hg19_v2_chr1_-_197036364_197036401	1.20265	HOXD9	ENST00000367412.1|F13B|ENSG00000143278.3|coagulation factor XIII, B polypeptide
hg19_v2_chr17_+_68071389_68071426	1.15988	HOXD9	ENST00000283936.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000392671.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr17_+_68071458_68071481	1.13469	HOXD9	ENST00000589377.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr7_-_16921601_16921614	1.07062	HOXD9	ENST00000402239.3|AGR3|ENSG00000173467.4|anterior gradient 3 	ENST00000310398.2|AGR3|ENSG00000173467.4|anterior gradient 3 	ENST00000414935.1|AGR3|ENSG00000173467.4|anterior gradient 3
hg19_v2_chr3_-_112564797_112564797	1.02237	HOXD9	ENST00000398214.1|CD200R1L|ENSG00000206531.6|CD200 receptor 1-like 	ENST00000448932.1|CD200R1L|ENSG00000206531.6|CD200 receptor 1-like
hg19_v2_chr6_-_52774464_52774499	0.992761	HOXD9	ENST00000370968.1|GSTA3|ENSG00000174156.9|glutathione S-transferase alpha 3 	ENST00000211122.3|GSTA3|ENSG00000174156.9|glutathione S-transferase alpha 3
hg19_v2_chr5_+_68860949_68860949	0.96824	HOXD9	ENST00000507595.1|GTF2H2C|ENSG00000183474.11|general transcription factor IIH, polypeptide 2C
hg19_v2_chr5_+_94727048_94727074	0.809801	HOXD9	ENST00000283357.5|FAM81B|ENSG00000153347.5|family with sequence similarity 81, member B
hg19_v2_chr4_+_71108300_71108323	0.80788	HOXD9	ENST00000304954.3|CSN3|ENSG00000171209.3|casein kappa
hg19_v2_chr22_+_23487513_23487707	0.765722	HOXD9	ENST00000263116.2|RAB36|ENSG00000100228.8|RAB36, member RAS oncogene family 	ENST00000341989.4|RAB36|ENSG00000100228.8|RAB36, member RAS oncogene family
hg19_v2_chr2_-_158345462_158345480	0.760709	HOXD9	ENST00000439355.1|CYTIP|ENSG00000115165.5|cytohesin 1 interacting protein 	ENST00000540637.1|CYTIP|ENSG00000115165.5|cytohesin 1 interacting protein
hg19_v2_chr1_+_38022513_38022571	0.749803	HOXD9	ENST00000296218.7|DNALI1|ENSG00000163879.9|dynein, axonemal, light intermediate chain 1
hg19_v2_chr10_-_71169031_71169044	0.715603	HOXD9	ENST00000373307.1|TACR2|ENSG00000075073.10|tachykinin receptor 2
hg19_v2_chr4_-_110723194_110723207	0.713504	HOXD9	ENST00000394635.3|CFI|ENSG00000205403.8|complement factor I
hg19_v2_chr2_-_231989808_231989832	0.690061	HOXD9	ENST00000258400.3|HTR2B|ENSG00000135914.5|5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled
hg19_v2_chr5_-_41261540_41261575	0.671732	HOXD9	ENST00000263413.3|C6|ENSG00000039537.9|complement component 6
hg19_v2_chr9_-_39239171_39239171	0.661647	HOXD9	ENST00000358144.2|CNTNAP3|ENSG00000106714.13|contactin associated protein-like 3
hg19_v2_chr9_-_138391692_138391741	0.64971	HOXD9	ENST00000429260.2|C9orf116|ENSG00000160345.8|chromosome 9 open reading frame 116
hg19_v2_chr17_+_9479944_9479965	0.647727	HOXD9	ENST00000396219.3|WDR16|ENSG00000166596.10|WD repeat domain 16 	ENST00000352665.5|WDR16|ENSG00000166596.10|WD repeat domain 16
hg19_v2_chr2_+_143886877_143886888	0.646591	HOXD9	ENST00000295095.6|ARHGAP15|ENSG00000075884.8|Rho GTPase activating protein 15
hg19_v2_chr6_+_32812568_32812631	0.638768	HOXD9	ENST00000414474.1|PSMB9|ENSG00000240065.3|proteasome (prosome, macropain) subunit, beta type, 9
hg19_v2_chr17_-_29641084_29641103	0.617912	HOXD9	ENST00000544462.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr6_-_32634425_32634479	0.599381	HOXD9	ENST00000399082.3|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1 	ENST00000399079.3|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1 	ENST00000374943.4|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1 	ENST00000434651.2|HLA-DQB1|ENSG00000179344.12|major histocompatibility complex, class II, DQ beta 1
hg19_v2_chr1_+_240177627_240177649	0.588294	HOXD9	ENST00000447095.1|FMN2|ENSG00000155816.15|formin 2
hg19_v2_chr12_+_15125954_15125982	0.584986	HOXD9	ENST00000266395.2|PDE6H|ENSG00000139053.2|phosphodiesterase 6H, cGMP-specific, cone, gamma
hg19_v2_chr6_+_29274403_29274403	0.574959	HOXD9	ENST00000377160.2|OR14J1|ENSG00000204695.2|olfactory receptor, family 14, subfamily J, member 1
hg19_v2_chr9_+_12693336_12693460	0.566624	HOXD9	ENST00000381137.2|TYRP1|ENSG00000107165.8|tyrosinase-related protein 1 	ENST00000388918.5|TYRP1|ENSG00000107165.8|tyrosinase-related protein 1
hg19_v2_chr3_+_94657118_94657130	0.54134	HOXD9	ENST00000466089.1|LINC00879|ENSG00000239589.1|long intergenic non-protein coding RNA 879 	ENST00000470465.1|LINC00879|ENSG00000239589.1|long intergenic non-protein coding RNA 879
hg19_v2_chr7_-_122339162_122339210	0.528428	HOXD9	ENST00000340112.2|RNF133|ENSG00000188050.2|ring finger protein 133
hg19_v2_chr11_-_5255861_5255888	0.526804	HOXD9	ENST00000380299.3|HBD|ENSG00000223609.3|hemoglobin, delta
hg19_v2_chr3_+_94657086_94657107	0.524103	HOXD9	ENST00000463200.1|LINC00879|ENSG00000239589.1|long intergenic non-protein coding RNA 879
hg19_v2_chr8_-_10512569_10512612	0.50368	HOXD9	ENST00000382483.3|RP1L1|ENSG00000183638.5|retinitis pigmentosa 1-like 1
hg19_v2_chr19_-_56826157_56826294	0.501376	HOXD9	ENST00000592509.1|ZSCAN5A|ENSG00000131848.5|zinc finger and SCAN domain containing 5A 	ENST00000592679.1|ZSCAN5A|ENSG00000131848.5|zinc finger and SCAN domain containing 5A 	ENST00000588442.1|ZSCAN5A|ENSG00000131848.5|zinc finger and SCAN domain containing 5A 	ENST00000593106.1|ZSCAN5A|ENSG00000131848.5|zinc finger and SCAN domain containing 5A 	ENST00000587492.1|ZSCAN5A|ENSG00000131848.5|zinc finger and SCAN domain containing 5A 	ENST00000254165.3|ZSCAN5A|ENSG00000131848.5|zinc finger and SCAN domain containing 5A
hg19_v2_chr16_-_20556492_20556492	0.493276	HOXD9	ENST00000568098.1|ACSM2B|ENSG00000066813.10|acyl-CoA synthetase medium-chain family member 2B
hg19_v2_chr2_+_133874577_133874577	0.468423	HOXD9	ENST00000596384.1|AC011755.1|ENSG00000269686.1|HCG2006742; Protein LOC100996685
hg19_v2_chr12_-_90049828_90049847	0.467924	HOXD9	ENST00000261173.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1 	ENST00000348959.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr12_+_119772502_119772522	0.446555	HOXD9	ENST00000536742.1|CCDC60|ENSG00000183273.2|coiled-coil domain containing 60 	ENST00000327554.2|CCDC60|ENSG00000183273.2|coiled-coil domain containing 60
hg19_v2_chr12_-_90049878_90049890	0.443457	HOXD9	ENST00000359142.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr17_-_54893250_54893278	0.424268	HOXD9	ENST00000397862.2|C17orf67|ENSG00000214226.4|chromosome 17 open reading frame 67
hg19_v2_chr2_-_118943930_118943963	0.416824	HOXD9	ENST00000449075.1|AC093901.1|ENSG00000226856.1|AC093901.1	ENST00000414886.1|AC093901.1|ENSG00000226856.1|AC093901.1	ENST00000449819.1|AC093901.1|ENSG00000226856.1|AC093901.1
hg19_v2_chr10_+_115511213_115511272	0.407587	HOXD9	ENST00000361048.1|PLEKHS1|ENSG00000148735.10|pleckstrin homology domain containing, family S member 1
hg19_v2_chr3_+_2933893_2933921	0.393891	HOXD9	ENST00000397459.2|CNTN4|ENSG00000144619.10|contactin 4
hg19_v2_chr11_-_102401469_102401488	0.392162	HOXD9	ENST00000260227.4|MMP7|ENSG00000137673.4|matrix metallopeptidase 7 (matrilysin, uterine)
hg19_v2_chr12_-_9268707_9268758	0.375417	HOXD9	ENST00000318602.7|A2M|ENSG00000175899.10|alpha-2-macroglobulin
hg19_v2_chr1_-_48937838_48937905	0.340547	HOXD9	ENST00000371847.3|SPATA6|ENSG00000132122.7|spermatogenesis associated 6
hg19_v2_chr19_+_55014085_55014123	0.333961	HOXD9	ENST00000351841.2|LAIR2|ENSG00000167618.5|leukocyte-associated immunoglobulin-like receptor 2
hg19_v2_chr19_+_55014013_55014052	0.331907	HOXD9	ENST00000301202.2|LAIR2|ENSG00000167618.5|leukocyte-associated immunoglobulin-like receptor 2
hg19_v2_chr3_+_195413160_195413288	0.330977	HOXD9	ENST00000599448.1|LINC00969|ENSG00000242086.4|long intergenic non-protein coding RNA 969
hg19_v2_chr1_+_104615595_104615645	0.330048	HOXD9	ENST00000418362.1|RP11-364B6.1|ENSG00000215869.3|RP11-364B6.1
hg19_v2_chr6_+_131958436_131958525	0.327875	HOXD9	ENST00000357639.3|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3 	ENST00000543135.1|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3 	ENST00000427148.2|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3 	ENST00000358229.5|ENPP3|ENSG00000154269.10|ectonucleotide pyrophosphatase/phosphodiesterase 3
hg19_v2_chr4_+_175839551_175839567	0.324566	HOXD9	ENST00000404450.4|ADAM29|ENSG00000168594.11|ADAM metallopeptidase domain 29 	ENST00000514159.1|ADAM29|ENSG00000168594.11|ADAM metallopeptidase domain 29
hg19_v2_chrX_-_130423200_130423228	0.323739	HOXD9	ENST00000361420.3|IGSF1|ENSG00000147255.13|immunoglobulin superfamily, member 1
hg19_v2_chr14_+_62462541_62462541	0.315898	HOXD9	ENST00000430451.2|SYT16|ENSG00000139973.11|synaptotagmin XVI
hg19_v2_chr12_-_11463353_11463372	0.308939	HOXD9	ENST00000279575.1|PRB4|ENSG00000230657.2|proline-rich protein BstNI subfamily 4 	ENST00000535904.1|PRB4|ENSG00000230657.2|proline-rich protein BstNI subfamily 4 	ENST00000445719.2|PRB4|ENSG00000230657.2|proline-rich protein BstNI subfamily 4
hg19_v2_chr17_+_7155819_7155942	0.295813	HOXD9	ENST00000570322.1|ELP5|ENSG00000170291.10|elongator acetyltransferase complex subunit 5 	ENST00000576496.1|ELP5|ENSG00000170291.10|elongator acetyltransferase complex subunit 5 	ENST00000574841.2|ELP5|ENSG00000170291.10|elongator acetyltransferase complex subunit 5
hg19_v2_chr17_+_60447579_60447579	0.293012	HOXD9	ENST00000450662.2|EFCAB3|ENSG00000172421.3|EF-hand calcium binding domain 3
hg19_v2_chr5_+_61874562_61874685	0.292925	HOXD9	ENST00000334994.5|LRRC70|ENSG00000186105.7|leucine rich repeat containing 70 	ENST00000409534.1|IPO11|ENSG00000086200.12|importin 11
hg19_v2_chr10_-_13523073_13523073	0.288541	HOXD9	ENST00000440282.1|BEND7|ENSG00000165626.12|BEN domain containing 7
hg19_v2_chr16_+_21689835_21689835	0.285147	HOXD9	ENST00000286149.4|OTOA|ENSG00000155719.12|otoancorin 	ENST00000388958.3|OTOA|ENSG00000155719.12|otoancorin
hg19_v2_chr8_-_26724784_26724800	0.28216	HOXD9	ENST00000380573.3|ADRA1A|ENSG00000120907.13|adrenoceptor alpha 1A
hg19_v2_chr18_-_74728998_74729051	0.281452	HOXD9	ENST00000359645.3|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397875.3|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397869.3|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000578193.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000578873.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397866.4|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000528160.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000527041.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000526111.1|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000397865.5|MBP|ENSG00000197971.10|myelin basic protein 	ENST00000382582.3|MBP|ENSG00000197971.10|myelin basic protein
hg19_v2_chr15_+_66797627_66797684	0.279484	HOXD9	ENST00000565627.1|ZWILCH|ENSG00000174442.7|zwilch kinetochore protein 	ENST00000564179.1|ZWILCH|ENSG00000174442.7|zwilch kinetochore protein
hg19_v2_chr15_+_76352178_76352306	0.278908	HOXD9	ENST00000388942.3|C15orf27|ENSG00000169758.8|chromosome 15 open reading frame 27
hg19_v2_chr1_+_109255279_109255279	0.275911	HOXD9	ENST00000370017.3|FNDC7|ENSG00000143107.4|fibronectin type III domain containing 7
hg19_v2_chrX_+_36246735_36246735	0.273177	HOXD9	ENST00000378653.3|CXorf30|ENSG00000205081.4|chromosome X open reading frame 30
hg19_v2_chr14_+_57671888_57671888	0.272823	HOXD9	ENST00000391612.1|AL391152.1|ENSG00000212928.1|AL391152.1
hg19_v2_chr2_-_188312971_188312987	0.270682	HOXD9	ENST00000410068.1|CALCRL|ENSG00000064989.8|calcitonin receptor-like 	ENST00000447403.1|CALCRL|ENSG00000064989.8|calcitonin receptor-like 	ENST00000410102.1|CALCRL|ENSG00000064989.8|calcitonin receptor-like
hg19_v2_chr7_-_80141328_80141339	0.267873	HOXD9	ENST00000398291.3|GNAT3|ENSG00000214415.3|guanine nucleotide binding protein, alpha transducing 3
hg19_v2_chr11_+_112047087_112047123	0.267385	HOXD9	ENST00000526088.1|BCO2|ENSG00000197580.7|beta-carotene oxygenase 2 	ENST00000532593.1|BCO2|ENSG00000197580.7|beta-carotene oxygenase 2 	ENST00000531169.1|BCO2|ENSG00000197580.7|beta-carotene oxygenase 2
hg19_v2_chr7_-_50633078_50633154	0.263738	HOXD9	ENST00000444124.2|DDC|ENSG00000132437.13|dopa decarboxylase (aromatic L-amino acid decarboxylase)
hg19_v2_chr1_+_196857144_196857233	0.259455	HOXD9	ENST00000367416.2|CFHR4|ENSG00000134365.8|complement factor H-related 4 	ENST00000251424.4|CFHR4|ENSG00000134365.8|complement factor H-related 4 	ENST00000367418.2|CFHR4|ENSG00000134365.8|complement factor H-related 4
hg19_v2_chr6_-_132967142_132967142	0.256635	HOXD9	ENST00000275216.1|TAAR1|ENSG00000146399.1|trace amine associated receptor 1
hg19_v2_chr15_+_66797455_66797483	0.255534	HOXD9	ENST00000446801.2|ZWILCH|ENSG00000174442.7|zwilch kinetochore protein
hg19_v2_chr6_-_49681235_49681274	0.254376	HOXD9	ENST00000339139.4|CRISP2|ENSG00000124490.9|cysteine-rich secretory protein 2
hg19_v2_chr3_+_111393501_111393538	0.245859	HOXD9	ENST00000393934.3|PLCXD2|ENSG00000240891.2|phosphatidylinositol-specific phospholipase C, X domain containing 2
hg19_v2_chr6_+_6588316_6588341	0.245341	HOXD9	ENST00000379953.2|LY86|ENSG00000112799.4|lymphocyte antigen 86
hg19_v2_chr22_+_30477000_30477000	0.237212	HOXD9	ENST00000403975.1|HORMAD2|ENSG00000176635.13|HORMA domain containing 2
hg19_v2_chrX_+_36254051_36254051	0.237164	HOXD9	ENST00000378657.4|CXorf30|ENSG00000205081.4|chromosome X open reading frame 30
hg19_v2_chr3_+_63428752_63428777	0.232741	HOXD9	ENST00000295894.5|SYNPR|ENSG00000163630.6|synaptoporin
hg19_v2_chr4_-_150736962_150736980	0.231464	HOXD9	ENST00000502345.1|RP11-526A4.1|ENSG00000234828.3|RP11-526A4.1	ENST00000510975.1|RP11-526A4.1|ENSG00000234828.3|RP11-526A4.1	ENST00000511993.1|RP11-526A4.1|ENSG00000234828.3|RP11-526A4.1
hg19_v2_chr9_-_215744_215893	0.231038	HOXD9	ENST00000382387.2|C9orf66|ENSG00000183784.5|chromosome 9 open reading frame 66
hg19_v2_chr3_+_63428982_63429027	0.230721	HOXD9	ENST00000479198.1|SYNPR|ENSG00000163630.6|synaptoporin 	ENST00000460711.1|SYNPR|ENSG00000163630.6|synaptoporin 	ENST00000465156.1|SYNPR|ENSG00000163630.6|synaptoporin
hg19_v2_chr3_-_38835501_38835501	0.22913	HOXD9	ENST00000449082.2|SCN10A|ENSG00000185313.6|sodium channel, voltage-gated, type X, alpha subunit
hg19_v2_chr4_-_168155730_168155740	0.216831	HOXD9	ENST00000502330.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000357154.3|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chrX_-_15332665_15332693	0.208135	HOXD9	ENST00000537676.1|ASB11|ENSG00000165192.9|ankyrin repeat and SOCS box containing 11 	ENST00000344384.4|ASB11|ENSG00000165192.9|ankyrin repeat and SOCS box containing 11
hg19_v2_chr7_+_117864708_117864798	0.196567	HOXD9	ENST00000357099.4|ANKRD7|ENSG00000106013.8|ankyrin repeat domain 7 	ENST00000265224.4|ANKRD7|ENSG00000106013.8|ankyrin repeat domain 7 	ENST00000486422.1|ANKRD7|ENSG00000106013.8|ankyrin repeat domain 7 	ENST00000417525.1|ANKRD7|ENSG00000106013.8|ankyrin repeat domain 7
hg19_v2_chr14_+_65878565_65878632	0.19479	HOXD9	ENST00000556518.1|FUT8|ENSG00000033170.12|fucosyltransferase 8 (alpha (1,6) fucosyltransferase) 	ENST00000557164.1|FUT8|ENSG00000033170.12|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)
hg19_v2_chrX_-_130423240_130423288	0.190253	HOXD9	ENST00000370910.1|IGSF1|ENSG00000147255.13|immunoglobulin superfamily, member 1 	ENST00000370901.4|IGSF1|ENSG00000147255.13|immunoglobulin superfamily, member 1
hg19_v2_chr12_+_75728419_75728476	0.187132	HOXD9	ENST00000378695.4|GLIPR1L1|ENSG00000173401.5|GLI pathogenesis-related 1 like 1 	ENST00000312442.2|GLIPR1L1|ENSG00000173401.5|GLI pathogenesis-related 1 like 1
hg19_v2_chr1_-_100643765_100643829	0.183071	HOXD9	ENST00000370137.1|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39 	ENST00000370138.1|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39 	ENST00000342895.3|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39
hg19_v2_chr16_-_18887627_18887627	0.177869	HOXD9	ENST00000563235.1|SMG1|ENSG00000157106.12|SMG1 phosphatidylinositol 3-kinase-related kinase
hg19_v2_chr10_+_104613980_104613989	0.176861	HOXD9	ENST00000339834.5|C10orf32|ENSG00000166275.11|chromosome 10 open reading frame 32
hg19_v2_chr1_-_39339777_39339777	0.173369	HOXD9	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chrX_-_130423386_130423403	0.172957	HOXD9	ENST00000370903.3|IGSF1|ENSG00000147255.13|immunoglobulin superfamily, member 1
hg19_v2_chr14_+_23654525_23654545	0.168424	HOXD9	ENST00000399910.1|C14orf164|ENSG00000215277.4|chromosome 14 open reading frame 164 	ENST00000492621.1|C14orf164|ENSG00000215277.4|chromosome 14 open reading frame 164
hg19_v2_chr1_-_48937821_48937832	0.168311	HOXD9	ENST00000396199.3|SPATA6|ENSG00000132122.7|spermatogenesis associated 6
hg19_v2_chr1_-_165414414_165414433	0.165861	HOXD9	ENST00000359842.5|RXRG|ENSG00000143171.8|retinoid X receptor, gamma
hg19_v2_chr10_-_115614127_115614176	0.163331	HOXD9	ENST00000369305.1|DCLRE1A|ENSG00000198924.3|DNA cross-link repair 1A
hg19_v2_chr10_+_104614008_104614042	0.161296	HOXD9	ENST00000369883.3|C10orf32|ENSG00000166275.11|chromosome 10 open reading frame 32
hg19_v2_chr2_-_179567206_179567260	0.16116	HOXD9	ENST00000414766.1|TTN|ENSG00000155657.19|titin
hg19_v2_chr6_+_46761118_46761132	0.16056	HOXD9	ENST00000230588.4|MEP1A|ENSG00000112818.5|meprin A, alpha (PABA peptide hydrolase)
hg19_v2_chr11_+_49050504_49050504	0.159039	HOXD9	ENST00000332682.7|TRIM49B|ENSG00000182053.8|tripartite motif containing 49B
hg19_v2_chr2_+_109237717_109237729	0.156375	HOXD9	ENST00000409441.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr22_+_22749343_22749360	0.155735	HOXD9	ENST00000390298.2|IGLV7-43|ENSG00000211652.2|immunoglobulin lambda variable 7-43
hg19_v2_chr11_-_104972158_104972190	0.155002	HOXD9	ENST00000598974.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000593315.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000594519.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000415981.2|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000525374.1|CARD16|ENSG00000204397.3|caspase recruitment domain family, member 16 	ENST00000375707.1|CARD17|ENSG00000255221.2|caspase recruitment domain family, member 17
hg19_v2_chr4_-_168155577_168155661	0.154989	HOXD9	ENST00000541354.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000509854.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000512681.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000421836.2|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000510741.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000510403.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr10_+_115614370_115614436	0.152337	HOXD9	ENST00000369301.3|NHLRC2|ENSG00000196865.4|NHL repeat containing 2
hg19_v2_chr6_-_39399087_39399150	0.148605	HOXD9	ENST00000229913.5|KIF6|ENSG00000164627.13|kinesin family member 6 	ENST00000541946.1|KIF6|ENSG00000164627.13|kinesin family member 6 	ENST00000394362.1|KIF6|ENSG00000164627.13|kinesin family member 6
hg19_v2_chrX_-_110513703_110513751	0.148137	HOXD9	ENST00000324068.1|CAPN6|ENSG00000077274.7|calpain 6
hg19_v2_chr1_-_236046872_236046882	0.143001	HOXD9	ENST00000536965.1|LYST|ENSG00000143669.9|lysosomal trafficking regulator
hg19_v2_chr5_+_140248518_140248689	0.135859	HOXD9	ENST00000398640.2|PCDHA11|ENSG00000249158.2|protocadherin alpha 11
hg19_v2_chr12_+_58176525_58176601	0.135537	HOXD9	ENST00000543727.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000540550.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000323833.8|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000350762.5|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000550559.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000548851.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000434359.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial 	ENST00000457189.1|TSFM|ENSG00000123297.12|Ts translation elongation factor, mitochondrial
hg19_v2_chr8_+_86089619_86089653	0.134904	HOXD9	ENST00000256117.5|E2F5|ENSG00000133740.6|E2F transcription factor 5, p130-binding 	ENST00000416274.2|E2F5|ENSG00000133740.6|E2F transcription factor 5, p130-binding
hg19_v2_chr6_+_13272904_13272989	0.133737	HOXD9	ENST00000379335.3|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1 	ENST00000379329.1|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chr2_+_25015968_25016029	0.132111	HOXD9	ENST00000380834.2|CENPO|ENSG00000138092.6|centromere protein O 	ENST00000473706.1|CENPO|ENSG00000138092.6|centromere protein O
hg19_v2_chr4_+_71263599_71263668	0.129511	HOXD9	ENST00000399575.2|PROL1|ENSG00000171199.5|proline rich, lacrimal 1
hg19_v2_chr8_+_86089460_86089483	0.125794	HOXD9	ENST00000418930.2|E2F5|ENSG00000133740.6|E2F transcription factor 5, p130-binding
hg19_v2_chr20_-_29978383_29978406	0.123891	HOXD9	ENST00000339144.3|DEFB119|ENSG00000180483.6|defensin, beta 119 	ENST00000376321.3|DEFB119|ENSG00000180483.6|defensin, beta 119
hg19_v2_chr4_-_84035868_84035897	0.123478	HOXD9	ENST00000426923.2|PLAC8|ENSG00000145287.6|placenta-specific 8 	ENST00000509973.1|PLAC8|ENSG00000145287.6|placenta-specific 8
hg19_v2_chr6_+_1312675_1312701	0.122548	HOXD9	ENST00000296839.2|FOXQ1|ENSG00000164379.4|forkhead box Q1
hg19_v2_chr20_+_11008408_11008408	0.119187	HOXD9	ENST00000378252.1|C20orf187|ENSG00000125899.6|chromosome 20 open reading frame 187
hg19_v2_chr1_-_241799232_241799232	0.114851	HOXD9	ENST00000366553.1|CHML|ENSG00000203668.1|choroideremia-like (Rab escort protein 2)
hg19_v2_chr4_+_25915822_25915893	0.113592	HOXD9	ENST00000506197.2|SMIM20|ENSG00000250317.4|small integral membrane protein 20
hg19_v2_chr10_-_49459800_49459841	0.113396	HOXD9	ENST00000305531.3|FRMPD2|ENSG00000170324.15|FERM and PDZ domain containing 2
hg19_v2_chr6_+_31021225_31021277	0.11261	HOXD9	ENST00000565192.1|HCG22|ENSG00000228789.2|HLA complex group 22 	ENST00000562344.1|HCG22|ENSG00000228789.2|HLA complex group 22
hg19_v2_chr11_+_12115543_12115572	0.111718	HOXD9	ENST00000537344.1|MICAL2|ENSG00000133816.9|microtubule associated monooxygenase, calponin and LIM domain containing 2 	ENST00000532179.1|MICAL2|ENSG00000133816.9|microtubule associated monooxygenase, calponin and LIM domain containing 2 	ENST00000526065.1|MICAL2|ENSG00000133816.9|microtubule associated monooxygenase, calponin and LIM domain containing 2
hg19_v2_chrX_+_36053908_36053908	0.110338	HOXD9	ENST00000378660.2|CHDC2|ENSG00000176034.8|calponin homology domain containing 2
hg19_v2_chr4_-_84035905_84035955	0.109794	HOXD9	ENST00000311507.4|PLAC8|ENSG00000145287.6|placenta-specific 8
hg19_v2_chr11_+_123986069_123986169	0.10891	HOXD9	ENST00000456829.2|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000361352.5|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000449321.1|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000392748.1|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000360334.4|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A 	ENST00000392744.4|VWA5A|ENSG00000110002.11|von Willebrand factor A domain containing 5A
hg19_v2_chr7_-_5998714_5998714	0.108408	HOXD9	ENST00000539903.1|RSPH10B|ENSG00000155026.12|radial spoke head 10 homolog B (Chlamydomonas)
hg19_v2_chr8_-_22785404_22785433	0.106704	HOXD9	ENST00000256404.6|PEBP4|ENSG00000134020.6|phosphatidylethanolamine-binding protein 4
hg19_v2_chr11_-_16430399_16430440	0.10574	HOXD9	ENST00000528252.1|SOX6|ENSG00000110693.11|SRY (sex determining region Y)-box 6
hg19_v2_chr14_-_68000442_68000456	0.100894	HOXD9	ENST00000554278.1|TMEM229B|ENSG00000198133.4|transmembrane protein 229B
hg19_v2_chr9_-_21228221_21228221	0.100648	HOXD9	ENST00000413767.2|IFNA17|ENSG00000234829.2|interferon, alpha 17
hg19_v2_chr2_-_191115229_191115258	0.0989864	HOXD9	ENST00000409820.2|HIBCH|ENSG00000198130.10|3-hydroxyisobutyryl-CoA hydrolase 	ENST00000410045.1|HIBCH|ENSG00000198130.10|3-hydroxyisobutyryl-CoA hydrolase
hg19_v2_chr11_-_104905840_104905977	0.0981961	HOXD9	ENST00000526568.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000393136.4|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000531166.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000534497.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000527979.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000446369.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000353247.5|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000528974.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000533400.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000525825.1|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase 	ENST00000436863.3|CASP1|ENSG00000137752.18|caspase 1, apoptosis-related cysteine peptidase
hg19_v2_chr13_+_33160553_33160564	0.0970758	HOXD9	ENST00000315596.10|PDS5B|ENSG00000083642.14|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)
hg19_v2_chr9_-_123812542_123812560	0.0967218	HOXD9	ENST00000223642.1|C5|ENSG00000106804.6|complement component 5
hg19_v2_chr12_-_21927736_21927768	0.0966473	HOXD9	ENST00000240662.2|KCNJ8|ENSG00000121361.3|potassium inwardly-rectifying channel, subfamily J, member 8
hg19_v2_chr4_-_168155700_168155722	0.0953924	HOXD9	ENST00000357545.4|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3 	ENST00000512648.1|SPOCK3|ENSG00000196104.6|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
hg19_v2_chr10_+_5406935_5406972	0.0943269	HOXD9	ENST00000380433.3|UCN3|ENSG00000178473.5|urocortin 3
hg19_v2_chr1_-_213020991_213020991	0.0926602	HOXD9	ENST00000332912.3|C1orf227|ENSG00000185523.6|chromosome 1 open reading frame 227
hg19_v2_chr11_+_92085262_92085262	0.0920317	HOXD9	ENST00000298047.6|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000409404.2|FAT3|ENSG00000165323.11|FAT atypical cadherin 3 	ENST00000541502.1|FAT3|ENSG00000165323.11|FAT atypical cadherin 3
hg19_v2_chrX_-_72434628_72434722	0.0914812	HOXD9	ENST00000536638.1|NAP1L2|ENSG00000186462.7|nucleosome assembly protein 1-like 2 	ENST00000373517.3|NAP1L2|ENSG00000186462.7|nucleosome assembly protein 1-like 2
hg19_v2_chr17_+_75181292_75181298	0.0903134	HOXD9	ENST00000431431.2|SEC14L1|ENSG00000129657.10|SEC14-like 1 (S. cerevisiae)
hg19_v2_chr3_-_167191814_167191842	0.0888207	HOXD9	ENST00000466903.1|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2 	ENST00000264677.4|SERPINI2|ENSG00000114204.10|serpin peptidase inhibitor, clade I (pancpin), member 2
hg19_v2_chr7_+_16793160_16793160	0.0883238	HOXD9	ENST00000262067.4|TSPAN13|ENSG00000106537.7|tetraspanin 13
hg19_v2_chr8_-_86253888_86253944	0.0880312	HOXD9	ENST00000522389.1|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000432364.2|CA1|ENSG00000133742.9|carbonic anhydrase I 	ENST00000517618.1|CA1|ENSG00000133742.9|carbonic anhydrase I
hg19_v2_chr6_-_49712123_49712134	0.0846274	HOXD9	ENST00000263045.4|CRISP3|ENSG00000096006.7|cysteine-rich secretory protein 3
hg19_v2_chr17_-_53809473_53809482	0.0837326	HOXD9	ENST00000575734.1|TMEM100|ENSG00000166292.7|transmembrane protein 100
hg19_v2_chr2_+_109223595_109223617	0.0836849	HOXD9	ENST00000410093.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chrX_+_135730297_135730352	0.0833461	HOXD9	ENST00000370629.2|CD40LG|ENSG00000102245.3|CD40 ligand
hg19_v2_chrX_+_135730373_135730399	0.0831373	HOXD9	ENST00000370628.2|CD40LG|ENSG00000102245.3|CD40 ligand
hg19_v2_chr12_-_15104040_15104114	0.0821093	HOXD9	ENST00000541644.1|ARHGDIB|ENSG00000111348.4|Rho GDP dissociation inhibitor (GDI) beta 	ENST00000545895.1|ARHGDIB|ENSG00000111348.4|Rho GDP dissociation inhibitor (GDI) beta
hg19_v2_chrX_+_99839799_99839938	0.0798435	HOXD9	ENST00000373031.4|TNMD|ENSG00000000005.5|tenomodulin
hg19_v2_chr1_-_67266939_67266939	0.0790737	HOXD9	ENST00000304526.2|INSL5|ENSG00000172410.4|insulin-like 5
hg19_v2_chr12_+_19358228_19358259	0.0784702	HOXD9	ENST00000424268.1|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5 	ENST00000543806.1|PLEKHA5|ENSG00000052126.10|pleckstrin homology domain containing, family A member 5
hg19_v2_chr8_-_80942061_80942086	0.0777061	HOXD9	ENST00000519386.1|MRPS28|ENSG00000147586.5|mitochondrial ribosomal protein S28
hg19_v2_chr2_+_114647504_114647557	0.0769623	HOXD9	ENST00000263238.2|ACTR3|ENSG00000115091.7|ARP3 actin-related protein 3 homolog (yeast)
hg19_v2_chr15_-_45493289_45493373	0.0753398	HOXD9	ENST00000561278.1|SHF|ENSG00000138606.15|Src homology 2 domain containing F 	ENST00000290894.8|SHF|ENSG00000138606.15|Src homology 2 domain containing F
hg19_v2_chr11_-_8986474_8986558	0.0742186	HOXD9	ENST00000525069.1|TMEM9B|ENSG00000175348.6|TMEM9 domain family, member B
hg19_v2_chr21_+_35736302_35736323	0.0741	HOXD9	ENST00000290310.3|KCNE2|ENSG00000159197.3|potassium voltage-gated channel, Isk-related family, member 2
hg19_v2_chr19_+_54619125_54619189	0.0739546	HOXD9	ENST00000445811.1|PRPF31|ENSG00000105618.9|pre-mRNA processing factor 31 	ENST00000419967.1|PRPF31|ENSG00000105618.9|pre-mRNA processing factor 31 	ENST00000445124.1|PRPF31|ENSG00000105618.9|pre-mRNA processing factor 31 	ENST00000447810.1|PRPF31|ENSG00000105618.9|pre-mRNA processing factor 31
hg19_v2_chr8_-_20040638_20040717	0.0738528	HOXD9	ENST00000519026.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000276373.5|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000440926.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000437980.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1
hg19_v2_chr5_-_138775177_138775220	0.0728349	HOXD9	ENST00000302060.5|DNAJC18|ENSG00000170464.5|DnaJ (Hsp40) homolog, subfamily C, member 18
hg19_v2_chr6_-_31632962_31632997	0.0718472	HOXD9	ENST00000456540.1|GPANK1|ENSG00000204438.6|G patch domain and ankyrin repeats 1 	ENST00000445768.1|GPANK1|ENSG00000204438.6|G patch domain and ankyrin repeats 1
hg19_v2_chr6_-_28220002_28220020	0.0712496	HOXD9	ENST00000377294.2|ZKSCAN4|ENSG00000187626.7|zinc finger with KRAB and SCAN domains 4
hg19_v2_chr20_-_35890211_35890238	0.0703884	HOXD9	ENST00000373614.2|GHRH|ENSG00000118702.5|growth hormone releasing hormone
hg19_v2_chrX_-_33229636_33229651	0.0697761	HOXD9	ENST00000357033.4|DMD|ENSG00000198947.10|dystrophin
hg19_v2_chr22_-_32651326_32651340	0.0695976	HOXD9	ENST00000266086.4|SLC5A4|ENSG00000100191.4|solute carrier family 5 (glucose activated ion channel), member 4
hg19_v2_chr5_+_140588269_140588299	0.0694858	HOXD9	ENST00000541609.1|PCDHB12|ENSG00000120328.4|protocadherin beta 12 	ENST00000239450.2|PCDHB12|ENSG00000120328.4|protocadherin beta 12
hg19_v2_chr14_-_67955426_67955460	0.0691552	HOXD9	ENST00000554480.1|TMEM229B|ENSG00000198133.4|transmembrane protein 229B
hg19_v2_chr16_-_66764119_66764138	0.0687036	HOXD9	ENST00000569320.1|DYNC1LI2|ENSG00000135720.8|dynein, cytoplasmic 1, light intermediate chain 2
hg19_v2_chr5_-_96518907_96518997	0.0680839	HOXD9	ENST00000508447.1|RIOK2|ENSG00000058729.6|RIO kinase 2 	ENST00000283109.3|RIOK2|ENSG00000058729.6|RIO kinase 2
hg19_v2_chr13_+_51483814_51483935	0.0662855	HOXD9	ENST00000336617.3|RNASEH2B|ENSG00000136104.14|ribonuclease H2, subunit B 	ENST00000422660.1|RNASEH2B|ENSG00000136104.14|ribonuclease H2, subunit B
hg19_v2_chr17_-_10452929_10452946	0.0660664	HOXD9	ENST00000532183.2|MYH2|ENSG00000125414.14|myosin, heavy chain 2, skeletal muscle, adult 	ENST00000397183.2|MYH2|ENSG00000125414.14|myosin, heavy chain 2, skeletal muscle, adult 	ENST00000420805.1|MYH2|ENSG00000125414.14|myosin, heavy chain 2, skeletal muscle, adult
hg19_v2_chr2_+_145780767_145780811	0.0658768	HOXD9	ENST00000599358.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000596278.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000596747.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000608652.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000609705.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000608432.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000596970.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000602041.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000601578.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000596034.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000414195.2|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000594837.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding)
hg19_v2_chr14_+_81421355_81421387	0.0644363	HOXD9	ENST00000541158.2|TSHR|ENSG00000165409.11|thyroid stimulating hormone receptor
hg19_v2_chr2_-_136594740_136594760	0.064095	HOXD9	ENST00000264162.2|LCT|ENSG00000115850.5|lactase
hg19_v2_chr6_+_131894284_131894378	0.0623184	HOXD9	ENST00000368087.3|ARG1|ENSG00000118520.9|arginase 1 	ENST00000356962.2|ARG1|ENSG00000118520.9|arginase 1
hg19_v2_chr4_+_37455536_37455610	0.0620542	HOXD9	ENST00000381980.4|C4orf19|ENSG00000154274.10|chromosome 4 open reading frame 19 	ENST00000508175.1|C4orf19|ENSG00000154274.10|chromosome 4 open reading frame 19
hg19_v2_chr1_+_44870866_44870960	0.0593345	HOXD9	ENST00000355387.2|RNF220|ENSG00000187147.13|ring finger protein 220 	ENST00000361799.2|RNF220|ENSG00000187147.13|ring finger protein 220
hg19_v2_chr3_+_158991025_158991083	0.0573791	HOXD9	ENST00000337808.6|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough
hg19_v2_chr1_+_78383813_78383829	0.0554802	HOXD9	ENST00000342754.5|NEXN|ENSG00000162614.14|nexilin (F actin binding protein)
hg19_v2_chr3_+_178276488_178276655	0.0551107	HOXD9	ENST00000432997.1|KCNMB2|ENSG00000197584.7|potassium large conductance calcium-activated channel, subfamily M, beta member 2 	ENST00000455865.1|KCNMB2|ENSG00000197584.7|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg19_v2_chr19_+_52800410_52800454	0.0544253	HOXD9	ENST00000595962.1|ZNF480|ENSG00000198464.9|zinc finger protein 480 	ENST00000598016.1|ZNF480|ENSG00000198464.9|zinc finger protein 480 	ENST00000334564.7|ZNF480|ENSG00000198464.9|zinc finger protein 480 	ENST00000490272.1|ZNF480|ENSG00000198464.9|zinc finger protein 480
hg19_v2_chr2_+_145780725_145780735	0.0526344	HOXD9	ENST00000451478.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding)
hg19_v2_chr1_+_197881592_197881635	0.0507439	HOXD9	ENST00000367391.1|LHX9|ENSG00000143355.11|LIM homeobox 9 	ENST00000367390.3|LHX9|ENSG00000143355.11|LIM homeobox 9
hg19_v2_chr12_+_26348246_26348310	0.0504679	HOXD9	ENST00000422622.2|SSPN|ENSG00000123096.7|sarcospan
hg19_v2_chr12_-_88974236_88974256	0.0494518	HOXD9	ENST00000228280.5|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000552044.1|KITLG|ENSG00000049130.9|KIT ligand 	ENST00000357116.4|KITLG|ENSG00000049130.9|KIT ligand
hg19_v2_chr1_+_50459990_50459990	0.048546	HOXD9	ENST00000448346.1|AL645730.2|ENSG00000227839.1|AL645730.2
hg19_v2_chr2_+_1418154_1418194	0.0466375	HOXD9	ENST00000423320.1|TPO|ENSG00000115705.16|thyroid peroxidase 	ENST00000382198.1|TPO|ENSG00000115705.16|thyroid peroxidase
hg19_v2_chr2_+_128458514_128458597	0.0454846	HOXD9	ENST00000310981.4|SFT2D3|ENSG00000173349.4|SFT2 domain containing 3
hg19_v2_chr15_+_49913175_49913178	0.0442725	HOXD9	ENST00000403028.3|DTWD1|ENSG00000104047.10|DTW domain containing 1
hg19_v2_chr8_-_20040601_20040630	0.0438051	HOXD9	ENST00000265808.7|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000522513.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1
hg19_v2_chr7_-_92777606_92777723	0.0420764	HOXD9	ENST00000437805.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000446959.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000439952.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000414791.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000446033.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000411955.1|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like 	ENST00000318238.4|SAMD9L|ENSG00000177409.7|sterile alpha motif domain containing 9-like
hg19_v2_chr2_+_191334212_191334242	0.0370126	HOXD9	ENST00000444317.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000535751.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6
hg19_v2_chr5_+_112043186_112043225	0.0364747	HOXD9	ENST00000509732.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000457016.1|APC|ENSG00000134982.12|adenomatous polyposis coli 	ENST00000507379.1|APC|ENSG00000134982.12|adenomatous polyposis coli
hg19_v2_chr22_-_37213554_37213565	0.0359694	HOXD9	ENST00000443735.1|PVALB|ENSG00000100362.8|parvalbumin
hg19_v2_chr4_-_144826682_144826716	0.0347306	HOXD9	ENST00000358615.4|GYPE|ENSG00000197465.9|glycophorin E (MNS blood group) 	ENST00000437468.2|GYPE|ENSG00000197465.9|glycophorin E (MNS blood group)
hg19_v2_chr15_-_90222610_90222634	0.0345248	HOXD9	ENST00000300055.5|PLIN1|ENSG00000166819.7|perilipin 1
hg19_v2_chr2_-_163695128_163695158	0.0341783	HOXD9	ENST00000332142.5|KCNH7|ENSG00000184611.7|potassium voltage-gated channel, subfamily H (eag-related), member 7
hg19_v2_chr2_+_145425573_145425654	0.0317437	HOXD9	ENST00000600064.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000597670.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000414256.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000599187.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000451774.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000599072.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000596589.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding) 	ENST00000597893.1|TEX41|ENSG00000226674.4|testis expressed 41 (non-protein coding)
hg19_v2_chr5_+_147582387_147582404	0.0317294	HOXD9	ENST00000325630.2|SPINK6|ENSG00000178172.2|serine peptidase inhibitor, Kazal type 6
hg19_v2_chr15_-_90222642_90222658	0.031562	HOXD9	ENST00000430628.2|PLIN1|ENSG00000166819.7|perilipin 1
hg19_v2_chr17_-_73389737_73389765	0.0307188	HOXD9	ENST00000392563.1|GRB2|ENSG00000177885.9|growth factor receptor-bound protein 2
hg19_v2_chr7_-_92855762_92855837	0.0285977	HOXD9	ENST00000453812.2|HEPACAM2|ENSG00000188175.5|HEPACAM family member 2 	ENST00000394468.2|HEPACAM2|ENSG00000188175.5|HEPACAM family member 2
hg19_v2_chr18_-_53069419_53069471	0.0275462	HOXD9	ENST00000570177.2|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr10_-_31146615_31146708	0.0259852	HOXD9	ENST00000444692.2|ZNF438|ENSG00000183621.11|zinc finger protein 438
hg19_v2_chr3_-_99569821_99569919	0.022603	HOXD9	ENST00000487087.1|FILIP1L|ENSG00000168386.14|filamin A interacting protein 1-like
hg19_v2_chr9_-_114090713_114090800	0.0205599	HOXD9	ENST00000302681.1|OR2K2|ENSG00000171133.2|olfactory receptor, family 2, subfamily K, member 2 	ENST00000374428.1|OR2K2|ENSG00000171133.2|olfactory receptor, family 2, subfamily K, member 2
hg19_v2_chr1_-_59043166_59043166	0.0203825	HOXD9	ENST00000371225.2|TACSTD2|ENSG00000184292.5|tumor-associated calcium signal transducer 2
hg19_v2_chr2_+_89986318_89986323	0.0200872	HOXD9	ENST00000491977.1|IGKV2D-29|ENSG00000243264.1|immunoglobulin kappa variable 2D-29
hg19_v2_chr2_-_163695238_163695258	0.0200706	HOXD9	ENST00000328032.4|KCNH7|ENSG00000184611.7|potassium voltage-gated channel, subfamily H (eag-related), member 7
hg19_v2_chrX_+_118602363_118602397	0.0198573	HOXD9	ENST00000317881.8|SLC25A5|ENSG00000005022.5|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5
hg19_v2_chr18_-_22932080_22932170	0.0181291	HOXD9	ENST00000584787.1|ZNF521|ENSG00000198795.6|zinc finger protein 521 	ENST00000361524.3|ZNF521|ENSG00000198795.6|zinc finger protein 521 	ENST00000538137.2|ZNF521|ENSG00000198795.6|zinc finger protein 521
hg19_v2_chr1_+_197237352_197237543	0.0177695	HOXD9	ENST00000538660.1|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila) 	ENST00000367400.3|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila) 	ENST00000367399.2|CRB1|ENSG00000134376.10|crumbs homolog 1 (Drosophila)
hg19_v2_chr4_-_69434245_69434245	0.0154061	HOXD9	ENST00000317746.2|UGT2B17|ENSG00000197888.2|UDP glucuronosyltransferase 2 family, polypeptide B17
hg19_v2_chr19_+_55315059_55315084	0.0151253	HOXD9	ENST00000359085.4|KIR2DL4|ENSG00000189013.10|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 4
hg19_v2_chrX_+_71401570_71401644	0.0138862	HOXD9	ENST00000496835.2|PIN4|ENSG00000102309.8|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin) 	ENST00000446576.1|PIN4|ENSG00000102309.8|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
hg19_v2_chr2_-_136288113_136288301	0.0134015	HOXD9	ENST00000401392.1|ZRANB3|ENSG00000121988.13|zinc finger, RAN-binding domain containing 3
hg19_v2_chr11_+_61957687_61957689	0.012046	HOXD9	ENST00000306238.3|SCGB1D1|ENSG00000168515.3|secretoglobin, family 1D, member 1
hg19_v2_chr1_-_21377383_21377395	0.0114203	HOXD9	ENST00000374935.3|EIF4G3|ENSG00000075151.15|eukaryotic translation initiation factor 4 gamma, 3
hg19_v2_chr17_-_47723943_47723992	0.0111776	HOXD9	ENST00000510476.1|SPOP|ENSG00000121067.13|speckle-type POZ protein 	ENST00000503676.1|SPOP|ENSG00000121067.13|speckle-type POZ protein
hg19_v2_chr6_-_133055815_133055834	0.00937357	HOXD9	ENST00000509351.1|VNN3|ENSG00000093134.9|vanin 3 	ENST00000417437.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000414302.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000423615.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000427187.2|VNN3|ENSG00000093134.9|vanin 3 	ENST00000275223.3|VNN3|ENSG00000093134.9|vanin 3 	ENST00000519686.2|VNN3|ENSG00000093134.9|vanin 3
hg19_v2_chr3_+_107318157_107318172	0.00863399	HOXD9	ENST00000406780.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr3_+_158787041_158787074	0.00792613	HOXD9	ENST00000471575.1|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough 	ENST00000476809.1|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough 	ENST00000485419.1|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough
hg19_v2_chr7_-_107880508_107880522	0.0065418	HOXD9	ENST00000425651.2|NRCAM|ENSG00000091129.15|neuronal cell adhesion molecule
hg19_v2_chr2_+_90198535_90198535	0.00636376	HOXD9	ENST00000390276.2|IGKV1D-12|ENSG00000240834.1|immunoglobulin kappa variable 1D-12
hg19_v2_chr5_+_135496675_135496725	0.00611658	HOXD9	ENST00000507637.1|SMAD5|ENSG00000113658.12|SMAD family member 5
hg19_v2_chr15_-_75748115_75748126	0.006007	HOXD9	ENST00000360439.4|SIN3A|ENSG00000169375.11|SIN3 transcription regulator family member A
hg19_v2_chr8_+_119294456_119294486	0.00596196	HOXD9	ENST00000366457.2|AC023590.1|ENSG00000225885.2|Uncharacterized protein
hg19_v2_chr4_-_39640513_39640529	0.00573801	HOXD9	ENST00000511809.1|SMIM14|ENSG00000163683.7|small integral membrane protein 14 	ENST00000505729.1|SMIM14|ENSG00000163683.7|small integral membrane protein 14
hg19_v2_chr3_+_102153859_102153877	0.00189952	HOXD9	ENST00000306176.1|ZPLD1|ENSG00000170044.4|zona pellucida-like domain containing 1 	ENST00000466937.1|ZPLD1|ENSG00000170044.4|zona pellucida-like domain containing 1
hg19_v2_chr4_-_144940477_144940541	0.00149692	HOXD9	ENST00000513128.1|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group) 	ENST00000429670.2|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group) 	ENST00000502664.1|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group)
hg19_v2_chr3_+_155860751_155860786	0.000686713	HOXD9	ENST00000471742.1|KCNAB1|ENSG00000169282.13|potassium voltage-gated channel, shaker-related subfamily, beta member 1
