00000167065.9|dual specificity phosphatase 18 	ENST00000334679.3|DUSP18|ENSG00000167065.9|dual specificity phosphatase 18
hg19_v2_chr3_-_113775328_113775460	27.4044	RFX3_RFX2	ENST00000483766.1|KIAA1407|ENSG00000163617.6|KIAA1407 	ENST00000545063.1|KIAA1407|ENSG00000163617.6|KIAA1407 	ENST00000491000.1|KIAA1407|ENSG00000163617.6|KIAA1407 	ENST00000295878.3|KIAA1407|ENSG00000163617.6|KIAA1407
hg19_v2_chr10_+_104178946_104179000	27.3478	RFX3_RFX2	ENST00000432590.1|FBXL15|ENSG00000107872.8|F-box and leucine-rich repeat protein 15
hg19_v2_chr16_+_3550924_3551020	26.8491	RFX3_RFX2	ENST00000576634.1|CLUAP1|ENSG00000103351.8|clusterin associated protein 1 	ENST00000574369.1|CLUAP1|ENSG00000103351.8|clusterin associated protein 1 	ENST00000341633.5|CLUAP1|ENSG00000103351.8|clusterin associated protein 1 	ENST00000417763.2|CLUAP1|ENSG00000103351.8|clusterin associated protein 1 	ENST00000571025.1|CLUAP1|ENSG00000103351.8|clusterin associated protein 1
hg19_v2_chr2_-_178417742_178417742	26.8411	RFX3_RFX2	ENST00000408939.3|TTC30B|ENSG00000196659.9|tetratricopeptide repeat domain 30B
hg19_v2_chr1_-_169337176_169337205	26.8391	RFX3_RFX2	ENST00000472647.1|NME7|ENSG00000143156.9|NME/NM23 family member 7 	ENST00000367811.3|NME7|ENSG00000143156.9|NME/NM23 family member 7
hg19_v2_chr2_+_159651821_159651836	26.5124	RFX3_RFX2	ENST00000309950.3|DAPL1|ENSG00000163331.6|death associated protein-like 1 	ENST00000409042.1|DAPL1|ENSG00000163331.6|death associated protein-like 1
hg19_v2_chr7_+_133812052_133812122	26.4267	RFX3_RFX2	ENST00000285928.2|LRGUK|ENSG00000155530.2|leucine-rich repeats and guanylate kinase domain containing
hg19_v2_chr13_+_37005967_37006056	26.3865	RFX3_RFX2	ENST00000440264.1|CCNA1|ENSG00000133101.5|cyclin A1 	ENST00000449823.1|CCNA1|ENSG00000133101.5|cyclin A1
hg19_v2_chr10_+_127585093_127585114	26.2135	RFX3_RFX2	ENST00000368695.1|FANK1|ENSG00000203780.6|fibronectin type III and ankyrin repeat domains 1 	ENST00000368693.1|FANK1|ENSG00000203780.6|fibronectin type III and ankyrin repeat domains 1
hg19_v2_chr16_-_67450325_67450406	25.847	RFX3_RFX2	ENST00000348579.2|ZDHHC1|ENSG00000159714.6|zinc finger, DHHC-type containing 1
hg19_v2_chr12_-_63328817_63328870	25.7911	RFX3_RFX2	ENST00000228705.6|PPM1H|ENSG00000111110.7|protein phosphatase, Mg2+/Mn2+ dependent, 1H
hg19_v2_chr11_+_537494_537537	25.4478	RFX3_RFX2	ENST00000270115.7|LRRC56|ENSG00000161328.10|leucine rich repeat containing 56
hg19_v2_chr11_-_8615687_8615711	25.315	RFX3_RFX2	ENST00000534493.1|STK33|ENSG00000130413.11|serine/threonine kinase 33 	ENST00000422559.2|STK33|ENSG00000130413.11|serine/threonine kinase 33
hg19_v2_chr19_-_50529193_50529381	25.2872	RFX3_RFX2	ENST00000596445.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000599538.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3
hg19_v2_chr9_-_131418944_131419066	25.0702	RFX3_RFX2	ENST00000419989.1|WDR34|ENSG00000119333.7|WD repeat domain 34 	ENST00000451652.1|WDR34|ENSG00000119333.7|WD repeat domain 34 	ENST00000372715.2|WDR34|ENSG00000119333.7|WD repeat domain 34
hg19_v2_chr7_+_102073966_102074072	25.0605	RFX3_RFX2	ENST00000495936.1|ORAI2|ENSG00000160991.11|ORAI calcium release-activated calcium modulator 2 	ENST00000356387.2|ORAI2|ENSG00000160991.11|ORAI calcium release-activated calcium modulator 2 	ENST00000478730.2|ORAI2|ENSG00000160991.11|ORAI calcium release-activated calcium modulator 2 	ENST00000468241.1|ORAI2|ENSG00000160991.11|ORAI calcium release-activated calcium modulator 2 	ENST00000403646.3|ORAI2|ENSG00000160991.11|ORAI calcium release-activated calcium modulator 2
hg19_v2_chr11_-_75379479_75379606	24.6631	RFX3_RFX2	ENST00000434603.2|MAP6|ENSG00000171533.7|microtubule-associated protein 6
hg19_v2_chr10_-_75118611_75118626	24.4336	RFX3_RFX2	ENST00000355577.3|TTC18|ENSG00000156042.13|tetratricopeptide repeat domain 18 	ENST00000394865.1|TTC18|ENSG00000156042.13|tetratricopeptide repeat domain 18 	ENST00000310715.3|TTC18|ENSG00000156042.13|tetratricopeptide repeat domain 18 	ENST00000401621.2|TTC18|ENSG00000156042.13|tetratricopeptide repeat domain 18
hg19_v2_chr11_-_119252359_119252421	24.2452	RFX3_RFX2	ENST00000455332.2|USP2|ENSG00000036672.11|ubiquitin specific peptidase 2
hg19_v2_chr10_-_75118471_75118536	24.2429	RFX3_RFX2	ENST00000340329.3|TTC18|ENSG00000156042.13|tetratricopeptide repeat domain 18
hg19_v2_chr3_-_196045127_196045164	24.1648	RFX3_RFX2	ENST00000325318.5|TCTEX1D2|ENSG00000213123.6|Tctex1 domain containing 2
hg19_v2_chr7_+_129142320_129142354	24.1235	RFX3_RFX2	ENST00000462322.2|SMKR1|ENSG00000240204.2|small lysine-rich protein 1
hg19_v2_chr19_+_10527449_10527619	24.0673	RFX3_RFX2	ENST00000592685.1|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific 	ENST00000380702.2|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific
hg19_v2_chr1_-_48937682_48937699	24.0635	RFX3_RFX2	ENST00000371843.3|SPATA6|ENSG00000132122.7|spermatogenesis associated 6
hg19_v2_chr6_+_109761898_109761966	23.9682	RFX3_RFX2	ENST00000258052.3|SMPD2|ENSG00000135587.4|sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)
hg19_v2_chr19_+_35630926_35631009	23.8986	RFX3_RFX2	ENST00000588081.1|FXYD1|ENSG00000266964.1|FXYD domain containing ion transport regulator 1 	ENST00000589121.1|FXYD1|ENSG00000266964.1|FXYD domain containing ion transport regulator 1
hg19_v2_chr19_-_41870026_41870078	23.5289	RFX3_RFX2	ENST00000243578.3|B9D2|ENSG00000123810.3|B9 protein domain 2
hg19_v2_chr10_+_134973905_134973977	23.4273	RFX3_RFX2	ENST00000304613.3|KNDC1|ENSG00000171798.13|kinase non-catalytic C-lobe domain (KIND) containing 1 	ENST00000368572.2|KNDC1|ENSG00000171798.13|kinase non-catalytic C-lobe domain (KIND) containing 1
hg19_v2_chr9_+_127615733_127615756	23.3265	RFX3_RFX2	ENST00000373574.1|WDR38|ENSG00000136918.3|WD repeat domain 38
hg19_v2_chr11_+_120894781_120894840	23.3103	RFX3_RFX2	ENST00000529397.1|TBCEL|ENSG00000154114.8|tubulin folding cofactor E-like 	ENST00000528512.1|TBCEL|ENSG00000154114.8|tubulin folding cofactor E-like 	ENST00000422003.2|TBCEL|ENSG00000154114.8|tubulin folding cofactor E-like
hg19_v2_chr19_+_35630628_35630642	23.2825	RFX3_RFX2	ENST00000588715.1|FXYD1|ENSG00000266964.1|FXYD domain containing ion transport regulator 1 	ENST00000588607.1|FXYD1|ENSG00000266964.1|FXYD domain containing ion transport regulator 1
hg19_v2_chr19_+_35630022_35630083	23.2599	RFX3_RFX2	ENST00000589209.1|FXYD1|ENSG00000266964.1|FXYD domain containing ion transport regulator 1
hg19_v2_chr11_+_17298255_17298296	23.2274	RFX3_RFX2	ENST00000531172.1|NUCB2|ENSG00000070081.11|nucleobindin 2 	ENST00000533738.2|NUCB2|ENSG00000070081.11|nucleobindin 2 	ENST00000323688.6|NUCB2|ENSG00000070081.11|nucleobindin 2
hg19_v2_chr5_-_132073111_132073205	23.0791	RFX3_RFX2	ENST00000403231.1|KIF3A|ENSG00000131437.11|kinesin family member 3A
hg19_v2_chr11_-_119252425_119252436	23.0599	RFX3_RFX2	ENST00000260187.2|USP2|ENSG00000036672.11|ubiquitin specific peptidase 2
hg19_v2_chr7_-_130080977_130081078	22.6933	RFX3_RFX2	ENST00000223208.5|CEP41|ENSG00000106477.14|centrosomal protein 41kDa
hg19_v2_chr7_+_30811004_30811058	22.6664	RFX3_RFX2	ENST00000265299.6|FAM188B|ENSG00000106125.14|family with sequence similarity 188, member B
hg19_v2_chr11_+_17298297_17298341	22.647	RFX3_RFX2	ENST00000529010.1|NUCB2|ENSG00000070081.11|nucleobindin 2
hg19_v2_chr11_+_71791359_71791387	22.3309	RFX3_RFX2	ENST00000419228.1|LRTOMT|ENSG00000184154.8|leucine rich transmembrane and O-methyltransferase domain containing 	ENST00000435085.1|LRTOMT|ENSG00000184154.8|leucine rich transmembrane and O-methyltransferase domain containing 	ENST00000307198.7|LRTOMT|ENSG00000184154.8|leucine rich transmembrane and O-methyltransferase domain containing 	ENST00000538413.1|LRTOMT|ENSG00000184154.8|leucine rich transmembrane and O-methyltransferase domain containing
hg19_v2_chr17_+_7761013_7761074	22.2401	RFX3_RFX2	ENST00000571846.1|CYB5D1|ENSG00000182224.7|cytochrome b5 domain containing 1
hg19_v2_chr2_+_109403193_109403270	22.0492	RFX3_RFX2	ENST00000412964.2|CCDC138|ENSG00000163006.7|coiled-coil domain containing 138 	ENST00000295124.4|CCDC138|ENSG00000163006.7|coiled-coil domain containing 138
hg19_v2_chr19_+_35630344_35630384	21.9817	RFX3_RFX2	ENST00000455515.2|FXYD1|ENSG00000266964.1|FXYD domain containing ion transport regulator 1
hg19_v2_chr19_-_55690758_55690780	21.8291	RFX3_RFX2	ENST00000590851.1|SYT5|ENSG00000129990.10|synaptotagmin V
hg19_v2_chr10_+_103348031_103348092	21.2792	RFX3_RFX2	ENST00000370151.4|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse) 	ENST00000370147.1|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse) 	ENST00000370148.2|DPCD|ENSG00000166171.8|deleted in primary ciliary dyskinesia homolog (mouse)
hg19_v2_chr2_-_110962544_110962643	21.2709	RFX3_RFX2	ENST00000355301.4|NPHP1|ENSG00000144061.8|nephronophthisis 1 (juvenile) 	ENST00000445609.2|NPHP1|ENSG00000144061.8|nephronophthisis 1 (juvenile) 	ENST00000417665.1|NPHP1|ENSG00000144061.8|nephronophthisis 1 (juvenile) 	ENST00000418527.1|NPHP1|ENSG00000144061.8|nephronophthisis 1 (juvenile) 	ENST00000316534.4|NPHP1|ENSG00000144061.8|nephronophthisis 1 (juvenile) 	ENST00000393272.3|NPHP1|ENSG00000144061.8|nephronophthisis 1 (juvenile)
hg19_v2_chr2_-_62733476_62733476	21.173	RFX3_RFX2	ENST00000335390.5|TMEM17|ENSG00000186889.5|transmembrane protein 17
hg19_v2_chr2_-_20189819_20189923	20.9439	RFX3_RFX2	ENST00000281405.4|WDR35|ENSG00000118965.10|WD repeat domain 35 	ENST00000345530.3|WDR35|ENSG00000118965.10|WD repeat domain 35
hg19_v2_chr2_-_27712583_27712688	20.9397	RFX3_RFX2	ENST00000260570.3|IFT172|ENSG00000138002.10|intraflagellar transport 172 homolog (Chlamydomonas) 	ENST00000359466.6|IFT172|ENSG00000138002.10|intraflagellar transport 172 homolog (Chlamydomonas) 	ENST00000416524.2|IFT172|ENSG00000138002.10|intraflagellar transport 172 homolog (Chlamydomonas)
hg19_v2_chr9_+_131218408_131218487	20.8906	RFX3_RFX2	ENST00000351030.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000604420.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000535026.1|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000448249.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2 	ENST00000393527.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr17_-_19266045_19266068	20.8832	RFX3_RFX2	ENST00000395616.3|B9D1|ENSG00000108641.10|B9 protein domain 1
hg19_v2_chr19_-_11545920_11545947	20.8309	RFX3_RFX2	ENST00000356392.4|CCDC151|ENSG00000198003.7|coiled-coil domain containing 151 	ENST00000591179.1|CCDC151|ENSG00000198003.7|coiled-coil domain containing 151
hg19_v2_chr11_-_47600320_47600545	20.7492	RFX3_RFX2	ENST00000525720.1|KBTBD4|ENSG00000123444.9|kelch repeat and BTB (POZ) domain containing 4 	ENST00000531067.1|KBTBD4|ENSG00000123444.9|kelch repeat and BTB (POZ) domain containing 4 	ENST00000533290.1|KBTBD4|ENSG00000123444.9|kelch repeat and BTB (POZ) domain containing 4 	ENST00000529499.1|KBTBD4|ENSG00000123444.9|kelch repeat and BTB (POZ) domain containing 4 	ENST00000529946.1|KBTBD4|ENSG00000123444.9|kelch repeat and BTB (POZ) domain containing 4 	ENST00000526005.1|KBTBD4|ENSG00000123444.9|kelch repeat and BTB (POZ) domain containing 4 	ENST00000395288.2|KBTBD4|ENSG00000123444.9|kelch repeat and BTB (POZ) domain containing 4 	ENST00000534239.1|KBTBD4|ENSG00000123444.9|kelch repeat and BTB (POZ) domain containing 4
hg19_v2_chr11_-_47600549_47600567	20.7182	RFX3_RFX2	ENST00000430070.2|KBTBD4|ENSG00000123444.9|kelch repeat and BTB (POZ) domain containing 4
hg19_v2_chr2_+_55746722_55746740	20.5629	RFX3_RFX2	ENST00000339012.3|CCDC104|ENSG00000163001.7|coiled-coil domain containing 104
hg19_v2_chr10_+_134145735_134145783	20.121	RFX3_RFX2	ENST00000368613.4|LRRC27|ENSG00000148814.13|leucine rich repeat containing 27
hg19_v2_chr11_+_111808119_111808151	19.9846	RFX3_RFX2	ENST00000531396.1|DIXDC1|ENSG00000150764.9|DIX domain containing 1
hg19_v2_chr19_-_55791431_55791508	19.8508	RFX3_RFX2	ENST00000593263.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000376343.3|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr2_+_55746746_55746872	19.7964	RFX3_RFX2	ENST00000406691.3|CCDC104|ENSG00000163001.7|coiled-coil domain containing 104 	ENST00000349456.4|CCDC104|ENSG00000163001.7|coiled-coil domain containing 104 	ENST00000407816.3|CCDC104|ENSG00000163001.7|coiled-coil domain containing 104 	ENST00000403007.3|CCDC104|ENSG00000163001.7|coiled-coil domain containing 104
hg19_v2_chr7_+_150065879_150065960	19.7049	RFX3_RFX2	ENST00000397281.2|REPIN1|ENSG00000214022.7|replication initiator 1 	ENST00000444957.1|REPIN1|ENSG00000214022.7|replication initiator 1 	ENST00000478789.1|ZNF775|ENSG00000196456.4|zinc finger protein 775 	ENST00000466559.1|REPIN1|ENSG00000214022.7|replication initiator 1 	ENST00000489432.2|REPIN1|ENSG00000214022.7|replication initiator 1 	ENST00000475514.1|REPIN1|ENSG00000214022.7|replication initiator 1 	ENST00000482680.1|REPIN1|ENSG00000214022.7|replication initiator 1 	ENST00000488943.1|REPIN1|ENSG00000214022.7|replication initiator 1 	ENST00000518514.1|REPIN1|ENSG00000214022.7|replication initiator 1
hg19_v2_chr7_+_150065278_150065369	19.641	RFX3_RFX2	ENST00000519397.1|REPIN1|ENSG00000214022.7|replication initiator 1 	ENST00000479668.1|REPIN1|ENSG00000214022.7|replication initiator 1 	ENST00000540729.1|REPIN1|ENSG00000214022.7|replication initiator 1
hg19_v2_chr13_-_24463530_24463592	19.5913	RFX3_RFX2	ENST00000382172.3|MIPEP|ENSG00000027001.7|mitochondrial intermediate peptidase
hg19_v2_chr16_+_89724434_89724510	19.529	RFX3_RFX2	ENST00000568929.1|SPATA33|ENSG00000167523.9|spermatogenesis associated 33
hg19_v2_chr2_-_233792837_233792888	19.4085	RFX3_RFX2	ENST00000373552.4|NGEF|ENSG00000066248.10|neuronal guanine nucleotide exchange factor 	ENST00000409079.1|NGEF|ENSG00000066248.10|neuronal guanine nucleotide exchange factor
hg19_v2_chr16_-_53737795_53737850	19.4073	RFX3_RFX2	ENST00000262135.4|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000564374.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000566096.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like
hg19_v2_chr16_+_89724188_89724261	19.398	RFX3_RFX2	ENST00000301031.4|SPATA33|ENSG00000167523.9|spermatogenesis associated 33 	ENST00000566204.1|SPATA33|ENSG00000167523.9|spermatogenesis associated 33 	ENST00000579310.1|SPATA33|ENSG00000167523.9|spermatogenesis associated 33
hg19_v2_chrX_-_106449656_106449675	19.2698	RFX3_RFX2	ENST00000372466.4|NUP62CL|ENSG00000198088.6|nucleoporin 62kDa C-terminal like 	ENST00000421752.1|NUP62CL|ENSG00000198088.6|nucleoporin 62kDa C-terminal like 	ENST00000372461.3|NUP62CL|ENSG00000198088.6|nucleoporin 62kDa C-terminal like
hg19_v2_chr7_+_2598628_2598718	19.1531	RFX3_RFX2	ENST00000402050.2|IQCE|ENSG00000106012.13|IQ motif containing E 	ENST00000404984.1|IQCE|ENSG00000106012.13|IQ motif containing E 	ENST00000415271.2|IQCE|ENSG00000106012.13|IQ motif containing E 	ENST00000438376.2|IQCE|ENSG00000106012.13|IQ motif containing E
hg19_v2_chr16_-_53737722_53737790	19.0173	RFX3_RFX2	ENST00000569716.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000562588.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000562230.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000379925.3|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000563746.1|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like 	ENST00000568653.3|RPGRIP1L|ENSG00000103494.8|RPGRIP1-like
hg19_v2_chr12_-_131323754_131323820	18.8899	RFX3_RFX2	ENST00000261653.6|STX2|ENSG00000111450.9|syntaxin 2
hg19_v2_chr1_-_86861660_86861710	18.5368	RFX3_RFX2	ENST00000486215.1|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like
hg19_v2_chr1_+_245133062_245133171	18.108	RFX3_RFX2	ENST00000366523.1|EFCAB2|ENSG00000203666.8|EF-hand calcium binding domain 2
hg19_v2_chr1_-_26633067_26633145	17.968	RFX3_RFX2	ENST00000421827.2|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000374215.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000374223.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000357089.4|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000535108.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000314675.7|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000436301.2|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000423664.1|UBXN11|ENSG00000158062.16|UBX domain protein 11 	ENST00000374221.3|UBXN11|ENSG00000158062.16|UBX domain protein 11
hg19_v2_chrX_+_129473916_129474026	17.8826	RFX3_RFX2	ENST00000545805.1|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14 	ENST00000543953.1|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14 	ENST00000218197.5|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14
hg19_v2_chr14_-_20774092_20774153	17.8315	RFX3_RFX2	ENST00000423949.2|TTC5|ENSG00000136319.7|tetratricopeptide repeat domain 5 	ENST00000553828.1|TTC5|ENSG00000136319.7|tetratricopeptide repeat domain 5 	ENST00000258821.3|TTC5|ENSG00000136319.7|tetratricopeptide repeat domain 5
hg19_v2_chr1_+_144339738_144339738	17.8229	RFX3_RFX2	ENST00000538264.1|AL592284.1|ENSG00000231360.2|Protein LOC642441
hg19_v2_chr19_-_50528584_50528670	17.5525	RFX3_RFX2	ENST00000594092.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000443401.2|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000594948.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000377011.2|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000593919.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000601324.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000316763.3|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000601341.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000600259.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3
hg19_v2_chr19_-_55791540_55791549	17.3279	RFX3_RFX2	ENST00000433386.2|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr17_-_61523622_61523739	17.3236	RFX3_RFX2	ENST00000448884.2|CYB561|ENSG00000008283.11|cytochrome b561 	ENST00000582297.1|CYB561|ENSG00000008283.11|cytochrome b561 	ENST00000582034.1|CYB561|ENSG00000008283.11|cytochrome b561 	ENST00000578072.1|CYB561|ENSG00000008283.11|cytochrome b561 	ENST00000360793.3|CYB561|ENSG00000008283.11|cytochrome b561
hg19_v2_chr15_+_55700741_55700774	16.906	RFX3_RFX2	ENST00000569691.1|C15orf65|ENSG00000261652.2|chromosome 15 open reading frame 65
hg19_v2_chr7_-_51384451_51384522	16.9034	RFX3_RFX2	ENST00000441453.1|COBL|ENSG00000106078.13|cordon-bleu WH2 repeat protein 	ENST00000265136.7|COBL|ENSG00000106078.13|cordon-bleu WH2 repeat protein 	ENST00000395542.2|COBL|ENSG00000106078.13|cordon-bleu WH2 repeat protein 	ENST00000395540.2|COBL|ENSG00000106078.13|cordon-bleu WH2 repeat protein
hg19_v2_chr16_+_89724263_89724279	16.8843	RFX3_RFX2	ENST00000564238.1|SPATA33|ENSG00000167523.9|spermatogenesis associated 33
hg19_v2_chr1_+_15573757_15573785	16.798	RFX3_RFX2	ENST00000358897.4|FHAD1|ENSG00000142621.15|forkhead-associated (FHA) phosphopeptide binding domain 1 	ENST00000417793.1|FHAD1|ENSG00000142621.15|forkhead-associated (FHA) phosphopeptide binding domain 1 	ENST00000375999.3|FHAD1|ENSG00000142621.15|forkhead-associated (FHA) phosphopeptide binding domain 1 	ENST00000433640.2|FHAD1|ENSG00000142621.15|forkhead-associated (FHA) phosphopeptide binding domain 1
hg19_v2_chr5_-_132073210_132073330	16.7474	RFX3_RFX2	ENST00000378735.1|KIF3A|ENSG00000131437.11|kinesin family member 3A 	ENST00000378746.4|KIF3A|ENSG00000131437.11|kinesin family member 3A
hg19_v2_chr3_-_42003479_42003612	16.7247	RFX3_RFX2	ENST00000420927.1|ULK4|ENSG00000168038.6|unc-51 like kinase 4
hg19_v2_chr11_+_134201768_134201910	16.6554	RFX3_RFX2	ENST00000535456.2|GLB1L2|ENSG00000149328.10|galactosidase, beta 1-like 2 	ENST00000339772.7|GLB1L2|ENSG00000149328.10|galactosidase, beta 1-like 2
hg19_v2_chr15_+_72978539_72978578	16.624	RFX3_RFX2	ENST00000539603.1|BBS4|ENSG00000140463.9|Bardet-Biedl syndrome 4 	ENST00000569338.1|BBS4|ENSG00000140463.9|Bardet-Biedl syndrome 4
hg19_v2_chrX_+_129473859_129473904	16.4498	RFX3_RFX2	ENST00000424447.1|SLC25A14|ENSG00000102078.11|solute carrier family 25 (mitochondrial carrier, brain), member 14
hg19_v2_chr4_-_156298028_156298039	16.4133	RFX3_RFX2	ENST00000433024.1|MAP9|ENSG00000164114.14|microtubule-associated protein 9 	ENST00000379248.2|MAP9|ENSG00000164114.14|microtubule-associated protein 9
hg19_v2_chr13_+_37006398_37006417	16.3901	RFX3_RFX2	ENST00000418263.1|CCNA1|ENSG00000133101.5|cyclin A1
hg19_v2_chr2_+_232063436_232063467	16.3773	RFX3_RFX2	ENST00000440107.1|ARMC9|ENSG00000135931.13|armadillo repeat containing 9
hg19_v2_chr3_+_126113734_126113794	16.1853	RFX3_RFX2	ENST00000352312.1|CCDC37|ENSG00000163885.7|coiled-coil domain containing 37 	ENST00000393425.1|CCDC37|ENSG00000163885.7|coiled-coil domain containing 37
hg19_v2_chr13_-_31736132_31736176	16.165	RFX3_RFX2	ENST00000429785.2|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1
hg19_v2_chr13_+_103046954_103046990	16.1031	RFX3_RFX2	ENST00000606448.1|FGF14-AS2|ENSG00000272143.1|FGF14 antisense RNA 2
hg19_v2_chr13_+_37006421_37006495	16.0958	RFX3_RFX2	ENST00000255465.4|CCNA1|ENSG00000133101.5|cyclin A1
hg19_v2_chr17_-_56296580_56296666	16.0596	RFX3_RFX2	ENST00000313863.6|MKS1|ENSG00000011143.12|Meckel syndrome, type 1 	ENST00000546108.1|MKS1|ENSG00000011143.12|Meckel syndrome, type 1 	ENST00000337050.7|MKS1|ENSG00000011143.12|Meckel syndrome, type 1 	ENST00000393119.2|MKS1|ENSG00000011143.12|Meckel syndrome, type 1
hg19_v2_chr10_-_104178857_104178919	16.0484	RFX3_RFX2	ENST00000020673.5|PSD|ENSG00000059915.12|pleckstrin and Sec7 domain containing
hg19_v2_chr6_-_84937314_84937372	16.0333	RFX3_RFX2	ENST00000257766.4|KIAA1009|ENSG00000135315.7|KIAA1009 	ENST00000403245.3|KIAA1009|ENSG00000135315.7|KIAA1009
hg19_v2_chr3_+_130745769_130745802	15.9844	RFX3_RFX2	ENST00000412440.2|NEK11|ENSG00000114670.9|NIMA-related kinase 11
hg19_v2_chr10_-_104179682_104179717	15.9056	RFX3_RFX2	ENST00000406432.1|PSD|ENSG00000059915.12|pleckstrin and Sec7 domain containing
hg19_v2_chr17_-_61523535_61523559	15.8911	RFX3_RFX2	ENST00000584031.1|CYB561|ENSG00000008283.11|cytochrome b561 	ENST00000392976.1|CYB561|ENSG00000008283.11|cytochrome b561
hg19_v2_chr15_+_72978521_72978537	15.8284	RFX3_RFX2	ENST00000542334.1|BBS4|ENSG00000140463.9|Bardet-Biedl syndrome 4 	ENST00000268057.4|BBS4|ENSG00000140463.9|Bardet-Biedl syndrome 4
hg19_v2_chr16_+_19729586_19729643	15.6009	RFX3_RFX2	ENST00000564186.1|IQCK|ENSG00000174628.12|IQ motif containing K 	ENST00000541926.1|IQCK|ENSG00000174628.12|IQ motif containing K 	ENST00000433597.2|IQCK|ENSG00000174628.12|IQ motif containing K
hg19_v2_chr19_-_55791563_55791749	15.5979	RFX3_RFX2	ENST00000588971.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000255631.5|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000587551.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr13_+_73356197_73356221	15.5791	RFX3_RFX2	ENST00000326291.6|PIBF1|ENSG00000083535.11|progesterone immunomodulatory binding factor 1
hg19_v2_chr2_-_203736334_203736411	15.3794	RFX3_RFX2	ENST00000392237.2|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like 	ENST00000416760.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like 	ENST00000412210.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like
hg19_v2_chr17_-_19265855_19265958	15.2322	RFX3_RFX2	ENST00000440841.1|B9D1|ENSG00000108641.10|B9 protein domain 1 	ENST00000395615.1|B9D1|ENSG00000108641.10|B9 protein domain 1 	ENST00000461069.2|B9D1|ENSG00000108641.10|B9 protein domain 1
hg19_v2_chr2_+_128403439_128403578	15.2181	RFX3_RFX2	ENST00000544369.1|GPR17|ENSG00000144230.12|G protein-coupled receptor 17
hg19_v2_chr11_+_102980251_102980304	15.1415	RFX3_RFX2	ENST00000334267.7|DYNC2H1|ENSG00000187240.9|dynein, cytoplasmic 2, heavy chain 1 	ENST00000398093.3|DYNC2H1|ENSG00000187240.9|dynein, cytoplasmic 2, heavy chain 1
hg19_v2_chr2_-_43823093_43823113	15.0901	RFX3_RFX2	ENST00000405006.4|THADA|ENSG00000115970.14|thyroid adenoma associated
hg19_v2_chr9_+_131218336_131218366	14.9822	RFX3_RFX2	ENST00000372814.3|ODF2|ENSG00000136811.12|outer dense fiber of sperm tails 2
hg19_v2_chr4_-_156298087_156298127	14.9578	RFX3_RFX2	ENST00000311277.4|MAP9|ENSG00000164114.14|microtubule-associated protein 9
hg19_v2_chr13_-_31736027_31736064	14.7874	RFX3_RFX2	ENST00000380406.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000320027.5|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1 	ENST00000380405.4|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1
hg19_v2_chr1_+_180601139_180601180	14.7822	RFX3_RFX2	ENST00000367590.4|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1 	ENST00000367589.3|XPR1|ENSG00000143324.9|xenotropic and polytropic retrovirus receptor 1
hg19_v2_chr3_+_48507210_48507345	14.6973	RFX3_RFX2	ENST00000433541.1|TREX1|ENSG00000213689.5|three prime repair exonuclease 1 	ENST00000422277.2|TREX1|ENSG00000213689.5|three prime repair exonuclease 1 	ENST00000436480.2|TREX1|ENSG00000213689.5|three prime repair exonuclease 1 	ENST00000444177.1|TREX1|ENSG00000213689.5|three prime repair exonuclease 1
hg19_v2_chr11_+_102980126_102980199	14.6809	RFX3_RFX2	ENST00000375735.2|DYNC2H1|ENSG00000187240.9|dynein, cytoplasmic 2, heavy chain 1
hg19_v2_chr2_+_128403720_128403747	14.6776	RFX3_RFX2	ENST00000272644.3|GPR17|ENSG00000144230.12|G protein-coupled receptor 17
hg19_v2_chr14_-_102771516_102771537	14.5693	RFX3_RFX2	ENST00000524214.1|MOK|ENSG00000080823.17|MOK protein kinase 	ENST00000193029.6|MOK|ENSG00000080823.17|MOK protein kinase 	ENST00000361847.2|MOK|ENSG00000080823.17|MOK protein kinase
hg19_v2_chr7_+_106685079_106685094	14.4705	RFX3_RFX2	ENST00000265717.4|PRKAR2B|ENSG00000005249.8|protein kinase, cAMP-dependent, regulatory, type II, beta
hg19_v2_chr14_-_102771462_102771515	14.4536	RFX3_RFX2	ENST00000522874.1|MOK|ENSG00000080823.17|MOK protein kinase
hg19_v2_chr2_+_121103706_121103754	14.2881	RFX3_RFX2	ENST00000295228.3|INHBB|ENSG00000163083.5|inhibin, beta B
hg19_v2_chr19_-_12807422_12807468	14.2647	RFX3_RFX2	ENST00000380339.3|FBXW9|ENSG00000132004.8|F-box and WD repeat domain containing 9 	ENST00000544494.1|FBXW9|ENSG00000132004.8|F-box and WD repeat domain containing 9 	ENST00000393261.3|FBXW9|ENSG00000132004.8|F-box and WD repeat domain containing 9
hg19_v2_chr19_-_12807395_12807414	14.1763	RFX3_RFX2	ENST00000587955.1|FBXW9|ENSG00000132004.8|F-box and WD repeat domain containing 9
hg19_v2_chr17_-_19265982_19266044	14.1057	RFX3_RFX2	ENST00000268841.6|B9D1|ENSG00000108641.10|B9 protein domain 1 	ENST00000261499.4|B9D1|ENSG00000108641.10|B9 protein domain 1 	ENST00000575478.1|B9D1|ENSG00000108641.10|B9 protein domain 1
hg19_v2_chr1_-_86861936_86862023	14.0045	RFX3_RFX2	ENST00000394733.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000359242.3|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000294678.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000479890.1|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000317336.7|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000370567.1|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000394731.1|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000478286.2|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like 	ENST00000370566.3|ODF2L|ENSG00000122417.11|outer dense fiber of sperm tails 2-like
hg19_v2_chr2_+_232063260_232063424	13.9976	RFX3_RFX2	ENST00000349938.4|ARMC9|ENSG00000135931.13|armadillo repeat containing 9
hg19_v2_chr15_+_67547113_67547149	13.8919	RFX3_RFX2	ENST00000512104.1|IQCH|ENSG00000103599.15|IQ motif containing H 	ENST00000358767.3|IQCH|ENSG00000103599.15|IQ motif containing H 	ENST00000546225.1|IQCH|ENSG00000103599.15|IQ motif containing H
hg19_v2_chr3_+_48507621_48507689	13.8499	RFX3_RFX2	ENST00000456089.1|TREX1|ENSG00000213689.5|three prime repair exonuclease 1
hg19_v2_chr10_-_17243579_17243690	13.8443	RFX3_RFX2	ENST00000525762.1|TRDMT1|ENSG00000107614.17|tRNA aspartic acid methyltransferase 1 	ENST00000412821.3|TRDMT1|ENSG00000107614.17|tRNA aspartic acid methyltransferase 1 	ENST00000351358.4|TRDMT1|ENSG00000107614.17|tRNA aspartic acid methyltransferase 1 	ENST00000377766.5|TRDMT1|ENSG00000107614.17|tRNA aspartic acid methyltransferase 1 	ENST00000358282.7|TRDMT1|ENSG00000107614.17|tRNA aspartic acid methyltransferase 1 	ENST00000488990.1|TRDMT1|ENSG00000107614.17|tRNA aspartic acid methyltransferase 1 	ENST00000377799.3|TRDMT1|ENSG00000107614.17|tRNA aspartic acid methyltransferase 1
hg19_v2_chr19_-_55791058_55791244	13.7721	RFX3_RFX2	ENST00000587959.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000585927.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000587922.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000585698.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr17_+_68100989_68101026	13.386	RFX3_RFX2	ENST00000585558.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000392670.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr14_-_74181106_74181128	13.3279	RFX3_RFX2	ENST00000316836.3|PNMA1|ENSG00000176903.3|paraneoplastic Ma antigen 1
hg19_v2_chr4_-_156297949_156297996	13.1779	RFX3_RFX2	ENST00000515654.1|MAP9|ENSG00000164114.14|microtubule-associated protein 9
hg19_v2_chr3_-_10052763_10052816	13.1773	RFX3_RFX2	ENST00000383808.2|AC022007.5|ENSG00000206567.5|AC022007.5	ENST00000426698.1|AC022007.5|ENSG00000206567.5|AC022007.5	ENST00000470827.2|EMC3|ENSG00000125037.8|ER membrane protein complex subunit 3
hg19_v2_chr14_+_24025194_24025231	13.1324	RFX3_RFX2	ENST00000404535.3|THTPA|ENSG00000259431.1|thiamine triphosphatase 	ENST00000288014.6|THTPA|ENSG00000259431.1|thiamine triphosphatase
hg19_v2_chr8_+_13424352_13424417	12.9995	RFX3_RFX2	ENST00000297324.4|C8orf48|ENSG00000164743.4|chromosome 8 open reading frame 48
hg19_v2_chr22_-_44894178_44894203	12.9356	RFX3_RFX2	ENST00000341255.3|LDOC1L|ENSG00000188636.3|leucine zipper, down-regulated in cancer 1-like
hg19_v2_chr4_+_123653807_123653869	12.8847	RFX3_RFX2	ENST00000314218.3|BBS12|ENSG00000181004.5|Bardet-Biedl syndrome 12 	ENST00000542236.1|BBS12|ENSG00000181004.5|Bardet-Biedl syndrome 12
hg19_v2_chr21_-_33985127_33985191	12.8126	RFX3_RFX2	ENST00000290155.3|C21orf59|ENSG00000159079.14|chromosome 21 open reading frame 59
hg19_v2_chr4_-_87281196_87281219	12.7992	RFX3_RFX2	ENST00000359221.3|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10
hg19_v2_chr15_+_56657613_56657651	12.7725	RFX3_RFX2	ENST00000352903.2|TEX9|ENSG00000151575.10|testis expressed 9 	ENST00000537232.1|TEX9|ENSG00000151575.10|testis expressed 9 	ENST00000561221.2|TEX9|ENSG00000151575.10|testis expressed 9 	ENST00000558083.2|TEX9|ENSG00000151575.10|testis expressed 9
hg19_v2_chr11_+_63706444_63706486	12.5974	RFX3_RFX2	ENST00000377793.4|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000456907.2|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000539656.1|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit
hg19_v2_chr9_+_33025209_33025279	12.5207	RFX3_RFX2	ENST00000330899.4|DNAJA1|ENSG00000086061.11|DnaJ (Hsp40) homolog, subfamily A, member 1 	ENST00000544625.1|DNAJA1|ENSG00000086061.11|DnaJ (Hsp40) homolog, subfamily A, member 1
hg19_v2_chr2_+_214149113_214149211	12.5096	RFX3_RFX2	ENST00000331683.5|SPAG16|ENSG00000144451.14|sperm associated antigen 16 	ENST00000432529.2|SPAG16|ENSG00000144451.14|sperm associated antigen 16 	ENST00000413312.1|SPAG16|ENSG00000144451.14|sperm associated antigen 16 	ENST00000272898.7|SPAG16|ENSG00000144451.14|sperm associated antigen 16 	ENST00000447990.1|SPAG16|ENSG00000144451.14|sperm associated antigen 16
hg19_v2_chr21_-_33984888_33984903	12.4963	RFX3_RFX2	ENST00000382549.4|C21orf59|ENSG00000159079.14|chromosome 21 open reading frame 59 	ENST00000540881.1|C21orf59|ENSG00000159079.14|chromosome 21 open reading frame 59
hg19_v2_chr13_-_31736478_31736525	12.274	RFX3_RFX2	ENST00000445273.2|HSPH1|ENSG00000120694.15|heat shock 105kDa/110kDa protein 1
hg19_v2_chr11_+_66278080_66278135	12.2054	RFX3_RFX2	ENST00000318312.7|BBS1|ENSG00000174483.15|Bardet-Biedl syndrome 1 	ENST00000526815.1|BBS1|ENSG00000174483.15|Bardet-Biedl syndrome 1 	ENST00000537537.1|BBS1|ENSG00000174483.15|Bardet-Biedl syndrome 1 	ENST00000525809.1|BBS1|ENSG00000174483.15|Bardet-Biedl syndrome 1 	ENST00000455748.2|BBS1|ENSG00000174483.15|Bardet-Biedl syndrome 1 	ENST00000393994.2|BBS1|ENSG00000174483.15|Bardet-Biedl syndrome 1
hg19_v2_chr3_+_38080691_38080770	12.1539	RFX3_RFX2	ENST00000308059.6|DLEC1|ENSG00000008226.15|deleted in lung and esophageal cancer 1 	ENST00000346219.3|DLEC1|ENSG00000008226.15|deleted in lung and esophageal cancer 1 	ENST00000452631.2|DLEC1|ENSG00000008226.15|deleted in lung and esophageal cancer 1
hg19_v2_chr20_+_20033158_20033223	12.101	RFX3_RFX2	ENST00000340348.6|C20orf26|ENSG00000089101.13|chromosome 20 open reading frame 26 	ENST00000377309.2|C20orf26|ENSG00000089101.13|chromosome 20 open reading frame 26 	ENST00000389656.3|C20orf26|ENSG00000089101.13|chromosome 20 open reading frame 26 	ENST00000377306.1|C20orf26|ENSG00000089101.13|chromosome 20 open reading frame 26 	ENST00000245957.5|C20orf26|ENSG00000089101.13|chromosome 20 open reading frame 26 	ENST00000377303.2|C20orf26|ENSG00000089101.13|chromosome 20 open reading frame 26 	ENST00000475466.1|C20orf26|ENSG00000089101.13|chromosome 20 open reading frame 26
hg19_v2_chr12_+_9067123_9067159	11.8893	RFX3_RFX2	ENST00000543824.1|PHC1|ENSG00000111752.6|polyhomeotic homolog 1 (Drosophila)
hg19_v2_chr11_-_124981475_124981659	11.6929	RFX3_RFX2	ENST00000532156.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000532407.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000279968.4|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000527766.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529583.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000524373.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000527271.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000526175.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529609.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000533273.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000531909.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529530.1|TMEM218|ENSG00000150433.5|transmembrane protein 218
hg19_v2_chr20_+_43991668_43991853	11.5172	RFX3_RFX2	ENST00000243918.5|SYS1|ENSG00000204070.5|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) 	ENST00000426004.1|SYS1|ENSG00000204070.5|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
hg19_v2_chr6_-_116575226_116575278	11.513	RFX3_RFX2	ENST00000420283.1|TSPYL4|ENSG00000187189.9|TSPY-like 4
hg19_v2_chr21_-_33984865_33984883	11.5127	RFX3_RFX2	ENST00000458138.1|C21orf59|ENSG00000159079.14|chromosome 21 open reading frame 59
hg19_v2_chr11_+_134201911_134201956	11.4514	RFX3_RFX2	ENST00000389881.3|GLB1L2|ENSG00000149328.10|galactosidase, beta 1-like 2
hg19_v2_chr11_-_67271723_67272028	11.4466	RFX3_RFX2	ENST00000533391.1|PITPNM1|ENSG00000110697.8|phosphatidylinositol transfer protein, membrane-associated 1 	ENST00000534749.1|PITPNM1|ENSG00000110697.8|phosphatidylinositol transfer protein, membrane-associated 1 	ENST00000532703.1|PITPNM1|ENSG00000110697.8|phosphatidylinositol transfer protein, membrane-associated 1
hg19_v2_chr5_+_176873789_176873853	11.3971	RFX3_RFX2	ENST00000323249.3|PRR7|ENSG00000131188.7|proline rich 7 (synaptic) 	ENST00000502922.1|PRR7|ENSG00000131188.7|proline rich 7 (synaptic)
hg19_v2_chr14_-_94854926_94855002	11.3199	RFX3_RFX2	ENST00000402629.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000556091.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 	ENST00000554720.1|SERPINA1|ENSG00000197249.8|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1
hg19_v2_chr8_+_17780346_17780375	11.1653	RFX3_RFX2	ENST00000325083.8|PCM1|ENSG00000078674.13|pericentriolar material 1
hg19_v2_chr1_+_43637996_43638036	11.065	RFX3_RFX2	ENST00000528956.1|WDR65|ENSG00000243710.3|WD repeat domain 65 	ENST00000529956.1|WDR65|ENSG00000243710.3|WD repeat domain 65
hg19_v2_chr2_-_203735976_203735992	11.0382	RFX3_RFX2	ENST00000435143.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like
hg19_v2_chr1_-_74663825_74663871	11.0133	RFX3_RFX2	ENST00000370911.3|LRRIQ3|ENSG00000162620.11|leucine-rich repeats and IQ motif containing 3 	ENST00000370909.2|LRRIQ3|ENSG00000162620.11|leucine-rich repeats and IQ motif containing 3 	ENST00000354431.4|LRRIQ3|ENSG00000162620.11|leucine-rich repeats and IQ motif containing 3
hg19_v2_chr3_+_130745688_130745761	10.9204	RFX3_RFX2	ENST00000510769.1|NEK11|ENSG00000114670.9|NIMA-related kinase 11 	ENST00000429253.2|NEK11|ENSG00000114670.9|NIMA-related kinase 11 	ENST00000356918.4|NEK11|ENSG00000114670.9|NIMA-related kinase 11 	ENST00000510688.1|NEK11|ENSG00000114670.9|NIMA-related kinase 11 	ENST00000511262.1|NEK11|ENSG00000114670.9|NIMA-related kinase 11 	ENST00000383366.4|NEK11|ENSG00000114670.9|NIMA-related kinase 11
hg19_v2_chr11_-_64885111_64885202	10.8729	RFX3_RFX2	ENST00000528598.1|ZNHIT2|ENSG00000174276.5|zinc finger, HIT-type containing 2 	ENST00000310597.4|ZNHIT2|ENSG00000174276.5|zinc finger, HIT-type containing 2
hg19_v2_chr15_-_43802769_43802815	10.526	RFX3_RFX2	ENST00000263801.3|TP53BP1|ENSG00000067369.9|tumor protein p53 binding protein 1
hg19_v2_chr9_+_136325089_136325144	10.4457	RFX3_RFX2	ENST00000291722.7|CACFD1|ENSG00000160325.10|calcium channel flower domain containing 1 	ENST00000316948.4|CACFD1|ENSG00000160325.10|calcium channel flower domain containing 1 	ENST00000540581.1|CACFD1|ENSG00000160325.10|calcium channel flower domain containing 1
hg19_v2_chr1_+_44457261_44457280	10.4002	RFX3_RFX2	ENST00000372318.3|CCDC24|ENSG00000159214.8|coiled-coil domain containing 24
hg19_v2_chr12_-_131323719_131323746	10.2118	RFX3_RFX2	ENST00000392373.2|STX2|ENSG00000111450.9|syntaxin 2
hg19_v2_chr6_+_35227449_35227551	10.2101	RFX3_RFX2	ENST00000373953.3|ZNF76|ENSG00000065029.10|zinc finger protein 76 	ENST00000440666.2|ZNF76|ENSG00000065029.10|zinc finger protein 76 	ENST00000339411.5|ZNF76|ENSG00000065029.10|zinc finger protein 76
hg19_v2_chr3_+_49027308_49027340	10.1805	RFX3_RFX2	ENST00000383729.4|P4HTM|ENSG00000178467.13|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum) 	ENST00000343546.4|P4HTM|ENSG00000178467.13|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)
hg19_v2_chr6_-_110011704_110011713	10.0116	RFX3_RFX2	ENST00000448084.2|AK9|ENSG00000155085.11|adenylate kinase 9
hg19_v2_chr19_+_58919992_58920057	9.84555	RFX3_RFX2	ENST00000306910.4|ZNF584|ENSG00000171574.13|zinc finger protein 584 	ENST00000598901.1|ZNF584|ENSG00000171574.13|zinc finger protein 584 	ENST00000593920.1|ZNF584|ENSG00000171574.13|zinc finger protein 584 	ENST00000596281.1|ZNF584|ENSG00000171574.13|zinc finger protein 584
hg19_v2_chr21_-_34185989_34186003	9.81933	RFX3_RFX2	ENST00000487113.1|C21orf62|ENSG00000205929.5|chromosome 21 open reading frame 62 	ENST00000382373.4|C21orf62|ENSG00000205929.5|chromosome 21 open reading frame 62
hg19_v2_chr6_-_112408661_112408743	9.80423	RFX3_RFX2	ENST00000368662.5|TUBE1|ENSG00000074935.9|tubulin, epsilon 1
hg19_v2_chr2_+_230787213_230787227	9.77121	RFX3_RFX2	ENST00000409992.1|FBXO36|ENSG00000153832.7|F-box protein 36
hg19_v2_chr17_+_41132564_41132600	9.74727	RFX3_RFX2	ENST00000361677.1|RUNDC1|ENSG00000198863.3|RUN domain containing 1 	ENST00000589705.1|RUNDC1|ENSG00000198863.3|RUN domain containing 1
hg19_v2_chr6_+_31783291_31783328	9.67383	RFX3_RFX2	ENST00000375651.5|HSPA1A|ENSG00000204389.8|heat shock 70kDa protein 1A 	ENST00000608703.1|HSPA1A|ENSG00000204389.8|heat shock 70kDa protein 1A 	ENST00000458062.2|HSPA1A|ENSG00000204389.8|heat shock 70kDa protein 1A
hg19_v2_chr2_+_11273179_11273261	9.54702	RFX3_RFX2	ENST00000381585.3|C2orf50|ENSG00000150873.7|chromosome 2 open reading frame 50 	ENST00000405022.3|C2orf50|ENSG00000150873.7|chromosome 2 open reading frame 50
hg19_v2_chr1_-_6052463_6052542	9.53822	RFX3_RFX2	ENST00000378156.4|NPHP4|ENSG00000131697.13|nephronophthisis 4
hg19_v2_chr2_+_230787201_230787212	9.53524	RFX3_RFX2	ENST00000283946.3|FBXO36|ENSG00000153832.7|F-box protein 36
hg19_v2_chr6_-_110011718_110011873	9.52164	RFX3_RFX2	ENST00000532976.1|AK9|ENSG00000155085.11|adenylate kinase 9
hg19_v2_chr8_+_21912328_21912474	9.5041	RFX3_RFX2	ENST00000432128.1|DMTN|ENSG00000158856.13|dematin actin binding protein 	ENST00000443491.2|DMTN|ENSG00000158856.13|dematin actin binding protein 	ENST00000517600.1|DMTN|ENSG00000158856.13|dematin actin binding protein 	ENST00000523782.2|DMTN|ENSG00000158856.13|dematin actin binding protein
hg19_v2_chr15_-_85197501_85197566	9.46692	RFX3_RFX2	ENST00000434634.2|WDR73|ENSG00000177082.8|WD repeat domain 73
hg19_v2_chr19_+_58920102_58920149	9.46038	RFX3_RFX2	ENST00000599238.1|ZNF584|ENSG00000171574.13|zinc finger protein 584 	ENST00000322834.7|ZNF584|ENSG00000171574.13|zinc finger protein 584
hg19_v2_chr6_+_79577189_79577286	9.45162	RFX3_RFX2	ENST00000369940.2|IRAK1BP1|ENSG00000146243.9|interleukin-1 receptor-associated kinase 1 binding protein 1
hg19_v2_chr8_-_101118210_101118344	9.44868	RFX3_RFX2	ENST00000360863.6|RGS22|ENSG00000132554.15|regulator of G-protein signaling 22
hg19_v2_chr2_+_44001172_44001230	9.43114	RFX3_RFX2	ENST00000260605.8|DYNC2LI1|ENSG00000138036.14|dynein, cytoplasmic 2, light intermediate chain 1 	ENST00000406852.3|DYNC2LI1|ENSG00000138036.14|dynein, cytoplasmic 2, light intermediate chain 1 	ENST00000443170.3|DYNC2LI1|ENSG00000138036.14|dynein, cytoplasmic 2, light intermediate chain 1 	ENST00000398823.2|DYNC2LI1|ENSG00000138036.14|dynein, cytoplasmic 2, light intermediate chain 1 	ENST00000605786.1|DYNC2LI1|ENSG00000138036.14|dynein, cytoplasmic 2, light intermediate chain 1
hg19_v2_chr5_+_61708582_61708616	9.3857	RFX3_RFX2	ENST00000325324.6|IPO11|ENSG00000086200.12|importin 11
hg19_v2_chr3_-_42814708_42814751	9.36287	RFX3_RFX2	ENST00000310232.6|CCDC13|ENSG00000244607.1|coiled-coil domain containing 13
hg19_v2_chr2_-_43823119_43823209	9.21586	RFX3_RFX2	ENST00000403856.1|THADA|ENSG00000115970.14|thyroid adenoma associated 	ENST00000404790.1|THADA|ENSG00000115970.14|thyroid adenoma associated 	ENST00000405975.2|THADA|ENSG00000115970.14|thyroid adenoma associated 	ENST00000415080.2|THADA|ENSG00000115970.14|thyroid adenoma associated
hg19_v2_chr19_+_50529212_50529297	9.11667	RFX3_RFX2	ENST00000270617.3|ZNF473|ENSG00000142528.11|zinc finger protein 473 	ENST00000445728.3|ZNF473|ENSG00000142528.11|zinc finger protein 473 	ENST00000601364.1|ZNF473|ENSG00000142528.11|zinc finger protein 473
hg19_v2_chr15_-_51914810_51914853	9.07874	RFX3_RFX2	ENST00000543779.2|DMXL2|ENSG00000104093.9|Dmx-like 2 	ENST00000449909.3|DMXL2|ENSG00000104093.9|Dmx-like 2
hg19_v2_chr11_-_8832182_8832387	9.06582	RFX3_RFX2	ENST00000527510.1|ST5|ENSG00000166444.13|suppression of tumorigenicity 5 	ENST00000528527.1|ST5|ENSG00000166444.13|suppression of tumorigenicity 5 	ENST00000528523.1|ST5|ENSG00000166444.13|suppression of tumorigenicity 5 	ENST00000313726.6|ST5|ENSG00000166444.13|suppression of tumorigenicity 5
hg19_v2_chr16_-_58163299_58163354	9.01416	RFX3_RFX2	ENST00000262498.3|C16orf80|ENSG00000070761.3|chromosome 16 open reading frame 80
hg19_v2_chr13_+_24553933_24553949	8.90911	RFX3_RFX2	ENST00000424834.2|SPATA13|ENSG00000182957.11|spermatogenesis associated 13 	ENST00000439928.2|RP11-309I15.1|ENSG00000228741.2|RP11-309I15.1
hg19_v2_chr1_-_167905225_167905296	8.87516	RFX3_RFX2	ENST00000367846.4|MPC2|ENSG00000143158.6|mitochondrial pyruvate carrier 2
hg19_v2_chr1_-_44820880_44820946	8.6918	RFX3_RFX2	ENST00000372257.2|ERI3|ENSG00000117419.10|ERI1 exoribonuclease family member 3 	ENST00000457571.1|ERI3|ENSG00000117419.10|ERI1 exoribonuclease family member 3 	ENST00000452396.1|ERI3|ENSG00000117419.10|ERI1 exoribonuclease family member 3
hg19_v2_chr11_-_7041466_7041602	8.65318	RFX3_RFX2	ENST00000536068.1|ZNF214|ENSG00000149050.5|zinc finger protein 214 	ENST00000278314.4|ZNF214|ENSG00000149050.5|zinc finger protein 214
hg19_v2_chr12_+_120933904_120933923	8.64134	RFX3_RFX2	ENST00000550178.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000550845.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000549989.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000552870.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1
hg19_v2_chr16_-_68482440_68482591	8.60732	RFX3_RFX2	ENST00000219334.5|SMPD3|ENSG00000103056.7|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
hg19_v2_chr12_+_49932886_49932940	8.54625	RFX3_RFX2	ENST00000257981.6|KCNH3|ENSG00000135519.6|potassium voltage-gated channel, subfamily H (eag-related), member 3
hg19_v2_chr9_-_130635741_130635823	8.49468	RFX3_RFX2	ENST00000223836.10|AK1|ENSG00000106992.13|adenylate kinase 1
hg19_v2_chr15_-_51914996_51915035	8.48601	RFX3_RFX2	ENST00000251076.5|DMXL2|ENSG00000104093.9|Dmx-like 2
hg19_v2_chr14_+_60558627_60558738	8.44938	RFX3_RFX2	ENST00000317623.4|PCNXL4|ENSG00000126773.8|pecanex-like 4 (Drosophila) 	ENST00000391611.2|PCNXL4|ENSG00000126773.8|pecanex-like 4 (Drosophila) 	ENST00000406854.1|PCNXL4|ENSG00000126773.8|pecanex-like 4 (Drosophila) 	ENST00000406949.1|PCNXL4|ENSG00000126773.8|pecanex-like 4 (Drosophila)
hg19_v2_chr19_+_50528971_50529063	8.31511	RFX3_RFX2	ENST00000598809.1|ZNF473|ENSG00000142528.11|zinc finger protein 473 	ENST00000595661.1|ZNF473|ENSG00000142528.11|zinc finger protein 473 	ENST00000391821.2|ZNF473|ENSG00000142528.11|zinc finger protein 473
hg19_v2_chr17_+_2240916_2240989	8.29218	RFX3_RFX2	ENST00000574563.1|SGSM2|ENSG00000141258.8|small G protein signaling modulator 2
hg19_v2_chr14_+_45431379_45431465	8.21421	RFX3_RFX2	ENST00000361577.3|FAM179B|ENSG00000198718.8|family with sequence similarity 179, member B 	ENST00000361462.2|FAM179B|ENSG00000198718.8|family with sequence similarity 179, member B 	ENST00000382233.2|FAM179B|ENSG00000198718.8|family with sequence similarity 179, member B
hg19_v2_chrX_+_48455866_48455905	8.19556	RFX3_RFX2	ENST00000376729.5|WDR13|ENSG00000101940.13|WD repeat domain 13 	ENST00000218056.5|WDR13|ENSG00000101940.13|WD repeat domain 13
hg19_v2_chr22_+_41601209_41601355	8.14662	RFX3_RFX2	ENST00000216237.5|L3MBTL2|ENSG00000100395.10|l(3)mbt-like 2 (Drosophila)
hg19_v2_chr14_+_24025462_24025571	8.14035	RFX3_RFX2	ENST00000556015.1|THTPA|ENSG00000259431.1|thiamine triphosphatase 	ENST00000554970.1|THTPA|ENSG00000259431.1|thiamine triphosphatase 	ENST00000554789.1|THTPA|ENSG00000259431.1|thiamine triphosphatase
hg19_v2_chr1_-_59249732_59249785	8.12437	RFX3_RFX2	ENST00000371222.2|JUN|ENSG00000177606.5|jun proto-oncogene
hg19_v2_chr11_-_115375107_115375283	8.10493	RFX3_RFX2	ENST00000545380.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000452722.3|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000537058.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000536727.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000542447.2|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000331581.6|CADM1|ENSG00000182985.12|cell adhesion molecule 1
hg19_v2_chr18_-_32957260_32957309	8.08644	RFX3_RFX2	ENST00000587422.1|ZNF396|ENSG00000186496.6|zinc finger protein 396 	ENST00000306346.1|ZNF396|ENSG00000186496.6|zinc finger protein 396 	ENST00000589332.1|ZNF396|ENSG00000186496.6|zinc finger protein 396 	ENST00000586687.1|ZNF396|ENSG00000186496.6|zinc finger protein 396 	ENST00000585522.1|ZNF396|ENSG00000186496.6|zinc finger protein 396
hg19_v2_chr19_-_7553852_7553874	8.05022	RFX3_RFX2	ENST00000593547.1|PEX11G|ENSG00000104883.3|peroxisomal biogenesis factor 11 gamma
hg19_v2_chr3_-_49761337_49761421	8.03325	RFX3_RFX2	ENST00000535833.1|AMIGO3|ENSG00000176020.7|adhesion molecule with Ig-like domain 3 	ENST00000308388.6|GMPPB|ENSG00000173540.8|GDP-mannose pyrophosphorylase B 	ENST00000480687.1|GMPPB|ENSG00000173540.8|GDP-mannose pyrophosphorylase B 	ENST00000308375.6|GMPPB|ENSG00000173540.8|GDP-mannose pyrophosphorylase B
hg19_v2_chr12_+_56511943_56512191	7.99939	RFX3_RFX2	ENST00000257940.2|ZC3H10|ENSG00000135482.2|zinc finger CCCH-type containing 10 	ENST00000551790.1|ESYT1|ENSG00000139641.8|extended synaptotagmin-like protein 1 	ENST00000552345.1|ZC3H10|ENSG00000135482.2|zinc finger CCCH-type containing 10 	ENST00000551880.1|ZC3H10|ENSG00000135482.2|zinc finger CCCH-type containing 10 	ENST00000546903.1|ZC3H10|ENSG00000135482.2|zinc finger CCCH-type containing 10
hg19_v2_chr21_-_37432540_37432662	7.96583	RFX3_RFX2	ENST00000443703.1|SETD4|ENSG00000185917.9|SET domain containing 4 	ENST00000399207.1|SETD4|ENSG00000185917.9|SET domain containing 4 	ENST00000399215.1|SETD4|ENSG00000185917.9|SET domain containing 4 	ENST00000442559.1|SETD4|ENSG00000185917.9|SET domain containing 4 	ENST00000399205.1|SETD4|ENSG00000185917.9|SET domain containing 4 	ENST00000429161.1|SETD4|ENSG00000185917.9|SET domain containing 4 	ENST00000424303.1|SETD4|ENSG00000185917.9|SET domain containing 4 	ENST00000399208.2|SETD4|ENSG00000185917.9|SET domain containing 4
hg19_v2_chr10_+_12391481_12391584	7.85868	RFX3_RFX2	ENST00000378847.3|CAMK1D|ENSG00000183049.8|calcium/calmodulin-dependent protein kinase ID
hg19_v2_chr20_-_271304_271422	7.83599	RFX3_RFX2	ENST00000400269.3|C20orf96|ENSG00000196476.7|chromosome 20 open reading frame 96 	ENST00000360321.2|C20orf96|ENSG00000196476.7|chromosome 20 open reading frame 96
hg19_v2_chr17_+_11501816_11501834	7.82585	RFX3_RFX2	ENST00000454412.2|DNAH9|ENSG00000007174.13|dynein, axonemal, heavy chain 9
hg19_v2_chr11_+_61129456_61129527	7.74362	RFX3_RFX2	ENST00000278826.6|TMEM138|ENSG00000149483.7|transmembrane protein 138
hg19_v2_chr21_-_37432764_37432831	7.68473	RFX3_RFX2	ENST00000399212.1|SETD4|ENSG00000185917.9|SET domain containing 4 	ENST00000446166.1|SETD4|ENSG00000185917.9|SET domain containing 4
hg19_v2_chr19_-_7553889_7553929	7.67577	RFX3_RFX2	ENST00000221480.1|PEX11G|ENSG00000104883.3|peroxisomal biogenesis factor 11 gamma
hg19_v2_chr12_+_105724414_105724510	7.6549	RFX3_RFX2	ENST00000443585.1|C12orf75|ENSG00000235162.4|chromosome 12 open reading frame 75 	ENST00000552457.1|C12orf75|ENSG00000235162.4|chromosome 12 open reading frame 75 	ENST00000549893.1|C12orf75|ENSG00000235162.4|chromosome 12 open reading frame 75
hg19_v2_chr6_-_46620522_46620560	7.55247	RFX3_RFX2	ENST00000275016.2|CYP39A1|ENSG00000146233.3|cytochrome P450, family 39, subfamily A, polypeptide 1
hg19_v2_chr3_+_12525931_12526020	7.51334	RFX3_RFX2	ENST00000446004.1|TSEN2|ENSG00000154743.13|TSEN2 tRNA splicing endonuclease subunit 	ENST00000314571.7|TSEN2|ENSG00000154743.13|TSEN2 tRNA splicing endonuclease subunit 	ENST00000454502.2|TSEN2|ENSG00000154743.13|TSEN2 tRNA splicing endonuclease subunit 	ENST00000383797.5|TSEN2|ENSG00000154743.13|TSEN2 tRNA splicing endonuclease subunit 	ENST00000402228.3|TSEN2|ENSG00000154743.13|TSEN2 tRNA splicing endonuclease subunit 	ENST00000284995.6|TSEN2|ENSG00000154743.13|TSEN2 tRNA splicing endonuclease subunit 	ENST00000444864.1|TSEN2|ENSG00000154743.13|TSEN2 tRNA splicing endonuclease subunit
hg19_v2_chr8_+_17780483_17780537	7.4658	RFX3_RFX2	ENST00000517730.1|PCM1|ENSG00000078674.13|pericentriolar material 1 	ENST00000518537.1|PCM1|ENSG00000078674.13|pericentriolar material 1 	ENST00000523055.1|PCM1|ENSG00000078674.13|pericentriolar material 1 	ENST00000519253.1|PCM1|ENSG00000078674.13|pericentriolar material 1
hg19_v2_chr9_-_35812236_35812274	7.45204	RFX3_RFX2	ENST00000340291.2|SPAG8|ENSG00000137098.9|sperm associated antigen 8
hg19_v2_chr16_+_19078960_19078993	7.43954	RFX3_RFX2	ENST00000568985.1|COQ7|ENSG00000167186.6|coenzyme Q7 homolog, ubiquinone (yeast) 	ENST00000566110.1|COQ7|ENSG00000167186.6|coenzyme Q7 homolog, ubiquinone (yeast)
hg19_v2_chr7_+_156433461_156433493	7.43208	RFX3_RFX2	ENST00000317955.5|RNF32|ENSG00000105982.12|ring finger protein 32 	ENST00000405335.1|RNF32|ENSG00000105982.12|ring finger protein 32
hg19_v2_chr7_+_156433396_156433448	7.41628	RFX3_RFX2	ENST00000432459.2|RNF32|ENSG00000105982.12|ring finger protein 32
hg19_v2_chr14_-_50101931_50101969	7.34836	RFX3_RFX2	ENST00000298292.8|DNAAF2|ENSG00000165506.10|dynein, axonemal, assembly factor 2 	ENST00000406043.3|DNAAF2|ENSG00000165506.10|dynein, axonemal, assembly factor 2
hg19_v2_chr6_-_121655552_121655592	7.30412	RFX3_RFX2	ENST00000275159.6|TBC1D32|ENSG00000146350.9|TBC1 domain family, member 32
hg19_v2_chr6_+_170615819_170615877	7.28162	RFX3_RFX2	ENST00000476287.1|FAM120B|ENSG00000112584.9|family with sequence similarity 120B 	ENST00000252510.9|FAM120B|ENSG00000112584.9|family with sequence similarity 120B
hg19_v2_chr3_-_52804872_52804967	7.27864	RFX3_RFX2	ENST00000535191.1|NEK4|ENSG00000114904.8|NIMA-related kinase 4 	ENST00000461689.1|NEK4|ENSG00000114904.8|NIMA-related kinase 4 	ENST00000383721.4|NEK4|ENSG00000114904.8|NIMA-related kinase 4 	ENST00000233027.5|NEK4|ENSG00000114904.8|NIMA-related kinase 4
hg19_v2_chr8_-_101118185_101118205	7.24609	RFX3_RFX2	ENST00000523437.1|RGS22|ENSG00000132554.15|regulator of G-protein signaling 22
hg19_v2_chr12_+_120933859_120933899	7.22908	RFX3_RFX2	ENST00000242577.6|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000548214.1|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1 	ENST00000392508.2|DYNLL1|ENSG00000088986.6|dynein, light chain, LC8-type 1
hg19_v2_chr16_-_54963026_54963108	7.14697	RFX3_RFX2	ENST00000560208.1|CRNDE|ENSG00000245694.4|colorectal neoplasia differentially expressed (non-protein coding) 	ENST00000557792.1|CRNDE|ENSG00000245694.4|colorectal neoplasia differentially expressed (non-protein coding)
hg19_v2_chr16_+_2076869_2076929	7.10852	RFX3_RFX2	ENST00000424542.2|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2 	ENST00000432365.2|SLC9A3R2|ENSG00000065054.9|solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 2
hg19_v2_chr20_-_271009_271088	7.0437	RFX3_RFX2	ENST00000382369.5|C20orf96|ENSG00000196476.7|chromosome 20 open reading frame 96
hg19_v2_chr17_-_26662440_26662463	7.00037	RFX3_RFX2	ENST00000578122.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas)
hg19_v2_chr2_+_202937972_202937988	6.96912	RFX3_RFX2	ENST00000541917.1|AC079354.1|ENSG00000182329.6|uncharacterized protein KIAA2012  	ENST00000295844.3|AC079354.1|ENSG00000182329.6|uncharacterized protein KIAA2012
hg19_v2_chr17_-_8079648_8079737	6.96902	RFX3_RFX2	ENST00000449985.2|TMEM107|ENSG00000179029.10|transmembrane protein 107 	ENST00000532998.1|TMEM107|ENSG00000179029.10|transmembrane protein 107 	ENST00000437139.2|TMEM107|ENSG00000179029.10|transmembrane protein 107 	ENST00000533070.1|TMEM107|ENSG00000179029.10|transmembrane protein 107 	ENST00000316425.5|TMEM107|ENSG00000179029.10|transmembrane protein 107
hg19_v2_chr7_+_156433573_156433618	6.96857	RFX3_RFX2	ENST00000311822.8|RNF32|ENSG00000105982.12|ring finger protein 32
hg19_v2_chr15_+_98503922_98503964	6.90619	RFX3_RFX2	ENST00000268042.6|ARRDC4|ENSG00000140450.7|arrestin domain containing 4
hg19_v2_chr16_-_88923285_88923388	6.89994	RFX3_RFX2	ENST00000542788.1|GALNS|ENSG00000141012.8|galactosamine (N-acetyl)-6-sulfate sulfatase 	ENST00000569433.1|GALNS|ENSG00000141012.8|galactosamine (N-acetyl)-6-sulfate sulfatase 	ENST00000268695.5|GALNS|ENSG00000141012.8|galactosamine (N-acetyl)-6-sulfate sulfatase 	ENST00000568311.1|GALNS|ENSG00000141012.8|galactosamine (N-acetyl)-6-sulfate sulfatase
hg19_v2_chr21_-_33984456_33984726	6.8555	RFX3_RFX2	ENST00000431216.1|AP000275.65|ENSG00000265590.5|Uncharacterized protein  	ENST00000553001.1|AP000275.65|ENSG00000265590.5|Uncharacterized protein  	ENST00000440966.1|C21orf59|ENSG00000159079.14|chromosome 21 open reading frame 59
hg19_v2_chr5_-_40798263_40798300	6.75637	RFX3_RFX2	ENST00000296800.4|PRKAA1|ENSG00000132356.7|protein kinase, AMP-activated, alpha 1 catalytic subunit 	ENST00000397128.2|PRKAA1|ENSG00000132356.7|protein kinase, AMP-activated, alpha 1 catalytic subunit
hg19_v2_chr17_+_6554971_6554995	6.7508	RFX3_RFX2	ENST00000391428.2|C17orf100|ENSG00000212734.4|chromosome 17 open reading frame 100
hg19_v2_chr11_+_46958248_46958342	6.6528	RFX3_RFX2	ENST00000536126.1|C11orf49|ENSG00000149179.9|chromosome 11 open reading frame 49 	ENST00000278460.7|C11orf49|ENSG00000149179.9|chromosome 11 open reading frame 49 	ENST00000378618.2|C11orf49|ENSG00000149179.9|chromosome 11 open reading frame 49 	ENST00000395460.2|C11orf49|ENSG00000149179.9|chromosome 11 open reading frame 49 	ENST00000378615.3|C11orf49|ENSG00000149179.9|chromosome 11 open reading frame 49 	ENST00000543718.1|C11orf49|ENSG00000149179.9|chromosome 11 open reading frame 49
hg19_v2_chr21_-_37432832_37432874	6.65115	RFX3_RFX2	ENST00000332131.4|SETD4|ENSG00000185917.9|SET domain containing 4
hg19_v2_chr16_-_54962625_54962637	6.5499	RFX3_RFX2	ENST00000559432.1|CRNDE|ENSG00000245694.4|colorectal neoplasia differentially expressed (non-protein coding)
hg19_v2_chr16_-_30022735_30022751	6.52364	RFX3_RFX2	ENST00000564944.1|DOC2A|ENSG00000149927.13|double C2-like domains, alpha
hg19_v2_chr19_+_5681011_5681075	6.48687	RFX3_RFX2	ENST00000581893.1|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000411793.2|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000301382.4|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000581773.1|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000423665.2|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000583928.1|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000342970.2|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000422535.2|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000581521.1|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000339423.2|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like
hg19_v2_chr11_+_130542851_130542851	6.47614	RFX3_RFX2	ENST00000317019.2|C11orf44|ENSG00000175728.2|chromosome 11 open reading frame 44
hg19_v2_chr17_+_53046096_53046157	6.47527	RFX3_RFX2	ENST00000376352.2|STXBP4|ENSG00000166263.9|syntaxin binding protein 4 	ENST00000299341.4|STXBP4|ENSG00000166263.9|syntaxin binding protein 4 	ENST00000405898.1|STXBP4|ENSG00000166263.9|syntaxin binding protein 4 	ENST00000434978.2|STXBP4|ENSG00000166263.9|syntaxin binding protein 4 	ENST00000398391.2|STXBP4|ENSG00000166263.9|syntaxin binding protein 4
hg19_v2_chr6_+_44310421_44310486	6.46161	RFX3_RFX2	ENST00000288390.2|SPATS1|ENSG00000249481.2|spermatogenesis associated, serine-rich 1
hg19_v2_chr6_+_44310376_44310413	6.45747	RFX3_RFX2	ENST00000515220.1|SPATS1|ENSG00000249481.2|spermatogenesis associated, serine-rich 1 	ENST00000323108.8|SPATS1|ENSG00000249481.2|spermatogenesis associated, serine-rich 1
hg19_v2_chr6_-_19804973_19805010	6.37961	RFX3_RFX2	ENST00000457670.1|RP4-625H18.2|ENSG00000228412.2|RP4-625H18.2	ENST00000607810.1|RP4-625H18.2|ENSG00000228412.2|RP4-625H18.2	ENST00000606628.1|RP4-625H18.2|ENSG00000228412.2|RP4-625H18.2
hg19_v2_chr16_+_19079215_19079246	6.22331	RFX3_RFX2	ENST00000544894.2|COQ7|ENSG00000167186.6|coenzyme Q7 homolog, ubiquinone (yeast) 	ENST00000561858.1|COQ7|ENSG00000167186.6|coenzyme Q7 homolog, ubiquinone (yeast)
hg19_v2_chr6_+_13925098_13925163	6.19662	RFX3_RFX2	ENST00000488300.1|RNF182|ENSG00000180537.8|ring finger protein 182 	ENST00000544682.1|RNF182|ENSG00000180537.8|ring finger protein 182 	ENST00000420478.2|RNF182|ENSG00000180537.8|ring finger protein 182
hg19_v2_chr19_+_17413663_17413679	6.18996	RFX3_RFX2	ENST00000594999.1|MRPL34|ENSG00000130312.2|mitochondrial ribosomal protein L34
hg19_v2_chr19_+_41313017_41313148	6.14546	RFX3_RFX2	ENST00000595621.1|EGLN2|ENSG00000269858.1|egl-9 family hypoxia-inducible factor 2 	ENST00000595051.1|EGLN2|ENSG00000269858.1|egl-9 family hypoxia-inducible factor 2
hg19_v2_chr16_+_3062457_3062457	6.12261	RFX3_RFX2	ENST00000445369.2|CLDN9|ENSG00000213937.3|claudin 9
hg19_v2_chr1_+_84630367_84630400	6.11213	RFX3_RFX2	ENST00000370680.1|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr2_-_26864228_26864237	6.09186	RFX3_RFX2	ENST00000288861.4|CIB4|ENSG00000157884.6|calcium and integrin binding family member 4
hg19_v2_chr9_-_140009130_140009209	6.01116	RFX3_RFX2	ENST00000497375.1|DPP7|ENSG00000176978.9|dipeptidyl-peptidase 7 	ENST00000371579.2|DPP7|ENSG00000176978.9|dipeptidyl-peptidase 7
hg19_v2_chr22_-_24181174_24181200	6.01095	RFX3_RFX2	ENST00000318109.7|DERL3|ENSG00000099958.10|derlin 3 	ENST00000406855.3|DERL3|ENSG00000099958.10|derlin 3 	ENST00000404056.1|DERL3|ENSG00000099958.10|derlin 3 	ENST00000476077.1|DERL3|ENSG00000099958.10|derlin 3
hg19_v2_chr12_+_53818855_53818919	5.89773	RFX3_RFX2	ENST00000550839.1|AMHR2|ENSG00000135409.6|anti-Mullerian hormone receptor, type II
hg19_v2_chr9_-_116061476_116061476	5.84869	RFX3_RFX2	ENST00000441031.3|RNF183|ENSG00000165188.9|ring finger protein 183
hg19_v2_chr3_+_184056614_184056641	5.82495	RFX3_RFX2	ENST00000453072.1|FAM131A|ENSG00000175182.9|family with sequence similarity 131, member A
hg19_v2_chr11_-_118436606_118436664	5.8174	RFX3_RFX2	ENST00000530872.1|IFT46|ENSG00000118096.3|intraflagellar transport 46 homolog (Chlamydomonas)
hg19_v2_chr17_+_78010428_78010465	5.75181	RFX3_RFX2	ENST00000397545.4|CCDC40|ENSG00000141519.10|coiled-coil domain containing 40 	ENST00000374877.3|CCDC40|ENSG00000141519.10|coiled-coil domain containing 40 	ENST00000269318.5|CCDC40|ENSG00000141519.10|coiled-coil domain containing 40 	ENST00000374876.4|CCDC40|ENSG00000141519.10|coiled-coil domain containing 40 	ENST00000576033.1|CCDC40|ENSG00000141519.10|coiled-coil domain containing 40 	ENST00000574099.1|CCDC40|ENSG00000141519.10|coiled-coil domain containing 40
hg19_v2_chr11_+_93063878_93063910	5.73364	RFX3_RFX2	ENST00000298050.3|CCDC67|ENSG00000165325.9|coiled-coil domain containing 67
hg19_v2_chr10_+_81838792_81838845	5.69862	RFX3_RFX2	ENST00000372273.3|TMEM254|ENSG00000133678.9|transmembrane protein 254
hg19_v2_chr6_-_27440837_27440912	5.65195	RFX3_RFX2	ENST00000211936.6|ZNF184|ENSG00000096654.11|zinc finger protein 184
hg19_v2_chr5_-_81046922_81047072	5.59978	RFX3_RFX2	ENST00000514493.1|SSBP2|ENSG00000145687.11|single-stranded DNA binding protein 2 	ENST00000320672.4|SSBP2|ENSG00000145687.11|single-stranded DNA binding protein 2
hg19_v2_chr2_+_239229082_239229114	5.56974	RFX3_RFX2	ENST00000391993.3|TRAF3IP1|ENSG00000204104.7|TNF receptor-associated factor 3 interacting protein 1 	ENST00000373327.4|TRAF3IP1|ENSG00000204104.7|TNF receptor-associated factor 3 interacting protein 1
hg19_v2_chr17_-_26662464_26662519	5.50635	RFX3_RFX2	ENST00000579419.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000585313.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000395418.3|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000578985.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000577498.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000585089.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000357896.3|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas)
hg19_v2_chr11_-_118436707_118436791	5.49476	RFX3_RFX2	ENST00000264020.2|IFT46|ENSG00000118096.3|intraflagellar transport 46 homolog (Chlamydomonas) 	ENST00000264021.3|IFT46|ENSG00000118096.3|intraflagellar transport 46 homolog (Chlamydomonas)
hg19_v2_chr16_-_54962704_54962812	5.48738	RFX3_RFX2	ENST00000502066.2|CRNDE|ENSG00000245694.4|colorectal neoplasia differentially expressed (non-protein coding) 	ENST00000560912.1|CRNDE|ENSG00000245694.4|colorectal neoplasia differentially expressed (non-protein coding) 	ENST00000558952.1|CRNDE|ENSG00000245694.4|colorectal neoplasia differentially expressed (non-protein coding)
hg19_v2_chr5_+_49963239_49963391	5.48059	RFX3_RFX2	ENST00000505554.1|PARP8|ENSG00000151883.12|poly (ADP-ribose) polymerase family, member 8
hg19_v2_chr6_+_12717892_12717903	5.47991	RFX3_RFX2	ENST00000379350.1|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chr17_+_2240775_2240812	5.45295	RFX3_RFX2	ENST00000268989.3|SGSM2|ENSG00000141258.8|small G protein signaling modulator 2 	ENST00000426855.2|SGSM2|ENSG00000141258.8|small G protein signaling modulator 2
hg19_v2_chrX_+_153146127_153146127	5.42289	RFX3_RFX2	ENST00000452593.1|LCA10|ENSG00000196987.2|Putative lung carcinoma-associated protein 10  	ENST00000357566.1|LCA10|ENSG00000196987.2|Putative lung carcinoma-associated protein 10
hg19_v2_chr1_+_161129254_161129327	5.4091	RFX3_RFX2	ENST00000368002.3|USP21|ENSG00000143258.11|ubiquitin specific peptidase 21 	ENST00000289865.8|USP21|ENSG00000143258.11|ubiquitin specific peptidase 21 	ENST00000479344.1|USP21|ENSG00000143258.11|ubiquitin specific peptidase 21 	ENST00000368001.1|USP21|ENSG00000143258.11|ubiquitin specific peptidase 21
hg19_v2_chr8_+_16884740_16884804	5.37904	RFX3_RFX2	ENST00000318063.5|MICU3|ENSG00000155970.7|mitochondrial calcium uptake family, member 3
hg19_v2_chr4_+_20702030_20702051	5.35846	RFX3_RFX2	ENST00000510051.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000503585.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000360916.5|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000295290.8|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000514485.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like
hg19_v2_chr14_-_74417096_74417117	5.33474	RFX3_RFX2	ENST00000286544.3|FAM161B|ENSG00000156050.4|family with sequence similarity 161, member B
hg19_v2_chr20_-_20033052_20033136	5.31587	RFX3_RFX2	ENST00000536226.1|CRNKL1|ENSG00000101343.10|crooked neck pre-mRNA splicing factor 1
hg19_v2_chr6_+_135818979_135819107	5.24154	RFX3_RFX2	ENST00000421378.2|LINC00271|ENSG00000231028.4|long intergenic non-protein coding RNA 271 	ENST00000579057.1|LINC00271|ENSG00000231028.4|long intergenic non-protein coding RNA 271 	ENST00000436554.1|LINC00271|ENSG00000231028.4|long intergenic non-protein coding RNA 271 	ENST00000438618.2|LINC00271|ENSG00000231028.4|long intergenic non-protein coding RNA 271
hg19_v2_chr14_+_76044934_76044982	5.17732	RFX3_RFX2	ENST00000238667.4|FLVCR2|ENSG00000119686.5|feline leukemia virus subgroup C cellular receptor family, member 2
hg19_v2_chr1_+_40839369_40839449	5.16402	RFX3_RFX2	ENST00000372718.3|SMAP2|ENSG00000084070.7|small ArfGAP2
hg19_v2_chr2_+_239229129_239229201	5.16043	RFX3_RFX2	ENST00000391994.2|TRAF3IP1|ENSG00000204104.7|TNF receptor-associated factor 3 interacting protein 1
hg19_v2_chr16_-_30022293_30022401	5.05591	RFX3_RFX2	ENST00000565273.1|DOC2A|ENSG00000149927.13|double C2-like domains, alpha 	ENST00000567332.2|DOC2A|ENSG00000149927.13|double C2-like domains, alpha 	ENST00000350119.4|DOC2A|ENSG00000149927.13|double C2-like domains, alpha
hg19_v2_chr3_+_118865028_118865147	5.02771	RFX3_RFX2	ENST00000460150.1|C3orf30|ENSG00000163424.4|chromosome 3 open reading frame 30
hg19_v2_chr2_-_241497390_241497438	5.0079	RFX3_RFX2	ENST00000272972.3|ANKMY1|ENSG00000144504.11|ankyrin repeat and MYND domain containing 1 	ENST00000401804.1|ANKMY1|ENSG00000144504.11|ankyrin repeat and MYND domain containing 1 	ENST00000361678.4|ANKMY1|ENSG00000144504.11|ankyrin repeat and MYND domain containing 1 	ENST00000405523.3|ANKMY1|ENSG00000144504.11|ankyrin repeat and MYND domain containing 1
hg19_v2_chr11_-_61129335_61129385	5.00483	RFX3_RFX2	ENST00000545361.1|CYB561A3|ENSG00000162144.5|cytochrome b561 family, member A3 	ENST00000539128.1|CYB561A3|ENSG00000162144.5|cytochrome b561 family, member A3 	ENST00000546151.1|CYB561A3|ENSG00000162144.5|cytochrome b561 family, member A3 	ENST00000447532.2|CYB561A3|ENSG00000162144.5|cytochrome b561 family, member A3
hg19_v2_chr10_+_134145614_134145724	4.99519	RFX3_RFX2	ENST00000368615.3|LRRC27|ENSG00000148814.13|leucine rich repeat containing 27 	ENST00000392638.2|LRRC27|ENSG00000148814.13|leucine rich repeat containing 27 	ENST00000344079.5|LRRC27|ENSG00000148814.13|leucine rich repeat containing 27 	ENST00000356571.4|LRRC27|ENSG00000148814.13|leucine rich repeat containing 27 	ENST00000368614.3|LRRC27|ENSG00000148814.13|leucine rich repeat containing 27
hg19_v2_chr20_+_62185491_62185539	4.99359	RFX3_RFX2	ENST00000370097.1|C20orf195|ENSG00000125531.5|chromosome 20 open reading frame 195
hg19_v2_chr2_-_202645835_202645912	4.99186	RFX3_RFX2	ENST00000264276.6|ALS2|ENSG00000003393.10|amyotrophic lateral sclerosis 2 (juvenile)
hg19_v2_chr16_+_57662138_57662253	4.98852	RFX3_RFX2	ENST00000562414.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000561969.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000562631.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000563445.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000565338.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000567702.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56
hg19_v2_chr16_+_57662419_57662526	4.98339	RFX3_RFX2	ENST00000388812.4|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000538815.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000456916.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000567154.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000388813.5|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000562558.1|GPR56|ENSG00000205336.7|G protein-coupled receptor 56 	ENST00000566271.2|GPR56|ENSG00000205336.7|G protein-coupled receptor 56
hg19_v2_chr9_-_4666337_4666358	4.9003	RFX3_RFX2	ENST00000381890.5|SPATA6L|ENSG00000106686.12|spermatogenesis associated 6-like
hg19_v2_chr22_+_31892373_31892556	4.86606	RFX3_RFX2	ENST00000443011.1|SFI1|ENSG00000198089.10|Sfi1 homolog, spindle assembly associated (yeast) 	ENST00000400289.1|SFI1|ENSG00000198089.10|Sfi1 homolog, spindle assembly associated (yeast) 	ENST00000444859.1|SFI1|ENSG00000198089.10|Sfi1 homolog, spindle assembly associated (yeast) 	ENST00000400288.2|SFI1|ENSG00000198089.10|Sfi1 homolog, spindle assembly associated (yeast)
hg19_v2_chr8_+_42010464_42010662	4.80795	RFX3_RFX2	ENST00000518421.1|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000174653.3|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000396926.3|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000521280.1|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000522288.1|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit
hg19_v2_chr11_+_61447845_61447910	4.80545	RFX3_RFX2	ENST00000257215.5|DAGLA|ENSG00000134780.5|diacylglycerol lipase, alpha
hg19_v2_chr15_-_43785303_43785369	4.79722	RFX3_RFX2	ENST00000382039.3|TP53BP1|ENSG00000067369.9|tumor protein p53 binding protein 1 	ENST00000450115.2|TP53BP1|ENSG00000067369.9|tumor protein p53 binding protein 1 	ENST00000382044.4|TP53BP1|ENSG00000067369.9|tumor protein p53 binding protein 1
hg19_v2_chr6_-_27440460_27440505	4.76684	RFX3_RFX2	ENST00000377419.1|ZNF184|ENSG00000096654.11|zinc finger protein 184
hg19_v2_chr12_-_123921256_123921273	4.74208	RFX3_RFX2	ENST00000280571.8|RILPL2|ENSG00000150977.9|Rab interacting lysosomal protein-like 2
hg19_v2_chr15_-_55700457_55700520	4.72145	RFX3_RFX2	ENST00000442196.3|CCPG1|ENSG00000260916.1|cell cycle progression 1 	ENST00000563171.1|CCPG1|ENSG00000260916.1|cell cycle progression 1 	ENST00000425574.3|CCPG1|ENSG00000260916.1|cell cycle progression 1
hg19_v2_chr7_+_99699280_99699335	4.69522	RFX3_RFX2	ENST00000421755.1|AP4M1|ENSG00000221838.5|adaptor-related protein complex 4, mu 1 subunit
hg19_v2_chr9_-_125027079_125027130	4.66477	RFX3_RFX2	ENST00000417201.3|RBM18|ENSG00000119446.9|RNA binding motif protein 18
hg19_v2_chr5_-_81046904_81046921	4.6568	RFX3_RFX2	ENST00000515395.1|SSBP2|ENSG00000145687.11|single-stranded DNA binding protein 2
hg19_v2_chr19_+_18530146_18530172	4.65548	RFX3_RFX2	ENST00000348495.6|SSBP4|ENSG00000130511.11|single stranded DNA binding protein 4 	ENST00000270061.7|SSBP4|ENSG00000130511.11|single stranded DNA binding protein 4
hg19_v2_chr1_-_211848899_211848981	4.65139	RFX3_RFX2	ENST00000366998.3|NEK2|ENSG00000117650.8|NIMA-related kinase 2 	ENST00000540251.1|NEK2|ENSG00000117650.8|NIMA-related kinase 2 	ENST00000366999.4|NEK2|ENSG00000117650.8|NIMA-related kinase 2
hg19_v2_chr2_-_44588679_44588693	4.63138	RFX3_RFX2	ENST00000409411.1|PREPL|ENSG00000138078.11|prolyl endopeptidase-like
hg19_v2_chr4_+_56815102_56815147	4.59485	RFX3_RFX2	ENST00000257287.4|CEP135|ENSG00000174799.6|centrosomal protein 135kDa
hg19_v2_chr16_-_46797149_46797169	4.5918	RFX3_RFX2	ENST00000536476.1|MYLK3|ENSG00000140795.8|myosin light chain kinase 3
hg19_v2_chr12_+_108525517_108525531	4.56333	RFX3_RFX2	ENST00000332082.4|WSCD2|ENSG00000075035.5|WSC domain containing 2
hg19_v2_chr2_-_39103014_39103084	4.55838	RFX3_RFX2	ENST00000295373.6|DHX57|ENSG00000163214.16|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 	ENST00000417233.1|DHX57|ENSG00000163214.16|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
hg19_v2_chr10_+_25305524_25305595	4.5498	RFX3_RFX2	ENST00000524413.1|THNSL1|ENSG00000185875.8|threonine synthase-like 1 (S. cerevisiae) 	ENST00000376356.4|THNSL1|ENSG00000185875.8|threonine synthase-like 1 (S. cerevisiae)
hg19_v2_chr12_+_9067327_9067378	4.50401	RFX3_RFX2	ENST00000433083.2|PHC1|ENSG00000111752.6|polyhomeotic homolog 1 (Drosophila) 	ENST00000544916.1|PHC1|ENSG00000111752.6|polyhomeotic homolog 1 (Drosophila) 	ENST00000544539.1|PHC1|ENSG00000111752.6|polyhomeotic homolog 1 (Drosophila) 	ENST00000539063.1|PHC1|ENSG00000111752.6|polyhomeotic homolog 1 (Drosophila)
hg19_v2_chr5_-_81046841_81046902	4.49739	RFX3_RFX2	ENST00000509013.2|SSBP2|ENSG00000145687.11|single-stranded DNA binding protein 2 	ENST00000505980.1|SSBP2|ENSG00000145687.11|single-stranded DNA binding protein 2 	ENST00000509053.1|SSBP2|ENSG00000145687.11|single-stranded DNA binding protein 2
hg19_v2_chr16_-_67840442_67840555	4.32744	RFX3_RFX2	ENST00000536251.1|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000448631.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000602677.1|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000411657.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000425512.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000317506.3|RANBP10|ENSG00000141084.6|RAN binding protein 10
hg19_v2_chr2_-_44588694_44588707	4.27909	RFX3_RFX2	ENST00000409957.1|PREPL|ENSG00000138078.11|prolyl endopeptidase-like
hg19_v2_chr11_-_61129723_61129776	4.20329	RFX3_RFX2	ENST00000537680.1|CYB561A3|ENSG00000162144.5|cytochrome b561 family, member A3 	ENST00000426130.2|CYB561A3|ENSG00000162144.5|cytochrome b561 family, member A3 	ENST00000294072.4|CYB561A3|ENSG00000162144.5|cytochrome b561 family, member A3
hg19_v2_chr19_+_10541462_10541526	4.20103	RFX3_RFX2	ENST00000293683.5|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific
hg19_v2_chr11_-_132813566_132813624	4.18646	RFX3_RFX2	ENST00000331898.7|OPCML|ENSG00000183715.9|opioid binding protein/cell adhesion molecule-like
hg19_v2_chr4_+_128554081_128554121	4.16018	RFX3_RFX2	ENST00000335251.6|INTU|ENSG00000164066.8|inturned planar cell polarity protein 	ENST00000296461.5|INTU|ENSG00000164066.8|inturned planar cell polarity protein
hg19_v2_chr7_+_6144514_6144614	4.14264	RFX3_RFX2	ENST00000306177.5|USP42|ENSG00000106346.7|ubiquitin specific peptidase 42 	ENST00000465073.2|USP42|ENSG00000106346.7|ubiquitin specific peptidase 42
hg19_v2_chr1_+_110163709_110163891	4.0966	RFX3_RFX2	ENST00000369840.2|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2 	ENST00000527846.1|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2
hg19_v2_chr3_-_72897545_72897631	4.08139	RFX3_RFX2	ENST00000325599.8|SHQ1|ENSG00000144736.9|SHQ1, H/ACA ribonucleoprotein assembly factor
hg19_v2_chr7_+_99699179_99699214	4.07681	RFX3_RFX2	ENST00000438383.1|AP4M1|ENSG00000221838.5|adaptor-related protein complex 4, mu 1 subunit 	ENST00000429084.1|AP4M1|ENSG00000221838.5|adaptor-related protein complex 4, mu 1 subunit 	ENST00000359593.4|AP4M1|ENSG00000221838.5|adaptor-related protein complex 4, mu 1 subunit 	ENST00000439416.1|AP4M1|ENSG00000221838.5|adaptor-related protein complex 4, mu 1 subunit
hg19_v2_chr19_-_36606181_36606248	4.07501	RFX3_RFX2	ENST00000221859.4|POLR2I|ENSG00000105258.4|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa
hg19_v2_chr17_+_40950797_40950818	4.04394	RFX3_RFX2	ENST00000588408.1|CNTD1|ENSG00000176563.5|cyclin N-terminal domain containing 1 	ENST00000585355.1|CNTD1|ENSG00000176563.5|cyclin N-terminal domain containing 1
hg19_v2_chr4_-_87281224_87281375	3.95905	RFX3_RFX2	ENST00000395169.3|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10 	ENST00000395161.2|MAPK10|ENSG00000109339.14|mitogen-activated protein kinase 10
hg19_v2_chr2_-_44588624_44588640	3.95314	RFX3_RFX2	ENST00000438314.1|PREPL|ENSG00000138078.11|prolyl endopeptidase-like 	ENST00000409936.1|PREPL|ENSG00000138078.11|prolyl endopeptidase-like
hg19_v2_chr21_-_34186006_34186053	3.925	RFX3_RFX2	ENST00000490358.1|C21orf62|ENSG00000205929.5|chromosome 21 open reading frame 62
hg19_v2_chr9_-_130497565_130497609	3.92261	RFX3_RFX2	ENST00000336067.6|TOR2A|ENSG00000160404.13|torsin family 2, member A 	ENST00000373281.5|TOR2A|ENSG00000160404.13|torsin family 2, member A 	ENST00000373284.5|TOR2A|ENSG00000160404.13|torsin family 2, member A 	ENST00000458505.3|TOR2A|ENSG00000160404.13|torsin family 2, member A
hg19_v2_chr8_-_101117847_101117854	3.90301	RFX3_RFX2	ENST00000523287.1|RGS22|ENSG00000132554.15|regulator of G-protein signaling 22 	ENST00000519092.1|RGS22|ENSG00000132554.15|regulator of G-protein signaling 22
hg19_v2_chr8_+_21916680_21916695	3.84349	RFX3_RFX2	ENST00000358242.3|DMTN|ENSG00000158856.13|dematin actin binding protein 	ENST00000415253.1|DMTN|ENSG00000158856.13|dematin actin binding protein
hg19_v2_chr2_+_220462560_220462604	3.73193	RFX3_RFX2	ENST00000456909.1|STK11IP|ENSG00000144589.16|serine/threonine kinase 11 interacting protein 	ENST00000295641.10|STK11IP|ENSG00000144589.16|serine/threonine kinase 11 interacting protein
hg19_v2_chr14_+_105941118_105941196	3.71836	RFX3_RFX2	ENST00000550577.1|CRIP2|ENSG00000182809.6|cysteine-rich protein 2 	ENST00000538259.2|CRIP2|ENSG00000182809.6|cysteine-rich protein 2
hg19_v2_chr8_+_21916710_21916734	3.66223	RFX3_RFX2	ENST00000523266.1|DMTN|ENSG00000158856.13|dematin actin binding protein 	ENST00000519907.1|DMTN|ENSG00000158856.13|dematin actin binding protein
hg19_v2_chr19_-_18508396_18508460	3.6308	RFX3_RFX2	ENST00000595840.1|LRRC25|ENSG00000175489.9|leucine rich repeat containing 25 	ENST00000339007.3|LRRC25|ENSG00000175489.9|leucine rich repeat containing 25
hg19_v2_chr6_+_116575329_116575390	3.58979	RFX3_RFX2	ENST00000430252.2|DSE|ENSG00000111817.12|dermatan sulfate epimerase 	ENST00000540275.1|DSE|ENSG00000111817.12|dermatan sulfate epimerase 	ENST00000448740.2|RP3-486I3.7|ENSG00000237021.2|RP3-486I3.7
hg19_v2_chr14_-_24664776_24664904	3.58794	RFX3_RFX2	ENST00000530468.1|TM9SF1|ENSG00000100926.10|transmembrane 9 superfamily member 1 	ENST00000528010.1|TM9SF1|ENSG00000100926.10|transmembrane 9 superfamily member 1 	ENST00000396854.4|TM9SF1|ENSG00000100926.10|transmembrane 9 superfamily member 1 	ENST00000524835.1|TM9SF1|ENSG00000100926.10|transmembrane 9 superfamily member 1 	ENST00000261789.4|TM9SF1|ENSG00000100926.10|transmembrane 9 superfamily member 1 	ENST00000525592.1|TM9SF1|ENSG00000100926.10|transmembrane 9 superfamily member 1
hg19_v2_chr11_-_122931881_122932040	3.55882	RFX3_RFX2	ENST00000526110.1|HSPA8|ENSG00000109971.9|heat shock 70kDa protein 8 	ENST00000227378.3|HSPA8|ENSG00000109971.9|heat shock 70kDa protein 8
hg19_v2_chr14_-_24658053_24658170	3.49236	RFX3_RFX2	ENST00000354464.6|IPO4|ENSG00000196497.11|importin 4
hg19_v2_chr14_-_36277857_36278140	3.48419	RFX3_RFX2	ENST00000553892.1|RALGAPA1|ENSG00000174373.11|Ral GTPase activating protein, alpha subunit 1 (catalytic) 	ENST00000382366.3|RALGAPA1|ENSG00000174373.11|Ral GTPase activating protein, alpha subunit 1 (catalytic)
hg19_v2_chr5_+_61874562_61874685	3.47232	RFX3_RFX2	ENST00000334994.5|LRRC70|ENSG00000186105.7|leucine rich repeat containing 70 	ENST00000409534.1|IPO11|ENSG00000086200.12|importin 11
hg19_v2_chr1_-_38325256_38325292	3.41481	RFX3_RFX2	ENST00000373036.4|MTF1|ENSG00000188786.9|metal-regulatory transcription factor 1
hg19_v2_chr19_-_375970_375996	3.41458	RFX3_RFX2	ENST00000346878.2|THEG|ENSG00000105549.6|theg spermatid protein
hg19_v2_chr12_+_121124599_121124672	3.41298	RFX3_RFX2	ENST00000228506.3|MLEC|ENSG00000110917.3|malectin
hg19_v2_chr19_-_376011_376031	3.34662	RFX3_RFX2	ENST00000342640.4|THEG|ENSG00000105549.6|theg spermatid protein
hg19_v2_chr17_-_10017864_10017880	3.29662	RFX3_RFX2	ENST00000323816.4|GAS7|ENSG00000007237.14|growth arrest-specific 7
hg19_v2_chr12_+_51818586_51818663	3.29539	RFX3_RFX2	ENST00000394856.1|SLC4A8|ENSG00000050438.12|solute carrier family 4, sodium bicarbonate cotransporter, member 8
hg19_v2_chr2_+_220144052_220144128	3.2884	RFX3_RFX2	ENST00000425450.1|DNAJB2|ENSG00000135924.11|DnaJ (Hsp40) homolog, subfamily B, member 2 	ENST00000392086.4|DNAJB2|ENSG00000135924.11|DnaJ (Hsp40) homolog, subfamily B, member 2 	ENST00000421532.1|DNAJB2|ENSG00000135924.11|DnaJ (Hsp40) homolog, subfamily B, member 2
hg19_v2_chr19_+_56652556_56652641	3.25254	RFX3_RFX2	ENST00000337080.3|ZNF444|ENSG00000167685.10|zinc finger protein 444
hg19_v2_chr16_+_53738053_53738094	3.25063	RFX3_RFX2	ENST00000394647.3|FTO|ENSG00000140718.14|fat mass and obesity associated
hg19_v2_chr3_+_196439170_196439273	3.16712	RFX3_RFX2	ENST00000392391.3|PIGX|ENSG00000163964.9|phosphatidylinositol glycan anchor biosynthesis, class X 	ENST00000314118.4|PIGX|ENSG00000163964.9|phosphatidylinositol glycan anchor biosynthesis, class X
hg19_v2_chr1_-_231376836_231376865	3.15769	RFX3_RFX2	ENST00000451322.1|C1orf131|ENSG00000143633.8|chromosome 1 open reading frame 131
hg19_v2_chr22_+_31892261_31892278	3.14567	RFX3_RFX2	ENST00000432498.1|SFI1|ENSG00000198089.10|Sfi1 homolog, spindle assembly associated (yeast) 	ENST00000540643.1|SFI1|ENSG00000198089.10|Sfi1 homolog, spindle assembly associated (yeast) 	ENST00000443326.1|SFI1|ENSG00000198089.10|Sfi1 homolog, spindle assembly associated (yeast) 	ENST00000414585.1|SFI1|ENSG00000198089.10|Sfi1 homolog, spindle assembly associated (yeast)
hg19_v2_chrX_+_102024075_102024146	3.1436	RFX3_RFX2	ENST00000431616.1|LINC00630|ENSG00000223546.2|long intergenic non-protein coding RNA 630 	ENST00000440496.1|LINC00630|ENSG00000223546.2|long intergenic non-protein coding RNA 630 	ENST00000420471.1|LINC00630|ENSG00000223546.2|long intergenic non-protein coding RNA 630 	ENST00000435966.1|LINC00630|ENSG00000223546.2|long intergenic non-protein coding RNA 630
hg19_v2_chr17_+_40950900_40950908	3.13387	RFX3_RFX2	ENST00000588527.1|CNTD1|ENSG00000176563.5|cyclin N-terminal domain containing 1
hg19_v2_chr8_+_94712732_94712739	3.12136	RFX3_RFX2	ENST00000518322.1|FAM92A1|ENSG00000188343.8|family with sequence similarity 92, member A1
hg19_v2_chr6_+_30034865_30034937	3.08935	RFX3_RFX2	ENST00000376772.3|PPP1R11|ENSG00000204619.3|protein phosphatase 1, regulatory (inhibitor) subunit 11
hg19_v2_chr16_+_19078911_19078925	3.06056	RFX3_RFX2	ENST00000321998.5|COQ7|ENSG00000167186.6|coenzyme Q7 homolog, ubiquinone (yeast)
hg19_v2_chr1_+_33546714_33546769	3.04821	RFX3_RFX2	ENST00000294517.6|ADC|ENSG00000142920.12|arginine decarboxylase 	ENST00000358680.3|ADC|ENSG00000142920.12|arginine decarboxylase 	ENST00000373443.3|ADC|ENSG00000142920.12|arginine decarboxylase 	ENST00000398167.1|ADC|ENSG00000142920.12|arginine decarboxylase
hg19_v2_chr6_+_13925318_13925424	3.02513	RFX3_RFX2	ENST00000423553.2|RNF182|ENSG00000180537.8|ring finger protein 182 	ENST00000537388.1|RNF182|ENSG00000180537.8|ring finger protein 182
hg19_v2_chr15_+_96873921_96873946	3.01226	RFX3_RFX2	ENST00000394166.3|NR2F2|ENSG00000185551.8|nuclear receptor subfamily 2, group F, member 2
hg19_v2_chr11_-_72492878_72492899	3.00688	RFX3_RFX2	ENST00000535054.1|STARD10|ENSG00000214530.3|StAR-related lipid transfer (START) domain containing 10 	ENST00000545082.1|STARD10|ENSG00000214530.3|StAR-related lipid transfer (START) domain containing 10
hg19_v2_chr15_+_90234028_90234075	3.00403	RFX3_RFX2	ENST00000268130.7|WDR93|ENSG00000140527.10|WD repeat domain 93 	ENST00000560294.1|WDR93|ENSG00000140527.10|WD repeat domain 93 	ENST00000558000.1|WDR93|ENSG00000140527.10|WD repeat domain 93
hg19_v2_chr14_-_50864006_50864122	2.95806	RFX3_RFX2	ENST00000216378.2|CDKL1|ENSG00000100490.5|cyclin-dependent kinase-like 1 (CDC2-related kinase)
hg19_v2_chr1_+_160121356_160121363	2.92934	RFX3_RFX2	ENST00000368081.4|ATP1A4|ENSG00000132681.12|ATPase, Na+/K+ transporting, alpha 4 polypeptide
hg19_v2_chr5_+_121647877_121647913	2.917	RFX3_RFX2	ENST00000514497.2|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein 	ENST00000261367.7|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein
hg19_v2_chr6_+_30034966_30035030	2.8826	RFX3_RFX2	ENST00000376769.2|PPP1R11|ENSG00000204619.3|protein phosphatase 1, regulatory (inhibitor) subunit 11
hg19_v2_chr18_+_55711575_55711628	2.88133	RFX3_RFX2	ENST00000356462.6|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000400345.3|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000589054.1|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 	ENST00000256832.7|NEDD4L|ENSG00000049759.12|neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase
hg19_v2_chr18_+_51795774_51795984	2.85871	RFX3_RFX2	ENST00000579534.1|POLI|ENSG00000101751.6|polymerase (DNA directed) iota 	ENST00000406285.3|POLI|ENSG00000101751.6|polymerase (DNA directed) iota 	ENST00000577612.1|POLI|ENSG00000101751.6|polymerase (DNA directed) iota 	ENST00000579434.1|POLI|ENSG00000101751.6|polymerase (DNA directed) iota 	ENST00000583136.1|POLI|ENSG00000101751.6|polymerase (DNA directed) iota
hg19_v2_chr11_-_118122996_118123090	2.83811	RFX3_RFX2	ENST00000525386.1|MPZL3|ENSG00000160588.5|myelin protein zero-like 3 	ENST00000527472.1|MPZL3|ENSG00000160588.5|myelin protein zero-like 3 	ENST00000278949.4|MPZL3|ENSG00000160588.5|myelin protein zero-like 3
hg19_v2_chr2_-_203736452_203736466	2.82267	RFX3_RFX2	ENST00000419460.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like
hg19_v2_chr4_+_20702059_20702104	2.81864	RFX3_RFX2	ENST00000444671.2|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000510700.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000506745.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000514663.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000509469.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000515339.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000513861.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000502374.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000538990.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000511160.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000504630.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000513590.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000514292.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000502938.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000509625.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000505160.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000507634.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000513459.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000511089.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like
hg19_v2_chr22_-_44208137_44208219	2.79608	RFX3_RFX2	ENST00000262726.7|EFCAB6|ENSG00000186976.10|EF-hand calcium binding domain 6 	ENST00000356087.4|EFCAB6|ENSG00000186976.10|EF-hand calcium binding domain 6
hg19_v2_chr4_-_186733363_186733392	2.78972	RFX3_RFX2	ENST00000393523.2|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000393528.3|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2 	ENST00000449407.2|SORBS2|ENSG00000154556.13|sorbin and SH3 domain containing 2
hg19_v2_chr19_-_58609570_58609730	2.78567	RFX3_RFX2	ENST00000600845.1|ZSCAN18|ENSG00000121413.8|zinc finger and SCAN domain containing 18 	ENST00000240727.6|ZSCAN18|ENSG00000121413.8|zinc finger and SCAN domain containing 18 	ENST00000600897.1|ZSCAN18|ENSG00000121413.8|zinc finger and SCAN domain containing 18 	ENST00000421612.2|ZSCAN18|ENSG00000121413.8|zinc finger and SCAN domain containing 18 	ENST00000601063.1|ZSCAN18|ENSG00000121413.8|zinc finger and SCAN domain containing 18 	ENST00000601144.1|ZSCAN18|ENSG00000121413.8|zinc finger and SCAN domain containing 18
hg19_v2_chr22_-_44208070_44208107	2.73146	RFX3_RFX2	ENST00000396231.2|EFCAB6|ENSG00000186976.10|EF-hand calcium binding domain 6
hg19_v2_chr22_-_44208110_44208135	2.72668	RFX3_RFX2	ENST00000358439.4|EFCAB6|ENSG00000186976.10|EF-hand calcium binding domain 6
hg19_v2_chr5_+_121647764_121647876	2.70836	RFX3_RFX2	ENST00000261368.8|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein 	ENST00000379533.2|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein 	ENST00000379536.2|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein 	ENST00000379538.3|SNCAIP|ENSG00000064692.14|synuclein, alpha interacting protein
hg19_v2_chr11_-_72492903_72492966	2.66828	RFX3_RFX2	ENST00000537947.1|STARD10|ENSG00000214530.3|StAR-related lipid transfer (START) domain containing 10
hg19_v2_chr10_+_15139176_15139214	2.65557	RFX3_RFX2	ENST00000378203.1|RPP38|ENSG00000152464.10|ribonuclease P/MRP 38kDa subunit 	ENST00000378201.2|RPP38|ENSG00000152464.10|ribonuclease P/MRP 38kDa subunit
hg19_v2_chr12_+_49687425_49687485	2.6492	RFX3_RFX2	ENST00000257860.4|PRPH|ENSG00000135406.9|peripherin
hg19_v2_chr17_-_6554747_6554802	2.63713	RFX3_RFX2	ENST00000574128.1|MED31|ENSG00000108590.6|mediator complex subunit 31
hg19_v2_chr1_+_244998602_244998646	2.55373	RFX3_RFX2	ENST00000411948.2|COX20|ENSG00000203667.5|COX20 cytochrome C oxidase assembly factor
hg19_v2_chr12_+_51818555_51818574	2.5472	RFX3_RFX2	ENST00000453097.2|SLC4A8|ENSG00000050438.12|solute carrier family 4, sodium bicarbonate cotransporter, member 8
hg19_v2_chr2_-_220083076_220083161	2.5085	RFX3_RFX2	ENST00000295750.4|ABCB6|ENSG00000115657.8|ATP-binding cassette, sub-family B (MDR/TAP), member 6
hg19_v2_chr11_-_75017734_75017755	2.49364	RFX3_RFX2	ENST00000532525.1|ARRB1|ENSG00000137486.12|arrestin, beta 1
hg19_v2_chr3_-_138048682_138048728	2.47668	RFX3_RFX2	ENST00000383180.2|NME9|ENSG00000181322.9|NME/NM23 family member 9
hg19_v2_chr6_-_39693111_39693217	2.47347	RFX3_RFX2	ENST00000373215.3|KIF6|ENSG00000164627.13|kinesin family member 6 	ENST00000538893.1|KIF6|ENSG00000164627.13|kinesin family member 6 	ENST00000287152.7|KIF6|ENSG00000164627.13|kinesin family member 6 	ENST00000373216.3|KIF6|ENSG00000164627.13|kinesin family member 6
hg19_v2_chr5_+_122181128_122181144	2.43874	RFX3_RFX2	ENST00000261369.4|SNX24|ENSG00000064652.6|sorting nexin 24
hg19_v2_chr6_-_31782813_31782842	2.43149	RFX3_RFX2	ENST00000375654.4|HSPA1L|ENSG00000204390.8|heat shock 70kDa protein 1-like
hg19_v2_chr15_-_40074996_40075059	2.42473	RFX3_RFX2	ENST00000350221.3|FSIP1|ENSG00000150667.6|fibrous sheath interacting protein 1
hg19_v2_chr16_+_22516172_22516172	2.41515	RFX3_RFX2	ENST00000543407.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chr12_+_51818749_51818901	2.38762	RFX3_RFX2	ENST00000514353.3|SLC4A8|ENSG00000050438.12|solute carrier family 4, sodium bicarbonate cotransporter, member 8
hg19_v2_chr22_-_43485381_43485434	2.34791	RFX3_RFX2	ENST00000331018.7|TTLL1|ENSG00000100271.12|tubulin tyrosine ligase-like family, member 1 	ENST00000266254.7|TTLL1|ENSG00000100271.12|tubulin tyrosine ligase-like family, member 1 	ENST00000445824.1|TTLL1|ENSG00000100271.12|tubulin tyrosine ligase-like family, member 1
hg19_v2_chr20_-_8000426_8000476	2.33585	RFX3_RFX2	ENST00000527925.1|TMX4|ENSG00000125827.4|thioredoxin-related transmembrane protein 4 	ENST00000246024.2|TMX4|ENSG00000125827.4|thioredoxin-related transmembrane protein 4
hg19_v2_chr21_+_40817749_40817868	2.32341	RFX3_RFX2	ENST00000380637.3|SH3BGR|ENSG00000185437.9|SH3 domain binding glutamic acid-rich protein 	ENST00000380634.1|SH3BGR|ENSG00000185437.9|SH3 domain binding glutamic acid-rich protein 	ENST00000458295.1|SH3BGR|ENSG00000185437.9|SH3 domain binding glutamic acid-rich protein 	ENST00000440288.2|SH3BGR|ENSG00000185437.9|SH3 domain binding glutamic acid-rich protein 	ENST00000380631.1|SH3BGR|ENSG00000185437.9|SH3 domain binding glutamic acid-rich protein
hg19_v2_chr11_+_47600562_47600642	2.30944	RFX3_RFX2	ENST00000263774.4|NDUFS3|ENSG00000213619.5|NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase) 	ENST00000529276.1|NDUFS3|ENSG00000213619.5|NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase) 	ENST00000528192.1|NDUFS3|ENSG00000213619.5|NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase) 	ENST00000530295.1|NDUFS3|ENSG00000213619.5|NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase) 	ENST00000534208.1|NDUFS3|ENSG00000213619.5|NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase) 	ENST00000534716.2|NDUFS3|ENSG00000213619.5|NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)
hg19_v2_chr22_+_38219389_38219389	2.30637	RFX3_RFX2	ENST00000249041.2|GALR3|ENSG00000128310.2|galanin receptor 3
hg19_v2_chr16_-_21877629_21877629	2.29476	RFX3_RFX2	ENST00000544693.1|NPIPB4|ENSG00000185864.12|nuclear pore complex interacting protein family, member B4
hg19_v2_chr11_-_116643688_116643719	2.26356	RFX3_RFX2	ENST00000375445.3|BUD13|ENSG00000137656.7|BUD13 homolog (S. cerevisiae) 	ENST00000260210.4|BUD13|ENSG00000137656.7|BUD13 homolog (S. cerevisiae)
hg19_v2_chr1_+_74663896_74663984	2.24944	RFX3_RFX2	ENST00000370898.3|FPGT|ENSG00000254685.2|fucose-1-phosphate guanylyltransferase 	ENST00000557284.2|FPGT-TNNI3K|ENSG00000259030.2|FPGT-TNNI3K readthrough 	ENST00000467578.2|FPGT|ENSG00000254685.2|fucose-1-phosphate guanylyltransferase 	ENST00000370894.5|FPGT|ENSG00000254685.2|fucose-1-phosphate guanylyltransferase 	ENST00000482102.2|FPGT|ENSG00000254685.2|fucose-1-phosphate guanylyltransferase 	ENST00000609362.1|FPGT|ENSG00000254685.2|fucose-1-phosphate guanylyltransferase 	ENST00000370899.3|FPGT-TNNI3K|ENSG00000259030.2|FPGT-TNNI3K readthrough 	ENST00000370895.1|FPGT-TNNI3K|ENSG00000259030.2|FPGT-TNNI3K readthrough 	ENST00000534632.1|FPGT-TNNI3K|ENSG00000259030.2|FPGT-TNNI3K readthrough 	ENST00000370891.2|TNNI3K|ENSG00000116783.10|TNNI3 interacting kinase 	ENST00000370893.1|FPGT-TNNI3K|ENSG00000259030.2|FPGT-TNNI3K readthrough 	ENST00000534056.1|FPGT|ENSG00000254685.2|fucose-1-phosphate guanylyltransferase
hg19_v2_chr10_+_15139330_15139391	2.24828	RFX3_RFX2	ENST00000378202.5|RPP38|ENSG00000152464.10|ribonuclease P/MRP 38kDa subunit 	ENST00000378197.4|RPP38|ENSG00000152464.10|ribonuclease P/MRP 38kDa subunit
hg19_v2_chrX_-_48768913_48768946	2.24773	RFX3_RFX2	ENST00000376529.3|SLC35A2|ENSG00000102100.10|solute carrier family 35 (UDP-galactose transporter), member A2 	ENST00000247138.5|SLC35A2|ENSG00000102100.10|solute carrier family 35 (UDP-galactose transporter), member A2 	ENST00000413561.2|SLC35A2|ENSG00000102100.10|solute carrier family 35 (UDP-galactose transporter), member A2 	ENST00000452555.2|SLC35A2|ENSG00000102100.10|solute carrier family 35 (UDP-galactose transporter), member A2 	ENST00000445167.2|SLC35A2|ENSG00000102100.10|solute carrier family 35 (UDP-galactose transporter), member A2 	ENST00000376512.1|SLC35A2|ENSG00000102100.10|solute carrier family 35 (UDP-galactose transporter), member A2
hg19_v2_chr1_-_43637915_43637998	2.22884	RFX3_RFX2	ENST00000236051.2|EBNA1BP2|ENSG00000117395.6|EBNA1 binding protein 2
hg19_v2_chr1_-_109584608_109584712	2.20442	RFX3_RFX2	ENST00000400794.3|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000528747.1|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000369962.3|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000361054.3|WDR47|ENSG00000085433.11|WD repeat domain 47
hg19_v2_chr3_-_130745571_130745677	2.20226	RFX3_RFX2	ENST00000514044.1|ASTE1|ENSG00000034533.7|asteroid homolog 1 (Drosophila) 	ENST00000264992.3|ASTE1|ENSG00000034533.7|asteroid homolog 1 (Drosophila)
hg19_v2_chr21_+_38445539_38445596	2.19751	RFX3_RFX2	ENST00000418766.1|TTC3|ENSG00000182670.9|tetratricopeptide repeat domain 3 	ENST00000450533.1|TTC3|ENSG00000182670.9|tetratricopeptide repeat domain 3 	ENST00000438055.1|TTC3|ENSG00000182670.9|tetratricopeptide repeat domain 3 	ENST00000355666.1|TTC3|ENSG00000182670.9|tetratricopeptide repeat domain 3 	ENST00000540756.1|TTC3|ENSG00000182670.9|tetratricopeptide repeat domain 3 	ENST00000399010.1|TTC3|ENSG00000182670.9|tetratricopeptide repeat domain 3
hg19_v2_chr2_-_10588630_10588646	2.19399	RFX3_RFX2	ENST00000234111.4|ODC1|ENSG00000115758.8|ornithine decarboxylase 1
hg19_v2_chr1_+_111991474_111991558	2.19344	RFX3_RFX2	ENST00000369722.3|ATP5F1|ENSG00000116459.6|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1
hg19_v2_chr16_-_68404908_68404919	2.18083	RFX3_RFX2	ENST00000574662.1|SMPD3|ENSG00000103056.7|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
hg19_v2_chr12_+_70132632_70132687	2.13042	RFX3_RFX2	ENST00000378815.6|RAB3IP|ENSG00000127328.17|RAB3A interacting protein 	ENST00000483530.2|RAB3IP|ENSG00000127328.17|RAB3A interacting protein 	ENST00000325555.9|RAB3IP|ENSG00000127328.17|RAB3A interacting protein
hg19_v2_chr2_-_175869936_175869954	2.10143	RFX3_RFX2	ENST00000409900.3|CHN1|ENSG00000128656.9|chimerin 1
hg19_v2_chr4_+_95129061_95129198	2.07799	RFX3_RFX2	ENST00000354268.4|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr9_-_116061145_116061145	2.07687	RFX3_RFX2	ENST00000416588.2|RNF183|ENSG00000165188.9|ring finger protein 183
hg19_v2_chr7_-_35077653_35077653	2.07281	RFX3_RFX2	ENST00000310974.4|DPY19L1|ENSG00000173852.9|dpy-19-like 1 (C. elegans)
hg19_v2_chr2_-_203735586_203735769	2.05887	RFX3_RFX2	ENST00000454326.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like 	ENST00000432273.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like 	ENST00000450143.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like 	ENST00000411681.1|ICA1L|ENSG00000163596.12|islet cell autoantigen 1,69kDa-like
hg19_v2_chr7_+_21582638_21582833	2.02729	RFX3_RFX2	ENST00000409508.3|DNAH11|ENSG00000105877.13|dynein, axonemal, heavy chain 11 	ENST00000328843.6|DNAH11|ENSG00000105877.13|dynein, axonemal, heavy chain 11
hg19_v2_chr6_-_31940065_31940081	2.02501	RFX3_RFX2	ENST00000375349.3|DXO|ENSG00000204348.5|decapping exoribonuclease 	ENST00000337523.5|DXO|ENSG00000204348.5|decapping exoribonuclease
hg19_v2_chr22_-_50746001_50746026	1.98568	RFX3_RFX2	ENST00000359337.4|PLXNB2|ENSG00000196576.10|plexin B2
hg19_v2_chr1_+_36023370_36023461	1.96123	RFX3_RFX2	ENST00000356090.4|NCDN|ENSG00000020129.11|neurochondrin 	ENST00000373243.2|NCDN|ENSG00000020129.11|neurochondrin
hg19_v2_chr15_-_55700522_55700708	1.929	RFX3_RFX2	ENST00000564092.1|CCPG1|ENSG00000260916.1|cell cycle progression 1 	ENST00000310958.6|CCPG1|ENSG00000260916.1|cell cycle progression 1
hg19_v2_chr11_-_6426635_6426696	1.92179	RFX3_RFX2	ENST00000608645.1|APBB1|ENSG00000166313.14|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65) 	ENST00000608394.1|APBB1|ENSG00000166313.14|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65) 	ENST00000529519.1|APBB1|ENSG00000166313.14|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)
hg19_v2_chr17_+_41177220_41177282	1.89507	RFX3_RFX2	ENST00000587250.2|RND2|ENSG00000108830.7|Rho family GTPase 2 	ENST00000544533.1|RND2|ENSG00000108830.7|Rho family GTPase 2
hg19_v2_chr4_-_170924888_170924950	1.8879	RFX3_RFX2	ENST00000502832.1|MFAP3L|ENSG00000198948.7|microfibrillar-associated protein 3-like 	ENST00000393704.3|MFAP3L|ENSG00000198948.7|microfibrillar-associated protein 3-like
hg19_v2_chr6_-_121655593_121655661	1.85094	RFX3_RFX2	ENST00000398212.2|TBC1D32|ENSG00000146350.9|TBC1 domain family, member 32
hg19_v2_chr12_-_6716569_6716642	1.72458	RFX3_RFX2	ENST00000544040.1|CHD4|ENSG00000111642.10|chromodomain helicase DNA binding protein 4 	ENST00000545942.1|CHD4|ENSG00000111642.10|chromodomain helicase DNA binding protein 4
hg19_v2_chrX_+_117957741_117957758	1.71913	RFX3_RFX2	ENST00000310164.2|ZCCHC12|ENSG00000174460.3|zinc finger, CCHC domain containing 12
hg19_v2_chr16_-_71264558_71264638	1.71521	RFX3_RFX2	ENST00000448089.2|HYDIN|ENSG00000157423.13|HYDIN, axonemal central pair apparatus protein 	ENST00000393550.2|HYDIN|ENSG00000157423.13|HYDIN, axonemal central pair apparatus protein 	ENST00000448691.1|HYDIN|ENSG00000157423.13|HYDIN, axonemal central pair apparatus protein 	ENST00000393567.2|HYDIN|ENSG00000157423.13|HYDIN, axonemal central pair apparatus protein 	ENST00000321489.5|HYDIN|ENSG00000157423.13|HYDIN, axonemal central pair apparatus protein 	ENST00000539973.1|HYDIN|ENSG00000157423.13|HYDIN, axonemal central pair apparatus protein 	ENST00000288168.10|HYDIN|ENSG00000157423.13|HYDIN, axonemal central pair apparatus protein 	ENST00000545267.1|HYDIN|ENSG00000157423.13|HYDIN, axonemal central pair apparatus protein 	ENST00000541601.1|HYDIN|ENSG00000157423.13|HYDIN, axonemal central pair apparatus protein 	ENST00000538248.1|HYDIN|ENSG00000157423.13|HYDIN, axonemal central pair apparatus protein
hg19_v2_chr22_-_50218452_50218452	1.71238	RFX3_RFX2	ENST00000216267.8|BRD1|ENSG00000100425.14|bromodomain containing 1
hg19_v2_chr5_+_121297650_121297747	1.68539	RFX3_RFX2	ENST00000339397.4|SRFBP1|ENSG00000151304.5|serum response factor binding protein 1
hg19_v2_chr5_+_65440032_65440099	1.65358	RFX3_RFX2	ENST00000334121.6|SREK1|ENSG00000153914.11|splicing regulatory glutamine/lysine-rich protein 1
hg19_v2_chr11_+_74303575_74303606	1.646	RFX3_RFX2	ENST00000263681.2|POLD3|ENSG00000077514.4|polymerase (DNA-directed), delta 3, accessory subunit
hg19_v2_chr15_-_43785274_43785288	1.59745	RFX3_RFX2	ENST00000413546.1|TP53BP1|ENSG00000067369.9|tumor protein p53 binding protein 1
hg19_v2_chr8_-_68255912_68255952	1.57955	RFX3_RFX2	ENST00000262215.3|ARFGEF1|ENSG00000066777.4|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) 	ENST00000519436.1|ARFGEF1|ENSG00000066777.4|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)
hg19_v2_chr3_-_49055991_49056026	1.57893	RFX3_RFX2	ENST00000441576.2|DALRD3|ENSG00000178149.12|DALR anticodon binding domain containing 3 	ENST00000420952.2|DALRD3|ENSG00000178149.12|DALR anticodon binding domain containing 3 	ENST00000341949.4|DALRD3|ENSG00000178149.12|DALR anticodon binding domain containing 3 	ENST00000395462.4|DALRD3|ENSG00000178149.12|DALR anticodon binding domain containing 3
hg19_v2_chr4_+_2043777_2043790	1.5538	RFX3_RFX2	ENST00000409860.1|C4orf48|ENSG00000243449.2|chromosome 4 open reading frame 48
hg19_v2_chr14_-_57960545_57960595	1.53164	RFX3_RFX2	ENST00000526336.1|C14orf105|ENSG00000100557.5|chromosome 14 open reading frame 105 	ENST00000216445.3|C14orf105|ENSG00000100557.5|chromosome 14 open reading frame 105
hg19_v2_chr1_+_109656532_109656551	1.52243	RFX3_RFX2	ENST00000531664.1|KIAA1324|ENSG00000116299.12|KIAA1324 	ENST00000534476.1|KIAA1324|ENSG00000116299.12|KIAA1324
hg19_v2_chr6_-_159065741_159065795	1.52168	RFX3_RFX2	ENST00000367085.3|DYNLT1|ENSG00000146425.6|dynein, light chain, Tctex-type 1 	ENST00000367089.3|DYNLT1|ENSG00000146425.6|dynein, light chain, Tctex-type 1
hg19_v2_chr19_-_56826157_56826294	1.52139	RFX3_RFX2	ENST00000592509.1|ZSCAN5A|ENSG00000131848.5|zinc finger and SCAN domain containing 5A 	ENST00000592679.1|ZSCAN5A|ENSG00000131848.5|zinc finger and SCAN domain containing 5A 	ENST00000588442.1|ZSCAN5A|ENSG00000131848.5|zinc finger and SCAN domain containing 5A 	ENST00000593106.1|ZSCAN5A|ENSG00000131848.5|zinc finger and SCAN domain containing 5A 	ENST00000587492.1|ZSCAN5A|ENSG00000131848.5|zinc finger and SCAN domain containing 5A 	ENST00000254165.3|ZSCAN5A|ENSG00000131848.5|zinc finger and SCAN domain containing 5A
hg19_v2_chr14_+_102829300_102829332	1.4975	RFX3_RFX2	ENST00000359520.7|TECPR2|ENSG00000196663.11|tectonin beta-propeller repeat containing 2
hg19_v2_chr14_-_24664540_24664690	1.46521	RFX3_RFX2	ENST00000530563.1|TM9SF1|ENSG00000100926.10|transmembrane 9 superfamily member 1 	ENST00000528895.1|TM9SF1|ENSG00000100926.10|transmembrane 9 superfamily member 1 	ENST00000528669.1|TM9SF1|ENSG00000100926.10|transmembrane 9 superfamily member 1 	ENST00000532632.1|TM9SF1|ENSG00000100926.10|transmembrane 9 superfamily member 1
hg19_v2_chr15_-_65282274_65282281	1.46487	RFX3_RFX2	ENST00000204566.2|SPG21|ENSG00000090487.6|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v2_chr1_+_100810575_100810584	1.44625	RFX3_RFX2	ENST00000542213.1|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr8_-_114449112_114449328	1.43567	RFX3_RFX2	ENST00000455883.2|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3 	ENST00000352409.3|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3 	ENST00000297405.5|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3
hg19_v2_chr15_-_90234006_90234017	1.43521	RFX3_RFX2	ENST00000300056.3|PEX11A|ENSG00000166821.4|peroxisomal biogenesis factor 11 alpha 	ENST00000559170.1|PEX11A|ENSG00000166821.4|peroxisomal biogenesis factor 11 alpha
hg19_v2_chr2_-_230786679_230786758	1.41414	RFX3_RFX2	ENST00000543084.1|TRIP12|ENSG00000153827.9|thyroid hormone receptor interactor 12 	ENST00000343290.5|TRIP12|ENSG00000153827.9|thyroid hormone receptor interactor 12 	ENST00000389044.4|TRIP12|ENSG00000153827.9|thyroid hormone receptor interactor 12 	ENST00000283943.5|TRIP12|ENSG00000153827.9|thyroid hormone receptor interactor 12
hg19_v2_chr4_+_2043689_2043757	1.40176	RFX3_RFX2	ENST00000382878.3|C4orf48|ENSG00000243449.2|chromosome 4 open reading frame 48 	ENST00000409248.4|C4orf48|ENSG00000243449.2|chromosome 4 open reading frame 48
hg19_v2_chr22_-_30752861_30752936	1.39979	RFX3_RFX2	ENST00000439242.1|SF3A1|ENSG00000099995.14|splicing factor 3a, subunit 1, 120kDa 	ENST00000215793.8|SF3A1|ENSG00000099995.14|splicing factor 3a, subunit 1, 120kDa
hg19_v2_chr7_-_140340576_140340622	1.39619	RFX3_RFX2	ENST00000275884.6|DENND2A|ENSG00000146966.8|DENN/MADD domain containing 2A 	ENST00000475837.1|DENND2A|ENSG00000146966.8|DENN/MADD domain containing 2A
hg19_v2_chr17_-_8079632_8079639	1.38846	RFX3_RFX2	ENST00000431792.2|TMEM107|ENSG00000179029.10|transmembrane protein 107
hg19_v2_chr9_-_124922021_124922098	1.36678	RFX3_RFX2	ENST00000537618.1|NDUFA8|ENSG00000119421.5|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa 	ENST00000373768.3|NDUFA8|ENSG00000119421.5|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa
hg19_v2_chr1_-_45806053_45806142	1.35433	RFX3_RFX2	ENST00000412971.1|MUTYH|ENSG00000132781.13|mutY homolog 	ENST00000372098.3|MUTYH|ENSG00000132781.13|mutY homolog 	ENST00000372110.3|MUTYH|ENSG00000132781.13|mutY homolog 	ENST00000529984.1|MUTYH|ENSG00000132781.13|mutY homolog 	ENST00000528332.2|MUTYH|ENSG00000132781.13|mutY homolog 	ENST00000372115.3|MUTYH|ENSG00000132781.13|mutY homolog 	ENST00000450313.1|MUTYH|ENSG00000132781.13|mutY homolog
hg19_v2_chr21_-_38445011_38445200	1.34561	RFX3_RFX2	ENST00000464265.1|PIGP|ENSG00000185808.9|phosphatidylinositol glycan anchor biosynthesis, class P 	ENST00000399102.1|PIGP|ENSG00000185808.9|phosphatidylinositol glycan anchor biosynthesis, class P
hg19_v2_chr3_+_118864991_118865005	1.32637	RFX3_RFX2	ENST00000295622.1|C3orf30|ENSG00000163424.4|chromosome 3 open reading frame 30
hg19_v2_chr21_-_38445470_38445491	1.31243	RFX3_RFX2	ENST00000399098.1|PIGP|ENSG00000185808.9|phosphatidylinositol glycan anchor biosynthesis, class P
hg19_v2_chr16_-_23464459_23464533	1.3064	RFX3_RFX2	ENST00000307149.5|COG7|ENSG00000168434.8|component of oligomeric golgi complex 7
hg19_v2_chr1_-_109584716_109584762	1.29367	RFX3_RFX2	ENST00000531337.1|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000529074.1|WDR47|ENSG00000085433.11|WD repeat domain 47 	ENST00000369965.4|WDR47|ENSG00000085433.11|WD repeat domain 47
hg19_v2_chr2_-_153032484_153032537	1.28653	RFX3_RFX2	ENST00000263904.4|STAM2|ENSG00000115145.5|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2
hg19_v2_chr12_-_121790237_121790265	1.27861	RFX3_RFX2	ENST00000261819.3|ANAPC5|ENSG00000089053.8|anaphase promoting complex subunit 5
hg19_v2_chr5_+_92919043_92919082	1.27777	RFX3_RFX2	ENST00000327111.3|NR2F1|ENSG00000175745.7|nuclear receptor subfamily 2, group F, member 1
hg19_v2_chr4_+_95128996_95129056	1.27011	RFX3_RFX2	ENST00000457823.2|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr4_+_3076388_3076431	1.26573	RFX3_RFX2	ENST00000355072.5|HTT|ENSG00000197386.6|huntingtin
hg19_v2_chr3_+_196439275_196439290	1.24686	RFX3_RFX2	ENST00000296333.5|PIGX|ENSG00000163964.9|phosphatidylinositol glycan anchor biosynthesis, class X
hg19_v2_chr17_+_66508154_66508186	1.24446	RFX3_RFX2	ENST00000358598.2|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chr10_-_128210005_128210014	1.22829	RFX3_RFX2	ENST00000284694.7|C10orf90|ENSG00000154493.13|chromosome 10 open reading frame 90 	ENST00000454341.1|C10orf90|ENSG00000154493.13|chromosome 10 open reading frame 90 	ENST00000432642.1|C10orf90|ENSG00000154493.13|chromosome 10 open reading frame 90 	ENST00000392694.1|C10orf90|ENSG00000154493.13|chromosome 10 open reading frame 90
hg19_v2_chr9_-_4666421_4666492	1.22356	RFX3_RFX2	ENST00000381895.5|SPATA6L|ENSG00000106686.12|spermatogenesis associated 6-like
hg19_v2_chr4_+_95128748_95128794	1.22031	RFX3_RFX2	ENST00000359052.4|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr14_-_36278454_36278515	1.21053	RFX3_RFX2	ENST00000307138.6|RALGAPA1|ENSG00000174373.11|Ral GTPase activating protein, alpha subunit 1 (catalytic)
hg19_v2_chr12_-_6716534_6716557	1.20245	RFX3_RFX2	ENST00000544484.1|CHD4|ENSG00000111642.10|chromodomain helicase DNA binding protein 4 	ENST00000309577.6|CHD4|ENSG00000111642.10|chromodomain helicase DNA binding protein 4 	ENST00000357008.2|CHD4|ENSG00000111642.10|chromodomain helicase DNA binding protein 4
hg19_v2_chr1_+_110163202_110163276	1.09663	RFX3_RFX2	ENST00000531203.1|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2 	ENST00000256578.3|AMPD2|ENSG00000116337.11|adenosine monophosphate deaminase 2
hg19_v2_chr14_+_74416989_74417041	1.09274	RFX3_RFX2	ENST00000334571.2|COQ6|ENSG00000119723.11|coenzyme Q6 monooxygenase 	ENST00000554920.1|COQ6|ENSG00000119723.11|coenzyme Q6 monooxygenase
hg19_v2_chr10_-_119806085_119806114	1.08187	RFX3_RFX2	ENST00000355624.3|RAB11FIP2|ENSG00000107560.6|RAB11 family interacting protein 2 (class I)
hg19_v2_chr21_-_38445297_38445313	1.06437	RFX3_RFX2	ENST00000430792.1|PIGP|ENSG00000185808.9|phosphatidylinositol glycan anchor biosynthesis, class P 	ENST00000399103.1|PIGP|ENSG00000185808.9|phosphatidylinositol glycan anchor biosynthesis, class P
hg19_v2_chr8_+_9413410_9413451	1.04134	RFX3_RFX2	ENST00000520408.1|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 	ENST00000310430.6|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 	ENST00000522110.1|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
hg19_v2_chr1_-_21503337_21503407	1.0337	RFX3_RFX2	ENST00000400422.1|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3 	ENST00000602326.1|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3 	ENST00000411888.1|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3 	ENST00000438975.1|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3
hg19_v2_chr22_-_50746027_50746082	1.02611	RFX3_RFX2	ENST00000425954.1|PLXNB2|ENSG00000196576.10|plexin B2 	ENST00000449103.1|PLXNB2|ENSG00000196576.10|plexin B2
hg19_v2_chr22_-_43539346_43539410	1.00167	RFX3_RFX2	ENST00000327555.5|MCAT|ENSG00000100294.8|malonyl CoA:ACP acyltransferase (mitochondrial) 	ENST00000290429.6|MCAT|ENSG00000100294.8|malonyl CoA:ACP acyltransferase (mitochondrial)
hg19_v2_chr6_-_135818844_135818921	0.997491	RFX3_RFX2	ENST00000524469.1|AHI1|ENSG00000135541.16|Abelson helper integration site 1 	ENST00000367800.4|AHI1|ENSG00000135541.16|Abelson helper integration site 1 	ENST00000327035.6|AHI1|ENSG00000135541.16|Abelson helper integration site 1 	ENST00000457866.2|AHI1|ENSG00000135541.16|Abelson helper integration site 1 	ENST00000265602.6|AHI1|ENSG00000135541.16|Abelson helper integration site 1
hg19_v2_chr17_-_58499766_58499831	0.995017	RFX3_RFX2	ENST00000588898.1|USP32|ENSG00000170832.8|ubiquitin specific peptidase 32
hg19_v2_chr12_+_70132458_70132488	0.992852	RFX3_RFX2	ENST00000247833.7|RAB3IP|ENSG00000127328.17|RAB3A interacting protein
hg19_v2_chr2_-_97405775_97405816	0.983023	RFX3_RFX2	ENST00000264963.4|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000537039.1|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000377079.4|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000426463.2|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like 	ENST00000534882.1|LMAN2L|ENSG00000114988.7|lectin, mannose-binding 2-like
hg19_v2_chr21_-_46707793_46707815	0.975247	RFX3_RFX2	ENST00000331343.7|POFUT2|ENSG00000186866.12|protein O-fucosyltransferase 2 	ENST00000349485.5|POFUT2|ENSG00000186866.12|protein O-fucosyltransferase 2
hg19_v2_chr5_+_122181279_122181321	0.954442	RFX3_RFX2	ENST00000395451.4|SNX24|ENSG00000064652.6|sorting nexin 24 	ENST00000506996.1|SNX24|ENSG00000064652.6|sorting nexin 24
hg19_v2_chr1_-_205326022_205326074	0.952247	RFX3_RFX2	ENST00000367155.3|KLHDC8A|ENSG00000162873.10|kelch domain containing 8A
hg19_v2_chr7_-_123198284_123198329	0.933825	RFX3_RFX2	ENST00000355749.2|NDUFA5|ENSG00000128609.10|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
hg19_v2_chr5_+_177457525_177457537	0.927905	RFX3_RFX2	ENST00000511856.1|FAM153C|ENSG00000204677.6|family with sequence similarity 153, member C 	ENST00000511189.1|FAM153C|ENSG00000204677.6|family with sequence similarity 153, member C
hg19_v2_chr5_+_139554227_139554227	0.916595	RFX3_RFX2	ENST00000261811.4|CYSTM1|ENSG00000120306.5|cysteine-rich transmembrane module containing 1
hg19_v2_chr5_-_137090028_137090075	0.909685	RFX3_RFX2	ENST00000314940.4|HNRNPA0|ENSG00000177733.4|heterogeneous nuclear ribonucleoprotein A0
hg19_v2_chr12_-_121790187_121790201	0.909463	RFX3_RFX2	ENST00000544442.1|ANAPC5|ENSG00000089053.8|anaphase promoting complex subunit 5 	ENST00000541887.1|ANAPC5|ENSG00000089053.8|anaphase promoting complex subunit 5 	ENST00000539871.1|ANAPC5|ENSG00000089053.8|anaphase promoting complex subunit 5
hg19_v2_chr5_+_122181184_122181213	0.909399	RFX3_RFX2	ENST00000513881.1|SNX24|ENSG00000064652.6|sorting nexin 24
hg19_v2_chr8_+_103563792_103563808	0.904243	RFX3_RFX2	ENST00000285402.3|ODF1|ENSG00000155087.3|outer dense fiber of sperm tails 1
hg19_v2_chr12_-_64062241_64062357	0.896361	RFX3_RFX2	ENST00000538147.1|DPY19L2|ENSG00000177990.7|dpy-19-like 2 (C. elegans) 	ENST00000324472.4|DPY19L2|ENSG00000177990.7|dpy-19-like 2 (C. elegans)
hg19_v2_chr3_+_47844399_47844457	0.886698	RFX3_RFX2	ENST00000446256.2|DHX30|ENSG00000132153.10|DEAH (Asp-Glu-Ala-His) box helicase 30 	ENST00000445061.1|DHX30|ENSG00000132153.10|DEAH (Asp-Glu-Ala-His) box helicase 30
hg19_v2_chr1_-_205326161_205326218	0.875282	RFX3_RFX2	ENST00000367156.3|KLHDC8A|ENSG00000162873.10|kelch domain containing 8A 	ENST00000606887.1|KLHDC8A|ENSG00000162873.10|kelch domain containing 8A 	ENST00000607173.1|KLHDC8A|ENSG00000162873.10|kelch domain containing 8A
hg19_v2_chr14_-_36278412_36278437	0.874449	RFX3_RFX2	ENST00000389698.3|RALGAPA1|ENSG00000174373.11|Ral GTPase activating protein, alpha subunit 1 (catalytic) 	ENST00000258840.6|RALGAPA1|ENSG00000174373.11|Ral GTPase activating protein, alpha subunit 1 (catalytic)
hg19_v2_chr3_-_170587974_170587993	0.868577	RFX3_RFX2	ENST00000463836.1|RPL22L1|ENSG00000163584.13|ribosomal protein L22-like 1
hg19_v2_chr19_-_42759300_42759324	0.832704	RFX3_RFX2	ENST00000222329.4|ERF|ENSG00000105722.5|Ets2 repressor factor
hg19_v2_chr1_+_156119798_156119834	0.818399	RFX3_RFX2	ENST00000355014.2|SEMA4A|ENSG00000196189.8|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
hg19_v2_chr12_-_123011476_123011527	0.810462	RFX3_RFX2	ENST00000528279.1|RSRC2|ENSG00000111011.13|arginine/serine-rich coiled-coil 2 	ENST00000344591.4|RSRC2|ENSG00000111011.13|arginine/serine-rich coiled-coil 2 	ENST00000526560.2|RSRC2|ENSG00000111011.13|arginine/serine-rich coiled-coil 2
hg19_v2_chr17_+_66508537_66508650	0.771448	RFX3_RFX2	ENST00000392711.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000585427.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000589228.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000536854.2|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000588702.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000589309.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chr15_-_65281775_65281844	0.765022	RFX3_RFX2	ENST00000433215.2|SPG21|ENSG00000090487.6|spastic paraplegia 21 (autosomal recessive, Mast syndrome) 	ENST00000558415.1|SPG21|ENSG00000090487.6|spastic paraplegia 21 (autosomal recessive, Mast syndrome) 	ENST00000557795.1|SPG21|ENSG00000090487.6|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v2_chr19_-_57352064_57352102	0.725046	RFX3_RFX2	ENST00000326441.9|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000593695.1|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000599577.1|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000593711.1|ZIM2|ENSG00000269699.1|zinc finger, imprinted 2 	ENST00000594389.1|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000423103.2|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000598410.1|PEG3|ENSG00000198300.8|paternally expressed 3 	ENST00000391708.3|ZIM2|ENSG00000269699.1|zinc finger, imprinted 2 	ENST00000221722.5|ZIM2|ENSG00000269699.1|zinc finger, imprinted 2 	ENST00000599935.1|ZIM2|ENSG00000269699.1|zinc finger, imprinted 2
hg19_v2_chr1_+_4714792_4714861	0.708883	RFX3_RFX2	ENST00000378190.3|AJAP1|ENSG00000196581.6|adherens junctions associated protein 1
hg19_v2_chr6_+_43484760_43484850	0.708086	RFX3_RFX2	ENST00000372389.3|POLR1C|ENSG00000171453.13|polymerase (RNA) I polypeptide C, 30kDa 	ENST00000372344.2|POLR1C|ENSG00000171453.13|polymerase (RNA) I polypeptide C, 30kDa 	ENST00000304004.3|POLR1C|ENSG00000171453.13|polymerase (RNA) I polypeptide C, 30kDa 	ENST00000423780.1|POLR1C|ENSG00000171453.13|polymerase (RNA) I polypeptide C, 30kDa
hg19_v2_chr17_+_54671047_54671075	0.664406	RFX3_RFX2	ENST00000332822.4|NOG|ENSG00000183691.4|noggin
hg19_v2_chr6_-_70506963_70507003	0.63144	RFX3_RFX2	ENST00000370577.3|LMBRD1|ENSG00000168216.6|LMBR1 domain containing 1
hg19_v2_chr16_+_47495225_47495261	0.621701	RFX3_RFX2	ENST00000299167.8|PHKB|ENSG00000102893.11|phosphorylase kinase, beta 	ENST00000323584.5|PHKB|ENSG00000102893.11|phosphorylase kinase, beta 	ENST00000563376.1|PHKB|ENSG00000102893.11|phosphorylase kinase, beta
hg19_v2_chr17_-_6554877_6554954	0.617595	RFX3_RFX2	ENST00000225728.3|MED31|ENSG00000108590.6|mediator complex subunit 31 	ENST00000575197.1|MED31|ENSG00000108590.6|mediator complex subunit 31
hg19_v2_chr2_+_86669118_86669241	0.613828	RFX3_RFX2	ENST00000427678.1|KDM3A|ENSG00000115548.12|lysine (K)-specific demethylase 3A 	ENST00000542128.1|KDM3A|ENSG00000115548.12|lysine (K)-specific demethylase 3A
hg19_v2_chr17_-_7761172_7761209	0.608733	RFX3_RFX2	ENST00000333775.5|LSMD1|ENSG00000183011.9|LSM domain containing 1 	ENST00000575771.1|LSMD1|ENSG00000183011.9|LSM domain containing 1
hg19_v2_chr15_+_90777424_90777529	0.582676	RFX3_RFX2	ENST00000561433.1|GDPGP1|ENSG00000183208.8|GDP-D-glucose phosphorylase 1 	ENST00000559204.1|GDPGP1|ENSG00000183208.8|GDP-D-glucose phosphorylase 1 	ENST00000558291.1|GDPGP1|ENSG00000183208.8|GDP-D-glucose phosphorylase 1
hg19_v2_chr3_-_170588163_170588272	0.573822	RFX3_RFX2	ENST00000295830.8|RPL22L1|ENSG00000163584.13|ribosomal protein L22-like 1
hg19_v2_chr4_-_155511887_155511918	0.561073	RFX3_RFX2	ENST00000302053.3|FGA|ENSG00000171560.10|fibrinogen alpha chain 	ENST00000403106.3|FGA|ENSG00000171560.10|fibrinogen alpha chain
hg19_v2_chr7_-_140624499_140624568	0.549967	RFX3_RFX2	ENST00000288602.6|BRAF|ENSG00000157764.8|v-raf murine sarcoma viral oncogene homolog B
hg19_v2_chr19_-_633576_633597	0.526886	RFX3_RFX2	ENST00000588649.2|POLRMT|ENSG00000099821.9|polymerase (RNA) mitochondrial (DNA directed)
hg19_v2_chr12_+_2921788_2921872	0.520877	RFX3_RFX2	ENST00000228799.2|ITFG2|ENSG00000111203.7|integrin alpha FG-GAP repeat containing 2 	ENST00000419778.2|ITFG2|ENSG00000111203.7|integrin alpha FG-GAP repeat containing 2 	ENST00000542548.1|ITFG2|ENSG00000111203.7|integrin alpha FG-GAP repeat containing 2
hg19_v2_chr13_-_73356009_73356074	0.519917	RFX3_RFX2	ENST00000377780.4|DIS3|ENSG00000083520.10|DIS3 mitotic control homolog (S. cerevisiae) 	ENST00000377767.4|DIS3|ENSG00000083520.10|DIS3 mitotic control homolog (S. cerevisiae)
hg19_v2_chr18_-_32924372_32924430	0.497824	RFX3_RFX2	ENST00000261332.6|ZNF24|ENSG00000172466.11|zinc finger protein 24 	ENST00000399061.3|ZNF24|ENSG00000172466.11|zinc finger protein 24
hg19_v2_chr16_+_47495201_47495215	0.495573	RFX3_RFX2	ENST00000566044.1|PHKB|ENSG00000102893.11|phosphorylase kinase, beta 	ENST00000455779.1|PHKB|ENSG00000102893.11|phosphorylase kinase, beta
hg19_v2_chr7_-_123197733_123197890	0.475569	RFX3_RFX2	ENST00000470123.1|NDUFA5|ENSG00000128609.10|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5 	ENST00000471770.1|NDUFA5|ENSG00000128609.10|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
hg19_v2_chr19_-_58874112_58874214	0.473966	RFX3_RFX2	ENST00000311044.3|ZNF497|ENSG00000174586.6|zinc finger protein 497 	ENST00000595763.1|ZNF497|ENSG00000174586.6|zinc finger protein 497 	ENST00000425453.3|ZNF497|ENSG00000174586.6|zinc finger protein 497
hg19_v2_chr21_+_43919710_43919760	0.467067	RFX3_RFX2	ENST00000398341.3|SLC37A1|ENSG00000160190.9|solute carrier family 37 (glucose-6-phosphate transporter), member 1
hg19_v2_chrX_-_102941596_102941746	0.466946	RFX3_RFX2	ENST00000441076.2|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000422355.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000442614.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000422154.2|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2 	ENST00000451301.1|MORF4L2|ENSG00000123562.12|mortality factor 4 like 2
hg19_v2_chr15_-_41047421_41047534	0.444426	RFX3_RFX2	ENST00000560460.1|RMDN3|ENSG00000137824.11|regulator of microtubule dynamics 3 	ENST00000338376.3|RMDN3|ENSG00000137824.11|regulator of microtubule dynamics 3 	ENST00000560905.1|RMDN3|ENSG00000137824.11|regulator of microtubule dynamics 3
hg19_v2_chr1_+_32671236_32671280	0.428274	RFX3_RFX2	ENST00000537469.1|IQCC|ENSG00000160051.7|IQ motif containing C 	ENST00000291358.6|IQCC|ENSG00000160051.7|IQ motif containing C
hg19_v2_chr2_-_44588893_44589001	0.424987	RFX3_RFX2	ENST00000409272.1|PREPL|ENSG00000138078.11|prolyl endopeptidase-like 	ENST00000410081.1|PREPL|ENSG00000138078.11|prolyl endopeptidase-like 	ENST00000541738.1|PREPL|ENSG00000138078.11|prolyl endopeptidase-like
hg19_v2_chr3_-_52740012_52740091	0.421483	RFX3_RFX2	ENST00000407584.3|GLT8D1|ENSG00000016864.12|glycosyltransferase 8 domain containing 1 	ENST00000266014.5|GLT8D1|ENSG00000016864.12|glycosyltransferase 8 domain containing 1
hg19_v2_chr21_-_38445443_38445458	0.415302	RFX3_RFX2	ENST00000360525.4|PIGP|ENSG00000185808.9|phosphatidylinositol glycan anchor biosynthesis, class P
hg19_v2_chr9_+_131084815_131084844	0.413331	RFX3_RFX2	ENST00000300452.3|COQ4|ENSG00000167113.6|coenzyme Q4 	ENST00000609948.1|COQ4|ENSG00000167113.6|coenzyme Q4
hg19_v2_chr3_-_49823941_49823990	0.407042	RFX3_RFX2	ENST00000321599.4|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1 	ENST00000395238.1|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1 	ENST00000468463.1|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1 	ENST00000460540.1|IP6K1|ENSG00000176095.7|inositol hexakisphosphate kinase 1
hg19_v2_chr1_-_204380919_204380953	0.402426	RFX3_RFX2	ENST00000367188.4|PPP1R15B|ENSG00000158615.8|protein phosphatase 1, regulatory subunit 15B
hg19_v2_chr7_+_138916231_138916231	0.39848	RFX3_RFX2	ENST00000473989.3|UBN2|ENSG00000157741.10|ubinuclein 2 	ENST00000288561.8|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr19_+_9945962_9946023	0.398308	RFX3_RFX2	ENST00000587625.1|PIN1|ENSG00000127445.9|peptidylprolyl cis/trans isomerase, NIMA-interacting 1 	ENST00000247970.4|PIN1|ENSG00000127445.9|peptidylprolyl cis/trans isomerase, NIMA-interacting 1 	ENST00000588695.1|PIN1|ENSG00000127445.9|peptidylprolyl cis/trans isomerase, NIMA-interacting 1
hg19_v2_chr14_+_23842018_23842070	0.379121	RFX3_RFX2	ENST00000397242.2|IL25|ENSG00000166090.8|interleukin 25 	ENST00000329715.2|IL25|ENSG00000166090.8|interleukin 25
hg19_v2_chr1_-_159880159_159880159	0.364938	RFX3_RFX2	ENST00000599780.1|AL590560.1|ENSG00000269620.1|HCG1995379; Uncharacterized protein
hg19_v2_chr10_-_72043432_72043432	0.356389	RFX3_RFX2	ENST00000277942.6|NPFFR1|ENSG00000148734.7|neuropeptide FF receptor 1
hg19_v2_chr19_+_36266433_36266490	0.355726	RFX3_RFX2	ENST00000314737.5|ARHGAP33|ENSG00000004777.14|Rho GTPase activating protein 33
hg19_v2_chr19_-_58951496_58951589	0.355648	RFX3_RFX2	ENST00000254166.3|ZNF132|ENSG00000131849.10|zinc finger protein 132
hg19_v2_chr14_-_59932044_59932114	0.337571	RFX3_RFX2	ENST00000395116.1|GPR135|ENSG00000181619.11|G protein-coupled receptor 135
hg19_v2_chr3_-_118864893_118864915	0.33694	RFX3_RFX2	ENST00000354673.2|IGSF11|ENSG00000144847.8|immunoglobulin superfamily, member 11 	ENST00000425327.2|IGSF11|ENSG00000144847.8|immunoglobulin superfamily, member 11
hg19_v2_chr4_-_186125077_186125182	0.336224	RFX3_RFX2	ENST00000458385.2|KIAA1430|ENSG00000164323.8|KIAA1430 	ENST00000514798.1|KIAA1430|ENSG00000164323.8|KIAA1430 	ENST00000296775.6|KIAA1430|ENSG00000164323.8|KIAA1430
hg19_v2_chr1_-_3773747_3773793	0.327385	RFX3_RFX2	ENST00000428079.1|CEP104|ENSG00000116198.8|centrosomal protein 104kDa 	ENST00000378230.3|CEP104|ENSG00000116198.8|centrosomal protein 104kDa 	ENST00000378223.3|CEP104|ENSG00000116198.8|centrosomal protein 104kDa
hg19_v2_chr15_-_65282232_65282271	0.298181	RFX3_RFX2	ENST00000416889.2|SPG21|ENSG00000090487.6|spastic paraplegia 21 (autosomal recessive, Mast syndrome)
hg19_v2_chr10_+_15139394_15139419	0.282023	RFX3_RFX2	ENST00000441850.1|RPP38|ENSG00000152464.10|ribonuclease P/MRP 38kDa subunit
hg19_v2_chr4_+_186125391_186125391	0.269995	RFX3_RFX2	ENST00000504273.1|SNX25|ENSG00000109762.11|sorting nexin 25
hg19_v2_chr11_-_8680383_8680394	0.198664	RFX3_RFX2	ENST00000299550.6|TRIM66|ENSG00000166436.11|tripartite motif containing 66
hg19_v2_chr8_+_38965048_38965292	0.18584	RFX3_RFX2	ENST00000399831.3|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32 	ENST00000437682.2|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32 	ENST00000519315.1|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32 	ENST00000379907.4|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32 	ENST00000522506.1|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32
hg19_v2_chr5_-_157079372_157079395	0.160704	RFX3_RFX2	ENST00000311371.5|SOX30|ENSG00000039600.6|SRY (sex determining region Y)-box 30
hg19_v2_chr14_-_45431091_45431175	0.156986	RFX3_RFX2	ENST00000579157.1|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000396128.4|KLHL28|ENSG00000179454.9|kelch-like family member 28 	ENST00000556500.1|KLHL28|ENSG00000179454.9|kelch-like family member 28
hg19_v2_chr2_-_202222091_202222121	0.15293	RFX3_RFX2	ENST00000405148.2|ALS2CR12|ENSG00000155749.8|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 	ENST00000392257.3|ALS2CR12|ENSG00000155749.8|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 	ENST00000439709.1|ALS2CR12|ENSG00000155749.8|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12
hg19_v2_chr5_-_157079428_157079452	0.125743	RFX3_RFX2	ENST00000265007.6|SOX30|ENSG00000039600.6|SRY (sex determining region Y)-box 30
hg19_v2_chr1_+_3773825_3773855	0.112465	RFX3_RFX2	ENST00000378209.3|DFFB|ENSG00000169598.11|DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase) 	ENST00000338895.3|DFFB|ENSG00000169598.11|DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase) 	ENST00000378212.2|DFFB|ENSG00000169598.11|DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase) 	ENST00000341385.3|DFFB|ENSG00000169598.11|DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase)
hg19_v2_chr3_-_170587815_170587826	0.0856552	RFX3_RFX2	ENST00000466674.1|RPL22L1|ENSG00000163584.13|ribosomal protein L22-like 1
hg19_v2_chr1_+_15853308_15853413	0.0794329	RFX3_RFX2	ENST00000375838.1|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENST00000375847.3|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16 	ENST00000375849.1|DNAJC16|ENSG00000116138.8|DnaJ (Hsp40) homolog, subfamily C, member 16
hg19_v2_chr2_-_47403642_47403740	0.0576739	RFX3_RFX2	ENST00000456319.1|CALM2|ENSG00000143933.12|calmodulin 2 (phosphorylase kinase, delta) 	ENST00000409563.1|CALM2|ENSG00000143933.12|calmodulin 2 (phosphorylase kinase, delta) 	ENST00000272298.7|CALM2|ENSG00000143933.12|calmodulin 2 (phosphorylase kinase, delta)
hg19_v2_chr6_+_32146131_32146230	0.0513363	RFX3_RFX2	ENST00000375094.3|RNF5|ENSG00000204308.6|ring finger protein 5, E3 ubiquitin protein ligase
hg19_v2_chr1_+_67390578_67390698	0.0511758	RFX3_RFX2	ENST00000371018.3|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000355977.6|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000357692.2|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000401041.1|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000371016.1|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000371014.1|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator 	ENST00000371012.2|MIER1|ENSG00000198160.10|mesoderm induction early response 1, transcriptional regulator
hg19_v2_chr14_+_62229075_62229118	0.0364171	RFX3_RFX2	ENST00000216294.4|SNAPC1|ENSG00000023608.4|small nuclear RNA activating complex, polypeptide 1, 43kDa
hg19_v2_chr14_-_23540826_23540843	0.0336585	RFX3_RFX2	ENST00000357481.2|ACIN1|ENSG00000100813.10|apoptotic chromatin condensation inducer 1
