hg19_v2_chr16_-_55867146_55867249	1.41699	HOXA9	ENST00000422046.2|CES1|ENSG00000198848.8|carboxylesterase 1
hg19_v2_chr1_-_152131703_152131706	1.2388	HOXA9	ENST00000316073.3|RPTN|ENSG00000215853.3|repetin
hg19_v2_chr12_-_13248598_13248630	0.787037	HOXA9	ENST00000337630.6|GSG1|ENSG00000111305.14|germ cell associated 1 	ENST00000545699.1|GSG1|ENSG00000111305.14|germ cell associated 1
hg19_v2_chr16_-_67427389_67427438	0.731198	HOXA9	ENST00000562206.1|TPPP3|ENSG00000159713.6|tubulin polymerization-promoting protein family member 3 	ENST00000290942.5|TPPP3|ENSG00000159713.6|tubulin polymerization-promoting protein family member 3 	ENST00000393957.2|TPPP3|ENSG00000159713.6|tubulin polymerization-promoting protein family member 3
hg19_v2_chr3_-_197686847_197686894	0.640769	HOXA9	ENST00000265239.6|IQCG|ENSG00000114473.9|IQ motif containing G
hg19_v2_chr1_+_152956549_152956566	0.545578	HOXA9	ENST00000307122.2|SPRR1A|ENSG00000169474.3|small proline-rich protein 1A
hg19_v2_chr10_+_51549498_51549557	0.457485	HOXA9	ENST00000358559.2|MSMB|ENSG00000138294.9|microseminoprotein, beta- 	ENST00000298239.6|MSMB|ENSG00000138294.9|microseminoprotein, beta-
hg19_v2_chrX_+_65384182_65384231	0.413508	HOXA9	ENST00000441993.2|HEPH|ENSG00000089472.12|hephaestin 	ENST00000419594.1|HEPH|ENSG00000089472.12|hephaestin
hg19_v2_chr10_+_85933494_85933568	0.409394	HOXA9	ENST00000372126.3|C10orf99|ENSG00000188373.4|chromosome 10 open reading frame 99
hg19_v2_chr7_-_3214287_3214287	0.406356	HOXA9	ENST00000404626.3|AC091801.1|ENSG00000217455.4|LOC392621; Uncharacterized protein
hg19_v2_chr3_+_186353756_186353761	0.359843	HOXA9	ENST00000431018.1|FETUB|ENSG00000090512.7|fetuin B 	ENST00000450521.1|FETUB|ENSG00000090512.7|fetuin B 	ENST00000539949.1|FETUB|ENSG00000090512.7|fetuin B
hg19_v2_chr2_-_197226875_197226946	0.357351	HOXA9	ENST00000409111.1|HECW2|ENSG00000138411.6|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
hg19_v2_chrX_+_144908928_144908928	0.348525	HOXA9	ENST00000408967.2|TMEM257|ENSG00000221870.2|transmembrane protein 257
hg19_v2_chr2_-_88427568_88427635	0.339267	HOXA9	ENST00000393750.3|FABP1|ENSG00000163586.5|fatty acid binding protein 1, liver 	ENST00000295834.3|FABP1|ENSG00000163586.5|fatty acid binding protein 1, liver
hg19_v2_chr3_+_148545586_148545609	0.332647	HOXA9	ENST00000282957.4|CPB1|ENSG00000153002.7|carboxypeptidase B1 (tissue) 	ENST00000468341.1|CPB1|ENSG00000153002.7|carboxypeptidase B1 (tissue)
hg19_v2_chrX_+_130192318_130192331	0.327874	HOXA9	ENST00000370922.1|ARHGAP36|ENSG00000147256.6|Rho GTPase activating protein 36
hg19_v2_chr11_+_101918153_101918198	0.31478	HOXA9	ENST00000434758.2|C11orf70|ENSG00000137691.8|chromosome 11 open reading frame 70 	ENST00000526781.1|C11orf70|ENSG00000137691.8|chromosome 11 open reading frame 70 	ENST00000534360.1|C11orf70|ENSG00000137691.8|chromosome 11 open reading frame 70
hg19_v2_chr21_-_28820892_28820899	0.310002	HOXA9	ENST00000420186.2|AP001604.3|ENSG00000231236.2|AP001604.3
hg19_v2_chr1_+_24645807_24645819	0.306135	HOXA9	ENST00000361548.4|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chr4_-_34041504_34041540	0.303435	HOXA9	ENST00000512581.1|RP11-79E3.3|ENSG00000250954.1|RP11-79E3.3	ENST00000505018.1|RP11-79E3.3|ENSG00000250954.1|RP11-79E3.3
hg19_v2_chr1_+_24645865_24645881	0.300683	HOXA9	ENST00000342072.4|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chr8_+_76452097_76452126	0.292377	HOXA9	ENST00000396423.2|HNF4G|ENSG00000164749.7|hepatocyte nuclear factor 4, gamma
hg19_v2_chr2_+_232063436_232063467	0.283979	HOXA9	ENST00000440107.1|ARMC9|ENSG00000135931.13|armadillo repeat containing 9
hg19_v2_chr15_-_68497657_68497899	0.283814	HOXA9	ENST00000448060.2|CALML4|ENSG00000129007.10|calmodulin-like 4 	ENST00000467889.1|CALML4|ENSG00000129007.10|calmodulin-like 4
hg19_v2_chr6_-_46138676_46138726	0.282771	HOXA9	ENST00000371383.2|ENPP5|ENSG00000112796.5|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 	ENST00000230565.3|ENPP5|ENSG00000112796.5|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)
hg19_v2_chr11_+_6866883_6866883	0.279202	HOXA9	ENST00000299454.4|OR10A5|ENSG00000166363.4|olfactory receptor, family 10, subfamily A, member 5 	ENST00000379831.2|OR10A5|ENSG00000166363.4|olfactory receptor, family 10, subfamily A, member 5
hg19_v2_chr4_-_150736962_150736980	0.274605	HOXA9	ENST00000502345.1|RP11-526A4.1|ENSG00000234828.3|RP11-526A4.1	ENST00000510975.1|RP11-526A4.1|ENSG00000234828.3|RP11-526A4.1	ENST00000511993.1|RP11-526A4.1|ENSG00000234828.3|RP11-526A4.1
hg19_v2_chr14_-_65769392_65769426	0.268177	HOXA9	ENST00000555736.1|CTD-2509G16.5|ENSG00000258760.1|CTD-2509G16.5
hg19_v2_chr2_+_89986318_89986323	0.267971	HOXA9	ENST00000491977.1|IGKV2D-29|ENSG00000243264.1|immunoglobulin kappa variable 2D-29
hg19_v2_chr3_-_195310802_195310818	0.256739	HOXA9	ENST00000421243.1|APOD|ENSG00000189058.4|apolipoprotein D 	ENST00000453131.1|APOD|ENSG00000189058.4|apolipoprotein D
hg19_v2_chrX_+_65382433_65382486	0.255353	HOXA9	ENST00000374727.3|HEPH|ENSG00000089472.12|hephaestin
hg19_v2_chr14_-_25479811_25479846	0.25194	HOXA9	ENST00000550887.1|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn)
hg19_v2_chr9_-_127269661_127269719	0.243734	HOXA9	ENST00000373588.4|NR5A1|ENSG00000136931.5|nuclear receptor subfamily 5, group A, member 1
hg19_v2_chr15_-_31283618_31283754	0.239476	HOXA9	ENST00000563714.1|MTMR10|ENSG00000166912.12|myotubularin related protein 10
hg19_v2_chr11_+_60048004_60048017	0.238315	HOXA9	ENST00000532114.1|MS4A4A|ENSG00000110079.12|membrane-spanning 4-domains, subfamily A, member 4A
hg19_v2_chr2_+_190541153_190541177	0.231858	HOXA9	ENST00000313581.4|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing 	ENST00000438402.2|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing 	ENST00000431575.2|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing 	ENST00000281412.6|ANKAR|ENSG00000151687.10|ankyrin and armadillo repeat containing
hg19_v2_chr2_+_108994466_108994485	0.231846	HOXA9	ENST00000272452.2|SULT1C4|ENSG00000198075.5|sulfotransferase family, cytosolic, 1C, member 4
hg19_v2_chr5_+_140213815_140213969	0.225603	HOXA9	ENST00000525929.1|PCDHA7|ENSG00000204963.4|protocadherin alpha 7 	ENST00000378125.3|PCDHA7|ENSG00000204963.4|protocadherin alpha 7
hg19_v2_chr4_+_48018781_48018816	0.219837	HOXA9	ENST00000295461.5|NIPAL1|ENSG00000163293.7|NIPA-like domain containing 1
hg19_v2_chr15_+_40643227_40643240	0.216539	HOXA9	ENST00000448599.2|PHGR1|ENSG00000233041.4|proline/histidine/glycine-rich 1
hg19_v2_chr2_+_108994633_108994650	0.216135	HOXA9	ENST00000409309.3|SULT1C4|ENSG00000198075.5|sulfotransferase family, cytosolic, 1C, member 4
hg19_v2_chrX_+_65384052_65384112	0.213194	HOXA9	ENST00000336279.5|HEPH|ENSG00000089472.12|hephaestin 	ENST00000458621.1|HEPH|ENSG00000089472.12|hephaestin
hg19_v2_chr7_-_27169801_27169844	0.21138	HOXA9	ENST00000511914.1|HOXA4|ENSG00000197576.9|homeobox A4
hg19_v2_chr3_-_149510553_149510610	0.20956	HOXA9	ENST00000462519.2|ANKUB1|ENSG00000206199.5|ankyrin repeat and ubiquitin domain containing 1 	ENST00000446160.1|ANKUB1|ENSG00000206199.5|ankyrin repeat and ubiquitin domain containing 1 	ENST00000383050.3|ANKUB1|ENSG00000206199.5|ankyrin repeat and ubiquitin domain containing 1
hg19_v2_chr21_-_19775973_19776107	0.20759	HOXA9	ENST00000284885.3|TMPRSS15|ENSG00000154646.4|transmembrane protease, serine 15
hg19_v2_chr5_+_140602904_140603078	0.201198	HOXA9	ENST00000515856.2|PCDHB14|ENSG00000120327.4|protocadherin beta 14 	ENST00000239449.4|PCDHB14|ENSG00000120327.4|protocadherin beta 14
hg19_v2_chr12_-_59175485_59175529	0.200992	HOXA9	ENST00000550678.1|RP11-767I20.1|ENSG00000257259.1|RP11-767I20.1	ENST00000552201.1|RP11-767I20.1|ENSG00000257259.1|RP11-767I20.1
hg19_v2_chr11_-_76155618_76155676	0.198518	HOXA9	ENST00000530759.1|RP11-111M22.3|ENSG00000255135.3|RP11-111M22.3
hg19_v2_chr22_+_23248512_23248512	0.198492	HOXA9	ENST00000390325.2|IGLC3|ENSG00000211679.2|immunoglobulin lambda constant 3 (Kern-Oz+ marker)
hg19_v2_chr1_+_150254936_150255001	0.198153	HOXA9	ENST00000447007.1|C1orf51|ENSG00000159208.11|chromosome 1 open reading frame 51 	ENST00000369095.1|C1orf51|ENSG00000159208.11|chromosome 1 open reading frame 51 	ENST00000369094.1|C1orf51|ENSG00000159208.11|chromosome 1 open reading frame 51
hg19_v2_chr3_-_190167571_190167665	0.195971	HOXA9	ENST00000354905.2|TMEM207|ENSG00000198398.2|transmembrane protein 207
hg19_v2_chrX_-_45629661_45629677	0.193644	HOXA9	ENST00000602507.1|RP6-99M1.2|ENSG00000270069.1|RP6-99M1.2	ENST00000602461.1|RP6-99M1.2|ENSG00000270069.1|RP6-99M1.2
hg19_v2_chrX_-_110513703_110513751	0.193316	HOXA9	ENST00000324068.1|CAPN6|ENSG00000077274.7|calpain 6
hg19_v2_chr12_+_21207503_21207503	0.18637	HOXA9	ENST00000545916.1|SLCO1B7|ENSG00000205754.6|solute carrier organic anion transporter family, member 1B7 (non-functional)
hg19_v2_chr11_+_27062502_27062512	0.184322	HOXA9	ENST00000263182.3|BBOX1|ENSG00000129151.4|butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1
hg19_v2_chr5_-_101834617_101834710	0.18328	HOXA9	ENST00000513675.1|SLCO6A1|ENSG00000205359.5|solute carrier organic anion transporter family, member 6A1 	ENST00000379807.3|SLCO6A1|ENSG00000205359.5|solute carrier organic anion transporter family, member 6A1
hg19_v2_chr7_-_16505440_16505474	0.183192	HOXA9	ENST00000307068.4|SOSTDC1|ENSG00000171243.7|sclerostin domain containing 1
hg19_v2_chr10_+_82009466_82009466	0.18299	HOXA9	ENST00000356374.4|AL359195.1|ENSG00000204038.3|Uncharacterized protein; cDNA FLJ46261 fis, clone TESTI4025062
hg19_v2_chr8_+_24151620_24151647	0.181608	HOXA9	ENST00000437154.2|ADAM28|ENSG00000042980.8|ADAM metallopeptidase domain 28
hg19_v2_chr6_-_138539627_138539627	0.17676	HOXA9	ENST00000527246.2|PBOV1|ENSG00000254440.2|prostate and breast cancer overexpressed 1
hg19_v2_chr11_-_76155700_76155736	0.176318	HOXA9	ENST00000572035.1|RP11-111M22.3|ENSG00000255135.3|RP11-111M22.3
hg19_v2_chr5_-_101834712_101834736	0.175319	HOXA9	ENST00000506729.1|SLCO6A1|ENSG00000205359.5|solute carrier organic anion transporter family, member 6A1 	ENST00000389019.3|SLCO6A1|ENSG00000205359.5|solute carrier organic anion transporter family, member 6A1 	ENST00000379810.1|SLCO6A1|ENSG00000205359.5|solute carrier organic anion transporter family, member 6A1
hg19_v2_chr1_+_44584522_44584537	0.174955	HOXA9	ENST00000372299.3|KLF17|ENSG00000171872.4|Kruppel-like factor 17
hg19_v2_chr17_+_44370099_44370099	0.174027	HOXA9	ENST00000496930.1|LRRC37A|ENSG00000176681.10|leucine rich repeat containing 37A
hg19_v2_chr3_-_108836977_108836989	0.173958	HOXA9	ENST00000232603.5|MORC1|ENSG00000114487.5|MORC family CW-type zinc finger 1
hg19_v2_chr11_-_108464321_108464380	0.172806	HOXA9	ENST00000265843.4|EXPH5|ENSG00000110723.7|exophilin 5
hg19_v2_chr22_+_30477000_30477000	0.17127	HOXA9	ENST00000403975.1|HORMAD2|ENSG00000176635.13|HORMA domain containing 2
hg19_v2_chr1_+_109256067_109256067	0.169553	HOXA9	ENST00000271311.2|FNDC7|ENSG00000143107.4|fibronectin type III domain containing 7
hg19_v2_chr19_-_52598958_52599026	0.167977	HOXA9	ENST00000594440.1|ZNF841|ENSG00000197608.7|zinc finger protein 841 	ENST00000426391.2|ZNF841|ENSG00000197608.7|zinc finger protein 841 	ENST00000389534.4|ZNF841|ENSG00000197608.7|zinc finger protein 841
hg19_v2_chr16_-_18462221_18462221	0.166917	HOXA9	ENST00000528301.1|RP11-1212A22.4|ENSG00000233024.3|LOC339047 protein; Nuclear pore complex-interacting protein family member A3; Nuclear pore complex-interacting protein family member A5; Protein PKD1P1
hg19_v2_chr11_-_108464465_108464507	0.166505	HOXA9	ENST00000525344.1|EXPH5|ENSG00000110723.7|exophilin 5
hg19_v2_chr2_-_209010874_209010892	0.165694	HOXA9	ENST00000260988.4|CRYGB|ENSG00000182187.3|crystallin, gamma B
hg19_v2_chr1_+_24646002_24646056	0.164968	HOXA9	ENST00000356046.2|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chr5_-_110062349_110062380	0.164748	HOXA9	ENST00000511883.2|TMEM232|ENSG00000186952.10|transmembrane protein 232 	ENST00000455884.2|TMEM232|ENSG00000186952.10|transmembrane protein 232
hg19_v2_chr10_+_102222798_102222798	0.162689	HOXA9	ENST00000343737.5|WNT8B|ENSG00000075290.7|wingless-type MMTV integration site family, member 8B
hg19_v2_chr8_+_24151553_24151590	0.159368	HOXA9	ENST00000265769.4|ADAM28|ENSG00000042980.8|ADAM metallopeptidase domain 28 	ENST00000540823.1|ADAM28|ENSG00000042980.8|ADAM metallopeptidase domain 28 	ENST00000397649.3|ADAM28|ENSG00000042980.8|ADAM metallopeptidase domain 28
hg19_v2_chr14_+_22446680_22446721	0.158935	HOXA9	ENST00000390443.3|TRAV8-6|ENSG00000211795.3|T cell receptor alpha variable 8-6
hg19_v2_chr21_-_46012386_46012386	0.158872	HOXA9	ENST00000400368.1|KRTAP10-6|ENSG00000188155.8|keratin associated protein 10-6
hg19_v2_chr2_+_27799389_27799389	0.158334	HOXA9	ENST00000408964.2|C2orf16|ENSG00000221843.2|chromosome 2 open reading frame 16
hg19_v2_chr15_+_40697988_40698033	0.157912	HOXA9	ENST00000487418.2|IVD|ENSG00000128928.4|isovaleryl-CoA dehydrogenase 	ENST00000479013.2|IVD|ENSG00000128928.4|isovaleryl-CoA dehydrogenase
hg19_v2_chr5_-_33297946_33298016	0.157603	HOXA9	ENST00000510327.1|CTD-2066L21.3|ENSG00000250697.1|CTD-2066L21.3
hg19_v2_chr11_+_27062860_27062929	0.157487	HOXA9	ENST00000528583.1|BBOX1|ENSG00000129151.4|butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1
hg19_v2_chr17_-_8021710_8021831	0.155789	HOXA9	ENST00000380149.1|ALOXE3|ENSG00000179148.5|arachidonate lipoxygenase 3 	ENST00000448843.2|ALOXE3|ENSG00000179148.5|arachidonate lipoxygenase 3
hg19_v2_chr5_-_94417339_94417364	0.15446	HOXA9	ENST00000429576.2|MCTP1|ENSG00000175471.15|multiple C2 domains, transmembrane 1 	ENST00000508509.1|MCTP1|ENSG00000175471.15|multiple C2 domains, transmembrane 1 	ENST00000510732.1|MCTP1|ENSG00000175471.15|multiple C2 domains, transmembrane 1
hg19_v2_chr5_+_149877334_149877354	0.154241	HOXA9	ENST00000523767.1|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr6_-_25832254_25832287	0.151909	HOXA9	ENST00000476801.1|SLC17A1|ENSG00000124568.6|solute carrier family 17 (organic anion transporter), member 1 	ENST00000244527.4|SLC17A1|ENSG00000124568.6|solute carrier family 17 (organic anion transporter), member 1 	ENST00000427328.1|SLC17A1|ENSG00000124568.6|solute carrier family 17 (organic anion transporter), member 1
hg19_v2_chr8_+_38261880_38261931	0.151232	HOXA9	ENST00000527175.1|LETM2|ENSG00000165046.8|leucine zipper-EF-hand containing transmembrane protein 2
hg19_v2_chr5_-_131347306_131347371	0.150826	HOXA9	ENST00000296869.4|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000379249.3|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000379272.2|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000379264.2|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6
hg19_v2_chr11_+_59522837_59522862	0.15041	HOXA9	ENST00000437946.2|STX3|ENSG00000166900.10|syntaxin 3
hg19_v2_chr9_-_21228221_21228221	0.14605	HOXA9	ENST00000413767.2|IFNA17|ENSG00000234829.2|interferon, alpha 17
hg19_v2_chr18_-_72264805_72264841	0.145762	HOXA9	ENST00000577806.1|LINC00909|ENSG00000264247.1|long intergenic non-protein coding RNA 909
hg19_v2_chr15_+_63414760_63414802	0.14412	HOXA9	ENST00000557972.1|LACTB|ENSG00000103642.7|lactamase, beta
hg19_v2_chr4_-_76439483_76439545	0.142981	HOXA9	ENST00000380840.2|RCHY1|ENSG00000163743.9|ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase 	ENST00000513257.1|RCHY1|ENSG00000163743.9|ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase 	ENST00000507014.1|RCHY1|ENSG00000163743.9|ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase
hg19_v2_chr3_+_157154578_157154645	0.141923	HOXA9	ENST00000295927.3|PTX3|ENSG00000163661.3|pentraxin 3, long
hg19_v2_chr16_+_70613770_70613812	0.138411	HOXA9	ENST00000429149.2|IL34|ENSG00000157368.6|interleukin 34 	ENST00000563721.2|IL34|ENSG00000157368.6|interleukin 34
hg19_v2_chr13_+_77522632_77522652	0.136177	HOXA9	ENST00000377462.1|IRG1|ENSG00000102794.5|immunoresponsive 1 homolog (mouse)
hg19_v2_chr1_-_152297679_152297722	0.135357	HOXA9	ENST00000368799.1|FLG|ENSG00000143631.10|filaggrin
hg19_v2_chr2_+_208423840_208423851	0.134444	HOXA9	ENST00000539789.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr7_-_144107320_144107320	0.133198	HOXA9	ENST00000483238.1|NOBOX|ENSG00000106410.10|NOBOX oogenesis homeobox 	ENST00000467773.1|NOBOX|ENSG00000106410.10|NOBOX oogenesis homeobox
hg19_v2_chr1_-_36948879_36948879	0.132769	HOXA9	ENST00000373106.1|CSF3R|ENSG00000119535.13|colony stimulating factor 3 receptor (granulocyte) 	ENST00000373104.1|CSF3R|ENSG00000119535.13|colony stimulating factor 3 receptor (granulocyte) 	ENST00000373103.1|CSF3R|ENSG00000119535.13|colony stimulating factor 3 receptor (granulocyte)
hg19_v2_chr7_-_92855762_92855837	0.131918	HOXA9	ENST00000453812.2|HEPACAM2|ENSG00000188175.5|HEPACAM family member 2 	ENST00000394468.2|HEPACAM2|ENSG00000188175.5|HEPACAM family member 2
hg19_v2_chr22_-_30642782_30642840	0.131385	HOXA9	ENST00000249075.3|LIF|ENSG00000128342.4|leukemia inhibitory factor
hg19_v2_chr12_-_52779433_52779437	0.130178	HOXA9	ENST00000257951.3|KRT84|ENSG00000161849.3|keratin 84
hg19_v2_chr6_-_27775694_27775714	0.129018	HOXA9	ENST00000377401.2|HIST1H2BL|ENSG00000185130.4|histone cluster 1, H2bl
hg19_v2_chr10_+_91092241_91092294	0.128611	HOXA9	ENST00000371811.4|IFIT3|ENSG00000119917.9|interferon-induced protein with tetratricopeptide repeats 3
hg19_v2_chr10_-_71176623_71176638	0.12845	HOXA9	ENST00000373306.4|TACR2|ENSG00000075073.10|tachykinin receptor 2
hg19_v2_chr14_+_88471468_88471500	0.127827	HOXA9	ENST00000267549.3|GPR65|ENSG00000140030.4|G protein-coupled receptor 65
hg19_v2_chr19_-_50529193_50529381	0.127613	HOXA9	ENST00000596445.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000599538.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3
hg19_v2_chr10_+_96698406_96698428	0.127364	HOXA9	ENST00000260682.6|CYP2C9|ENSG00000138109.9|cytochrome P450, family 2, subfamily C, polypeptide 9
hg19_v2_chr3_+_178276488_178276655	0.126192	HOXA9	ENST00000432997.1|KCNMB2|ENSG00000197584.7|potassium large conductance calcium-activated channel, subfamily M, beta member 2 	ENST00000455865.1|KCNMB2|ENSG00000197584.7|potassium large conductance calcium-activated channel, subfamily M, beta member 2
hg19_v2_chr3_-_196911002_196911116	0.125314	HOXA9	ENST00000452595.1|DLG1|ENSG00000075711.16|discs, large homolog 1 (Drosophila)
hg19_v2_chr12_-_57472522_57472556	0.12503	HOXA9	ENST00000379391.3|TMEM194A|ENSG00000166881.5|transmembrane protein 194A 	ENST00000300128.4|TMEM194A|ENSG00000166881.5|transmembrane protein 194A
hg19_v2_chr15_+_65134088_65134147	0.124816	HOXA9	ENST00000323544.4|PLEKHO2|ENSG00000241839.5|pleckstrin homology domain containing, family O member 2 	ENST00000437723.1|AC069368.3|ENSG00000249240.2|Uncharacterized protein
hg19_v2_chr8_+_7693993_7693993	0.124622	HOXA9	ENST00000314265.2|DEFB104A|ENSG00000176782.2|defensin, beta 104A
hg19_v2_chr22_+_23077065_23077095	0.124168	HOXA9	ENST00000390310.2|IGLV2-18|ENSG00000211664.2|immunoglobulin lambda variable 2-18
hg19_v2_chr11_+_27062272_27062392	0.123824	HOXA9	ENST00000529202.1|BBOX1|ENSG00000129151.4|butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1 	ENST00000533566.1|BBOX1|ENSG00000129151.4|butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1
hg19_v2_chr1_+_180897269_180897295	0.11957	HOXA9	ENST00000367587.1|KIAA1614|ENSG00000135835.6|KIAA1614
hg19_v2_chr12_-_121476959_121477003	0.11773	HOXA9	ENST00000339275.5|OASL|ENSG00000135114.8|2'-5'-oligoadenylate synthetase-like
hg19_v2_chr15_-_41166414_41166487	0.117267	HOXA9	ENST00000220507.4|RHOV|ENSG00000104140.6|ras homolog family member V
hg19_v2_chr7_+_21582638_21582833	0.117078	HOXA9	ENST00000409508.3|DNAH11|ENSG00000105877.13|dynein, axonemal, heavy chain 11 	ENST00000328843.6|DNAH11|ENSG00000105877.13|dynein, axonemal, heavy chain 11
hg19_v2_chr1_+_226250379_226250427	0.117052	HOXA9	ENST00000366815.3|H3F3A|ENSG00000163041.5|H3 histone, family 3A 	ENST00000366814.3|H3F3A|ENSG00000163041.5|H3 histone, family 3A
hg19_v2_chr11_+_71927807_71927875	0.116563	HOXA9	ENST00000298223.6|FOLR2|ENSG00000165457.9|folate receptor 2 (fetal) 	ENST00000454954.2|FOLR2|ENSG00000165457.9|folate receptor 2 (fetal) 	ENST00000541003.1|FOLR2|ENSG00000165457.9|folate receptor 2 (fetal) 	ENST00000539412.1|FOLR2|ENSG00000165457.9|folate receptor 2 (fetal) 	ENST00000536778.1|FOLR2|ENSG00000165457.9|folate receptor 2 (fetal) 	ENST00000535625.1|FOLR2|ENSG00000165457.9|folate receptor 2 (fetal) 	ENST00000321324.7|FOLR2|ENSG00000165457.9|folate receptor 2 (fetal)
hg19_v2_chr18_-_72265035_72265077	0.115962	HOXA9	ENST00000585279.1|LINC00909|ENSG00000264247.1|long intergenic non-protein coding RNA 909 	ENST00000580048.1|LINC00909|ENSG00000264247.1|long intergenic non-protein coding RNA 909
hg19_v2_chr10_-_45474237_45474264	0.114891	HOXA9	ENST00000448778.1|C10orf10|ENSG00000165507.8|chromosome 10 open reading frame 10 	ENST00000298295.3|C10orf10|ENSG00000165507.8|chromosome 10 open reading frame 10
hg19_v2_chr1_-_43282906_43282931	0.11177	HOXA9	ENST00000372521.4|CCDC23|ENSG00000177868.7|coiled-coil domain containing 23
hg19_v2_chr8_+_145215928_145215928	0.1116	HOXA9	ENST00000528919.1|MROH1|ENSG00000179832.13|maestro heat-like repeat family member 1
hg19_v2_chr11_-_59951889_59951902	0.111519	HOXA9	ENST00000532169.1|MS4A6A|ENSG00000110077.10|membrane-spanning 4-domains, subfamily A, member 6A 	ENST00000534596.1|MS4A6A|ENSG00000110077.10|membrane-spanning 4-domains, subfamily A, member 6A
hg19_v2_chr2_+_20646824_20646844	0.111282	HOXA9	ENST00000272233.4|RHOB|ENSG00000143878.8|ras homolog family member B
hg19_v2_chr22_+_22930626_22930649	0.111156	HOXA9	ENST00000390302.2|IGLV2-33|ENSG00000211656.2|immunoglobulin lambda variable 2-33 (non-functional)
hg19_v2_chr10_+_47894572_47894572	0.110657	HOXA9	ENST00000355876.5|FAM21B|ENSG00000152726.14|family with sequence similarity 21, member B
hg19_v2_chr4_-_159644507_159644584	0.110534	HOXA9	ENST00000307720.3|PPID|ENSG00000171497.4|peptidylprolyl isomerase D
hg19_v2_chr11_-_119066545_119066584	0.108149	HOXA9	ENST00000415318.1|CCDC153|ENSG00000248712.3|coiled-coil domain containing 153
hg19_v2_chr13_+_52586517_52586559	0.108007	HOXA9	ENST00000523764.1|ALG11|ENSG00000253710.1|ALG11, alpha-1,2-mannosyltransferase 	ENST00000521508.1|ALG11|ENSG00000253710.1|ALG11, alpha-1,2-mannosyltransferase
hg19_v2_chr6_+_24126350_24126497	0.108	HOXA9	ENST00000378491.4|NRSN1|ENSG00000152954.7|neurensin 1 	ENST00000378478.1|NRSN1|ENSG00000152954.7|neurensin 1 	ENST00000378477.2|NRSN1|ENSG00000152954.7|neurensin 1
hg19_v2_chr4_+_110834033_110834047	0.107379	HOXA9	ENST00000509793.1|EGF|ENSG00000138798.7|epidermal growth factor 	ENST00000265171.5|EGF|ENSG00000138798.7|epidermal growth factor
hg19_v2_chr8_-_7332604_7332604	0.10591	HOXA9	ENST00000316169.2|DEFB104B|ENSG00000177023.2|defensin, beta 104B
hg19_v2_chr14_-_106453155_106453176	0.105468	HOXA9	ENST00000390594.2|IGHV1-2|ENSG00000211934.2|immunoglobulin heavy variable 1-2
hg19_v2_chr6_+_18155560_18155624	0.103641	HOXA9	ENST00000546309.2|KDM1B|ENSG00000165097.9|lysine (K)-specific demethylase 1B 	ENST00000388870.2|KDM1B|ENSG00000165097.9|lysine (K)-specific demethylase 1B 	ENST00000397244.1|KDM1B|ENSG00000165097.9|lysine (K)-specific demethylase 1B
hg19_v2_chr2_+_11864458_11864481	0.103117	HOXA9	ENST00000396098.1|LPIN1|ENSG00000134324.7|lipin 1 	ENST00000396099.1|LPIN1|ENSG00000134324.7|lipin 1 	ENST00000425416.2|LPIN1|ENSG00000134324.7|lipin 1
hg19_v2_chr8_-_25281747_25281779	0.103112	HOXA9	ENST00000421054.2|GNRH1|ENSG00000147437.5|gonadotropin-releasing hormone 1 (luteinizing-releasing hormone)
hg19_v2_chr1_-_85100703_85100703	0.10199	HOXA9	ENST00000370624.1|C1orf180|ENSG00000180869.3|chromosome 1 open reading frame 180
hg19_v2_chr5_+_126984710_126984752	0.100818	HOXA9	ENST00000379445.3|CTXN3|ENSG00000205279.4|cortexin 3
hg19_v2_chr9_+_78505581_78505621	0.0993999	HOXA9	ENST00000376767.3|PCSK5|ENSG00000099139.9|proprotein convertase subtilisin/kexin type 5 	ENST00000376752.4|PCSK5|ENSG00000099139.9|proprotein convertase subtilisin/kexin type 5
hg19_v2_chr9_+_2029019_2029164	0.0982016	HOXA9	ENST00000382194.1|SMARCA2|ENSG00000080503.15|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
hg19_v2_chrX_+_95939711_95939786	0.0981626	HOXA9	ENST00000373049.4|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2 	ENST00000324765.8|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2
hg19_v2_chr21_+_37507210_37507361	0.0981141	HOXA9	ENST00000290354.5|CBR3|ENSG00000159231.5|carbonyl reductase 3
hg19_v2_chr9_-_21207142_21207142	0.0978959	HOXA9	ENST00000357374.2|IFNA10|ENSG00000186803.3|interferon, alpha 10
hg19_v2_chr6_+_35310312_35310359	0.0974915	HOXA9	ENST00000448077.2|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000360694.3|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000418635.2|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000444397.1|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta
hg19_v2_chr1_+_50575292_50575378	0.096035	HOXA9	ENST00000371821.1|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4 	ENST00000371819.1|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4
hg19_v2_chr7_+_20370746_20370778	0.0959551	HOXA9	ENST00000222573.4|ITGB8|ENSG00000105855.5|integrin, beta 8
hg19_v2_chrX_-_110655306_110655330	0.0957587	HOXA9	ENST00000371993.2|DCX|ENSG00000077279.12|doublecortin
hg19_v2_chr8_+_52730143_52730143	0.0957171	HOXA9	ENST00000415643.1|AC090186.1|ENSG00000232941.1|Uncharacterized protein
hg19_v2_chr11_-_3400330_3400422	0.0952107	HOXA9	ENST00000427810.2|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000005082.9|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000534569.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000438262.2|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000528796.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000528410.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000529678.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000354599.6|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000526601.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000525502.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000533036.1|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000399602.4|ZNF195|ENSG00000005801.12|zinc finger protein 195
hg19_v2_chr7_+_54609995_54610018	0.0947295	HOXA9	ENST00000302287.3|VSTM2A|ENSG00000170419.6|V-set and transmembrane domain containing 2A 	ENST00000407838.3|VSTM2A|ENSG00000170419.6|V-set and transmembrane domain containing 2A
hg19_v2_chr12_-_121477039_121477054	0.0945676	HOXA9	ENST00000257570.5|OASL|ENSG00000135114.8|2'-5'-oligoadenylate synthetase-like
hg19_v2_chr3_-_151047327_151047343	0.093384	HOXA9	ENST00000325602.5|P2RY13|ENSG00000181631.6|purinergic receptor P2Y, G-protein coupled, 13
hg19_v2_chr17_-_29624343_29624429	0.09316	HOXA9	ENST00000247271.4|OMG|ENSG00000126861.4|oligodendrocyte myelin glycoprotein
hg19_v2_chr5_-_94417314_94417337	0.092213	HOXA9	ENST00000505208.1|MCTP1|ENSG00000175471.15|multiple C2 domains, transmembrane 1
hg19_v2_chr5_+_175490540_175490540	0.091348	HOXA9	ENST00000515817.1|FAM153B|ENSG00000182230.7|family with sequence similarity 153, member B
hg19_v2_chr14_-_24911448_24911659	0.0907137	HOXA9	ENST00000555355.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1 	ENST00000553343.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1 	ENST00000556523.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1 	ENST00000556249.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1 	ENST00000538105.2|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1 	ENST00000555225.1|SDR39U1|ENSG00000100445.12|short chain dehydrogenase/reductase family 39U, member 1
hg19_v2_chr14_+_77582905_77582916	0.0902139	HOXA9	ENST00000557408.1|TMEM63C|ENSG00000165548.6|transmembrane protein 63C
hg19_v2_chr3_+_119298523_119298644	0.0899419	HOXA9	ENST00000357003.3|ADPRH|ENSG00000144843.7|ADP-ribosylarginine hydrolase
hg19_v2_chr14_-_31926623_31926656	0.089771	HOXA9	ENST00000356180.4|DTD2|ENSG00000129480.8|D-tyrosyl-tRNA deacylase 2 (putative)
hg19_v2_chrX_+_30248553_30248553	0.0883417	HOXA9	ENST00000361644.2|MAGEB3|ENSG00000198798.4|melanoma antigen family B, 3
hg19_v2_chr9_-_21202204_21202204	0.0883013	HOXA9	ENST00000239347.3|IFNA7|ENSG00000214042.1|interferon, alpha 7
hg19_v2_chr1_-_7913089_7913096	0.0877432	HOXA9	ENST00000361696.5|UTS2|ENSG00000049247.9|urotensin 2
hg19_v2_chr11_-_3400442_3400453	0.0873967	HOXA9	ENST00000429541.2|ZNF195|ENSG00000005801.12|zinc finger protein 195 	ENST00000532539.1|ZNF195|ENSG00000005801.12|zinc finger protein 195
hg19_v2_chr1_+_101185290_101185320	0.0873181	HOXA9	ENST00000370119.4|VCAM1|ENSG00000162692.6|vascular cell adhesion molecule 1 	ENST00000347652.2|VCAM1|ENSG00000162692.6|vascular cell adhesion molecule 1 	ENST00000294728.2|VCAM1|ENSG00000162692.6|vascular cell adhesion molecule 1 	ENST00000370115.1|VCAM1|ENSG00000162692.6|vascular cell adhesion molecule 1
hg19_v2_chr10_+_24755416_24755470	0.0865135	HOXA9	ENST00000396446.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000396445.1|KIAA1217|ENSG00000120549.11|KIAA1217 	ENST00000376451.2|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr3_+_108321623_108321698	0.0857581	HOXA9	ENST00000497905.1|DZIP3|ENSG00000198919.8|DAZ interacting zinc finger protein 3 	ENST00000463306.1|DZIP3|ENSG00000198919.8|DAZ interacting zinc finger protein 3
hg19_v2_chr11_-_5345582_5345582	0.0853802	HOXA9	ENST00000328813.2|OR51B2|ENSG00000184881.2|olfactory receptor, family 51, subfamily B, member 2
hg19_v2_chr1_+_166958346_166958375	0.085101	HOXA9	ENST00000367872.4|MAEL|ENSG00000143194.8|maelstrom spermatogenic transposon silencer
hg19_v2_chr7_+_69064566_69064597	0.0838447	HOXA9	ENST00000403018.2|AUTS2|ENSG00000158321.11|autism susceptibility candidate 2
hg19_v2_chr17_+_57297807_57297923	0.0837965	HOXA9	ENST00000284116.4|GDPD1|ENSG00000153982.6|glycerophosphodiester phosphodiesterase domain containing 1 	ENST00000581140.1|GDPD1|ENSG00000153982.6|glycerophosphodiester phosphodiesterase domain containing 1 	ENST00000581276.1|GDPD1|ENSG00000153982.6|glycerophosphodiester phosphodiesterase domain containing 1
hg19_v2_chr12_-_91573316_91573365	0.0836138	HOXA9	ENST00000393155.1|DCN|ENSG00000011465.12|decorin
hg19_v2_chr3_+_120626919_120627161	0.0828706	HOXA9	ENST00000273666.6|STXBP5L|ENSG00000145087.8|syntaxin binding protein 5-like 	ENST00000471454.1|STXBP5L|ENSG00000145087.8|syntaxin binding protein 5-like 	ENST00000472879.1|STXBP5L|ENSG00000145087.8|syntaxin binding protein 5-like 	ENST00000497029.1|STXBP5L|ENSG00000145087.8|syntaxin binding protein 5-like 	ENST00000492541.1|STXBP5L|ENSG00000145087.8|syntaxin binding protein 5-like
hg19_v2_chr3_-_58613323_58613342	0.0821625	HOXA9	ENST00000474531.1|FAM107A|ENSG00000168309.12|family with sequence similarity 107, member A 	ENST00000465970.1|FAM107A|ENSG00000168309.12|family with sequence similarity 107, member A
hg19_v2_chr9_+_78505554_78505573	0.0818478	HOXA9	ENST00000545128.1|PCSK5|ENSG00000099139.9|proprotein convertase subtilisin/kexin type 5
hg19_v2_chr14_+_23938891_23938953	0.0816584	HOXA9	ENST00000408901.3|NGDN|ENSG00000129460.11|neuroguidin, EIF4E binding protein 	ENST00000397154.3|NGDN|ENSG00000129460.11|neuroguidin, EIF4E binding protein 	ENST00000555128.1|NGDN|ENSG00000129460.11|neuroguidin, EIF4E binding protein
hg19_v2_chr6_-_133035185_133035201	0.0812889	HOXA9	ENST00000367928.4|VNN1|ENSG00000112299.7|vanin 1
hg19_v2_chr16_-_21868739_21868739	0.0809955	HOXA9	ENST00000415645.2|NPIPB4|ENSG00000185864.12|nuclear pore complex interacting protein family, member B4
hg19_v2_chr7_-_99332719_99332820	0.080896	HOXA9	ENST00000336374.2|CYP3A7|ENSG00000160870.8|cytochrome P450, family 3, subfamily A, polypeptide 7
hg19_v2_chr1_-_92951607_92951661	0.0808332	HOXA9	ENST00000427103.1|GFI1|ENSG00000162676.7|growth factor independent 1 transcription repressor
hg19_v2_chr15_+_45315302_45315440	0.0805782	HOXA9	ENST00000267814.9|SORD|ENSG00000140263.9|sorbitol dehydrogenase
hg19_v2_chr1_-_43282945_43283016	0.0802952	HOXA9	ENST00000537227.1|CCDC23|ENSG00000177868.7|coiled-coil domain containing 23
hg19_v2_chr18_+_3466248_3466312	0.0801669	HOXA9	ENST00000581029.1|RP11-838N2.4|ENSG00000266835.1|RP11-838N2.4	ENST00000581442.1|RP11-838N2.4|ENSG00000266835.1|RP11-838N2.4	ENST00000579007.1|RP11-838N2.4|ENSG00000266835.1|RP11-838N2.4
hg19_v2_chr5_+_5422778_5422841	0.0799058	HOXA9	ENST00000296564.7|KIAA0947|ENSG00000164151.7|KIAA0947
hg19_v2_chr10_+_24738355_24738380	0.07984	HOXA9	ENST00000307544.6|KIAA1217|ENSG00000120549.11|KIAA1217
hg19_v2_chr1_-_38512450_38512474	0.0793778	HOXA9	ENST00000373012.2|POU3F1|ENSG00000185668.5|POU class 3 homeobox 1
hg19_v2_chr17_+_7758374_7758390	0.079356	HOXA9	ENST00000301599.6|TMEM88|ENSG00000167874.6|transmembrane protein 88 	ENST00000574668.1|TMEM88|ENSG00000167874.6|transmembrane protein 88
hg19_v2_chr15_+_94899183_94899203	0.0783995	HOXA9	ENST00000557742.1|MCTP2|ENSG00000140563.10|multiple C2 domains, transmembrane 2
hg19_v2_chr2_+_138721850_138721890	0.078187	HOXA9	ENST00000329366.4|HNMT|ENSG00000150540.9|histamine N-methyltransferase 	ENST00000280097.3|HNMT|ENSG00000150540.9|histamine N-methyltransferase
hg19_v2_chr5_-_180288248_180288291	0.0776155	HOXA9	ENST00000512132.1|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein 	ENST00000506439.1|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein 	ENST00000502412.1|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein 	ENST00000359141.6|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein
hg19_v2_chr21_+_44313375_44313388	0.077592	HOXA9	ENST00000354250.2|NDUFV3|ENSG00000160194.13|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa 	ENST00000340344.4|NDUFV3|ENSG00000160194.13|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa
hg19_v2_chr3_-_151176497_151176497	0.0775739	HOXA9	ENST00000282466.3|IGSF10|ENSG00000152580.8|immunoglobulin superfamily, member 10
hg19_v2_chr6_+_35310391_35310410	0.0773235	HOXA9	ENST00000337400.2|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000311565.4|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta 	ENST00000540939.1|PPARD|ENSG00000112033.9|peroxisome proliferator-activated receptor delta
hg19_v2_chr19_+_8455077_8455083	0.0760462	HOXA9	ENST00000328024.6|RAB11B|ENSG00000185236.7|RAB11B, member RAS oncogene family
hg19_v2_chr5_-_150138061_150138083	0.0759313	HOXA9	ENST00000521533.1|DCTN4|ENSG00000132912.8|dynactin 4 (p62) 	ENST00000424236.1|DCTN4|ENSG00000132912.8|dynactin 4 (p62)
hg19_v2_chrX_-_13338518_13338518	0.075702	HOXA9	ENST00000380622.2|ATXN3L|ENSG00000123594.3|ataxin 3-like
hg19_v2_chr17_-_39165366_39165381	0.0756348	HOXA9	ENST00000391588.1|KRTAP3-1|ENSG00000212901.2|keratin associated protein 3-1
hg19_v2_chr2_+_182850551_182850607	0.0756345	HOXA9	ENST00000452904.1|PPP1R1C|ENSG00000150722.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENST00000409137.3|PPP1R1C|ENSG00000150722.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C 	ENST00000280295.3|PPP1R1C|ENSG00000150722.6|protein phosphatase 1, regulatory (inhibitor) subunit 1C
hg19_v2_chr11_-_35441597_35441613	0.075449	HOXA9	ENST00000395753.1|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr4_-_102267953_102268104	0.0742723	HOXA9	ENST00000523694.2|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme 	ENST00000507176.1|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme
hg19_v2_chr3_+_57875738_57875802	0.0734278	HOXA9	ENST00000417128.1|SLMAP|ENSG00000163681.10|sarcolemma associated protein 	ENST00000438794.1|SLMAP|ENSG00000163681.10|sarcolemma associated protein
hg19_v2_chr3_-_183273477_183273504	0.0724703	HOXA9	ENST00000341319.3|KLHL6|ENSG00000172578.7|kelch-like family member 6
hg19_v2_chr6_-_88876058_88876078	0.072442	HOXA9	ENST00000369501.2|CNR1|ENSG00000118432.11|cannabinoid receptor 1 (brain)
hg19_v2_chr2_-_154335300_154335322	0.07108	HOXA9	ENST00000325926.3|RPRM|ENSG00000177519.3|reprimo, TP53 dependent G2 arrest mediator candidate
hg19_v2_chr18_-_10701979_10701979	0.0704108	HOXA9	ENST00000538948.1|PIEZO2|ENSG00000154864.7|piezo-type mechanosensitive ion channel component 2 	ENST00000285141.4|PIEZO2|ENSG00000154864.7|piezo-type mechanosensitive ion channel component 2
hg19_v2_chr4_+_146539415_146539415	0.0703359	HOXA9	ENST00000281317.5|MMAA|ENSG00000151611.9|methylmalonic aciduria (cobalamin deficiency) cblA type
hg19_v2_chr11_-_8959758_8959758	0.0699137	HOXA9	ENST00000531618.1|ASCL3|ENSG00000176009.2|achaete-scute family bHLH transcription factor 3
hg19_v2_chr18_+_63417864_63417889	0.068927	HOXA9	ENST00000536984.2|CDH7|ENSG00000081138.9|cadherin 7, type 2
hg19_v2_chr20_-_48782639_48782743	0.0682092	HOXA9	ENST00000435301.2|RP11-112L6.3|ENSG00000237595.2|RP11-112L6.3
hg19_v2_chr1_-_234614849_234614872	0.0677924	HOXA9	ENST00000040877.1|TARBP1|ENSG00000059588.5|TAR (HIV-1) RNA binding protein 1
hg19_v2_chr1_-_11024258_11024258	0.0677701	HOXA9	ENST00000418570.2|C1orf127|ENSG00000175262.10|chromosome 1 open reading frame 127
hg19_v2_chr19_+_37341752_37341816	0.0675727	HOXA9	ENST00000586933.1|ZNF345|ENSG00000251247.5|zinc finger protein 345 	ENST00000532141.1|ZNF345|ENSG00000251247.5|zinc finger protein 345 	ENST00000420450.1|ZNF345|ENSG00000251247.5|zinc finger protein 345 	ENST00000526123.1|ZNF345|ENSG00000251247.5|zinc finger protein 345
hg19_v2_chr2_+_238600933_238600985	0.0674571	HOXA9	ENST00000420665.1|LRRFIP1|ENSG00000124831.14|leucine rich repeat (in FLII) interacting protein 1 	ENST00000392000.4|LRRFIP1|ENSG00000124831.14|leucine rich repeat (in FLII) interacting protein 1
hg19_v2_chr11_-_59952106_59952158	0.0673517	HOXA9	ENST00000529054.1|MS4A6A|ENSG00000110077.10|membrane-spanning 4-domains, subfamily A, member 6A 	ENST00000530839.1|MS4A6A|ENSG00000110077.10|membrane-spanning 4-domains, subfamily A, member 6A
hg19_v2_chr14_+_78870030_78870098	0.0670438	HOXA9	ENST00000553631.1|NRXN3|ENSG00000021645.13|neurexin 3 	ENST00000554719.1|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chr1_+_61869748_61869782	0.0669691	HOXA9	ENST00000357977.5|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr4_-_70080449_70080449	0.0660844	HOXA9	ENST00000446444.1|UGT2B11|ENSG00000213759.4|UDP glucuronosyltransferase 2 family, polypeptide B11
hg19_v2_chr15_+_93749295_93749295	0.0659606	HOXA9	ENST00000599897.1|AC112693.2|ENSG00000269360.1|AC112693.2
hg19_v2_chr12_-_71148413_71148515	0.0656259	HOXA9	ENST00000440835.2|PTPRR|ENSG00000153233.8|protein tyrosine phosphatase, receptor type, R 	ENST00000549308.1|PTPRR|ENSG00000153233.8|protein tyrosine phosphatase, receptor type, R 	ENST00000550661.1|PTPRR|ENSG00000153233.8|protein tyrosine phosphatase, receptor type, R
hg19_v2_chr21_-_31852663_31852688	0.0642458	HOXA9	ENST00000390689.2|KRTAP19-1|ENSG00000184351.7|keratin associated protein 19-1
hg19_v2_chr16_-_20338748_20338902	0.0641125	HOXA9	ENST00000575582.1|GP2|ENSG00000169347.12|glycoprotein 2 (zymogen granule membrane) 	ENST00000341642.5|GP2|ENSG00000169347.12|glycoprotein 2 (zymogen granule membrane) 	ENST00000381362.4|GP2|ENSG00000169347.12|glycoprotein 2 (zymogen granule membrane) 	ENST00000572347.1|GP2|ENSG00000169347.12|glycoprotein 2 (zymogen granule membrane) 	ENST00000572478.1|GP2|ENSG00000169347.12|glycoprotein 2 (zymogen granule membrane) 	ENST00000302555.5|GP2|ENSG00000169347.12|glycoprotein 2 (zymogen granule membrane)
hg19_v2_chr9_-_21239978_21239978	0.0637884	HOXA9	ENST00000380222.2|IFNA14|ENSG00000228083.1|interferon, alpha 14
hg19_v2_chr7_-_80141328_80141339	0.0626403	HOXA9	ENST00000398291.3|GNAT3|ENSG00000214415.3|guanine nucleotide binding protein, alpha transducing 3
hg19_v2_chr1_+_192127578_192127613	0.0623767	HOXA9	ENST00000367460.3|RGS18|ENSG00000150681.5|regulator of G-protein signaling 18
hg19_v2_chr15_+_33022885_33022907	0.0622557	HOXA9	ENST00000322805.4|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist
hg19_v2_chr2_-_225811747_225811796	0.0617029	HOXA9	ENST00000409592.3|DOCK10|ENSG00000135905.14|dedicator of cytokinesis 10
hg19_v2_chr8_+_20831460_20831497	0.0608877	HOXA9	ENST00000522604.1|RP11-421P23.1|ENSG00000253199.1|RP11-421P23.1
hg19_v2_chr16_+_12058961_12058966	0.0605928	HOXA9	ENST00000053243.1|TNFRSF17|ENSG00000048462.6|tumor necrosis factor receptor superfamily, member 17
hg19_v2_chr19_-_42133420_42133450	0.0599448	HOXA9	ENST00000221954.2|CEACAM4|ENSG00000105352.6|carcinoembryonic antigen-related cell adhesion molecule 4 	ENST00000600925.1|CEACAM4|ENSG00000105352.6|carcinoembryonic antigen-related cell adhesion molecule 4
hg19_v2_chr19_+_21579958_21579975	0.0585698	HOXA9	ENST00000339914.6|ZNF493|ENSG00000196268.7|zinc finger protein 493 	ENST00000599461.1|ZNF493|ENSG00000196268.7|zinc finger protein 493
hg19_v2_chr15_+_59730348_59730435	0.0581835	HOXA9	ENST00000288228.5|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A 	ENST00000559628.1|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A 	ENST00000557914.1|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A 	ENST00000560474.1|FAM81A|ENSG00000157470.7|family with sequence similarity 81, member A
hg19_v2_chr16_-_52119019_52119021	0.0577113	HOXA9	ENST00000561513.1|LINC00919|ENSG00000260268.1|long intergenic non-protein coding RNA 919 	ENST00000565742.1|LINC00919|ENSG00000260268.1|long intergenic non-protein coding RNA 919
hg19_v2_chr3_+_197687071_197687128	0.0572981	HOXA9	ENST00000482695.1|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000330198.4|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000419117.1|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000420910.2|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family) 	ENST00000332636.5|LMLN|ENSG00000185621.7|leishmanolysin-like (metallopeptidase M8 family)
hg19_v2_chr22_-_31324215_31324215	0.0572774	HOXA9	ENST00000429468.1|MORC2|ENSG00000133422.8|MORC family CW-type zinc finger 2
hg19_v2_chr1_-_35658736_35658754	0.0571105	HOXA9	ENST00000357214.5|SFPQ|ENSG00000116560.6|splicing factor proline/glutamine-rich
hg19_v2_chr8_+_16884740_16884804	0.056791	HOXA9	ENST00000318063.5|MICU3|ENSG00000155970.7|mitochondrial calcium uptake family, member 3
hg19_v2_chr19_-_18314836_18314884	0.0563386	HOXA9	ENST00000464076.3|RAB3A|ENSG00000105649.5|RAB3A, member RAS oncogene family 	ENST00000222256.4|RAB3A|ENSG00000105649.5|RAB3A, member RAS oncogene family
hg19_v2_chr2_+_32502952_32503025	0.0556041	HOXA9	ENST00000238831.4|YIPF4|ENSG00000119820.6|Yip1 domain family, member 4
hg19_v2_chr19_-_48547294_48547342	0.0554835	HOXA9	ENST00000293255.2|CABP5|ENSG00000105507.2|calcium binding protein 5
hg19_v2_chr11_+_57310114_57310116	0.0542966	HOXA9	ENST00000527972.1|SMTNL1|ENSG00000214872.4|smoothelin-like 1 	ENST00000399154.2|SMTNL1|ENSG00000214872.4|smoothelin-like 1
hg19_v2_chr1_-_152552980_152552998	0.0531992	HOXA9	ENST00000368787.3|LCE3D|ENSG00000163202.4|late cornified envelope 3D
hg19_v2_chr14_+_97925151_97925207	0.052783	HOXA9	ENST00000554862.1|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1	ENST00000554260.1|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1	ENST00000499910.2|CTD-2506J14.1|ENSG00000246084.2|CTD-2506J14.1
hg19_v2_chr3_-_72149553_72149606	0.0523879	HOXA9	ENST00000468646.2|LINC00877|ENSG00000241163.3|long intergenic non-protein coding RNA 877 	ENST00000464271.1|LINC00877|ENSG00000241163.3|long intergenic non-protein coding RNA 877
hg19_v2_chr10_+_51572339_51572376	0.0519586	HOXA9	ENST00000344348.6|NCOA4|ENSG00000138293.15|nuclear receptor coactivator 4
hg19_v2_chr22_+_42475692_42475721	0.0516129	HOXA9	ENST00000331479.3|SMDT1|ENSG00000183172.8|single-pass membrane protein with aspartate-rich tail 1
hg19_v2_chr10_+_51572408_51572454	0.051293	HOXA9	ENST00000374082.1|NCOA4|ENSG00000138293.15|nuclear receptor coactivator 4
hg19_v2_chr6_-_29399744_29399744	0.0511355	HOXA9	ENST00000377154.1|OR5V1|ENSG00000243729.3|olfactory receptor, family 5, subfamily V, member 1
hg19_v2_chr10_+_124320156_124320181	0.0508786	HOXA9	ENST00000338354.3|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000344338.3|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000330163.4|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000368909.3|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000368955.3|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1 	ENST00000368956.2|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1
hg19_v2_chr7_+_120628731_120628818	0.0507089	HOXA9	ENST00000310396.5|CPED1|ENSG00000106034.13|cadherin-like and PC-esterase domain containing 1
hg19_v2_chr3_-_8811288_8811314	0.0504076	HOXA9	ENST00000316793.3|OXTR|ENSG00000180914.6|oxytocin receptor 	ENST00000431493.1|OXTR|ENSG00000180914.6|oxytocin receptor
hg19_v2_chr9_-_104198042_104198105	0.0503976	HOXA9	ENST00000374855.4|ALDOB|ENSG00000136872.13|aldolase B, fructose-bisphosphate
hg19_v2_chr16_+_12059050_12059079	0.04936	HOXA9	ENST00000396495.3|TNFRSF17|ENSG00000048462.6|tumor necrosis factor receptor superfamily, member 17
hg19_v2_chr10_-_96829246_96829259	0.0492575	HOXA9	ENST00000371270.3|CYP2C8|ENSG00000138115.9|cytochrome P450, family 2, subfamily C, polypeptide 8 	ENST00000535898.1|CYP2C8|ENSG00000138115.9|cytochrome P450, family 2, subfamily C, polypeptide 8 	ENST00000539050.1|CYP2C8|ENSG00000138115.9|cytochrome P450, family 2, subfamily C, polypeptide 8
hg19_v2_chr4_-_176733897_176733906	0.0490124	HOXA9	ENST00000393658.2|GPM6A|ENSG00000150625.12|glycoprotein M6A
hg19_v2_chr16_-_20339123_20339130	0.0489921	HOXA9	ENST00000381360.5|GP2|ENSG00000169347.12|glycoprotein 2 (zymogen granule membrane)
hg19_v2_chrX_-_72434628_72434722	0.0487562	HOXA9	ENST00000536638.1|NAP1L2|ENSG00000186462.7|nucleosome assembly protein 1-like 2 	ENST00000373517.3|NAP1L2|ENSG00000186462.7|nucleosome assembly protein 1-like 2
hg19_v2_chr15_+_67418047_67418093	0.048102	HOXA9	ENST00000540846.2|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chr1_-_205819245_205819272	0.0473068	HOXA9	ENST00000367136.4|PM20D1|ENSG00000162877.8|peptidase M20 domain containing 1
hg19_v2_chr8_-_18666360_18666410	0.0472241	HOXA9	ENST00000286485.8|PSD3|ENSG00000156011.12|pleckstrin and Sec7 domain containing 3
hg19_v2_chr2_-_130031335_130031421	0.0470685	HOXA9	ENST00000375987.3|AC079586.1|ENSG00000204460.3|AC079586.1
hg19_v2_chr6_+_26365443_26365503	0.0468414	HOXA9	ENST00000527422.1|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000356386.2|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000396934.3|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000377708.2|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000396948.1|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000508906.2|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2
hg19_v2_chr12_+_56414795_56414836	0.045841	HOXA9	ENST00000431367.2|IKZF4|ENSG00000123411.10|IKAROS family zinc finger 4 (Eos)
hg19_v2_chr16_+_29690358_29690507	0.0456126	HOXA9	ENST00000395384.4|QPRT|ENSG00000103485.13|quinolinate phosphoribosyltransferase 	ENST00000562473.1|QPRT|ENSG00000103485.13|quinolinate phosphoribosyltransferase
hg19_v2_chr14_-_31926701_31926734	0.0442946	HOXA9	ENST00000310850.4|DTD2|ENSG00000129480.8|D-tyrosyl-tRNA deacylase 2 (putative)
hg19_v2_chr5_-_177210399_177210399	0.0434281	HOXA9	ENST00000510276.1|FAM153A|ENSG00000170074.15|family with sequence similarity 153, member A
hg19_v2_chr22_-_31364187_31364284	0.0428958	HOXA9	ENST00000215862.4|MORC2|ENSG00000133422.8|MORC family CW-type zinc finger 2 	ENST00000397641.3|MORC2|ENSG00000133422.8|MORC family CW-type zinc finger 2
hg19_v2_chr8_-_13372253_13372282	0.0426946	HOXA9	ENST00000316609.5|DLC1|ENSG00000164741.10|deleted in liver cancer 1
hg19_v2_chr12_-_121476750_121476790	0.0426594	HOXA9	ENST00000543677.1|OASL|ENSG00000135114.8|2'-5'-oligoadenylate synthetase-like
hg19_v2_chr17_+_73996987_73996987	0.0424168	HOXA9	ENST00000588812.1|CDK3|ENSG00000250506.2|cyclin-dependent kinase 3 	ENST00000448471.1|CDK3|ENSG00000250506.2|cyclin-dependent kinase 3
hg19_v2_chr2_+_171571827_171571861	0.0413405	HOXA9	ENST00000375281.3|SP5|ENSG00000204335.3|Sp5 transcription factor
hg19_v2_chr15_-_52030293_52030341	0.0412572	HOXA9	ENST00000560491.1|LYSMD2|ENSG00000140280.9|LysM, putative peptidoglycan-binding, domain containing 2 	ENST00000267838.3|LYSMD2|ENSG00000140280.9|LysM, putative peptidoglycan-binding, domain containing 2
hg19_v2_chr12_+_15475462_15475487	0.0406999	HOXA9	ENST00000543886.1|PTPRO|ENSG00000151490.9|protein tyrosine phosphatase, receptor type, O 	ENST00000348962.2|PTPRO|ENSG00000151490.9|protein tyrosine phosphatase, receptor type, O
hg19_v2_chr9_-_27529726_27529827	0.0403378	HOXA9	ENST00000262244.5|MOB3B|ENSG00000120162.9|MOB kinase activator 3B
hg19_v2_chr7_+_44084233_44084244	0.0401998	HOXA9	ENST00000448521.1|DBNL|ENSG00000136279.14|drebrin-like
hg19_v2_chr16_+_16434185_16434185	0.0401164	HOXA9	ENST00000524823.2|AC138969.4|ENSG00000183889.8|Protein PKD1P1
hg19_v2_chr20_-_48732472_48732501	0.0399824	HOXA9	ENST00000340309.3|UBE2V1|ENSG00000244687.7|ubiquitin-conjugating enzyme E2 variant 1 	ENST00000415862.2|UBE2V1|ENSG00000244687.7|ubiquitin-conjugating enzyme E2 variant 1 	ENST00000371677.3|UBE2V1|ENSG00000244687.7|ubiquitin-conjugating enzyme E2 variant 1 	ENST00000420027.2|UBE2V1|ENSG00000244687.7|ubiquitin-conjugating enzyme E2 variant 1
hg19_v2_chr2_+_103089756_103089768	0.0395584	HOXA9	ENST00000295269.4|SLC9A4|ENSG00000180251.4|solute carrier family 9, subfamily A (NHE4, cation proton antiporter 4), member 4
hg19_v2_chr10_+_60759378_60759409	0.0391557	HOXA9	ENST00000432535.1|LINC00844|ENSG00000237949.1|long intergenic non-protein coding RNA 844
hg19_v2_chr14_+_88490894_88490962	0.0390922	HOXA9	ENST00000556033.1|RP11-300J18.3|ENSG00000258867.1|long intergenic non-protein coding RNA 1146 	ENST00000553929.1|RP11-300J18.3|ENSG00000258867.1|long intergenic non-protein coding RNA 1146 	ENST00000555996.1|RP11-300J18.3|ENSG00000258867.1|long intergenic non-protein coding RNA 1146 	ENST00000556673.1|RP11-300J18.3|ENSG00000258867.1|long intergenic non-protein coding RNA 1146 	ENST00000557339.1|RP11-300J18.3|ENSG00000258867.1|long intergenic non-protein coding RNA 1146 	ENST00000556684.1|RP11-300J18.3|ENSG00000258867.1|long intergenic non-protein coding RNA 1146
hg19_v2_chr4_+_187187337_187187369	0.039023	HOXA9	ENST00000492972.2|F11|ENSG00000088926.9|coagulation factor XI
hg19_v2_chr10_+_124320195_124320216	0.038843	HOXA9	ENST00000359586.6|DMBT1|ENSG00000187908.11|deleted in malignant brain tumors 1
hg19_v2_chr20_-_2821756_2821836	0.0388217	HOXA9	ENST00000356872.3|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A 	ENST00000439542.1|PCED1A|ENSG00000132635.12|PC-esterase domain containing 1A
hg19_v2_chr17_-_48943706_48943723	0.0381178	HOXA9	ENST00000499247.2|TOB1|ENSG00000141232.4|transducer of ERBB2, 1
hg19_v2_chr5_+_176731572_176731689	0.0376996	HOXA9	ENST00000503853.1|PRELID1|ENSG00000169230.5|PRELI domain containing 1
hg19_v2_chrX_+_95939638_95939662	0.0365061	HOXA9	ENST00000373061.3|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2 	ENST00000373054.4|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2 	ENST00000355827.4|DIAPH2|ENSG00000147202.13|diaphanous-related formin 2
hg19_v2_chrX_-_130037198_130037234	0.036346	HOXA9	ENST00000370935.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000338144.3|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000394363.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2
hg19_v2_chr2_-_99870744_99870744	0.0354049	HOXA9	ENST00000409238.1|LYG2|ENSG00000185674.5|lysozyme G-like 2 	ENST00000423800.1|LYG2|ENSG00000185674.5|lysozyme G-like 2
hg19_v2_chr1_+_101702417_101702481	0.035057	HOXA9	ENST00000305352.6|S1PR1|ENSG00000170989.8|sphingosine-1-phosphate receptor 1
hg19_v2_chr20_+_43211149_43211266	0.0350328	HOXA9	ENST00000372886.1|PKIG|ENSG00000168734.9|protein kinase (cAMP-dependent, catalytic) inhibitor gamma
hg19_v2_chr14_+_38264418_38264513	0.0350207	HOXA9	ENST00000267368.7|TTC6|ENSG00000139865.12|tetratricopeptide repeat domain 6 	ENST00000382320.3|TTC6|ENSG00000139865.12|tetratricopeptide repeat domain 6
hg19_v2_chr22_+_22749343_22749360	0.0348318	HOXA9	ENST00000390298.2|IGLV7-43|ENSG00000211652.2|immunoglobulin lambda variable 7-43
hg19_v2_chr18_+_5748793_5748820	0.0347017	HOXA9	ENST00000566533.1|RP11-945C19.1|ENSG00000261738.2|RP11-945C19.1	ENST00000562452.2|RP11-945C19.1|ENSG00000261738.2|RP11-945C19.1
hg19_v2_chr20_-_17539456_17539605	0.0344307	HOXA9	ENST00000544874.1|BFSP1|ENSG00000125864.7|beaded filament structural protein 1, filensin 	ENST00000377868.2|BFSP1|ENSG00000125864.7|beaded filament structural protein 1, filensin
hg19_v2_chr4_+_154074217_154074270	0.0343488	HOXA9	ENST00000437508.2|TRIM2|ENSG00000109654.10|tripartite motif containing 2
hg19_v2_chr12_-_371994_372039	0.03384	HOXA9	ENST00000343164.4|SLC6A13|ENSG00000010379.11|solute carrier family 6 (neurotransmitter transporter), member 13 	ENST00000436453.1|SLC6A13|ENSG00000010379.11|solute carrier family 6 (neurotransmitter transporter), member 13 	ENST00000445055.2|SLC6A13|ENSG00000010379.11|solute carrier family 6 (neurotransmitter transporter), member 13 	ENST00000546319.1|SLC6A13|ENSG00000010379.11|solute carrier family 6 (neurotransmitter transporter), member 13
hg19_v2_chr19_+_50528971_50529063	0.0331946	HOXA9	ENST00000598809.1|ZNF473|ENSG00000142528.11|zinc finger protein 473 	ENST00000595661.1|ZNF473|ENSG00000142528.11|zinc finger protein 473 	ENST00000391821.2|ZNF473|ENSG00000142528.11|zinc finger protein 473
hg19_v2_chr17_+_73663402_73663456	0.0331447	HOXA9	ENST00000355423.3|SAP30BP|ENSG00000161526.10|SAP30 binding protein
hg19_v2_chr19_-_1650666_1650744	0.0329061	HOXA9	ENST00000588136.1|TCF3|ENSG00000071564.10|transcription factor 3
hg19_v2_chr12_-_118796910_118796943	0.0327714	HOXA9	ENST00000541186.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000539872.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr9_-_21166659_21166659	0.0325277	HOXA9	ENST00000380225.1|IFNA21|ENSG00000137080.4|interferon, alpha 21
hg19_v2_chr18_+_32558208_32558340	0.0322775	HOXA9	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr1_-_22109682_22109719	0.0322643	HOXA9	ENST00000400301.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48 	ENST00000532737.1|USP48|ENSG00000090686.11|ubiquitin specific peptidase 48
hg19_v2_chr4_-_110723134_110723181	0.0321041	HOXA9	ENST00000510800.1|CFI|ENSG00000205403.8|complement factor I 	ENST00000512148.1|CFI|ENSG00000205403.8|complement factor I
hg19_v2_chr16_-_89556942_89557020	0.0320536	HOXA9	ENST00000301030.4|ANKRD11|ENSG00000167522.10|ankyrin repeat domain 11
hg19_v2_chr2_-_98280383_98280570	0.031752	HOXA9	ENST00000289228.5|ACTR1B|ENSG00000115073.6|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)
hg19_v2_chr7_+_143657027_143657027	0.0313258	HOXA9	ENST00000392899.1|OR2F1|ENSG00000213215.1|olfactory receptor, family 2, subfamily F, member 1 (gene/pseudogene)
hg19_v2_chr3_+_108541608_108541624	0.0313195	HOXA9	ENST00000426646.1|TRAT1|ENSG00000163519.9|T cell receptor associated transmembrane adaptor 1
hg19_v2_chr19_-_50528584_50528670	0.0305359	HOXA9	ENST00000594092.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000443401.2|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000594948.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000377011.2|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000593919.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000601324.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000316763.3|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000601341.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3 	ENST00000600259.1|VRK3|ENSG00000105053.6|vaccinia related kinase 3
hg19_v2_chr11_+_64085560_64085736	0.0304831	HOXA9	ENST00000265462.4|PRDX5|ENSG00000126432.9|peroxiredoxin 5 	ENST00000352435.4|PRDX5|ENSG00000126432.9|peroxiredoxin 5 	ENST00000347941.4|PRDX5|ENSG00000126432.9|peroxiredoxin 5
hg19_v2_chr6_+_63921351_63921386	0.0303307	HOXA9	ENST00000370659.1|FKBP1C|ENSG00000198225.4|FK506 binding protein 1C
hg19_v2_chr9_-_21187598_21187598	0.0297138	HOXA9	ENST00000421715.1|IFNA4|ENSG00000236637.1|interferon, alpha 4
hg19_v2_chr17_-_39890893_39890898	0.0290618	HOXA9	ENST00000393939.2|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000347901.4|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000341193.5|HAP1|ENSG00000173805.11|huntingtin-associated protein 1 	ENST00000310778.5|HAP1|ENSG00000173805.11|huntingtin-associated protein 1
hg19_v2_chr19_-_47975417_47975441	0.0290299	HOXA9	ENST00000236877.6|SLC8A2|ENSG00000118160.9|solute carrier family 8 (sodium/calcium exchanger), member 2
hg19_v2_chr11_-_35440796_35440916	0.0288955	HOXA9	ENST00000278379.3|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr11_-_22647350_22647396	0.0288101	HOXA9	ENST00000327470.3|FANCF|ENSG00000183161.3|Fanconi anemia, complementation group F
hg19_v2_chr1_+_192544857_192544912	0.0283623	HOXA9	ENST00000367459.3|RGS1|ENSG00000090104.7|regulator of G-protein signaling 1 	ENST00000469578.2|RGS1|ENSG00000090104.7|regulator of G-protein signaling 1
hg19_v2_chr22_+_32754139_32754139	0.0271978	HOXA9	ENST00000382088.3|RFPL3|ENSG00000128276.6|ret finger protein-like 3
hg19_v2_chr14_-_78174344_78174381	0.0268918	HOXA9	ENST00000216489.3|ALKBH1|ENSG00000100601.5|alkB, alkylation repair homolog 1 (E. coli)
hg19_v2_chr4_-_100356291_100356446	0.0268612	HOXA9	ENST00000476959.1|ADH7|ENSG00000196344.7|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide 	ENST00000482593.1|ADH7|ENSG00000196344.7|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
hg19_v2_chr16_+_70557685_70557796	0.0265312	HOXA9	ENST00000302516.5|SF3B3|ENSG00000189091.8|splicing factor 3b, subunit 3, 130kDa 	ENST00000566095.2|SF3B3|ENSG00000189091.8|splicing factor 3b, subunit 3, 130kDa 	ENST00000577085.1|SF3B3|ENSG00000189091.8|splicing factor 3b, subunit 3, 130kDa 	ENST00000567654.1|SF3B3|ENSG00000189091.8|splicing factor 3b, subunit 3, 130kDa
hg19_v2_chr6_+_126240442_126240459	0.0258952	HOXA9	ENST00000448104.1|NCOA7|ENSG00000111912.14|nuclear receptor coactivator 7 	ENST00000438495.1|NCOA7|ENSG00000111912.14|nuclear receptor coactivator 7 	ENST00000444128.1|NCOA7|ENSG00000111912.14|nuclear receptor coactivator 7
hg19_v2_chr4_-_74088800_74088844	0.0257095	HOXA9	ENST00000509867.2|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17
hg19_v2_chr11_+_19138670_19138732	0.0256658	HOXA9	ENST00000446113.2|ZDHHC13|ENSG00000177054.9|zinc finger, DHHC-type containing 13 	ENST00000399351.3|ZDHHC13|ENSG00000177054.9|zinc finger, DHHC-type containing 13
hg19_v2_chr16_-_70557430_70557469	0.0250581	HOXA9	ENST00000393612.4|COG4|ENSG00000103051.14|component of oligomeric golgi complex 4 	ENST00000564653.1|COG4|ENSG00000103051.14|component of oligomeric golgi complex 4 	ENST00000323786.5|COG4|ENSG00000103051.14|component of oligomeric golgi complex 4
hg19_v2_chr1_-_23340400_23340517	0.0246474	HOXA9	ENST00000440767.2|C1orf234|ENSG00000227868.2|chromosome 1 open reading frame 234
hg19_v2_chr4_+_102711874_102711898	0.0244481	HOXA9	ENST00000508653.1|BANK1|ENSG00000153064.7|B-cell scaffold protein with ankyrin repeats 1
hg19_v2_chr7_+_55177416_55177550	0.024436	HOXA9	ENST00000450046.1|EGFR|ENSG00000146648.11|epidermal growth factor receptor 	ENST00000454757.2|EGFR|ENSG00000146648.11|epidermal growth factor receptor
hg19_v2_chr3_+_57875711_57875735	0.0243466	HOXA9	ENST00000442599.2|SLMAP|ENSG00000163681.10|sarcolemma associated protein
hg19_v2_chr6_+_152011628_152011642	0.0242271	HOXA9	ENST00000404742.1|ESR1|ENSG00000091831.17|estrogen receptor 1 	ENST00000440973.1|ESR1|ENSG00000091831.17|estrogen receptor 1
hg19_v2_chr1_-_154127518_154127592	0.0233915	HOXA9	ENST00000368559.3|NUP210L|ENSG00000143552.5|nucleoporin 210kDa-like 	ENST00000271854.3|NUP210L|ENSG00000143552.5|nucleoporin 210kDa-like
hg19_v2_chr1_+_52082751_52082781	0.0232739	HOXA9	ENST00000447887.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000435686.2|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000428468.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000453295.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9
hg19_v2_chr11_+_34664014_34664174	0.0232333	HOXA9	ENST00000527935.1|EHF|ENSG00000135373.8|ets homologous factor
hg19_v2_chr13_+_53602894_53602924	0.0230274	HOXA9	ENST00000219022.2|OLFM4|ENSG00000102837.6|olfactomedin 4
hg19_v2_chr1_+_104615595_104615645	0.0224359	HOXA9	ENST00000418362.1|RP11-364B6.1|ENSG00000215869.3|RP11-364B6.1
hg19_v2_chr7_-_14880892_14881075	0.022268	HOXA9	ENST00000406247.3|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa 	ENST00000399322.3|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa 	ENST00000258767.5|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa
hg19_v2_chr6_-_74231444_74231623	0.0220573	HOXA9	ENST00000331523.2|EEF1A1|ENSG00000156508.13|eukaryotic translation elongation factor 1 alpha 1 	ENST00000356303.2|EEF1A1|ENSG00000156508.13|eukaryotic translation elongation factor 1 alpha 1
hg19_v2_chr19_+_50529212_50529297	0.0216378	HOXA9	ENST00000270617.3|ZNF473|ENSG00000142528.11|zinc finger protein 473 	ENST00000445728.3|ZNF473|ENSG00000142528.11|zinc finger protein 473 	ENST00000601364.1|ZNF473|ENSG00000142528.11|zinc finger protein 473
hg19_v2_chr13_-_30881134_30881181	0.0211035	HOXA9	ENST00000380617.3|KATNAL1|ENSG00000102781.9|katanin p60 subunit A-like 1 	ENST00000441394.1|KATNAL1|ENSG00000102781.9|katanin p60 subunit A-like 1
hg19_v2_chr2_-_224467093_224467221	0.0207333	HOXA9	ENST00000305409.2|SCG2|ENSG00000171951.4|secretogranin II
hg19_v2_chr12_+_25205666_25205690	0.020229	HOXA9	ENST00000547044.1|LRMP|ENSG00000118308.10|lymphoid-restricted membrane protein
hg19_v2_chrX_+_70503433_70503517	0.0198811	HOXA9	ENST00000276079.8|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000373856.3|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000373841.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding 	ENST00000420903.1|NONO|ENSG00000147140.11|non-POU domain containing, octamer-binding
hg19_v2_chr1_+_73771844_73771922	0.0195419	HOXA9	ENST00000440762.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1	ENST00000444827.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1	ENST00000415686.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1	ENST00000411903.1|RP4-598G3.1|ENSG00000233973.1|RP4-598G3.1
hg19_v2_chr10_-_14050522_14050584	0.0194716	HOXA9	ENST00000342409.2|FRMD4A|ENSG00000151474.15|FERM domain containing 4A
hg19_v2_chr7_+_86781847_86781879	0.0194546	HOXA9	ENST00000432366.2|DMTF1|ENSG00000135164.14|cyclin D binding myb-like transcription factor 1 	ENST00000423590.2|DMTF1|ENSG00000135164.14|cyclin D binding myb-like transcription factor 1 	ENST00000394703.5|DMTF1|ENSG00000135164.14|cyclin D binding myb-like transcription factor 1
hg19_v2_chr3_+_26664291_26664329	0.0191329	HOXA9	ENST00000396641.2|LRRC3B|ENSG00000179796.7|leucine rich repeat containing 3B
hg19_v2_chr13_+_76445187_76445187	0.019123	HOXA9	ENST00000318245.4|C13orf45|ENSG00000178734.4|chromosome 13 open reading frame 45
hg19_v2_chr16_+_67063855_67063873	0.0187063	HOXA9	ENST00000563939.2|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr2_-_225434538_225434545	0.0183422	HOXA9	ENST00000409096.1|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr2_+_232063260_232063424	0.0181288	HOXA9	ENST00000349938.4|ARMC9|ENSG00000135931.13|armadillo repeat containing 9
hg19_v2_chr4_-_110723194_110723207	0.0178333	HOXA9	ENST00000394635.3|CFI|ENSG00000205403.8|complement factor I
hg19_v2_chr3_+_119298429_119298454	0.0175683	HOXA9	ENST00000478927.1|ADPRH|ENSG00000144843.7|ADP-ribosylarginine hydrolase
hg19_v2_chr19_-_41985048_41985051	0.0173771	HOXA9	ENST00000599801.1|AC011526.1|ENSG00000267107.2|AC011526.1	ENST00000595063.1|AC011526.1|ENSG00000267107.2|AC011526.1	ENST00000598215.1|AC011526.1|ENSG00000267107.2|AC011526.1
hg19_v2_chr4_-_70518941_70518967	0.0167499	HOXA9	ENST00000286604.4|UGT2A1|ENSG00000173610.7|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus 	ENST00000505512.1|UGT2A1|ENSG00000173610.7|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus 	ENST00000514019.1|UGT2A1|ENSG00000270386.1|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus
hg19_v2_chr1_-_243326612_243326642	0.0165546	HOXA9	ENST00000492145.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa 	ENST00000490813.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa 	ENST00000464936.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr15_+_52121822_52121833	0.0163344	HOXA9	ENST00000558455.1|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous) 	ENST00000308580.7|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous)
hg19_v2_chr16_+_72088376_72088537	0.0162813	HOXA9	ENST00000570083.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000355906.5|HP|ENSG00000257017.4|haptoglobin 	ENST00000398131.2|HP|ENSG00000257017.4|haptoglobin 	ENST00000569639.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000356967.5|HPR|ENSG00000261701.2|haptoglobin-related protein 	ENST00000564499.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000357763.4|HP|ENSG00000257017.4|haptoglobin 	ENST00000562526.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000565574.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000568417.2|HP|ENSG00000257017.4|haptoglobin
hg19_v2_chr11_-_64546202_64546258	0.0159166	HOXA9	ENST00000377390.3|SF1|ENSG00000168066.16|splicing factor 1 	ENST00000227503.9|SF1|ENSG00000168066.16|splicing factor 1 	ENST00000377394.3|SF1|ENSG00000168066.16|splicing factor 1 	ENST00000422298.2|SF1|ENSG00000168066.16|splicing factor 1 	ENST00000334944.5|SF1|ENSG00000168066.16|splicing factor 1
hg19_v2_chr18_+_21033239_21033302	0.0151051	HOXA9	ENST00000581585.1|RIOK3|ENSG00000101782.10|RIO kinase 3 	ENST00000577501.1|RIOK3|ENSG00000101782.10|RIO kinase 3
hg19_v2_chr11_-_35441524_35441578	0.0150933	HOXA9	ENST00000395750.1|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2 	ENST00000449068.1|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr12_+_25205568_25205599	0.0147895	HOXA9	ENST00000548766.1|LRMP|ENSG00000118308.10|lymphoid-restricted membrane protein 	ENST00000556887.1|LRMP|ENSG00000118308.10|lymphoid-restricted membrane protein
hg19_v2_chr4_+_70796784_70796799	0.0146937	HOXA9	ENST00000246891.4|CSN1S1|ENSG00000126545.9|casein alpha s1 	ENST00000444405.3|CSN1S1|ENSG00000126545.9|casein alpha s1
hg19_v2_chr9_+_21440440_21440440	0.014583	HOXA9	ENST00000276927.1|IFNA1|ENSG00000197919.3|interferon, alpha 1
hg19_v2_chr19_-_6424783_6424805	0.0142472	HOXA9	ENST00000398148.3|KHSRP|ENSG00000088247.11|KH-type splicing regulatory protein
hg19_v2_chr2_+_128377550_128377603	0.0138417	HOXA9	ENST00000437387.1|MYO7B|ENSG00000169994.14|myosin VIIB 	ENST00000409090.1|MYO7B|ENSG00000169994.14|myosin VIIB
hg19_v2_chr2_+_102608306_102608413	0.0137923	HOXA9	ENST00000332549.3|IL1R2|ENSG00000115590.9|interleukin 1 receptor, type II
hg19_v2_chr15_-_49338748_49338765	0.0136574	HOXA9	ENST00000559471.1|SECISBP2L|ENSG00000138593.4|SECIS binding protein 2-like
hg19_v2_chr10_+_15001430_15001440	0.0134273	HOXA9	ENST00000407572.1|MEIG1|ENSG00000197889.5|meiosis/spermiogenesis associated 1
hg19_v2_chr11_+_57529234_57529338	0.0133973	HOXA9	ENST00000360682.6|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000361796.4|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000529526.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000426142.2|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000399050.4|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000361391.6|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000361332.4|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000532463.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000529986.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000358694.6|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000532787.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000533667.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000532649.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000528621.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000530748.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000428599.2|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000527467.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000528232.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000531014.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000526772.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000529873.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000525902.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000532844.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000526357.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000530094.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000415361.2|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000532245.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000534579.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1 	ENST00000526938.1|CTNND1|ENSG00000198561.8|catenin (cadherin-associated protein), delta 1
hg19_v2_chr6_+_99282570_99282591	0.0133561	HOXA9	ENST00000328345.5|POU3F2|ENSG00000184486.7|POU class 3 homeobox 2
hg19_v2_chr12_-_14967095_14967123	0.0132512	HOXA9	ENST00000316048.2|SMCO3|ENSG00000179256.2|single-pass membrane protein with coiled-coil domains 3
hg19_v2_chr4_-_76944621_76944671	0.0126618	HOXA9	ENST00000306602.1|CXCL10|ENSG00000169245.4|chemokine (C-X-C motif) ligand 10
hg19_v2_chr3_-_47622282_47622282	0.0125624	HOXA9	ENST00000383738.2|CSPG5|ENSG00000114646.5|chondroitin sulfate proteoglycan 5 (neuroglycan C) 	ENST00000264723.4|CSPG5|ENSG00000114646.5|chondroitin sulfate proteoglycan 5 (neuroglycan C)
hg19_v2_chr13_+_27825446_27825506	0.0125225	HOXA9	ENST00000311549.6|RPL21|ENSG00000122026.6|ribosomal protein L21
hg19_v2_chr8_-_20040601_20040630	0.0125058	HOXA9	ENST00000265808.7|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1 	ENST00000522513.1|SLC18A1|ENSG00000036565.10|solute carrier family 18 (vesicular monoamine transporter), member 1
hg19_v2_chr6_+_125304502_125304517	0.0121068	HOXA9	ENST00000519799.1|RNF217|ENSG00000146373.12|ring finger protein 217 	ENST00000368414.2|RNF217|ENSG00000146373.12|ring finger protein 217 	ENST00000359704.2|RNF217|ENSG00000146373.12|ring finger protein 217
hg19_v2_chr2_+_64069459_64069579	0.0120927	HOXA9	ENST00000445915.2|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2 	ENST00000475462.1|UGP2|ENSG00000169764.10|UDP-glucose pyrophosphorylase 2
hg19_v2_chr4_-_177190364_177190379	0.0120575	HOXA9	ENST00000296525.3|ASB5|ENSG00000164122.4|ankyrin repeat and SOCS box containing 5
hg19_v2_chr5_-_131347583_131347870	0.0117558	HOXA9	ENST00000379255.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000430403.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000544770.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000379246.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000414078.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6 	ENST00000441995.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6
hg19_v2_chr5_-_131347501_131347522	0.0117218	HOXA9	ENST00000543479.1|ACSL6|ENSG00000164398.8|acyl-CoA synthetase long-chain family member 6
hg19_v2_chr10_-_28270795_28270809	0.01162	HOXA9	ENST00000545014.1|ARMC4|ENSG00000169126.11|armadillo repeat containing 4
hg19_v2_chr17_-_66951474_66951550	0.0116008	HOXA9	ENST00000269080.2|ABCA8|ENSG00000141338.9|ATP-binding cassette, sub-family A (ABC1), member 8
hg19_v2_chrX_+_65382381_65382392	0.0114453	HOXA9	ENST00000519389.1|HEPH|ENSG00000089472.12|hephaestin
hg19_v2_chr8_-_67874805_67874831	0.0112321	HOXA9	ENST00000563496.1|TCF24|ENSG00000261787.1|transcription factor 24
hg19_v2_chr7_-_150329421_150329482	0.0104998	HOXA9	ENST00000493969.1|GIMAP6|ENSG00000133561.11|GTPase, IMAP family member 6 	ENST00000328902.5|GIMAP6|ENSG00000133561.11|GTPase, IMAP family member 6
hg19_v2_chrX_-_77150985_77151090	0.0101175	HOXA9	ENST00000358075.6|MAGT1|ENSG00000102158.15|magnesium transporter 1
hg19_v2_chr5_+_42756903_42756963	0.00976505	HOXA9	ENST00000361970.5|CCDC152|ENSG00000198865.5|coiled-coil domain containing 152 	ENST00000388827.4|CCDC152|ENSG00000198865.5|coiled-coil domain containing 152
hg19_v2_chr10_-_128210005_128210014	0.00952188	HOXA9	ENST00000284694.7|C10orf90|ENSG00000154493.13|chromosome 10 open reading frame 90 	ENST00000454341.1|C10orf90|ENSG00000154493.13|chromosome 10 open reading frame 90 	ENST00000432642.1|C10orf90|ENSG00000154493.13|chromosome 10 open reading frame 90 	ENST00000392694.1|C10orf90|ENSG00000154493.13|chromosome 10 open reading frame 90
hg19_v2_chr7_-_99277610_99277626	0.00861466	HOXA9	ENST00000343703.5|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5 	ENST00000222982.4|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5 	ENST00000439761.1|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5 	ENST00000339843.2|CYP3A5|ENSG00000106258.9|cytochrome P450, family 3, subfamily A, polypeptide 5
hg19_v2_chr20_+_32250079_32250090	0.00858695	HOXA9	ENST00000375222.3|C20orf144|ENSG00000149609.5|chromosome 20 open reading frame 144
hg19_v2_chr9_+_44867571_44867571	0.00857318	HOXA9	ENST00000377548.2|RP11-160N1.10|ENSG00000204814.5|RP11-160N1.10
hg19_v2_chr5_+_111755280_111755280	0.0085155	HOXA9	ENST00000600409.1|EPB41L4A-AS2|ENSG00000268358.1|EPB41L4A antisense RNA 2 (head to head)
hg19_v2_chr10_-_101190202_101190429	0.00768681	HOXA9	ENST00000543866.1|GOT1|ENSG00000120053.9|glutamic-oxaloacetic transaminase 1, soluble 	ENST00000370508.5|GOT1|ENSG00000120053.9|glutamic-oxaloacetic transaminase 1, soluble
hg19_v2_chr17_+_73663470_73663506	0.00692812	HOXA9	ENST00000583536.1|SAP30BP|ENSG00000161526.10|SAP30 binding protein
hg19_v2_chr6_+_111195973_111195994	0.00613759	HOXA9	ENST00000368885.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368882.3|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000451850.2|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1 	ENST00000368877.5|AMD1|ENSG00000123505.10|adenosylmethionine decarboxylase 1
hg19_v2_chr21_-_35014027_35014066	0.00571556	HOXA9	ENST00000399442.1|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000413017.2|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000445393.1|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000417979.1|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000426935.1|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000381540.3|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000361534.2|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1 	ENST00000381554.3|CRYZL1|ENSG00000205758.7|crystallin, zeta (quinone reductase)-like 1
hg19_v2_chr15_+_32774822_32774822	0.00544569	HOXA9	ENST00000593303.1|AC135983.2|ENSG00000268759.1|Protein LOC100996413
hg19_v2_chr10_+_64893039_64893128	0.00538962	HOXA9	ENST00000277746.6|NRBF2|ENSG00000148572.10|nuclear receptor binding factor 2 	ENST00000435510.2|NRBF2|ENSG00000148572.10|nuclear receptor binding factor 2
hg19_v2_chr4_+_3076388_3076431	0.0049451	HOXA9	ENST00000355072.5|HTT|ENSG00000197386.6|huntingtin
hg19_v2_chr22_-_18111499_18111584	0.00491792	HOXA9	ENST00000413576.1|ATP6V1E1|ENSG00000131100.8|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 	ENST00000399796.2|ATP6V1E1|ENSG00000131100.8|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 	ENST00000399798.2|ATP6V1E1|ENSG00000131100.8|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1 	ENST00000253413.5|ATP6V1E1|ENSG00000131100.8|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1
hg19_v2_chr19_+_4769117_4769293	0.00476595	HOXA9	ENST00000540211.1|MIR7-3HG|ENSG00000176840.7|MIR7-3 host gene (non-protein coding) 	ENST00000317292.3|MIR7-3HG|ENSG00000176840.7|MIR7-3 host gene (non-protein coding) 	ENST00000586721.1|MIR7-3HG|ENSG00000176840.7|MIR7-3 host gene (non-protein coding) 	ENST00000592709.1|MIR7-3HG|ENSG00000176840.7|MIR7-3 host gene (non-protein coding) 	ENST00000588711.1|MIR7-3HG|ENSG00000176840.7|MIR7-3 host gene (non-protein coding) 	ENST00000589639.1|MIR7-3HG|ENSG00000176840.7|MIR7-3 host gene (non-protein coding) 	ENST00000591008.1|MIR7-3HG|ENSG00000176840.7|MIR7-3 host gene (non-protein coding) 	ENST00000592663.1|MIR7-3HG|ENSG00000176840.7|MIR7-3 host gene (non-protein coding) 	ENST00000588758.1|MIR7-3HG|ENSG00000176840.7|MIR7-3 host gene (non-protein coding)
hg19_v2_chr17_+_41150290_41150470	0.00459647	HOXA9	ENST00000589037.1|RPL27|ENSG00000131469.8|ribosomal protein L27 	ENST00000253788.5|RPL27|ENSG00000131469.8|ribosomal protein L27
hg19_v2_chr2_+_138722028_138722057	0.00454244	HOXA9	ENST00000280096.5|HNMT|ENSG00000150540.9|histamine N-methyltransferase
hg19_v2_chr13_-_46425865_46425902	0.00445405	HOXA9	ENST00000400405.2|SIAH3|ENSG00000215475.3|siah E3 ubiquitin protein ligase family member 3
hg19_v2_chr12_+_2921788_2921872	0.00433564	HOXA9	ENST00000228799.2|ITFG2|ENSG00000111203.7|integrin alpha FG-GAP repeat containing 2 	ENST00000419778.2|ITFG2|ENSG00000111203.7|integrin alpha FG-GAP repeat containing 2 	ENST00000542548.1|ITFG2|ENSG00000111203.7|integrin alpha FG-GAP repeat containing 2
hg19_v2_chr15_+_27216297_27216429	0.00429273	HOXA9	ENST00000333743.6|GABRG3|ENSG00000182256.8|gamma-aminobutyric acid (GABA) A receptor, gamma 3
hg19_v2_chr17_-_48450534_48450575	0.00415015	HOXA9	ENST00000503633.1|MRPL27|ENSG00000108826.11|mitochondrial ribosomal protein L27 	ENST00000442592.3|MRPL27|ENSG00000108826.11|mitochondrial ribosomal protein L27 	ENST00000225969.4|MRPL27|ENSG00000108826.11|mitochondrial ribosomal protein L27
hg19_v2_chr10_+_74870253_74870288	0.00411516	HOXA9	ENST00000544879.1|NUDT13|ENSG00000166321.9|nudix (nucleoside diphosphate linked moiety X)-type motif 13 	ENST00000537969.1|NUDT13|ENSG00000166321.9|nudix (nucleoside diphosphate linked moiety X)-type motif 13 	ENST00000372997.3|NUDT13|ENSG00000166321.9|nudix (nucleoside diphosphate linked moiety X)-type motif 13
hg19_v2_chr7_-_122840015_122840040	0.00336014	HOXA9	ENST00000194130.2|SLC13A1|ENSG00000081800.4|solute carrier family 13 (sodium/sulfate symporter), member 1
hg19_v2_chr6_-_55443958_55443974	0.00324634	HOXA9	ENST00000370850.2|HMGCLL1|ENSG00000146151.8|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1
hg19_v2_chr4_-_71532339_71532377	0.00323861	HOXA9	ENST00000254801.4|IGJ|ENSG00000132465.6|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides
hg19_v2_chr4_+_39046615_39046680	0.00316359	HOXA9	ENST00000261425.3|KLHL5|ENSG00000109790.12|kelch-like family member 5 	ENST00000508137.2|KLHL5|ENSG00000109790.12|kelch-like family member 5
hg19_v2_chr19_+_42388437_42388524	0.00314152	HOXA9	ENST00000378152.4|ARHGEF1|ENSG00000076928.13|Rho guanine nucleotide exchange factor (GEF) 1 	ENST00000337665.4|ARHGEF1|ENSG00000076928.13|Rho guanine nucleotide exchange factor (GEF) 1
hg19_v2_chr11_-_57092381_57092433	0.00281826	HOXA9	ENST00000358252.3|TNKS1BP1|ENSG00000149115.9|tankyrase 1 binding protein 1, 182kDa
hg19_v2_chr18_+_72265084_72265143	0.00211745	HOXA9	ENST00000582337.1|ZNF407|ENSG00000215421.5|zinc finger protein 407
hg19_v2_chr11_-_104893863_104893907	0.00206871	HOXA9	ENST00000260315.3|CASP5|ENSG00000137757.6|caspase 5, apoptosis-related cysteine peptidase 	ENST00000526056.1|CASP5|ENSG00000137757.6|caspase 5, apoptosis-related cysteine peptidase 	ENST00000531367.1|CASP5|ENSG00000137757.6|caspase 5, apoptosis-related cysteine peptidase 	ENST00000456094.1|CASP5|ENSG00000137757.6|caspase 5, apoptosis-related cysteine peptidase 	ENST00000444749.2|CASP5|ENSG00000137757.6|caspase 5, apoptosis-related cysteine peptidase 	ENST00000393141.2|CASP5|ENSG00000137757.6|caspase 5, apoptosis-related cysteine peptidase 	ENST00000418434.1|CASP5|ENSG00000137757.6|caspase 5, apoptosis-related cysteine peptidase 	ENST00000393139.2|CASP5|ENSG00000137757.6|caspase 5, apoptosis-related cysteine peptidase
hg19_v2_chr17_+_41150479_41150500	0.00165981	HOXA9	ENST00000589913.1|RPL27|ENSG00000131469.8|ribosomal protein L27
hg19_v2_chr2_+_38177575_38177612	0.00152347	HOXA9	ENST00000407257.1|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000417700.2|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000234195.3|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2 	ENST00000442857.1|RMDN2|ENSG00000115841.15|regulator of microtubule dynamics 2
hg19_v2_chr19_-_45926739_45926863	0.00145434	HOXA9	ENST00000589381.1|ERCC1|ENSG00000012061.11|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) 	ENST00000591636.1|ERCC1|ENSG00000012061.11|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) 	ENST00000013807.5|ERCC1|ENSG00000012061.11|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) 	ENST00000592023.1|ERCC1|ENSG00000012061.11|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)
hg19_v2_chr7_+_128312346_128312371	0.000842958	HOXA9	ENST00000480462.1|FAM71F2|ENSG00000205085.4|family with sequence similarity 71, member F2 	ENST00000378704.3|FAM71F2|ENSG00000205085.4|family with sequence similarity 71, member F2 	ENST00000477515.1|FAM71F2|ENSG00000205085.4|family with sequence similarity 71, member F2
hg19_v2_chr5_+_140800638_140800795	0.000640642	HOXA9	ENST00000398587.2|PCDHGA11|ENSG00000253873.1|protocadherin gamma subfamily A, 11 	ENST00000518882.1|PCDHGA11|ENSG00000253873.1|protocadherin gamma subfamily A, 11
hg19_v2_chr1_-_235292250_235292261	0.000591816	HOXA9	ENST00000366607.4|TOMM20|ENSG00000173726.6|translocase of outer mitochondrial membrane 20 homolog (yeast)
hg19_v2_chr11_-_14521379_14521573	0.000400848	HOXA9	ENST00000249923.3|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1 	ENST00000529866.1|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1 	ENST00000439561.2|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1 	ENST00000534771.1|COPB1|ENSG00000129083.8|coatomer protein complex, subunit beta 1
hg19_v2_chr18_-_70532906_70532934	0.000350761	HOXA9	ENST00000299430.2|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1 	ENST00000397929.1|NETO1|ENSG00000166342.14|neuropilin (NRP) and tolloid (TLL)-like 1
hg19_v2_chr14_-_74959994_74960020	0.000172115	HOXA9	ENST00000238633.2|NPC2|ENSG00000119655.4|Niemann-Pick disease, type C2 	ENST00000434013.2|NPC2|ENSG00000119655.4|Niemann-Pick disease, type C2
hg19_v2_chrX_-_63615297_63615347	6.55482e-05	HOXA9	ENST00000374852.3|MTMR8|ENSG00000102043.11|myotubularin related protein 8 	ENST00000453546.1|MTMR8|ENSG00000102043.11|myotubularin related protein 8
