hg19_v2_chr17_-_38859996_38860010	1.77001	LHX2	ENST00000264651.2|KRT24|ENSG00000167916.4|keratin 24
hg19_v2_chr18_+_29027696_29027774	1.30474	LHX2	ENST00000257189.4|DSG3|ENSG00000134757.4|desmoglein 3
hg19_v2_chr4_+_69313145_69313167	1.24616	LHX2	ENST00000305363.4|TMPRSS11E|ENSG00000087128.5|transmembrane protease, serine 11E
hg19_v2_chr6_-_131291572_131291623	0.782211	LHX2	ENST00000529208.1|EPB41L2|ENSG00000079819.12|erythrocyte membrane protein band 4.1-like 2
hg19_v2_chr6_+_53883790_53883801	0.710288	LHX2	ENST00000509997.1|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein
hg19_v2_chr9_+_105757590_105757636	0.677265	LHX2	ENST00000374798.3|CYLC2|ENSG00000155833.10|cylicin, basic protein of sperm head cytoskeleton 2 	ENST00000487798.1|CYLC2|ENSG00000155833.10|cylicin, basic protein of sperm head cytoskeleton 2
hg19_v2_chr19_+_15838834_15838834	0.637694	LHX2	ENST00000305899.3|OR10H2|ENSG00000171942.3|olfactory receptor, family 10, subfamily H, member 2
hg19_v2_chr1_+_152975488_152975498	0.605902	LHX2	ENST00000542696.1|SPRR3|ENSG00000163209.10|small proline-rich protein 3
hg19_v2_chr3_+_57882024_57882045	0.586333	LHX2	ENST00000494088.1|SLMAP|ENSG00000163681.10|sarcolemma associated protein
hg19_v2_chr6_+_53883708_53883744	0.541291	LHX2	ENST00000514921.1|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein 	ENST00000274897.5|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein 	ENST00000370877.2|MLIP|ENSG00000146147.10|muscular LMNA-interacting protein
hg19_v2_chr19_+_42212501_42212521	0.492842	LHX2	ENST00000398599.4|CEACAM5|ENSG00000105388.10|carcinoembryonic antigen-related cell adhesion molecule 5
hg19_v2_chr11_-_62323702_62323738	0.459266	LHX2	ENST00000530285.1|AHNAK|ENSG00000124942.9|AHNAK nucleoprotein
hg19_v2_chr14_-_34420259_34420291	0.4468	LHX2	ENST00000250457.3|EGLN3|ENSG00000129521.9|egl-9 family hypoxia-inducible factor 3 	ENST00000547327.2|EGLN3|ENSG00000129521.9|egl-9 family hypoxia-inducible factor 3
hg19_v2_chr6_+_26199737_26199754	0.43563	LHX2	ENST00000359985.1|HIST1H2BF|ENSG00000197846.3|histone cluster 1, H2bf
hg19_v2_chr19_+_42212526_42212576	0.434031	LHX2	ENST00000598976.1|CEA|ENSG00000267881.1|Uncharacterized protein  	ENST00000221992.6|CEACAM5|ENSG00000105388.10|carcinoembryonic antigen-related cell adhesion molecule 5 	ENST00000405816.1|CEACAM5|ENSG00000105388.10|carcinoembryonic antigen-related cell adhesion molecule 5 	ENST00000435837.2|CEA|ENSG00000267881.1|Uncharacterized protein
hg19_v2_chr4_-_109541539_109541585	0.428084	LHX2	ENST00000509984.1|RPL34-AS1|ENSG00000234492.4|RPL34 antisense RNA 1 (head to head) 	ENST00000507248.1|RPL34-AS1|ENSG00000234492.4|RPL34 antisense RNA 1 (head to head) 	ENST00000506795.1|RPL34-AS1|ENSG00000234492.4|RPL34 antisense RNA 1 (head to head)
hg19_v2_chr18_+_34124507_34124520	0.428049	LHX2	ENST00000591635.1|FHOD3|ENSG00000134775.11|formin homology 2 domain containing 3
hg19_v2_chr1_+_62439037_62439047	0.414003	LHX2	ENST00000545929.1|INADL|ENSG00000132849.14|InaD-like (Drosophila)
hg19_v2_chr1_+_192127578_192127613	0.411652	LHX2	ENST00000367460.3|RGS18|ENSG00000150681.5|regulator of G-protein signaling 18
hg19_v2_chr14_+_56584414_56584532	0.407621	LHX2	ENST00000559044.1|PELI2|ENSG00000139946.5|pellino E3 ubiquitin protein ligase family member 2
hg19_v2_chr2_+_102953608_102953727	0.377263	LHX2	ENST00000311734.2|IL1RL1|ENSG00000115602.12|interleukin 1 receptor-like 1 	ENST00000409584.1|IL1RL1|ENSG00000115602.12|interleukin 1 receptor-like 1
hg19_v2_chr4_-_159956333_159956366	0.361343	LHX2	ENST00000434826.2|C4orf45|ENSG00000164123.6|chromosome 4 open reading frame 45
hg19_v2_chr12_+_122688090_122688284	0.35076	LHX2	ENST00000324189.4|B3GNT4|ENSG00000176383.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 	ENST00000546192.1|B3GNT4|ENSG00000176383.8|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
hg19_v2_chr4_+_88532028_88532028	0.348625	LHX2	ENST00000282478.7|DSPP|ENSG00000152591.8|dentin sialophosphoprotein
hg19_v2_chr10_+_95326416_95326454	0.333232	LHX2	ENST00000371481.4|FFAR4|ENSG00000186188.6|free fatty acid receptor 4 	ENST00000371483.4|FFAR4|ENSG00000186188.6|free fatty acid receptor 4 	ENST00000604414.1|FFAR4|ENSG00000186188.6|free fatty acid receptor 4
hg19_v2_chr10_-_24770632_24770632	0.308563	LHX2	ENST00000596413.1|AL353583.1|ENSG00000269879.1|AL353583.1
hg19_v2_chr8_+_22424551_22424585	0.306813	LHX2	ENST00000523348.1|SORBS3|ENSG00000120896.9|sorbin and SH3 domain containing 3
hg19_v2_chr3_+_62936098_62936146	0.301348	LHX2	ENST00000475886.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698 	ENST00000465684.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698 	ENST00000465262.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698 	ENST00000468072.1|LINC00698|ENSG00000244342.1|long intergenic non-protein coding RNA 698
hg19_v2_chr17_+_17082842_17082884	0.299528	LHX2	ENST00000579361.1|MPRIP|ENSG00000133030.15|myosin phosphatase Rho interacting protein
hg19_v2_chr10_-_90712520_90712536	0.299396	LHX2	ENST00000224784.6|ACTA2|ENSG00000107796.8|actin, alpha 2, smooth muscle, aorta
hg19_v2_chr1_-_198509804_198509865	0.292174	LHX2	ENST00000489986.1|ATP6V1G3|ENSG00000151418.7|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3 	ENST00000367382.1|ATP6V1G3|ENSG00000151418.7|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3
hg19_v2_chr17_-_57229155_57229198	0.281496	LHX2	ENST00000584089.1|SKA2|ENSG00000182628.8|spindle and kinetochore associated complex subunit 2
hg19_v2_chr6_+_123038689_123038707	0.27908	LHX2	ENST00000354275.2|PKIB|ENSG00000135549.10|protein kinase (cAMP-dependent, catalytic) inhibitor beta 	ENST00000368446.1|PKIB|ENSG00000135549.10|protein kinase (cAMP-dependent, catalytic) inhibitor beta
hg19_v2_chr12_-_118797475_118797527	0.278593	LHX2	ENST00000541786.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000419821.2|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000541878.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr11_+_31391381_31391426	0.278589	LHX2	ENST00000465995.1|DNAJC24|ENSG00000170946.10|DnaJ (Hsp40) homolog, subfamily C, member 24 	ENST00000536040.1|DNAJC24|ENSG00000170946.10|DnaJ (Hsp40) homolog, subfamily C, member 24
hg19_v2_chr12_+_128399965_128400017	0.276878	LHX2	ENST00000540882.1|LINC00507|ENSG00000256193.1|long intergenic non-protein coding RNA 507 	ENST00000542089.1|LINC00507|ENSG00000256193.1|long intergenic non-protein coding RNA 507
hg19_v2_chr21_-_31859755_31859755	0.274892	LHX2	ENST00000334055.3|KRTAP19-2|ENSG00000186965.3|keratin associated protein 19-2
hg19_v2_chr6_-_66417107_66417125	0.268302	LHX2	ENST00000370621.3|EYS|ENSG00000188107.9|eyes shut homolog (Drosophila) 	ENST00000370618.3|EYS|ENSG00000188107.9|eyes shut homolog (Drosophila) 	ENST00000503581.1|EYS|ENSG00000188107.9|eyes shut homolog (Drosophila) 	ENST00000393380.2|EYS|ENSG00000188107.9|eyes shut homolog (Drosophila)
hg19_v2_chr12_-_10978957_10978957	0.262053	LHX2	ENST00000240619.2|TAS2R10|ENSG00000121318.2|taste receptor, type 2, member 10
hg19_v2_chr4_-_89951028_89951062	0.259333	LHX2	ENST00000506913.1|FAM13A|ENSG00000138640.10|family with sequence similarity 13, member A
hg19_v2_chr17_+_61086917_61086921	0.256542	LHX2	ENST00000424789.2|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000389520.4|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chr2_+_210517895_210518021	0.25654	LHX2	ENST00000447185.1|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr9_+_116207007_116207012	0.25149	LHX2	ENST00000374140.2|RGS3|ENSG00000138835.18|regulator of G-protein signaling 3
hg19_v2_chr17_-_39222131_39222131	0.250479	LHX2	ENST00000394015.2|KRTAP2-4|ENSG00000213417.2|keratin associated protein 2-4
hg19_v2_chr3_-_149095652_149095652	0.249906	LHX2	ENST00000305366.3|TM4SF1|ENSG00000169908.6|transmembrane 4 L six family member 1
hg19_v2_chr4_-_90756769_90756846	0.246011	LHX2	ENST00000345009.4|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000505199.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000502987.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr14_-_51027838_51027851	0.242643	LHX2	ENST00000555216.1|MAP4K5|ENSG00000012983.7|mitogen-activated protein kinase kinase kinase kinase 5
hg19_v2_chr11_+_63606373_63606418	0.223525	LHX2	ENST00000402010.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000315032.8|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377809.4|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000413835.2|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2 	ENST00000377810.3|MARK2|ENSG00000072518.16|MAP/microtubule affinity-regulating kinase 2
hg19_v2_chr17_-_39140549_39140579	0.221561	LHX2	ENST00000377755.4|KRT40|ENSG00000204889.6|keratin 40
hg19_v2_chr9_-_21202204_21202204	0.213968	LHX2	ENST00000239347.3|IFNA7|ENSG00000214042.1|interferon, alpha 7
hg19_v2_chr8_-_93029865_93029904	0.21387	LHX2	ENST00000422361.2|RUNX1T1|ENSG00000079102.12|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
hg19_v2_chr10_+_4828815_4828822	0.213037	LHX2	ENST00000533295.1|AKR1E2|ENSG00000165568.13|aldo-keto reductase family 1, member E2
hg19_v2_chr2_-_112237835_112237844	0.212118	LHX2	ENST00000442293.1|MIR4435-1HG|ENSG00000172965.10|MIR4435-1 host gene (non-protein coding) 	ENST00000439494.1|MIR4435-1HG|ENSG00000172965.10|MIR4435-1 host gene (non-protein coding)
hg19_v2_chr10_-_29923893_29923907	0.206354	LHX2	ENST00000355867.4|SVIL|ENSG00000197321.10|supervillin
hg19_v2_chr10_-_14372870_14372944	0.206241	LHX2	ENST00000357447.2|FRMD4A|ENSG00000151474.15|FERM domain containing 4A
hg19_v2_chr9_-_77643307_77643366	0.199383	LHX2	ENST00000376834.3|C9orf41|ENSG00000156017.8|chromosome 9 open reading frame 41 	ENST00000376830.3|C9orf41|ENSG00000156017.8|chromosome 9 open reading frame 41
hg19_v2_chr11_-_55703876_55703876	0.198888	LHX2	ENST00000301532.3|OR5I1|ENSG00000167825.3|olfactory receptor, family 5, subfamily I, member 1
hg19_v2_chr11_+_64001962_64002033	0.192218	LHX2	ENST00000309422.2|VEGFB|ENSG00000173511.5|vascular endothelial growth factor B
hg19_v2_chr3_+_57881966_57881977	0.18457	LHX2	ENST00000495364.1|SLMAP|ENSG00000163681.10|sarcolemma associated protein
hg19_v2_chr14_+_22554680_22554691	0.182816	LHX2	ENST00000390451.2|TRAV23DV6|ENSG00000211803.2|T cell receptor alpha variable 23/delta variable 6
hg19_v2_chr2_+_68961934_68961975	0.1797	LHX2	ENST00000409202.3|ARHGAP25|ENSG00000163219.7|Rho GTPase activating protein 25
hg19_v2_chr6_+_126661253_126661356	0.177505	LHX2	ENST00000368326.1|CENPW|ENSG00000203760.4|centromere protein W 	ENST00000368325.1|CENPW|ENSG00000203760.4|centromere protein W 	ENST00000368328.4|CENPW|ENSG00000203760.4|centromere protein W
hg19_v2_chr16_+_23652773_23652850	0.173582	LHX2	ENST00000563998.1|DCTN5|ENSG00000166847.5|dynactin 5 (p25) 	ENST00000568589.1|DCTN5|ENSG00000166847.5|dynactin 5 (p25) 	ENST00000568272.1|DCTN5|ENSG00000166847.5|dynactin 5 (p25)
hg19_v2_chr2_+_68961905_68961932	0.172142	LHX2	ENST00000295381.3|ARHGAP25|ENSG00000163219.7|Rho GTPase activating protein 25
hg19_v2_chr2_-_55237484_55237585	0.169784	LHX2	ENST00000394609.2|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr7_-_54826869_54826880	0.164696	LHX2	ENST00000450622.1|SEC61G|ENSG00000132432.9|Sec61 gamma subunit
hg19_v2_chr6_-_26027480_26027522	0.160986	LHX2	ENST00000377364.3|HIST1H4B|ENSG00000124529.3|histone cluster 1, H4b
hg19_v2_chr5_-_175388327_175388416	0.157922	LHX2	ENST00000432305.2|THOC3|ENSG00000051596.5|THO complex 3 	ENST00000505969.1|THOC3|ENSG00000051596.5|THO complex 3
hg19_v2_chr2_+_87769459_87769476	0.155609	LHX2	ENST00000414030.1|LINC00152|ENSG00000222041.6|long intergenic non-protein coding RNA 152 	ENST00000437561.1|LINC00152|ENSG00000222041.6|long intergenic non-protein coding RNA 152
hg19_v2_chr12_+_12510352_12510360	0.150254	LHX2	ENST00000298571.6|LOH12CR1|ENSG00000165714.6|loss of heterozygosity, 12, chromosomal region 1
hg19_v2_chr6_+_125524785_125524861	0.147129	LHX2	ENST00000392482.2|TPD52L1|ENSG00000111907.16|tumor protein D52-like 1
hg19_v2_chr6_-_26043885_26043947	0.14312	LHX2	ENST00000357905.2|HIST1H2BB|ENSG00000196226.2|histone cluster 1, H2bb
hg19_v2_chr9_-_116061476_116061476	0.143078	LHX2	ENST00000441031.3|RNF183|ENSG00000165188.9|ring finger protein 183
hg19_v2_chr7_-_54826920_54826939	0.14262	LHX2	ENST00000395535.3|SEC61G|ENSG00000132432.9|Sec61 gamma subunit 	ENST00000352861.4|SEC61G|ENSG00000132432.9|Sec61 gamma subunit
hg19_v2_chr11_+_120973375_120973375	0.140774	LHX2	ENST00000264037.2|TECTA|ENSG00000109927.5|tectorin alpha
hg19_v2_chr17_-_39216344_39216368	0.140691	LHX2	ENST00000391418.2|KRTAP2-3|ENSG00000212724.2|keratin associated protein 2-3
hg19_v2_chrX_-_19988382_19988416	0.140398	LHX2	ENST00000356980.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379687.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379682.4|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23
hg19_v2_chr4_-_100575781_100575805	0.140091	LHX2	ENST00000511828.1|RP11-766F14.2|ENSG00000248713.1|Protein LOC285556
hg19_v2_chr6_+_105404899_105404931	0.1399	LHX2	ENST00000345080.4|LIN28B|ENSG00000187772.6|lin-28 homolog B (C. elegans)
hg19_v2_chr15_+_58430567_58430589	0.13694	LHX2	ENST00000536493.1|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr4_+_70796784_70796799	0.136242	LHX2	ENST00000246891.4|CSN1S1|ENSG00000126545.9|casein alpha s1 	ENST00000444405.3|CSN1S1|ENSG00000126545.9|casein alpha s1
hg19_v2_chr21_-_27423339_27423352	0.135623	LHX2	ENST00000415997.1|APP|ENSG00000142192.16|amyloid beta (A4) precursor protein
hg19_v2_chr7_+_37960163_37960291	0.135586	LHX2	ENST00000199448.4|EPDR1|ENSG00000086289.7|ependymin related 1 	ENST00000559325.1|EPDR1|ENSG00000086289.7|ependymin related 1 	ENST00000423717.1|EPDR1|ENSG00000086289.7|ependymin related 1
hg19_v2_chr13_-_45768841_45768855	0.135222	LHX2	ENST00000379108.1|KCTD4|ENSG00000180332.5|potassium channel tetramerization domain containing 4
hg19_v2_chr13_-_19755975_19755996	0.135091	LHX2	ENST00000400113.3|TUBA3C|ENSG00000198033.7|tubulin, alpha 3c
hg19_v2_chrX_+_18725758_18725784	0.13258	LHX2	ENST00000472826.1|PPEF1|ENSG00000086717.14|protein phosphatase, EF-hand calcium binding domain 1 	ENST00000544635.1|PPEF1|ENSG00000086717.14|protein phosphatase, EF-hand calcium binding domain 1 	ENST00000496075.2|PPEF1|ENSG00000086717.14|protein phosphatase, EF-hand calcium binding domain 1
hg19_v2_chr20_+_30697298_30697330	0.128695	LHX2	ENST00000398022.2|TM9SF4|ENSG00000101337.11|transmembrane 9 superfamily protein member 4
hg19_v2_chr14_+_22573582_22573620	0.125535	LHX2	ENST00000390453.1|TRAV24|ENSG00000211805.1|T cell receptor alpha variable 24
hg19_v2_chr15_+_58430368_58430401	0.125514	LHX2	ENST00000558772.1|AQP9|ENSG00000103569.5|aquaporin 9 	ENST00000219919.4|AQP9|ENSG00000103569.5|aquaporin 9
hg19_v2_chr4_+_128554081_128554121	0.125391	LHX2	ENST00000335251.6|INTU|ENSG00000164066.8|inturned planar cell polarity protein 	ENST00000296461.5|INTU|ENSG00000164066.8|inturned planar cell polarity protein
hg19_v2_chr5_+_180682720_180682720	0.122115	LHX2	ENST00000599439.1|AC008443.1|ENSG00000268397.1|CDNA: FLJ23158 fis, clone LNG09623; Uncharacterized protein
hg19_v2_chr16_+_24741013_24741058	0.117514	LHX2	ENST00000315183.7|TNRC6A|ENSG00000090905.13|trinucleotide repeat containing 6A 	ENST00000395799.3|TNRC6A|ENSG00000090905.13|trinucleotide repeat containing 6A
hg19_v2_chr16_-_18887627_18887627	0.116299	LHX2	ENST00000563235.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr10_-_4285923_4286104	0.113959	LHX2	ENST00000418372.1|LINC00702|ENSG00000233117.2|long intergenic non-protein coding RNA 702 	ENST00000608792.1|LINC00702|ENSG00000233117.2|long intergenic non-protein coding RNA 702
hg19_v2_chr2_-_55276320_55276334	0.113053	LHX2	ENST00000357376.3|RTN4|ENSG00000115310.13|reticulon 4
hg19_v2_chr12_-_113574028_113574051	0.109924	LHX2	ENST00000546530.1|RASAL1|ENSG00000111344.7|RAS protein activator like 1 (GAP1 like) 	ENST00000261729.5|RASAL1|ENSG00000111344.7|RAS protein activator like 1 (GAP1 like)
hg19_v2_chr18_+_3466248_3466312	0.1089	LHX2	ENST00000581029.1|RP11-838N2.4|ENSG00000266835.1|RP11-838N2.4	ENST00000581442.1|RP11-838N2.4|ENSG00000266835.1|RP11-838N2.4	ENST00000579007.1|RP11-838N2.4|ENSG00000266835.1|RP11-838N2.4
hg19_v2_chr2_+_173686303_173686325	0.106392	LHX2	ENST00000397087.3|RAPGEF4|ENSG00000091428.13|Rap guanine nucleotide exchange factor (GEF) 4
hg19_v2_chr18_-_19994830_19994830	0.105545	LHX2	ENST00000525417.1|CTAGE1|ENSG00000212710.3|cutaneous T-cell lymphoma-associated antigen 1
hg19_v2_chr11_-_2323089_2323154	0.105068	LHX2	ENST00000456145.2|C11orf21|ENSG00000110665.7|chromosome 11 open reading frame 21
hg19_v2_chr1_+_52682052_52682052	0.104302	LHX2	ENST00000371591.1|ZFYVE9|ENSG00000157077.10|zinc finger, FYVE domain containing 9
hg19_v2_chr2_-_55496174_55496334	0.101889	LHX2	ENST00000417363.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000412530.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000394600.3|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000366137.2|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2 	ENST00000420637.1|MTIF2|ENSG00000085760.10|mitochondrial translational initiation factor 2
hg19_v2_chr13_+_19756173_19756185	0.0973456	LHX2	ENST00000382988.2|RP11-408E5.4|ENSG00000121388.4|RP11-408E5.4
hg19_v2_chr12_+_128399917_128399958	0.0932793	LHX2	ENST00000544645.1|LINC00507|ENSG00000256193.1|long intergenic non-protein coding RNA 507
hg19_v2_chr16_+_23652700_23652713	0.0915379	LHX2	ENST00000300087.2|DCTN5|ENSG00000166847.5|dynactin 5 (p25)
hg19_v2_chr12_-_10955226_10955226	0.0914921	LHX2	ENST00000240687.2|TAS2R7|ENSG00000121377.2|taste receptor, type 2, member 7
hg19_v2_chr4_-_120243545_120243562	0.0898173	LHX2	ENST00000274024.3|FABP2|ENSG00000145384.3|fatty acid binding protein 2, intestinal
hg19_v2_chr2_+_234627424_234627444	0.0895953	LHX2	ENST00000373409.3|UGT1A4|ENSG00000244474.1|UDP glucuronosyltransferase 1 family, polypeptide A4
hg19_v2_chr8_+_52730143_52730143	0.0856451	LHX2	ENST00000415643.1|AC090186.1|ENSG00000232941.1|Uncharacterized protein
hg19_v2_chr7_-_122840015_122840040	0.0820817	LHX2	ENST00000194130.2|SLC13A1|ENSG00000081800.4|solute carrier family 13 (sodium/sulfate symporter), member 1
hg19_v2_chr4_+_71226468_71226484	0.0813975	LHX2	ENST00000226460.4|SMR3A|ENSG00000109208.4|submaxillary gland androgen regulated protein 3A
hg19_v2_chrX_-_11284095_11284131	0.0807418	LHX2	ENST00000303025.6|ARHGAP6|ENSG00000047648.17|Rho GTPase activating protein 6 	ENST00000534860.1|ARHGAP6|ENSG00000047648.17|Rho GTPase activating protein 6
hg19_v2_chr19_+_20188830_20188844	0.0799668	LHX2	ENST00000418063.2|ZNF90|ENSG00000213988.5|zinc finger protein 90
hg19_v2_chr4_+_147096837_147096912	0.0791121	LHX2	ENST00000296581.5|LSM6|ENSG00000164167.5|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae) 	ENST00000502781.1|LSM6|ENSG00000164167.5|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
hg19_v2_chr17_-_33864772_33864880	0.0790493	LHX2	ENST00000361112.4|SLFN12L|ENSG00000205045.4|schlafen family member 12-like
hg19_v2_chr14_+_101297740_101297818	0.078394	LHX2	ENST00000555928.1|MEG3|ENSG00000214548.10|maternally expressed 3 (non-protein coding)
hg19_v2_chr4_-_153332886_153333030	0.0759007	LHX2	ENST00000603841.1|FBXW7|ENSG00000109670.9|F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
hg19_v2_chr1_-_153518270_153518361	0.0752549	LHX2	ENST00000354332.4|S100A4|ENSG00000196154.7|S100 calcium binding protein A4 	ENST00000368716.4|S100A4|ENSG00000196154.7|S100 calcium binding protein A4
hg19_v2_chr15_+_69854027_69854062	0.0752505	LHX2	ENST00000498938.2|RP11-279F6.1|ENSG00000245750.3|RP11-279F6.1
hg19_v2_chr2_-_166930131_166930149	0.073642	LHX2	ENST00000303395.4|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000409050.1|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000423058.2|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000375405.3|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit
hg19_v2_chrX_+_105937068_105937091	0.0736358	LHX2	ENST00000324342.3|RNF128|ENSG00000133135.9|ring finger protein 128, E3 ubiquitin protein ligase
hg19_v2_chr1_+_95616933_95616933	0.0723689	LHX2	ENST00000604203.1|RP11-57H12.6|ENSG00000271092.1|TMEM56-RWDD3 readthrough
hg19_v2_chr2_+_87135076_87135076	0.0703734	LHX2	ENST00000409776.2|RGPD1|ENSG00000187627.10|RANBP2-like and GRIP domain containing 1
hg19_v2_chr3_-_160823040_160823151	0.0702566	LHX2	ENST00000484127.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000492353.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000473142.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000468268.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000460353.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000320474.4|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000392781.2|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
hg19_v2_chr3_+_35722844_35722999	0.0701735	LHX2	ENST00000436702.1|ARPP21|ENSG00000172995.12|cAMP-regulated phosphoprotein, 21kDa 	ENST00000438071.1|ARPP21|ENSG00000172995.12|cAMP-regulated phosphoprotein, 21kDa
hg19_v2_chr3_+_35722424_35722438	0.0693277	LHX2	ENST00000396481.2|ARPP21|ENSG00000172995.12|cAMP-regulated phosphoprotein, 21kDa
hg19_v2_chr12_+_9980069_9980087	0.0665597	LHX2	ENST00000354855.3|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1 	ENST00000324214.4|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1 	ENST00000279544.3|KLRF1|ENSG00000150045.7|killer cell lectin-like receptor subfamily F, member 1
hg19_v2_chr8_-_19459993_19460011	0.0645964	LHX2	ENST00000454498.2|CSGALNACT1|ENSG00000147408.10|chondroitin sulfate N-acetylgalactosaminyltransferase 1 	ENST00000520003.1|CSGALNACT1|ENSG00000147408.10|chondroitin sulfate N-acetylgalactosaminyltransferase 1
hg19_v2_chr8_-_109260897_109260994	0.0640799	LHX2	ENST00000521297.1|EIF3E|ENSG00000104408.5|eukaryotic translation initiation factor 3, subunit E 	ENST00000519030.1|EIF3E|ENSG00000104408.5|eukaryotic translation initiation factor 3, subunit E 	ENST00000521440.1|EIF3E|ENSG00000104408.5|eukaryotic translation initiation factor 3, subunit E 	ENST00000518345.1|EIF3E|ENSG00000104408.5|eukaryotic translation initiation factor 3, subunit E 	ENST00000519627.1|EIF3E|ENSG00000104408.5|eukaryotic translation initiation factor 3, subunit E 	ENST00000220849.5|EIF3E|ENSG00000104408.5|eukaryotic translation initiation factor 3, subunit E
hg19_v2_chr6_+_30848557_30848645	0.0636489	LHX2	ENST00000460944.2|DDR1|ENSG00000204580.7|discoidin domain receptor tyrosine kinase 1 	ENST00000324771.8|DDR1|ENSG00000204580.7|discoidin domain receptor tyrosine kinase 1
hg19_v2_chr2_+_90139056_90139085	0.0625336	LHX2	ENST00000492446.1|IGKV1D-16|ENSG00000241244.1|immunoglobulin kappa variable 1D-16
hg19_v2_chr7_-_103848405_103848495	0.0621281	LHX2	ENST00000447452.2|ORC5|ENSG00000164815.6|origin recognition complex, subunit 5 	ENST00000545943.1|ORC5|ENSG00000164815.6|origin recognition complex, subunit 5 	ENST00000297431.4|ORC5|ENSG00000164815.6|origin recognition complex, subunit 5
hg19_v2_chr3_-_160823158_160823177	0.0609495	LHX2	ENST00000392779.2|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000392780.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 	ENST00000494173.1|B3GALNT1|ENSG00000169255.9|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
hg19_v2_chr16_-_23652570_23652663	0.0595086	LHX2	ENST00000261584.4|PALB2|ENSG00000083093.5|partner and localizer of BRCA2
hg19_v2_chrX_-_20074895_20074954	0.0593566	LHX2	ENST00000543767.1|MAP7D2|ENSG00000184368.11|MAP7 domain containing 2
hg19_v2_chr7_-_112758589_112758619	0.0578278	LHX2	ENST00000413744.1|LINC00998|ENSG00000214194.4|long intergenic non-protein coding RNA 998 	ENST00000439551.1|LINC00998|ENSG00000214194.4|long intergenic non-protein coding RNA 998 	ENST00000441359.1|LINC00998|ENSG00000214194.4|long intergenic non-protein coding RNA 998
hg19_v2_chr14_+_69865401_69865426	0.0514494	LHX2	ENST00000556605.1|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9 	ENST00000336643.5|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9 	ENST00000031146.4|SLC39A9|ENSG00000029364.7|solute carrier family 39, member 9
hg19_v2_chr3_+_38017264_38017388	0.0510208	LHX2	ENST00000436654.1|CTDSPL|ENSG00000144677.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
hg19_v2_chr21_+_35014783_35014816	0.0503584	LHX2	ENST00000381291.4|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000381285.4|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399367.3|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399352.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399355.2|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399349.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein)
hg19_v2_chr11_-_104827425_104827425	0.0457923	LHX2	ENST00000393150.3|CASP4|ENSG00000196954.8|caspase 4, apoptosis-related cysteine peptidase
hg19_v2_chr2_+_45168875_45168916	0.0452891	LHX2	ENST00000260653.3|SIX3|ENSG00000138083.3|SIX homeobox 3
hg19_v2_chr14_-_107211459_107211478	0.0452705	LHX2	ENST00000390636.2|IGHV3-73|ENSG00000211976.2|immunoglobulin heavy variable 3-73
hg19_v2_chr6_+_130339710_130339745	0.044058	LHX2	ENST00000526087.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000533560.1|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila) 	ENST00000361794.2|L3MBTL3|ENSG00000198945.3|l(3)mbt-like 3 (Drosophila)
hg19_v2_chrX_+_30233668_30233698	0.0439084	LHX2	ENST00000378988.4|MAGEB2|ENSG00000099399.5|melanoma antigen family B, 2
hg19_v2_chr5_-_159546396_159546470	0.0438652	LHX2	ENST00000523662.1|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A 	ENST00000456329.3|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A 	ENST00000307063.7|PWWP2A|ENSG00000170234.8|PWWP domain containing 2A
hg19_v2_chr6_+_132873832_132873832	0.0438391	LHX2	ENST00000275200.1|TAAR8|ENSG00000146385.1|trace amine associated receptor 8
hg19_v2_chr12_+_6554021_6554040	0.043136	LHX2	ENST00000266557.3|CD27|ENSG00000139193.3|CD27 molecule
hg19_v2_chr5_-_78281603_78281617	0.0425227	LHX2	ENST00000264914.4|ARSB|ENSG00000113273.11|arylsulfatase B
hg19_v2_chr12_+_16064106_16064238	0.0423718	LHX2	ENST00000428559.2|DERA|ENSG00000023697.8|deoxyribose-phosphate aldolase (putative)
hg19_v2_chr1_+_182419261_182419285	0.0350783	LHX2	ENST00000294854.8|RGSL1|ENSG00000121446.13|regulator of G-protein signaling like 1 	ENST00000542961.1|RGSL1|ENSG00000121446.13|regulator of G-protein signaling like 1
hg19_v2_chr12_-_74686314_74686425	0.0327864	LHX2	ENST00000551210.1|RP11-81H3.2|ENSG00000251138.2|RP11-81H3.2	ENST00000515416.2|RP11-81H3.2|ENSG00000251138.2|RP11-81H3.2	ENST00000549905.1|RP11-81H3.2|ENSG00000251138.2|RP11-81H3.2
hg19_v2_chr17_+_45000483_45000563	0.0326869	LHX2	ENST00000576910.2|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000439730.2|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000393456.2|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000415811.2|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000575949.1|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000225567.4|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000572403.1|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2 	ENST00000570879.1|GOSR2|ENSG00000108433.11|golgi SNAP receptor complex member 2
hg19_v2_chr18_+_3247779_3247871	0.0321394	LHX2	ENST00000578611.1|MYL12A|ENSG00000101608.8|myosin, light chain 12A, regulatory, non-sarcomeric 	ENST00000583449.1|MYL12A|ENSG00000101608.8|myosin, light chain 12A, regulatory, non-sarcomeric
hg19_v2_chr10_+_69865866_69865912	0.0311517	LHX2	ENST00000354393.2|MYPN|ENSG00000138347.11|myopalladin
hg19_v2_chr8_-_82395461_82395498	0.0309491	LHX2	ENST00000256104.4|FABP4|ENSG00000170323.4|fatty acid binding protein 4, adipocyte
hg19_v2_chr19_-_44384291_44384291	0.0286075	LHX2	ENST00000324394.6|ZNF404|ENSG00000176222.7|zinc finger protein 404
hg19_v2_chr6_+_3259148_3259294	0.0263512	LHX2	ENST00000419065.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4 	ENST00000473000.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4 	ENST00000451246.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4 	ENST00000454610.2|PSMG4|ENSG00000180822.7|proteasome (prosome, macropain) assembly chaperone 4
hg19_v2_chr4_+_70916119_70916167	0.0240089	LHX2	ENST00000246896.3|HTN1|ENSG00000126550.4|histatin 1 	ENST00000511674.1|HTN1|ENSG00000126550.4|histatin 1
hg19_v2_chr17_-_39324424_39324474	0.0190435	LHX2	ENST00000391356.2|KRTAP4-3|ENSG00000196156.3|keratin associated protein 4-3
hg19_v2_chrX_+_19373700_19373845	0.0163852	LHX2	ENST00000379804.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1
hg19_v2_chr7_-_151217166_151217206	0.0155646	LHX2	ENST00000496004.1|RHEB|ENSG00000106615.5|Ras homolog enriched in brain
hg19_v2_chr2_+_74648848_74648894	0.0138931	LHX2	ENST00000409791.1|WDR54|ENSG00000005448.12|WD repeat domain 54 	ENST00000426787.1|WDR54|ENSG00000005448.12|WD repeat domain 54 	ENST00000348227.4|WDR54|ENSG00000005448.12|WD repeat domain 54
hg19_v2_chr5_+_179921344_179921423	0.0134386	LHX2	ENST00000261951.4|CNOT6|ENSG00000113300.7|CCR4-NOT transcription complex, subunit 6
hg19_v2_chr21_-_35014027_35014066	0.0122349	LHX2	ENST00000399442.1|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000413017.2|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000445393.1|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000417979.1|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000426935.1|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000381540.3|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000361534.2|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000381554.3|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1
hg19_v2_chr9_-_28670283_28670283	0.0115651	LHX2	ENST00000379992.2|LINGO2|ENSG00000174482.6|leucine rich repeat and Ig domain containing 2
hg19_v2_chr1_-_147142557_147142620	0.00968519	LHX2	ENST00000369238.6|ACP6|ENSG00000162836.7|acid phosphatase 6, lysophosphatidic
hg19_v2_chrX_+_52513455_52513455	0.00707351	LHX2	ENST00000446098.1|XAGE1C|ENSG00000183461.12|X antigen family, member 1C
hg19_v2_chr2_-_231084659_231084721	0.00672677	LHX2	ENST00000258381.6|SP110|ENSG00000135899.12|SP110 nuclear body protein 	ENST00000358662.4|SP110|ENSG00000135899.12|SP110 nuclear body protein 	ENST00000455674.1|SP110|ENSG00000135899.12|SP110 nuclear body protein 	ENST00000392048.3|SP110|ENSG00000135899.12|SP110 nuclear body protein
hg19_v2_chr14_+_27342334_27342369	0.00621506	LHX2	ENST00000548170.1|RP11-384J4.1|ENSG00000257612.1|RP11-384J4.1	ENST00000552926.1|RP11-384J4.1|ENSG00000257612.1|RP11-384J4.1
hg19_v2_chr3_+_33155444_33155492	0.0052914	LHX2	ENST00000320954.6|CRTAP|ENSG00000170275.10|cartilage associated protein
hg19_v2_chr13_+_24844819_24844836	0.00500624	LHX2	ENST00000399949.2|SPATA13|ENSG00000182957.11|spermatogenesis associated 13
hg19_v2_chr6_-_27841289_27841318	0.0028153	LHX2	ENST00000355981.2|HIST1H4L|ENSG00000198558.2|histone cluster 1, H4l
hg19_v2_chr12_+_48722763_48722763	0.00197781	LHX2	ENST00000335017.1|H1FNT|ENSG00000187166.1|H1 histone family, member N, testis-specific
hg19_v2_chr1_+_145883868_145883868	0.00196695	LHX2	ENST00000447947.2|GPR89C|ENSG00000196644.8|G protein-coupled receptor 89C
hg19_v2_chr12_-_118796910_118796943	0.00169223	LHX2	ENST00000541186.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000539872.1|TAOK3|ENSG00000135090.9|TAO kinase 3
