hg19_v2_chr5_-_35938674_35938881	5.5956	NKX1-2_RAX	ENST00000397366.1|CAPSL|ENSG00000152611.7|calcyphosine-like 	ENST00000513623.1|CAPSL|ENSG00000152611.7|calcyphosine-like 	ENST00000514524.1|CAPSL|ENSG00000152611.7|calcyphosine-like 	ENST00000397367.2|CAPSL|ENSG00000152611.7|calcyphosine-like
hg19_v2_chr12_+_7013897_7014045	3.58863	NKX1-2_RAX	ENST00000007969.8|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23 	ENST00000323702.5|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr12_+_7014064_7014075	3.57688	NKX1-2_RAX	ENST00000443597.2|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr12_+_7014126_7014192	2.80929	NKX1-2_RAX	ENST00000415834.1|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23 	ENST00000436789.1|LRRC23|ENSG00000010626.10|leucine rich repeat containing 23
hg19_v2_chr12_-_25348007_25348101	2.17341	NKX1-2_RAX	ENST00000354189.5|CASC1|ENSG00000118307.14|cancer susceptibility candidate 1 	ENST00000545133.1|CASC1|ENSG00000118307.14|cancer susceptibility candidate 1 	ENST00000554347.1|CASC1|ENSG00000118307.14|cancer susceptibility candidate 1 	ENST00000395987.3|CASC1|ENSG00000118307.14|cancer susceptibility candidate 1 	ENST00000320267.9|CASC1|ENSG00000118307.14|cancer susceptibility candidate 1 	ENST00000395990.2|CASC1|ENSG00000118307.14|cancer susceptibility candidate 1 	ENST00000537577.1|CASC1|ENSG00000118307.14|cancer susceptibility candidate 1
hg19_v2_chr13_+_36050881_36050887	2.05342	NKX1-2_RAX	ENST00000537702.1|NBEA|ENSG00000172915.14|neurobeachin
hg19_v2_chr5_-_20575959_20575997	1.33904	NKX1-2_RAX	ENST00000507958.1|CDH18|ENSG00000145526.7|cadherin 18, type 2
hg19_v2_chr11_+_71900703_71900725	1.17895	NKX1-2_RAX	ENST00000393681.2|FOLR1|ENSG00000110195.7|folate receptor 1 (adult)
hg19_v2_chr11_+_71900572_71900602	1.15483	NKX1-2_RAX	ENST00000312293.4|FOLR1|ENSG00000110195.7|folate receptor 1 (adult)
hg19_v2_chr4_-_25865159_25865382	1.12873	NKX1-2_RAX	ENST00000502949.1|SEL1L3|ENSG00000091490.6|sel-1 suppressor of lin-12-like 3 (C. elegans) 	ENST00000264868.5|SEL1L3|ENSG00000091490.6|sel-1 suppressor of lin-12-like 3 (C. elegans) 	ENST00000513691.1|SEL1L3|ENSG00000091490.6|sel-1 suppressor of lin-12-like 3 (C. elegans) 	ENST00000514872.1|SEL1L3|ENSG00000091490.6|sel-1 suppressor of lin-12-like 3 (C. elegans)
hg19_v2_chr4_+_77356248_77356295	1.12064	NKX1-2_RAX	ENST00000296043.6|SHROOM3|ENSG00000138771.10|shroom family member 3
hg19_v2_chr11_-_63376013_63376053	0.826103	NKX1-2_RAX	ENST00000540943.1|PLA2G16|ENSG00000176485.6|phospholipase A2, group XVI
hg19_v2_chr4_-_141348789_141348819	0.782912	NKX1-2_RAX	ENST00000414773.1|CLGN|ENSG00000153132.8|calmegin
hg19_v2_chr2_+_217524323_217524341	0.745338	NKX1-2_RAX	ENST00000456764.1|IGFBP2|ENSG00000115457.5|insulin-like growth factor binding protein 2, 36kDa
hg19_v2_chr16_-_28608364_28608377	0.740482	NKX1-2_RAX	ENST00000533150.1|SULT1A2|ENSG00000197165.6|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2
hg19_v2_chr1_+_201979645_201979721	0.67159	NKX1-2_RAX	ENST00000367284.5|ELF3|ENSG00000163435.11|E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 	ENST00000367283.3|ELF3|ENSG00000163435.11|E74-like factor 3 (ets domain transcription factor, epithelial-specific )
hg19_v2_chr16_-_28608424_28608435	0.653252	NKX1-2_RAX	ENST00000335715.4|SULT1A2|ENSG00000197165.6|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2
hg19_v2_chr14_+_74034310_74034345	0.608804	NKX1-2_RAX	ENST00000538782.1|ACOT2|ENSG00000119673.10|acyl-CoA thioesterase 2
hg19_v2_chr6_+_26402465_26402512	0.601319	NKX1-2_RAX	ENST00000476549.2|BTN3A1|ENSG00000026950.12|butyrophilin, subfamily 3, member A1 	ENST00000289361.6|BTN3A1|ENSG00000026950.12|butyrophilin, subfamily 3, member A1 	ENST00000450085.2|BTN3A1|ENSG00000026950.12|butyrophilin, subfamily 3, member A1 	ENST00000425234.2|BTN3A1|ENSG00000026950.12|butyrophilin, subfamily 3, member A1 	ENST00000427334.1|BTN3A1|ENSG00000026950.12|butyrophilin, subfamily 3, member A1 	ENST00000506698.1|BTN3A1|ENSG00000026950.12|butyrophilin, subfamily 3, member A1
hg19_v2_chr6_+_26440700_26440788	0.588684	NKX1-2_RAX	ENST00000494393.1|BTN3A3|ENSG00000111801.11|butyrophilin, subfamily 3, member A3 	ENST00000482451.1|BTN3A3|ENSG00000111801.11|butyrophilin, subfamily 3, member A3 	ENST00000244519.2|BTN3A3|ENSG00000111801.11|butyrophilin, subfamily 3, member A3 	ENST00000339789.4|BTN3A3|ENSG00000111801.11|butyrophilin, subfamily 3, member A3 	ENST00000471353.1|BTN3A3|ENSG00000111801.11|butyrophilin, subfamily 3, member A3 	ENST00000361232.3|BTN3A3|ENSG00000111801.11|butyrophilin, subfamily 3, member A3 	ENST00000487627.1|BTN3A3|ENSG00000111801.11|butyrophilin, subfamily 3, member A3 	ENST00000496719.1|BTN3A3|ENSG00000111801.11|butyrophilin, subfamily 3, member A3 	ENST00000490254.1|BTN3A3|ENSG00000111801.11|butyrophilin, subfamily 3, member A3 	ENST00000487272.1|BTN3A3|ENSG00000111801.11|butyrophilin, subfamily 3, member A3
hg19_v2_chr4_-_74486109_74486166	0.506126	NKX1-2_RAX	ENST00000395777.2|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr7_+_70597109_70597155	0.495212	NKX1-2_RAX	ENST00000333538.5|WBSCR17|ENSG00000185274.7|Williams-Beuren syndrome chromosome region 17
hg19_v2_chrX_+_77166172_77166261	0.45151	NKX1-2_RAX	ENST00000343533.5|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide 	ENST00000350425.4|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide 	ENST00000341514.6|ATP7A|ENSG00000165240.13|ATPase, Cu++ transporting, alpha polypeptide
hg19_v2_chr13_+_78315295_78315337	0.4254	NKX1-2_RAX	ENST00000351546.3|SLAIN1|ENSG00000139737.17|SLAIN motif family, member 1
hg19_v2_chr4_-_74486347_74486348	0.420583	NKX1-2_RAX	ENST00000342081.3|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr1_+_160370344_160370406	0.383448	NKX1-2_RAX	ENST00000368061.2|VANGL2|ENSG00000162738.5|VANGL planar cell polarity protein 2
hg19_v2_chr8_-_102803163_102803211	0.368539	NKX1-2_RAX	ENST00000523645.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000520346.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000220931.6|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000522448.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000522951.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000522252.1|NCALD|ENSG00000104490.13|neurocalcin delta 	ENST00000519098.1|NCALD|ENSG00000104490.13|neurocalcin delta
hg19_v2_chr11_-_62521614_62521660	0.36432	NKX1-2_RAX	ENST00000527994.1|ZBTB3|ENSG00000185670.7|zinc finger and BTB domain containing 3 	ENST00000394807.3|ZBTB3|ENSG00000185670.7|zinc finger and BTB domain containing 3
hg19_v2_chr3_-_105587879_105587892	0.363555	NKX1-2_RAX	ENST00000264122.4|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000403724.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000405772.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr3_+_186560462_186560473	0.360817	NKX1-2_RAX	ENST00000412955.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing
hg19_v2_chr3_+_186560476_186560505	0.359944	NKX1-2_RAX	ENST00000320741.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing 	ENST00000444204.2|ADIPOQ|ENSG00000181092.5|adiponectin, C1Q and collagen domain containing
hg19_v2_chr5_-_102898465_102898518	0.349366	NKX1-2_RAX	ENST00000507423.1|NUDT12|ENSG00000112874.5|nudix (nucleoside diphosphate linked moiety X)-type motif 12 	ENST00000230792.2|NUDT12|ENSG00000112874.5|nudix (nucleoside diphosphate linked moiety X)-type motif 12
hg19_v2_chr3_+_195447738_195447761	0.342649	NKX1-2_RAX	ENST00000447234.2|MUC20|ENSG00000176945.12|mucin 20, cell surface associated 	ENST00000320736.6|MUC20|ENSG00000176945.12|mucin 20, cell surface associated 	ENST00000436408.1|MUC20|ENSG00000176945.12|mucin 20, cell surface associated
hg19_v2_chr3_-_114790179_114790222	0.34194	NKX1-2_RAX	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr8_-_101571933_101571939	0.338001	NKX1-2_RAX	ENST00000520311.1|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46
hg19_v2_chr1_+_100818156_100818210	0.334787	NKX1-2_RAX	ENST00000336454.3|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr2_+_24714729_24714927	0.315168	NKX1-2_RAX	ENST00000406961.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1 	ENST00000405141.1|NCOA1|ENSG00000084676.11|nuclear receptor coactivator 1
hg19_v2_chr8_-_101571964_101572017	0.301298	NKX1-2_RAX	ENST00000520552.1|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000521345.1|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000523000.1|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000335659.3|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000358990.3|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46 	ENST00000519597.1|ANKRD46|ENSG00000186106.7|ankyrin repeat domain 46
hg19_v2_chr17_+_57232690_57232860	0.295149	NKX1-2_RAX	ENST00000262293.4|PRR11|ENSG00000068489.8|proline rich 11
hg19_v2_chr1_+_28261492_28261516	0.29115	NKX1-2_RAX	ENST00000373894.3|SMPDL3B|ENSG00000130768.10|sphingomyelin phosphodiesterase, acid-like 3B
hg19_v2_chrX_+_77154935_77155012	0.280924	NKX1-2_RAX	ENST00000481445.1|COX7B|ENSG00000131174.4|cytochrome c oxidase subunit VIIb
hg19_v2_chr1_-_190446759_190446774	0.278403	NKX1-2_RAX	ENST00000367462.3|BRINP3|ENSG00000162670.8|bone morphogenetic protein/retinoic acid inducible neural-specific 3
hg19_v2_chr3_-_11685345_11685432	0.270437	NKX1-2_RAX	ENST00000430365.2|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila)
hg19_v2_chr16_-_28937027_28937073	0.261655	NKX1-2_RAX	ENST00000358201.4|RABEP2|ENSG00000177548.8|rabaptin, RAB GTPase binding effector protein 2
hg19_v2_chr20_+_43990576_43990596	0.242701	NKX1-2_RAX	ENST00000372727.1|SYS1|ENSG00000204070.5|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) 	ENST00000414310.1|SYS1|ENSG00000204070.5|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
hg19_v2_chr7_+_138145076_138145116	0.238423	NKX1-2_RAX	ENST00000343526.4|TRIM24|ENSG00000122779.12|tripartite motif containing 24
hg19_v2_chr20_-_29978286_29978310	0.237047	NKX1-2_RAX	ENST00000376315.2|DEFB119|ENSG00000180483.6|defensin, beta 119
hg19_v2_chr6_-_167040731_167040745	0.235812	NKX1-2_RAX	ENST00000265678.4|RPS6KA2|ENSG00000071242.7|ribosomal protein S6 kinase, 90kDa, polypeptide 2
hg19_v2_chr9_-_5339873_5339881	0.23548	NKX1-2_RAX	ENST00000223862.1|RLN1|ENSG00000107018.6|relaxin 1 	ENST00000223858.4|RLN1|ENSG00000107018.6|relaxin 1
hg19_v2_chr6_+_52442083_52442127	0.234571	NKX1-2_RAX	ENST00000606714.1|TRAM2-AS1|ENSG00000225791.2|TRAM2 antisense RNA 1 (head to head)
hg19_v2_chr4_-_66536196_66536216	0.234369	NKX1-2_RAX	ENST00000511294.1|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr7_+_99717230_99717321	0.229376	NKX1-2_RAX	ENST00000262932.3|CNPY4|ENSG00000166997.3|canopy FGF signaling regulator 4
hg19_v2_chr6_+_26402517_26402535	0.228877	NKX1-2_RAX	ENST00000414912.2|BTN3A1|ENSG00000026950.12|butyrophilin, subfamily 3, member A1
hg19_v2_chr6_+_26365443_26365503	0.227324	NKX1-2_RAX	ENST00000527422.1|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000356386.2|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000396934.3|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000377708.2|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000396948.1|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000508906.2|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2
hg19_v2_chrX_-_13835147_13835224	0.220122	NKX1-2_RAX	ENST00000493677.1|GPM6B|ENSG00000046653.10|glycoprotein M6B 	ENST00000355135.2|GPM6B|ENSG00000046653.10|glycoprotein M6B
hg19_v2_chr6_+_26501449_26501449	0.207563	NKX1-2_RAX	ENST00000244513.6|BTN1A1|ENSG00000124557.8|butyrophilin, subfamily 1, member A1
hg19_v2_chr8_-_135522425_135522486	0.202968	NKX1-2_RAX	ENST00000521673.1|ZFAT|ENSG00000066827.11|zinc finger and AT hook domain containing
hg19_v2_chr7_-_87856280_87856298	0.191095	NKX1-2_RAX	ENST00000490437.1|SRI|ENSG00000075142.9|sorcin 	ENST00000431660.1|SRI|ENSG00000075142.9|sorcin
hg19_v2_chr4_-_74486217_74486273	0.190433	NKX1-2_RAX	ENST00000335049.5|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6 	ENST00000307439.5|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr7_-_87856303_87856312	0.183629	NKX1-2_RAX	ENST00000394641.3|SRI|ENSG00000075142.9|sorcin
hg19_v2_chr16_+_53133070_53133081	0.182701	NKX1-2_RAX	ENST00000565832.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr3_+_140396881_140396887	0.179459	NKX1-2_RAX	ENST00000286349.3|TRIM42|ENSG00000155890.3|tripartite motif containing 42
hg19_v2_chr1_+_100818009_100818072	0.177065	NKX1-2_RAX	ENST00000370125.2|CDC14A|ENSG00000079335.13|cell division cycle 14A 	ENST00000361544.6|CDC14A|ENSG00000079335.13|cell division cycle 14A 	ENST00000370124.3|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr2_-_239197201_239197212	0.176278	NKX1-2_RAX	ENST00000254658.3|PER2|ENSG00000132326.7|period circadian clock 2
hg19_v2_chr5_+_63802109_63802139	0.175381	NKX1-2_RAX	ENST00000334025.2|RGS7BP|ENSG00000186479.4|regulator of G-protein signaling 7 binding protein
hg19_v2_chr11_-_124981475_124981659	0.173695	NKX1-2_RAX	ENST00000532156.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000532407.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000279968.4|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000527766.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529583.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000524373.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000527271.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000526175.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529609.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000533273.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000531909.1|TMEM218|ENSG00000150433.5|transmembrane protein 218 	ENST00000529530.1|TMEM218|ENSG00000150433.5|transmembrane protein 218
hg19_v2_chr11_-_59383617_59383617	0.169585	NKX1-2_RAX	ENST00000263847.1|OSBP|ENSG00000110048.7|oxysterol binding protein
hg19_v2_chr7_-_86849883_86849910	0.164796	NKX1-2_RAX	ENST00000433078.1|TMEM243|ENSG00000135185.7|transmembrane protein 243, mitochondrial
hg19_v2_chr12_-_23737534_23737550	0.163651	NKX1-2_RAX	ENST00000396007.2|SOX5|ENSG00000134532.11|SRY (sex determining region Y)-box 5
hg19_v2_chr2_-_239197238_239197256	0.157801	NKX1-2_RAX	ENST00000254657.3|PER2|ENSG00000132326.7|period circadian clock 2
hg19_v2_chr5_-_82969405_82969556	0.146545	NKX1-2_RAX	ENST00000510978.1|HAPLN1|ENSG00000145681.6|hyaluronan and proteoglycan link protein 1
hg19_v2_chr8_+_107738240_107738340	0.146535	NKX1-2_RAX	ENST00000449762.2|OXR1|ENSG00000164830.13|oxidation resistance 1 	ENST00000297447.6|OXR1|ENSG00000164830.13|oxidation resistance 1
hg19_v2_chrX_+_130192318_130192331	0.140435	NKX1-2_RAX	ENST00000370922.1|ARHGAP36|ENSG00000147256.6|Rho GTPase activating protein 36
hg19_v2_chr9_-_3469181_3469181	0.134855	NKX1-2_RAX	ENST00000366116.2|AL365202.1|ENSG00000203286.4|Uncharacterized protein
hg19_v2_chr17_-_41466555_41466600	0.134741	NKX1-2_RAX	ENST00000586231.1|LINC00910|ENSG00000188825.9|long intergenic non-protein coding RNA 910
hg19_v2_chr8_+_105235572_105235610	0.133196	NKX1-2_RAX	ENST00000523362.1|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2
hg19_v2_chr7_-_99717463_99717483	0.129792	NKX1-2_RAX	ENST00000437822.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg19_v2_chr4_-_66536057_66536071	0.113714	NKX1-2_RAX	ENST00000273854.3|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr1_-_151804314_151804348	0.109166	NKX1-2_RAX	ENST00000318247.6|RORC|ENSG00000143365.12|RAR-related orphan receptor C
hg19_v2_chr5_-_159546396_159546470	0.108727	NKX1-2_RAX	ENST00000523662.1|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A 	ENST00000456329.3|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A 	ENST00000307063.7|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A
hg19_v2_chrX_-_8139308_8139308	0.105126	NKX1-2_RAX	ENST00000317103.4|VCX2|ENSG00000177504.9|variable charge, X-linked 2
hg19_v2_chr4_-_103748880_103749047	0.104727	NKX1-2_RAX	ENST00000453744.2|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3 	ENST00000349311.8|UBE2D3|ENSG00000109332.15|ubiquitin-conjugating enzyme E2D 3
hg19_v2_chr3_+_23851928_23851951	0.102876	NKX1-2_RAX	ENST00000467766.1|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1 	ENST00000424381.1|UBE2E1|ENSG00000170142.7|ubiquitin-conjugating enzyme E2E 1
hg19_v2_chrX_-_6453159_6453159	0.100824	NKX1-2_RAX	ENST00000381089.3|VCX3A|ENSG00000169059.8|variable charge, X-linked 3A 	ENST00000398729.1|VCX3A|ENSG00000169059.8|variable charge, X-linked 3A
hg19_v2_chr12_-_74686314_74686425	0.0972037	NKX1-2_RAX	ENST00000551210.1|RP11-81H3.2|ENSG00000251138.2|RP11-81H3.2	ENST00000515416.2|RP11-81H3.2|ENSG00000251138.2|RP11-81H3.2	ENST00000549905.1|RP11-81H3.2|ENSG00000251138.2|RP11-81H3.2
hg19_v2_chr11_+_22689648_22689665	0.0904712	NKX1-2_RAX	ENST00000278187.3|GAS2|ENSG00000148935.6|growth arrest-specific 2
hg19_v2_chr14_+_55493920_55494013	0.0861227	NKX1-2_RAX	ENST00000395472.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4 	ENST00000555846.1|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chr14_+_55494323_55494345	0.0855542	NKX1-2_RAX	ENST00000339298.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chr14_+_22670455_22670477	0.0840898	NKX1-2_RAX	ENST00000390460.1|TRAV26-2|ENSG00000211812.1|T cell receptor alpha variable 26-2
hg19_v2_chr10_+_24755416_24755470	0.0796005	NKX1-2_RAX	ENST00000396446.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000396445.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000376451.2|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr3_+_158519654_158519944	0.0791783	NKX1-2_RAX	ENST00000415822.2|MFSD1|ENSG00000118855.14|major facilitator superfamily domain containing 1 	ENST00000392813.4|MFSD1|ENSG00000118855.14|major facilitator superfamily domain containing 1 	ENST00000264266.8|MFSD1|ENSG00000118855.14|major facilitator superfamily domain containing 1
hg19_v2_chrM_+_9207_9255	0.0784482	NKX1-2_RAX	ENST00000362079.2|MT-CO3|ENSG00000198938.2|mitochondrially encoded cytochrome c oxidase III
hg19_v2_chr11_+_112047087_112047123	0.0749442	NKX1-2_RAX	ENST00000526088.1|BCO2|ENSG00000197580.7|beta-carotene oxygenase 2 	ENST00000532593.1|BCO2|ENSG00000197580.7|beta-carotene oxygenase 2 	ENST00000531169.1|BCO2|ENSG00000197580.7|beta-carotene oxygenase 2
hg19_v2_chr8_+_107738343_107738413	0.0730236	NKX1-2_RAX	ENST00000521592.1|OXR1|ENSG00000164830.13|oxidation resistance 1
hg19_v2_chr14_+_22465771_22465783	0.0723644	NKX1-2_RAX	ENST00000390445.2|TRAV17|ENSG00000211797.2|T cell receptor alpha variable 17
hg19_v2_chr11_-_102651343_102651365	0.0722701	NKX1-2_RAX	ENST00000279441.4|MMP10|ENSG00000166670.5|matrix metallopeptidase 10 (stromelysin 2) 	ENST00000539681.1|MMP10|ENSG00000166670.5|matrix metallopeptidase 10 (stromelysin 2)
hg19_v2_chr17_-_4938712_4938733	0.0714815	NKX1-2_RAX	ENST00000254853.5|SLC52A1|ENSG00000132517.10|solute carrier family 52 (riboflavin transporter), member 1 	ENST00000424747.1|SLC52A1|ENSG00000132517.10|solute carrier family 52 (riboflavin transporter), member 1
hg19_v2_chr1_+_153747746_153747798	0.0620672	NKX1-2_RAX	ENST00000368661.3|SLC27A3|ENSG00000143554.9|solute carrier family 27 (fatty acid transporter), member 3
hg19_v2_chr9_+_34646651_34646689	0.0592421	NKX1-2_RAX	ENST00000378842.3|GALT|ENSG00000213930.7|galactose-1-phosphate uridylyltransferase
hg19_v2_chr11_-_13011081_13011102	0.0588628	NKX1-2_RAX	ENST00000532541.1|LINC00958|ENSG00000251381.2|long intergenic non-protein coding RNA 958 	ENST00000526388.1|LINC00958|ENSG00000251381.2|long intergenic non-protein coding RNA 958 	ENST00000534477.1|LINC00958|ENSG00000251381.2|long intergenic non-protein coding RNA 958 	ENST00000531402.1|LINC00958|ENSG00000251381.2|long intergenic non-protein coding RNA 958 	ENST00000527945.1|LINC00958|ENSG00000251381.2|long intergenic non-protein coding RNA 958 	ENST00000504230.2|LINC00958|ENSG00000251381.2|long intergenic non-protein coding RNA 958
hg19_v2_chr3_-_191000172_191000209	0.0584004	NKX1-2_RAX	ENST00000427544.2|UTS2B|ENSG00000188958.5|urotensin 2B
hg19_v2_chr12_+_112279782_112279871	0.0563364	NKX1-2_RAX	ENST00000550735.2|MAPKAPK5|ENSG00000089022.9|mitogen-activated protein kinase-activated protein kinase 5
hg19_v2_chr2_-_220264703_220264744	0.0527289	NKX1-2_RAX	ENST00000519905.1|DNPEP|ENSG00000123992.14|aspartyl aminopeptidase 	ENST00000523282.1|DNPEP|ENSG00000123992.14|aspartyl aminopeptidase 	ENST00000434339.1|DNPEP|ENSG00000123992.14|aspartyl aminopeptidase 	ENST00000457935.1|DNPEP|ENSG00000123992.14|aspartyl aminopeptidase
hg19_v2_chr19_-_46285736_46285754	0.0501905	NKX1-2_RAX	ENST00000291270.4|DMPK|ENSG00000104936.13|dystrophia myotonica-protein kinase 	ENST00000447742.2|DMPK|ENSG00000104936.13|dystrophia myotonica-protein kinase 	ENST00000354227.5|DMPK|ENSG00000104936.13|dystrophia myotonica-protein kinase
hg19_v2_chr12_-_112279694_112279710	0.0495065	NKX1-2_RAX	ENST00000443596.1|MAPKAPK5-AS1|ENSG00000234608.3|MAPKAPK5 antisense RNA 1 	ENST00000442119.1|MAPKAPK5-AS1|ENSG00000234608.3|MAPKAPK5 antisense RNA 1
hg19_v2_chrX_+_19362011_19362122	0.0474665	NKX1-2_RAX	ENST00000379806.5|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000545074.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000540249.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000423505.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000417819.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000422285.2|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000355808.5|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1 	ENST00000379805.3|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1
hg19_v2_chr7_-_7575477_7575491	0.0454057	NKX1-2_RAX	ENST00000399429.3|COL28A1|ENSG00000215018.5|collagen, type XXVIII, alpha 1
hg19_v2_chr4_+_110736659_110736709	0.045008	NKX1-2_RAX	ENST00000394631.3|GAR1|ENSG00000109534.12|GAR1 ribonucleoprotein 	ENST00000226796.6|GAR1|ENSG00000109534.12|GAR1 ribonucleoprotein
hg19_v2_chrX_-_21676442_21676453	0.0406232	NKX1-2_RAX	ENST00000379499.2|KLHL34|ENSG00000185915.4|kelch-like family member 34
hg19_v2_chr17_-_10372875_10372876	0.0403121	NKX1-2_RAX	ENST00000255381.2|MYH4|ENSG00000264424.1|myosin, heavy chain 4, skeletal muscle
hg19_v2_chr11_+_5710919_5710932	0.0402815	NKX1-2_RAX	ENST00000379965.3|TRIM22|ENSG00000132274.11|tripartite motif containing 22 	ENST00000425490.1|TRIM22|ENSG00000132274.11|tripartite motif containing 22
hg19_v2_chr7_-_99716952_99717021	0.0363649	NKX1-2_RAX	ENST00000523306.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000344095.4|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000417349.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000493322.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000520135.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000418432.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000460673.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000452041.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000452438.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000451699.1|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa 	ENST00000453269.2|TAF6|ENSG00000106290.10|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
hg19_v2_chr2_-_198540719_198540748	0.0356698	NKX1-2_RAX	ENST00000295049.4|RFTN2|ENSG00000162944.6|raftlin family member 2
hg19_v2_chr2_-_89597542_89597542	0.0349743	NKX1-2_RAX	ENST00000465170.1|IGKV1-37|ENSG00000239862.1|immunoglobulin kappa variable 1-37 (non-functional)
hg19_v2_chr9_+_34646624_34646649	0.0339206	NKX1-2_RAX	ENST00000450095.2|GALT|ENSG00000213930.7|galactose-1-phosphate uridylyltransferase 	ENST00000556278.1|GALT|ENSG00000258728.1|Uncharacterized protein
hg19_v2_chr6_+_154360357_154360443	0.0284117	NKX1-2_RAX	ENST00000330432.7|OPRM1|ENSG00000112038.13|opioid receptor, mu 1 	ENST00000360422.4|OPRM1|ENSG00000112038.13|opioid receptor, mu 1
hg19_v2_chr10_-_92681033_92681033	0.0267078	NKX1-2_RAX	ENST00000371697.3|ANKRD1|ENSG00000148677.6|ankyrin repeat domain 1 (cardiac muscle)
hg19_v2_chr1_-_92952433_92952489	0.0255844	NKX1-2_RAX	ENST00000294702.5|GFI1|ENSG00000162676.7|growth factor independent 1 transcription repressor
hg19_v2_chr1_+_43148059_43148111	0.024653	NKX1-2_RAX	ENST00000321358.7|YBX1|ENSG00000065978.13|Y box binding protein 1 	ENST00000332220.6|YBX1|ENSG00000065978.13|Y box binding protein 1
hg19_v2_chr19_+_54641444_54641504	0.022108	NKX1-2_RAX	ENST00000221232.5|CNOT3|ENSG00000088038.13|CCR4-NOT transcription complex, subunit 3 	ENST00000358389.3|CNOT3|ENSG00000088038.13|CCR4-NOT transcription complex, subunit 3
hg19_v2_chr17_-_38821373_38821440	0.0183028	NKX1-2_RAX	ENST00000394052.3|KRT222|ENSG00000213424.4|keratin 222
hg19_v2_chr10_-_114206649_114206688	0.0169024	NKX1-2_RAX	ENST00000369404.3|ZDHHC6|ENSG00000023041.7|zinc finger, DHHC-type containing 6 	ENST00000369405.3|ZDHHC6|ENSG00000023041.7|zinc finger, DHHC-type containing 6
hg19_v2_chr1_+_153746683_153746830	0.0148483	NKX1-2_RAX	ENST00000271857.2|SLC27A3|ENSG00000143554.9|solute carrier family 27 (fatty acid transporter), member 3
hg19_v2_chr7_+_21582638_21582833	0.0139407	NKX1-2_RAX	ENST00000409508.3|DNAH11|ENSG00000105877.13|dynein, axonemal, heavy chain 11 	ENST00000328843.6|DNAH11|ENSG00000105877.13|dynein, axonemal, heavy chain 11
hg19_v2_chr8_+_9413410_9413451	0.0118869	NKX1-2_RAX	ENST00000520408.1|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 	ENST00000310430.6|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 	ENST00000522110.1|TNKS|ENSG00000173273.11|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
hg19_v2_chr12_+_16500571_16500598	0.010736	NKX1-2_RAX	ENST00000543076.1|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1 	ENST00000396210.3|MGST1|ENSG00000008394.8|microsomal glutathione S-transferase 1
hg19_v2_chr17_-_39341594_39341594	0.00885749	NKX1-2_RAX	ENST00000398472.1|KRTAP4-1|ENSG00000198443.5|keratin associated protein 4-1
hg19_v2_chr5_+_66300446_66300463	0.00620651	NKX1-2_RAX	ENST00000261569.7|MAST4|ENSG00000069020.14|microtubule associated serine/threonine kinase family member 4
hg19_v2_chr1_-_17766198_17766232	0.00243514	NKX1-2_RAX	ENST00000375436.4|RCC2|ENSG00000179051.9|regulator of chromosome condensation 2
hg19_v2_chr2_-_86422095_86422126	0.000212108	NKX1-2_RAX	ENST00000254636.5|IMMT|ENSG00000132305.16|inner membrane protein, mitochondrial
