hg19_v2_chr22_-_30866564_30866572	1.38921	HOXA1	ENST00000435069.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000415957.2|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae) 	ENST00000540910.1|SEC14L3|ENSG00000100012.7|SEC14-like 3 (S. cerevisiae)
hg19_v2_chr8_+_104152922_104152992	0.928793	HOXA1	ENST00000309982.5|BAALC|ENSG00000164929.12|brain and acute leukemia, cytoplasmic 	ENST00000438105.2|BAALC|ENSG00000164929.12|brain and acute leukemia, cytoplasmic 	ENST00000297574.6|BAALC|ENSG00000164929.12|brain and acute leukemia, cytoplasmic
hg19_v2_chr15_-_93616340_93616395	0.824101	HOXA1	ENST00000557420.1|RGMA|ENSG00000182175.9|repulsive guidance molecule family member a 	ENST00000542321.2|RGMA|ENSG00000182175.9|repulsive guidance molecule family member a
hg19_v2_chr20_+_31669333_31669333	0.819595	HOXA1	ENST00000375483.3|BPIFB4|ENSG00000186191.7|BPI fold containing family B, member 4
hg19_v2_chr2_-_154335300_154335322	0.809669	HOXA1	ENST00000325926.3|RPRM|ENSG00000177519.3|reprimo, TP53 dependent G2 arrest mediator candidate
hg19_v2_chr10_-_28270795_28270809	0.761083	HOXA1	ENST00000545014.1|ARMC4|ENSG00000169126.11|armadillo repeat containing 4
hg19_v2_chr8_-_27115931_27115942	0.729538	HOXA1	ENST00000523048.1|STMN4|ENSG00000015592.12|stathmin-like 4
hg19_v2_chr1_+_85527987_85528016	0.67344	HOXA1	ENST00000326813.8|WDR63|ENSG00000162643.8|WD repeat domain 63 	ENST00000294664.6|WDR63|ENSG00000162643.8|WD repeat domain 63 	ENST00000528899.1|WDR63|ENSG00000162643.8|WD repeat domain 63
hg19_v2_chr12_-_71533055_71533101	0.658858	HOXA1	ENST00000552128.1|TSPAN8|ENSG00000127324.4|tetraspanin 8
hg19_v2_chr3_-_112564797_112564797	0.576145	HOXA1	ENST00000398214.1|CD200R1L|ENSG00000206531.6|CD200 receptor 1-like 	ENST00000448932.1|CD200R1L|ENSG00000206531.6|CD200 receptor 1-like
hg19_v2_chr17_+_68071389_68071426	0.569885	HOXA1	ENST00000283936.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16 	ENST00000392671.1|KCNJ16|ENSG00000153822.9|potassium inwardly-rectifying channel, subfamily J, member 16
hg19_v2_chr17_+_26800296_26800314	0.556348	HOXA1	ENST00000444914.3|SLC13A2|ENSG00000007216.10|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 	ENST00000314669.5|SLC13A2|ENSG00000007216.10|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2
hg19_v2_chr14_+_96949319_96949444	0.554969	HOXA1	ENST00000554706.1|AK7|ENSG00000140057.4|adenylate kinase 7
hg19_v2_chr13_+_36050881_36050887	0.554265	HOXA1	ENST00000537702.1|NBEA|ENSG00000172915.14|neurobeachin
hg19_v2_chr22_+_25615489_25615544	0.546104	HOXA1	ENST00000398215.2|CRYBB2|ENSG00000244752.2|crystallin, beta B2
hg19_v2_chr8_-_27468842_27468878	0.5241	HOXA1	ENST00000523500.1|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr8_-_27468945_27468948	0.511128	HOXA1	ENST00000405140.3|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr2_+_8822113_8822196	0.483503	HOXA1	ENST00000396290.1|ID2|ENSG00000115738.5|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein 	ENST00000331129.3|ID2|ENSG00000115738.5|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
hg19_v2_chr8_+_1993173_1993199	0.477596	HOXA1	ENST00000523438.1|MYOM2|ENSG00000036448.5|myomesin 2
hg19_v2_chr15_-_43513187_43513251	0.463948	HOXA1	ENST00000540029.1|EPB42|ENSG00000166947.7|erythrocyte membrane protein band 4.2 	ENST00000441366.2|EPB42|ENSG00000166947.7|erythrocyte membrane protein band 4.2
hg19_v2_chr15_-_93616892_93616939	0.452308	HOXA1	ENST00000556658.1|RGMA|ENSG00000182175.9|repulsive guidance molecule family member a 	ENST00000538818.1|RGMA|ENSG00000182175.9|repulsive guidance molecule family member a 	ENST00000425933.2|RGMA|ENSG00000182175.9|repulsive guidance molecule family member a
hg19_v2_chr1_+_3614591_3614622	0.446604	HOXA1	ENST00000378290.4|TP73|ENSG00000078900.10|tumor protein p73
hg19_v2_chr8_+_1993152_1993168	0.432888	HOXA1	ENST00000262113.4|MYOM2|ENSG00000036448.5|myomesin 2
hg19_v2_chr9_-_89562104_89562104	0.423382	HOXA1	ENST00000298743.7|GAS1|ENSG00000180447.5|growth arrest-specific 1
hg19_v2_chr8_-_27469196_27469294	0.387072	HOXA1	ENST00000546343.1|CLU|ENSG00000120885.15|clusterin 	ENST00000560566.1|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr8_-_27462822_27462856	0.385398	HOXA1	ENST00000522098.1|CLU|ENSG00000120885.15|clusterin
hg19_v2_chr16_+_31213206_31213206	0.362552	HOXA1	ENST00000561916.2|C16orf98|ENSG00000261359.2|chromosome 16 open reading frame 98
hg19_v2_chr16_+_28303804_28303864	0.354823	HOXA1	ENST00000341901.4|SBK1|ENSG00000188322.4|SH3 domain binding kinase 1
hg19_v2_chr2_-_79313973_79314059	0.351391	HOXA1	ENST00000454188.1|REG1B|ENSG00000172023.3|regenerating islet-derived 1 beta
hg19_v2_chr9_-_112970436_112970469	0.348337	HOXA1	ENST00000400613.4|C9orf152|ENSG00000188959.9|chromosome 9 open reading frame 152
hg19_v2_chr11_-_5248294_5248308	0.34763	HOXA1	ENST00000335295.4|HBB|ENSG00000244734.2|hemoglobin, beta
hg19_v2_chr4_-_38806404_38806537	0.330229	HOXA1	ENST00000308979.2|TLR1|ENSG00000174125.3|toll-like receptor 1 	ENST00000505940.1|TLR1|ENSG00000174125.3|toll-like receptor 1 	ENST00000515861.1|TLR1|ENSG00000174125.3|toll-like receptor 1
hg19_v2_chr12_-_55378452_55378458	0.32891	HOXA1	ENST00000449076.1|TESPA1|ENSG00000135426.10|thymocyte expressed, positive selection associated 1
hg19_v2_chr1_-_92351769_92351787	0.325237	HOXA1	ENST00000212355.4|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr6_-_31651817_31651817	0.32218	HOXA1	ENST00000375863.3|LY6G5C|ENSG00000204428.8|lymphocyte antigen 6 complex, locus G5C 	ENST00000375860.2|LY6G5C|ENSG00000204428.8|lymphocyte antigen 6 complex, locus G5C
hg19_v2_chr1_-_182641367_182641386	0.314234	HOXA1	ENST00000508450.1|RGS8|ENSG00000135824.8|regulator of G-protein signaling 8
hg19_v2_chr5_-_693500_693511	0.301928	HOXA1	ENST00000360578.5|TPPP|ENSG00000171368.10|tubulin polymerization promoting protein
hg19_v2_chr9_-_5304432_5304719	0.294499	HOXA1	ENST00000416837.1|RLN2|ENSG00000107014.7|relaxin 2 	ENST00000308420.3|RLN2|ENSG00000107014.7|relaxin 2
hg19_v2_chr17_+_72270429_72270456	0.293487	HOXA1	ENST00000311014.6|DNAI2|ENSG00000171595.9|dynein, axonemal, intermediate chain 2
hg19_v2_chr13_-_24895566_24895566	0.278859	HOXA1	ENST00000422229.2|AL359736.1|ENSG00000205850.6|protein PCOTH isoform 1
hg19_v2_chr7_-_120497178_120497407	0.26917	HOXA1	ENST00000441017.1|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000424710.1|TSPAN12|ENSG00000106025.4|tetraspanin 12 	ENST00000433758.1|TSPAN12|ENSG00000106025.4|tetraspanin 12
hg19_v2_chr6_-_52705641_52705641	0.268801	HOXA1	ENST00000370989.2|GSTA5|ENSG00000182793.6|glutathione S-transferase alpha 5
hg19_v2_chr22_-_39190116_39190203	0.267885	HOXA1	ENST00000406622.1|SUN2|ENSG00000100242.11|Sad1 and UNC84 domain containing 2 	ENST00000216068.4|DNAL4|ENSG00000100246.8|dynein, axonemal, light chain 4 	ENST00000406199.3|DNAL4|ENSG00000100246.8|dynein, axonemal, light chain 4
hg19_v2_chr11_-_40315640_40315684	0.262953	HOXA1	ENST00000278198.2|LRRC4C|ENSG00000148948.3|leucine rich repeat containing 4C
hg19_v2_chrX_+_128913906_128913960	0.262065	HOXA1	ENST00000356892.3|SASH3|ENSG00000122122.9|SAM and SH3 domain containing 3
hg19_v2_chr5_+_133861790_133861829	0.252583	HOXA1	ENST00000395003.1|PHF15|ENSG00000043143.16|jade family PHD finger 2
hg19_v2_chr5_-_20575959_20575997	0.250471	HOXA1	ENST00000507958.1|CDH18|ENSG00000145526.7|cadherin 18, type 2
hg19_v2_chr3_+_98072698_98072698	0.250117	HOXA1	ENST00000354924.2|OR5K4|ENSG00000196098.2|olfactory receptor, family 5, subfamily K, member 4
hg19_v2_chr14_+_24779376_24779394	0.245475	HOXA1	ENST00000530080.1|LTB4R2|ENSG00000213906.5|leukotriene B4 receptor 2
hg19_v2_chr1_-_13673511_13673511	0.242521	HOXA1	ENST00000344998.3|PRAMEF14|ENSG00000204481.6|PRAME family member 14 	ENST00000334600.6|PRAMEF14|ENSG00000204481.6|PRAME family member 14
hg19_v2_chr7_+_139528952_139529038	0.24101	HOXA1	ENST00000416849.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000436047.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000414508.2|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000448866.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet)
hg19_v2_chr9_+_2717502_2717524	0.24089	HOXA1	ENST00000382082.3|KCNV2|ENSG00000168263.8|potassium channel, subfamily V, member 2
hg19_v2_chr7_-_101212244_101212286	0.239249	HOXA1	ENST00000451953.1|LINC01007|ENSG00000233123.1|long intergenic non-protein coding RNA 1007 	ENST00000434537.1|LINC01007|ENSG00000233123.1|long intergenic non-protein coding RNA 1007 	ENST00000437900.1|LINC01007|ENSG00000233123.1|long intergenic non-protein coding RNA 1007
hg19_v2_chr2_-_49381646_49381676	0.239241	HOXA1	ENST00000346173.3|FSHR|ENSG00000170820.7|follicle stimulating hormone receptor 	ENST00000406846.2|FSHR|ENSG00000170820.7|follicle stimulating hormone receptor
hg19_v2_chr7_-_137028498_137028520	0.238556	HOXA1	ENST00000393083.2|PTN|ENSG00000105894.7|pleiotrophin
hg19_v2_chr2_-_49381572_49381639	0.22898	HOXA1	ENST00000454032.1|FSHR|ENSG00000170820.7|follicle stimulating hormone receptor 	ENST00000304421.4|FSHR|ENSG00000170820.7|follicle stimulating hormone receptor
hg19_v2_chr2_-_239148599_239148765	0.227319	HOXA1	ENST00000409182.1|HES6|ENSG00000144485.6|hes family bHLH transcription factor 6 	ENST00000409002.3|HES6|ENSG00000144485.6|hes family bHLH transcription factor 6 	ENST00000450098.1|HES6|ENSG00000144485.6|hes family bHLH transcription factor 6 	ENST00000409356.1|HES6|ENSG00000144485.6|hes family bHLH transcription factor 6 	ENST00000409160.3|HES6|ENSG00000144485.6|hes family bHLH transcription factor 6 	ENST00000409574.1|HES6|ENSG00000144485.6|hes family bHLH transcription factor 6 	ENST00000272937.5|HES6|ENSG00000144485.6|hes family bHLH transcription factor 6
hg19_v2_chr13_-_36050819_36050834	0.220131	HOXA1	ENST00000379919.4|MAB21L1|ENSG00000180660.6|mab-21-like 1 (C. elegans)
hg19_v2_chr5_-_42825983_42826007	0.219651	HOXA1	ENST00000506577.1|SEPP1|ENSG00000250722.1|selenoprotein P, plasma, 1
hg19_v2_chr12_+_8276495_8276523	0.219568	HOXA1	ENST00000546339.1|CLEC4A|ENSG00000111729.8|C-type lectin domain family 4, member A
hg19_v2_chr7_-_137028534_137028611	0.219159	HOXA1	ENST00000348225.2|PTN|ENSG00000105894.7|pleiotrophin
hg19_v2_chr16_+_71660052_71660071	0.217237	HOXA1	ENST00000567566.1|MARVELD3|ENSG00000140832.5|MARVEL domain containing 3
hg19_v2_chr6_+_140175987_140176056	0.212877	HOXA1	ENST00000414038.1|RP5-899B16.1|ENSG00000231426.1|RP5-899B16.1	ENST00000431609.1|RP5-899B16.1|ENSG00000231426.1|RP5-899B16.1
hg19_v2_chr7_+_139529040_139529073	0.209596	HOXA1	ENST00000455353.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000458722.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet) 	ENST00000411653.1|TBXAS1|ENSG00000059377.11|thromboxane A synthase 1 (platelet)
hg19_v2_chr15_+_81591757_81591780	0.209551	HOXA1	ENST00000558332.1|IL16|ENSG00000172349.12|interleukin 16
hg19_v2_chr16_+_25228242_25228273	0.20539	HOXA1	ENST00000219660.5|AQP8|ENSG00000103375.6|aquaporin 8
hg19_v2_chr8_-_40755333_40755352	0.204142	HOXA1	ENST00000297737.6|ZMAT4|ENSG00000165061.10|zinc finger, matrin-type 4 	ENST00000315769.7|ZMAT4|ENSG00000165061.10|zinc finger, matrin-type 4
hg19_v2_chr11_+_2482661_2482675	0.203566	HOXA1	ENST00000335475.5|KCNQ1|ENSG00000053918.11|potassium voltage-gated channel, KQT-like subfamily, member 1
hg19_v2_chr3_-_150920979_150921009	0.202017	HOXA1	ENST00000309180.5|GPR171|ENSG00000174946.5|G protein-coupled receptor 171 	ENST00000480322.1|GPR171|ENSG00000174946.5|G protein-coupled receptor 171
hg19_v2_chr20_-_3154162_3154232	0.199945	HOXA1	ENST00000360342.3|LZTS3|ENSG00000088899.10|Homo sapiens leucine zipper, putative tumor suppressor family member 3 (LZTS3), mRNA.
hg19_v2_chrX_-_10645773_10645795	0.1932	HOXA1	ENST00000453318.2|MID1|ENSG00000101871.10|midline 1 (Opitz/BBB syndrome)
hg19_v2_chr13_-_20077417_20077419	0.190221	HOXA1	ENST00000382978.1|TPTE2|ENSG00000132958.13|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 	ENST00000400230.2|TPTE2|ENSG00000132958.13|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 	ENST00000255310.6|TPTE2|ENSG00000132958.13|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2
hg19_v2_chr17_-_38821373_38821440	0.188267	HOXA1	ENST00000394052.3|KRT222|ENSG00000213424.4|keratin 222
hg19_v2_chr1_-_13452656_13452656	0.186598	HOXA1	ENST00000376132.3|PRAMEF13|ENSG00000204495.3|PRAME family member 13
hg19_v2_chr20_+_52105495_52105495	0.181587	HOXA1	ENST00000439873.2|AL354993.1|ENSG00000227164.2|Cell growth-inhibiting protein 7; HCG1784586; Uncharacterized protein
hg19_v2_chr2_+_1488435_1488560	0.177638	HOXA1	ENST00000446278.1|TPO|ENSG00000115705.16|thyroid peroxidase 	ENST00000469607.1|TPO|ENSG00000115705.16|thyroid peroxidase
hg19_v2_chr19_+_58193388_58193413	0.176363	HOXA1	ENST00000596085.1|ZNF551|ENSG00000204519.6|zinc finger protein 551 	ENST00000594684.1|AC003006.7|ENSG00000269026.2|Uncharacterized protein
hg19_v2_chr2_-_197226875_197226946	0.176054	HOXA1	ENST00000409111.1|HECW2|ENSG00000138411.6|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
hg19_v2_chr10_-_134756030_134756103	0.169408	HOXA1	ENST00000368586.5|TTC40|ENSG00000171811.8|tetratricopeptide repeat domain 40 	ENST00000368582.2|TTC40|ENSG00000171811.8|tetratricopeptide repeat domain 40
hg19_v2_chr14_+_21498666_21498756	0.163277	HOXA1	ENST00000481535.1|TPPP2|ENSG00000179636.10|tubulin polymerization-promoting protein family member 2
hg19_v2_chr11_-_40314652_40314680	0.163201	HOXA1	ENST00000527150.1|LRRC4C|ENSG00000148948.3|leucine rich repeat containing 4C
hg19_v2_chr11_+_61717336_61717356	0.162198	HOXA1	ENST00000378042.3|BEST1|ENSG00000167995.11|bestrophin 1
hg19_v2_chr11_-_126870655_126870673	0.16083	HOXA1	ENST00000525144.2|KIRREL3|ENSG00000149571.6|kin of IRRE like 3 (Drosophila)
hg19_v2_chr11_-_104034827_104034850	0.160543	HOXA1	ENST00000393158.2|PDGFD|ENSG00000170962.8|platelet derived growth factor D
hg19_v2_chr4_-_123542224_123542224	0.158837	HOXA1	ENST00000264497.3|IL21|ENSG00000138684.3|interleukin 21
hg19_v2_chrX_-_52258669_52258669	0.158122	HOXA1	ENST00000441417.1|XAGE1A|ENSG00000204379.6|X antigen family, member 1A
hg19_v2_chr17_-_8027402_8027432	0.15568	HOXA1	ENST00000541682.2|HES7|ENSG00000179111.4|hes family bHLH transcription factor 7 	ENST00000317814.4|HES7|ENSG00000179111.4|hes family bHLH transcription factor 7 	ENST00000577735.1|HES7|ENSG00000179111.4|hes family bHLH transcription factor 7
hg19_v2_chr14_-_81408063_81408088	0.155197	HOXA1	ENST00000557411.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa
hg19_v2_chr17_+_40932610_40932696	0.153162	HOXA1	ENST00000246914.5|WNK4|ENSG00000126562.12|WNK lysine deficient protein kinase 4
hg19_v2_chr11_+_61717279_61717300	0.15301	HOXA1	ENST00000378043.4|BEST1|ENSG00000167995.11|bestrophin 1
hg19_v2_chr22_-_19419205_19419280	0.15227	HOXA1	ENST00000340170.4|HIRA|ENSG00000100084.10|histone cell cycle regulator 	ENST00000263208.5|HIRA|ENSG00000100084.10|histone cell cycle regulator
hg19_v2_chr7_+_23637763_23637780	0.150491	HOXA1	ENST00000410069.1|CCDC126|ENSG00000169193.7|coiled-coil domain containing 126
hg19_v2_chr1_+_367640_367640	0.150133	HOXA1	ENST00000426406.1|OR4F29|ENSG00000235249.1|olfactory receptor, family 4, subfamily F, member 29
hg19_v2_chr10_+_7745232_7745295	0.14948	HOXA1	ENST00000358415.4|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v2_chr11_-_104035088_104035119	0.148713	HOXA1	ENST00000302251.5|PDGFD|ENSG00000170962.8|platelet derived growth factor D
hg19_v2_chr6_+_25754927_25754980	0.148313	HOXA1	ENST00000377905.4|SLC17A4|ENSG00000146039.6|solute carrier family 17, member 4 	ENST00000439485.2|SLC17A4|ENSG00000146039.6|solute carrier family 17, member 4
hg19_v2_chr17_+_43239231_43239297	0.146206	HOXA1	ENST00000591576.1|HEXIM2|ENSG00000168517.6|hexamethylene bis-acetamide inducible 2 	ENST00000591070.1|HEXIM2|ENSG00000168517.6|hexamethylene bis-acetamide inducible 2 	ENST00000592695.1|HEXIM2|ENSG00000168517.6|hexamethylene bis-acetamide inducible 2
hg19_v2_chr13_-_38172863_38172981	0.143636	HOXA1	ENST00000541481.1|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379743.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379742.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379749.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000541179.1|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor 	ENST00000379747.4|POSTN|ENSG00000133110.10|periostin, osteoblast specific factor
hg19_v2_chr5_-_133702761_133702793	0.142843	HOXA1	ENST00000521118.1|CDKL3|ENSG00000006837.7|cyclin-dependent kinase-like 3 	ENST00000265334.4|CDKL3|ENSG00000006837.7|cyclin-dependent kinase-like 3 	ENST00000435211.1|CDKL3|ENSG00000006837.7|cyclin-dependent kinase-like 3
hg19_v2_chrX_-_25034065_25034088	0.140086	HOXA1	ENST00000379044.4|ARX|ENSG00000004848.6|aristaless related homeobox
hg19_v2_chr2_+_149632783_149632820	0.138373	HOXA1	ENST00000435030.1|KIF5C|ENSG00000168280.12|kinesin family member 5C
hg19_v2_chr11_+_34460447_34460561	0.13524	HOXA1	ENST00000241052.4|CAT|ENSG00000121691.4|catalase
hg19_v2_chr21_-_32185570_32185592	0.134156	HOXA1	ENST00000329621.4|KRTAP8-1|ENSG00000183640.4|keratin associated protein 8-1
hg19_v2_chr1_-_20306909_20306936	0.133665	HOXA1	ENST00000375111.3|PLA2G2A|ENSG00000188257.6|phospholipase A2, group IIA (platelets, synovial fluid) 	ENST00000400520.3|PLA2G2A|ENSG00000188257.6|phospholipase A2, group IIA (platelets, synovial fluid)
hg19_v2_chr12_+_54402790_54402832	0.133483	HOXA1	ENST00000040584.4|HOXC8|ENSG00000037965.4|homeobox C8
hg19_v2_chr20_+_30458431_30458505	0.133366	HOXA1	ENST00000375938.4|TTLL9|ENSG00000131044.12|tubulin tyrosine ligase-like family, member 9 	ENST00000535842.1|TTLL9|ENSG00000131044.12|tubulin tyrosine ligase-like family, member 9 	ENST00000310998.4|TTLL9|ENSG00000131044.12|tubulin tyrosine ligase-like family, member 9 	ENST00000375921.2|TTLL9|ENSG00000131044.12|tubulin tyrosine ligase-like family, member 9
hg19_v2_chr1_+_236557569_236557578	0.131083	HOXA1	ENST00000334232.4|EDARADD|ENSG00000186197.8|EDAR-associated death domain
hg19_v2_chrX_-_57937067_57937067	0.130934	HOXA1	ENST00000358697.4|ZXDA|ENSG00000198205.5|zinc finger, X-linked, duplicated A
hg19_v2_chr2_+_74685413_74685456	0.130809	HOXA1	ENST00000233615.2|WBP1|ENSG00000239779.2|WW domain binding protein 1
hg19_v2_chr16_+_75256507_75256511	0.129843	HOXA1	ENST00000495583.1|CTRB1|ENSG00000168925.6|chymotrypsinogen B1
hg19_v2_chr20_-_30458432_30458483	0.129674	HOXA1	ENST00000375966.4|DUSP15|ENSG00000149599.11|dual specificity phosphatase 15 	ENST00000278979.3|DUSP15|ENSG00000149599.11|dual specificity phosphatase 15
hg19_v2_chr3_+_14444063_14444133	0.129624	HOXA1	ENST00000454876.2|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6 	ENST00000360861.3|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6 	ENST00000416216.2|SLC6A6|ENSG00000131389.12|solute carrier family 6 (neurotransmitter transporter), member 6
hg19_v2_chr1_-_207095324_207095357	0.129057	HOXA1	ENST00000530505.1|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3 	ENST00000367091.3|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3 	ENST00000442471.2|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3
hg19_v2_chr2_+_74685527_74685599	0.126435	HOXA1	ENST00000393972.3|WBP1|ENSG00000239779.2|WW domain binding protein 1 	ENST00000409737.1|WBP1|ENSG00000239779.2|WW domain binding protein 1 	ENST00000428943.1|WBP1|ENSG00000239779.2|WW domain binding protein 1
hg19_v2_chr7_-_3214287_3214287	0.124826	HOXA1	ENST00000404626.3|AC091801.1|ENSG00000217455.4|LOC392621; Uncharacterized protein
hg19_v2_chr9_-_130679257_130679336	0.12271	HOXA1	ENST00000361444.3|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 	ENST00000335791.5|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 	ENST00000343609.2|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
hg19_v2_chr11_+_66247478_66247503	0.122579	HOXA1	ENST00000531863.1|DPP3|ENSG00000254986.3|dipeptidyl-peptidase 3 	ENST00000532677.1|DPP3|ENSG00000254986.3|dipeptidyl-peptidase 3
hg19_v2_chr12_-_23737534_23737550	0.122459	HOXA1	ENST00000396007.2|SOX5|ENSG00000134532.11|SRY (sex determining region Y)-box 5
hg19_v2_chr4_+_71200681_71200690	0.121442	HOXA1	ENST00000273936.5|CABS1|ENSG00000145309.5|calcium-binding protein, spermatid-specific 1
hg19_v2_chr10_+_7745303_7745363	0.121234	HOXA1	ENST00000429820.1|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2 	ENST00000379587.4|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v2_chr9_+_87285257_87285311	0.120715	HOXA1	ENST00000323115.4|NTRK2|ENSG00000148053.11|neurotrophic tyrosine kinase, receptor, type 2
hg19_v2_chr7_-_2354099_2354115	0.120358	HOXA1	ENST00000222990.3|SNX8|ENSG00000106266.4|sorting nexin 8
hg19_v2_chr17_-_26989136_26989218	0.120167	HOXA1	ENST00000247020.4|SDF2|ENSG00000132581.5|stromal cell-derived factor 2
hg19_v2_chr12_-_129570545_129570545	0.119417	HOXA1	ENST00000389441.4|TMEM132D|ENSG00000151952.10|transmembrane protein 132D
hg19_v2_chr8_-_117043_117043	0.119316	HOXA1	ENST00000320901.3|OR4F21|ENSG00000176269.3|olfactory receptor, family 4, subfamily F, member 21
hg19_v2_chr11_+_61248583_61248600	0.119061	HOXA1	ENST00000432063.2|PPP1R32|ENSG00000162148.6|protein phosphatase 1, regulatory subunit 32 	ENST00000338608.2|PPP1R32|ENSG00000162148.6|protein phosphatase 1, regulatory subunit 32
hg19_v2_chr6_+_31021225_31021277	0.118835	HOXA1	ENST00000565192.1|HCG22|ENSG00000228789.2|HLA complex group 22 	ENST00000562344.1|HCG22|ENSG00000228789.2|HLA complex group 22
hg19_v2_chr15_+_48009541_48009676	0.118154	HOXA1	ENST00000536845.2|SEMA6D|ENSG00000137872.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D 	ENST00000558816.1|SEMA6D|ENSG00000137872.11|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
hg19_v2_chr6_-_15586238_15586256	0.118016	HOXA1	ENST00000462989.2|DTNBP1|ENSG00000047579.15|dystrobrevin binding protein 1
hg19_v2_chr17_-_40264692_40264753	0.117595	HOXA1	ENST00000591220.1|DHX58|ENSG00000108771.8|DEXH (Asp-Glu-X-His) box polypeptide 58 	ENST00000251642.3|DHX58|ENSG00000108771.8|DEXH (Asp-Glu-X-His) box polypeptide 58
hg19_v2_chr6_+_7108210_7108264	0.116938	HOXA1	ENST00000467782.1|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000334984.6|RREB1|ENSG00000124782.15|ras responsive element binding protein 1 	ENST00000349384.6|RREB1|ENSG00000124782.15|ras responsive element binding protein 1
hg19_v2_chr18_-_74207146_74207183	0.116911	HOXA1	ENST00000443185.2|ZNF516|ENSG00000101493.6|zinc finger protein 516
hg19_v2_chr12_+_57998400_57998422	0.116825	HOXA1	ENST00000548804.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000550596.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000551835.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000549583.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila)
hg19_v2_chr16_+_16472912_16472912	0.116725	HOXA1	ENST00000530217.2|NPIPA7|ENSG00000214967.4|nuclear pore complex interacting protein family, member A7
hg19_v2_chr7_-_99332719_99332820	0.115707	HOXA1	ENST00000336374.2|CYP3A7|ENSG00000160870.8|cytochrome P450, family 3, subfamily A, polypeptide 7
hg19_v2_chrX_+_54834791_54834832	0.11503	HOXA1	ENST00000218439.4|MAGED2|ENSG00000102316.12|melanoma antigen family D, 2 	ENST00000375058.1|MAGED2|ENSG00000102316.12|melanoma antigen family D, 2 	ENST00000375060.1|MAGED2|ENSG00000102316.12|melanoma antigen family D, 2
hg19_v2_chr16_-_15472151_15472151	0.112793	HOXA1	ENST00000360151.4|NPIPA5|ENSG00000183793.9|nuclear pore complex interacting protein family, member A5 	ENST00000543801.1|NPIPA5|ENSG00000183793.9|nuclear pore complex interacting protein family, member A5
hg19_v2_chr16_+_14805546_14805546	0.11278	HOXA1	ENST00000552140.1|NPIPA3|ENSG00000224712.6|nuclear pore complex interacting protein family, member A3
hg19_v2_chr4_+_86396265_86396276	0.112508	HOXA1	ENST00000395184.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr12_+_64173583_64173664	0.110551	HOXA1	ENST00000261234.6|TMEM5|ENSG00000118600.7|transmembrane protein 5
hg19_v2_chr14_+_24779340_24779371	0.110528	HOXA1	ENST00000533293.1|LTB4R2|ENSG00000213906.5|leukotriene B4 receptor 2 	ENST00000543919.1|LTB4R2|ENSG00000213906.5|leukotriene B4 receptor 2
hg19_v2_chr12_-_101604185_101604185	0.108549	HOXA1	ENST00000536262.2|SLC5A8|ENSG00000256870.2|solute carrier family 5 (sodium/monocarboxylate cotransporter), member 8
hg19_v2_chr3_-_150264272_150264428	0.107624	HOXA1	ENST00000491660.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000487153.1|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1 	ENST00000239944.2|SERP1|ENSG00000120742.6|stress-associated endoplasmic reticulum protein 1
hg19_v2_chr3_+_127872265_127872344	0.106766	HOXA1	ENST00000254730.6|EEFSEC|ENSG00000132394.6|eukaryotic elongation factor, selenocysteine-tRNA-specific 	ENST00000483457.1|EEFSEC|ENSG00000132394.6|eukaryotic elongation factor, selenocysteine-tRNA-specific
hg19_v2_chr6_-_154677900_154677944	0.106355	HOXA1	ENST00000265198.4|IPCEF1|ENSG00000074706.9|interaction protein for cytohesin exchange factors 1 	ENST00000520261.1|IPCEF1|ENSG00000074706.9|interaction protein for cytohesin exchange factors 1
hg19_v2_chr5_+_133861339_133861432	0.102223	HOXA1	ENST00000282605.4|PHF15|ENSG00000043143.16|jade family PHD finger 2 	ENST00000361895.2|PHF15|ENSG00000043143.16|jade family PHD finger 2 	ENST00000402835.1|PHF15|ENSG00000043143.16|jade family PHD finger 2
hg19_v2_chr19_+_58193337_58193386	0.101652	HOXA1	ENST00000601064.1|ZNF551|ENSG00000204519.6|zinc finger protein 551 	ENST00000282296.5|ZNF551|ENSG00000204519.6|zinc finger protein 551 	ENST00000356715.4|ZNF551|ENSG00000204519.6|zinc finger protein 551
hg19_v2_chr2_+_166326157_166326216	0.100535	HOXA1	ENST00000421875.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000314499.7|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000409664.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3
hg19_v2_chr14_-_23822061_23822072	0.100499	HOXA1	ENST00000397260.3|SLC22A17|ENSG00000092096.10|solute carrier family 22, member 17
hg19_v2_chr6_+_31021973_31021990	0.100129	HOXA1	ENST00000570223.1|HCG22|ENSG00000228789.2|HLA complex group 22 	ENST00000566475.1|HCG22|ENSG00000228789.2|HLA complex group 22 	ENST00000426185.1|HCG22|ENSG00000228789.2|HLA complex group 22
hg19_v2_chr17_+_61554413_61554434	0.0998061	HOXA1	ENST00000538928.1|ACE|ENSG00000159640.10|angiotensin I converting enzyme 	ENST00000290866.4|ACE|ENSG00000159640.10|angiotensin I converting enzyme 	ENST00000428043.1|ACE|ENSG00000159640.10|angiotensin I converting enzyme
hg19_v2_chr1_+_240255166_240255197	0.0990619	HOXA1	ENST00000319653.9|FMN2|ENSG00000155816.15|formin 2
hg19_v2_chr1_-_211666259_211666259	0.0974953	HOXA1	ENST00000367002.4|RD3|ENSG00000198570.5|retinal degeneration 3
hg19_v2_chr11_+_122753391_122753478	0.0967893	HOXA1	ENST00000307257.6|C11orf63|ENSG00000109944.6|chromosome 11 open reading frame 63 	ENST00000227349.2|C11orf63|ENSG00000109944.6|chromosome 11 open reading frame 63
hg19_v2_chr8_+_22132847_22132876	0.0965236	HOXA1	ENST00000521356.1|PIWIL2|ENSG00000197181.7|piwi-like RNA-mediated gene silencing 2
hg19_v2_chr1_+_226250379_226250427	0.095243	HOXA1	ENST00000366815.3|H3F3A|ENSG00000163041.5|H3 histone, family 3A 	ENST00000366814.3|H3F3A|ENSG00000163041.5|H3 histone, family 3A
hg19_v2_chr8_-_27115903_27115927	0.0946228	HOXA1	ENST00000350889.4|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000519997.1|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000519614.1|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000522908.1|STMN4|ENSG00000015592.12|stathmin-like 4 	ENST00000265770.7|STMN4|ENSG00000015592.12|stathmin-like 4
hg19_v2_chr5_-_137071689_137071709	0.0929632	HOXA1	ENST00000505853.1|KLHL3|ENSG00000146021.10|kelch-like family member 3
hg19_v2_chr6_+_90272027_90272120	0.0928856	HOXA1	ENST00000522441.1|ANKRD6|ENSG00000135299.12|ankyrin repeat domain 6
hg19_v2_chrX_+_9431324_9431371	0.0926342	HOXA1	ENST00000407597.2|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000424279.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000536365.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000441088.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000380961.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000415293.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked
hg19_v2_chr8_+_40010989_40011008	0.0921665	HOXA1	ENST00000315792.3|C8orf4|ENSG00000176907.3|chromosome 8 open reading frame 4
hg19_v2_chr6_-_41122063_41122094	0.090752	HOXA1	ENST00000426005.2|TREML1|ENSG00000161911.7|triggering receptor expressed on myeloid cells-like 1 	ENST00000437044.2|TREML1|ENSG00000161911.7|triggering receptor expressed on myeloid cells-like 1 	ENST00000373127.4|TREML1|ENSG00000161911.7|triggering receptor expressed on myeloid cells-like 1
hg19_v2_chr16_+_15596123_15596153	0.0896544	HOXA1	ENST00000452191.2|C16orf45|ENSG00000166780.6|chromosome 16 open reading frame 45
hg19_v2_chr1_+_12123414_12123445	0.08842	HOXA1	ENST00000263932.2|TNFRSF8|ENSG00000120949.10|tumor necrosis factor receptor superfamily, member 8
hg19_v2_chr13_+_30002741_30002776	0.0882442	HOXA1	ENST00000380808.2|MTUS2|ENSG00000132938.14|microtubule associated tumor suppressor candidate 2
hg19_v2_chr20_+_34742650_34742678	0.086013	HOXA1	ENST00000373945.1|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1 	ENST00000338074.2|EPB41L1|ENSG00000088367.16|erythrocyte membrane protein band 4.1-like 1
hg19_v2_chr1_-_12958101_12958101	0.0853214	HOXA1	ENST00000235347.4|PRAMEF10|ENSG00000187545.5|PRAME family member 10
hg19_v2_chr11_+_36317830_36317850	0.0841817	HOXA1	ENST00000530639.1|PRR5L|ENSG00000135362.9|proline rich 5 like
hg19_v2_chr19_-_51192661_51192661	0.082762	HOXA1	ENST00000391813.1|SHANK1|ENSG00000161681.11|SH3 and multiple ankyrin repeat domains 1
hg19_v2_chr1_-_203198790_203198807	0.079312	HOXA1	ENST00000367229.1|CHIT1|ENSG00000133063.11|chitinase 1 (chitotriosidase) 	ENST00000255427.3|CHIT1|ENSG00000133063.11|chitinase 1 (chitotriosidase) 	ENST00000535569.1|CHIT1|ENSG00000133063.11|chitinase 1 (chitotriosidase)
hg19_v2_chr8_-_114449112_114449328	0.0792879	HOXA1	ENST00000455883.2|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3 	ENST00000352409.3|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3 	ENST00000297405.5|CSMD3|ENSG00000164796.13|CUB and Sushi multiple domains 3
hg19_v2_chr20_+_8112824_8112925	0.0791353	HOXA1	ENST00000378641.3|PLCB1|ENSG00000182621.12|phospholipase C, beta 1 (phosphoinositide-specific)
hg19_v2_chr1_+_6615241_6615371	0.0786591	HOXA1	ENST00000333172.6|TAS1R1|ENSG00000173662.15|taste receptor, type 1, member 1 	ENST00000328191.4|TAS1R1|ENSG00000173662.15|taste receptor, type 1, member 1 	ENST00000351136.3|TAS1R1|ENSG00000173662.15|taste receptor, type 1, member 1
hg19_v2_chr12_-_123011476_123011527	0.0779155	HOXA1	ENST00000528279.1|RSRC2|ENSG00000111011.13|arginine/serine-rich coiled-coil 2 	ENST00000344591.4|RSRC2|ENSG00000111011.13|arginine/serine-rich coiled-coil 2 	ENST00000526560.2|RSRC2|ENSG00000111011.13|arginine/serine-rich coiled-coil 2
hg19_v2_chr1_-_100643765_100643829	0.0770844	HOXA1	ENST00000370137.1|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39 	ENST00000370138.1|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39 	ENST00000342895.3|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39
hg19_v2_chr13_+_102104952_102104966	0.0768156	HOXA1	ENST00000376180.3|ITGBL1|ENSG00000198542.9|integrin, beta-like 1 (with EGF-like repeat domains)
hg19_v2_chrM_+_9207_9255	0.0755774	HOXA1	ENST00000362079.2|MT-CO3|ENSG00000198938.2|mitochondrially encoded cytochrome c oxidase III
hg19_v2_chr17_+_79495397_79495558	0.0754937	HOXA1	ENST00000417245.2|FSCN2|ENSG00000186765.7|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus) 	ENST00000334850.7|FSCN2|ENSG00000186765.7|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)
hg19_v2_chr10_-_89623194_89623194	0.0752179	HOXA1	ENST00000445946.3|KLLN|ENSG00000227268.3|killin, p53-regulated DNA replication inhibitor
hg19_v2_chr1_+_17634689_17634696	0.0745441	HOXA1	ENST00000375453.1|PADI4|ENSG00000159339.9|peptidyl arginine deiminase, type IV 	ENST00000375448.4|PADI4|ENSG00000159339.9|peptidyl arginine deiminase, type IV
hg19_v2_chr15_+_84908573_84908671	0.0743048	HOXA1	ENST00000424966.1|GOLGA6L4|ENSG00000184206.7|golgin A6 family-like 4 	ENST00000422563.2|GOLGA6L4|ENSG00000184206.7|golgin A6 family-like 4
hg19_v2_chr11_+_7626950_7626971	0.0738187	HOXA1	ENST00000530181.1|PPFIBP2|ENSG00000166387.7|PTPRF interacting protein, binding protein 2 (liprin beta 2)
hg19_v2_chr8_-_119124045_119124097	0.0730715	HOXA1	ENST00000378204.2|EXT1|ENSG00000182197.6|exostosin glycosyltransferase 1
hg19_v2_chr4_+_113970772_113970885	0.0722141	HOXA1	ENST00000504454.1|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000394537.3|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000357077.4|ANK2|ENSG00000145362.12|ankyrin 2, neuronal 	ENST00000264366.6|ANK2|ENSG00000145362.12|ankyrin 2, neuronal
hg19_v2_chr3_+_179322573_179322614	0.0720835	HOXA1	ENST00000493866.1|NDUFB5|ENSG00000136521.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa 	ENST00000472629.1|NDUFB5|ENSG00000136521.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa 	ENST00000482604.1|NDUFB5|ENSG00000136521.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa
hg19_v2_chr1_+_100810575_100810584	0.071556	HOXA1	ENST00000542213.1|CDC14A|ENSG00000079335.13|cell division cycle 14A
hg19_v2_chr1_-_53018654_53018777	0.0706295	HOXA1	ENST00000257177.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000355809.4|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000528642.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000470626.1|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11 	ENST00000371544.3|ZCCHC11|ENSG00000134744.9|zinc finger, CCHC domain containing 11
hg19_v2_chr10_+_60272814_60272900	0.0700544	HOXA1	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr5_+_159656437_159656517	0.0693422	HOXA1	ENST00000402432.3|FABP6|ENSG00000170231.11|fatty acid binding protein 6, ileal
hg19_v2_chr14_-_81408093_81408129	0.0692831	HOXA1	ENST00000555265.1|CEP128|ENSG00000100629.12|centrosomal protein 128kDa
hg19_v2_chr1_-_182642017_182642049	0.0688034	HOXA1	ENST00000367557.4|RGS8|ENSG00000135824.8|regulator of G-protein signaling 8 	ENST00000258302.4|RGS8|ENSG00000135824.8|regulator of G-protein signaling 8
hg19_v2_chr12_+_123459127_123459364	0.0687245	HOXA1	ENST00000397389.2|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENST00000538755.1|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENST00000536150.1|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENST00000545056.1|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENST00000545612.1|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENST00000538628.1|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2 	ENST00000545317.1|OGFOD2|ENSG00000111325.12|2-oxoglutarate and iron-dependent oxygenase domain containing 2
hg19_v2_chr16_-_88752889_88752921	0.0680643	HOXA1	ENST00000332281.5|SNAI3|ENSG00000185669.5|snail family zinc finger 3
hg19_v2_chr1_-_111061797_111061797	0.0675702	HOXA1	ENST00000369771.2|KCNA10|ENSG00000143105.5|potassium voltage-gated channel, shaker-related subfamily, member 10
hg19_v2_chr12_-_86650045_86650076	0.0675345	HOXA1	ENST00000604798.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr3_+_111260856_111260948	0.0668186	HOXA1	ENST00000352690.4|CD96|ENSG00000153283.8|CD96 molecule
hg19_v2_chr1_-_153513170_153513170	0.0665836	HOXA1	ENST00000368717.2|S100A5|ENSG00000196420.3|S100 calcium binding protein A5
hg19_v2_chr1_-_241520385_241520457	0.0640305	HOXA1	ENST00000366564.1|RGS7|ENSG00000182901.11|regulator of G-protein signaling 7
hg19_v2_chr8_+_98788003_98788054	0.0627243	HOXA1	ENST00000521545.2|LAPTM4B|ENSG00000104341.12|lysosomal protein transmembrane 4 beta
hg19_v2_chr2_+_71205510_71205637	0.0623667	HOXA1	ENST00000272421.6|ANKRD53|ENSG00000144031.7|ankyrin repeat domain 53 	ENST00000441349.1|ANKRD53|ENSG00000144031.7|ankyrin repeat domain 53 	ENST00000457410.1|ANKRD53|ENSG00000144031.7|ankyrin repeat domain 53
hg19_v2_chr17_+_7328925_7328960	0.0620631	HOXA1	ENST00000333870.3|C17orf74|ENSG00000184560.3|chromosome 17 open reading frame 74 	ENST00000574034.1|C17orf74|ENSG00000184560.3|chromosome 17 open reading frame 74
hg19_v2_chr4_+_79567362_79567380	0.0618804	HOXA1	ENST00000512322.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094
hg19_v2_chr11_+_63706444_63706486	0.0616433	HOXA1	ENST00000377793.4|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000456907.2|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000539656.1|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit
hg19_v2_chr8_-_79717750_79717762	0.0608306	HOXA1	ENST00000263851.4|IL7|ENSG00000104432.8|interleukin 7 	ENST00000379113.2|IL7|ENSG00000104432.8|interleukin 7
hg19_v2_chr16_+_9056563_9056590	0.0596662	HOXA1	ENST00000564485.1|RP11-77H9.8|ENSG00000260979.1|RP11-77H9.8
hg19_v2_chrX_+_130192318_130192331	0.0596374	HOXA1	ENST00000370922.1|ARHGAP36|ENSG00000147256.6|Rho GTPase activating protein 36
hg19_v2_chr3_+_159570722_159570733	0.0590367	HOXA1	ENST00000482804.1|SCHIP1|ENSG00000151967.14|schwannomin interacting protein 1
hg19_v2_chr3_-_54962100_54962107	0.0585949	HOXA1	ENST00000273286.5|LRTM1|ENSG00000144771.7|leucine-rich repeats and transmembrane domains 1
hg19_v2_chr1_+_202976493_202976530	0.0584905	HOXA1	ENST00000367242.3|TMEM183A|ENSG00000163444.7|transmembrane protein 183A
hg19_v2_chr19_+_51630287_51630287	0.0577814	HOXA1	ENST00000599948.1|SIGLEC9|ENSG00000129450.4|sialic acid binding Ig-like lectin 9
hg19_v2_chr3_+_32993065_32993074	0.057074	HOXA1	ENST00000330953.5|CCR4|ENSG00000183813.6|chemokine (C-C motif) receptor 4
hg19_v2_chr2_-_219433014_219433100	0.0561458	HOXA1	ENST00000418019.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000454775.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000338465.5|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000415516.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000258399.3|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37
hg19_v2_chr6_-_28973037_28973094	0.0560662	HOXA1	ENST00000377179.3|ZNF311|ENSG00000197935.6|zinc finger protein 311
hg19_v2_chr3_+_159557637_159557650	0.0559089	HOXA1	ENST00000445224.2|SCHIP1|ENSG00000151967.14|schwannomin interacting protein 1
hg19_v2_chr22_-_29711645_29711694	0.0553128	HOXA1	ENST00000401450.3|RASL10A|ENSG00000100276.9|RAS-like, family 10, member A
hg19_v2_chr12_-_123011536_123011547	0.0552905	HOXA1	ENST00000331738.7|RSRC2|ENSG00000111011.13|arginine/serine-rich coiled-coil 2 	ENST00000354654.2|RSRC2|ENSG00000111011.13|arginine/serine-rich coiled-coil 2
hg19_v2_chr4_+_79567314_79567348	0.0551846	HOXA1	ENST00000503539.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094 	ENST00000504675.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094
hg19_v2_chr17_+_60447579_60447579	0.0551736	HOXA1	ENST00000450662.2|EFCAB3|ENSG00000172421.3|EF-hand calcium binding domain 3
hg19_v2_chr9_-_101471479_101471522	0.0544375	HOXA1	ENST00000259455.2|GABBR2|ENSG00000136928.4|gamma-aminobutyric acid (GABA) B receptor, 2
hg19_v2_chr19_-_50266580_50266587	0.0524789	HOXA1	ENST00000246801.3|TSKS|ENSG00000126467.6|testis-specific serine kinase substrate
hg19_v2_chr6_+_42123141_42123279	0.0522325	HOXA1	ENST00000418175.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000541991.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000053469.4|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000394237.1|GUCA1A|ENSG00000048545.9|guanylate cyclase activator 1A (retina) 	ENST00000372963.1|RP1-139D8.6|ENSG00000214732.1|RP1-139D8.6
hg19_v2_chr3_+_179322481_179322494	0.0506779	HOXA1	ENST00000259037.3|NDUFB5|ENSG00000136521.8|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa
hg19_v2_chr6_+_50061315_50061424	0.0504315	HOXA1	ENST00000415106.1|RP11-397G17.1|ENSG00000226733.1|RP11-397G17.1
hg19_v2_chr1_+_65730385_65730468	0.0504281	HOXA1	ENST00000263441.7|DNAJC6|ENSG00000116675.11|DnaJ (Hsp40) homolog, subfamily C, member 6 	ENST00000395325.3|DNAJC6|ENSG00000116675.11|DnaJ (Hsp40) homolog, subfamily C, member 6
hg19_v2_chr6_-_106773610_106773700	0.0491018	HOXA1	ENST00000369076.3|ATG5|ENSG00000057663.8|autophagy related 5 	ENST00000369070.1|ATG5|ENSG00000057663.8|autophagy related 5
hg19_v2_chr4_+_166300084_166300094	0.0490157	HOXA1	ENST00000402744.4|CPE|ENSG00000109472.9|carboxypeptidase E
hg19_v2_chr12_-_10962767_10962767	0.0482289	HOXA1	ENST00000240691.2|TAS2R9|ENSG00000121381.2|taste receptor, type 2, member 9
hg19_v2_chr19_-_49944806_49944819	0.0474662	HOXA1	ENST00000221485.3|SLC17A7|ENSG00000104888.5|solute carrier family 17 (vesicular glutamate transporter), member 7
hg19_v2_chrX_+_37639302_37639326	0.046747	HOXA1	ENST00000545017.1|CYBB|ENSG00000165168.6|cytochrome b-245, beta polypeptide 	ENST00000536160.1|CYBB|ENSG00000165168.6|cytochrome b-245, beta polypeptide
hg19_v2_chr14_+_24702127_24702154	0.0459922	HOXA1	ENST00000557854.1|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2 	ENST00000348719.7|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2 	ENST00000559104.1|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2 	ENST00000456667.3|GMPR2|ENSG00000100938.13|guanosine monophosphate reductase 2
hg19_v2_chr14_-_81408031_81408057	0.0449871	HOXA1	ENST00000216517.6|CEP128|ENSG00000100629.12|centrosomal protein 128kDa
hg19_v2_chr3_+_196366555_196366572	0.0449259	HOXA1	ENST00000328557.4|NRROS|ENSG00000174004.5|negative regulator of reactive oxygen species
hg19_v2_chr3_-_146262488_146262548	0.0444853	HOXA1	ENST00000487389.1|PLSCR1|ENSG00000188313.8|phospholipid scramblase 1
hg19_v2_chr7_+_104654623_104654669	0.0428737	HOXA1	ENST00000311117.3|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000334877.4|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000257745.4|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000334914.7|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000478990.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000495267.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000476671.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E
hg19_v2_chr11_-_72353451_72353492	0.0425784	HOXA1	ENST00000376450.3|PDE2A|ENSG00000186642.11|phosphodiesterase 2A, cGMP-stimulated
hg19_v2_chr9_-_116037840_116037876	0.0418754	HOXA1	ENST00000374206.3|CDC26|ENSG00000176386.4|cell division cycle 26
hg19_v2_chr5_-_141338627_141338627	0.0410779	HOXA1	ENST00000231484.3|PCDH12|ENSG00000113555.4|protocadherin 12
hg19_v2_chr12_-_21927736_21927768	0.0408919	HOXA1	ENST00000240662.2|KCNJ8|ENSG00000121361.3|potassium inwardly-rectifying channel, subfamily J, member 8
hg19_v2_chr7_+_94139105_94139197	0.0407836	HOXA1	ENST00000297273.4|CASD1|ENSG00000127995.12|CAS1 domain containing 1
hg19_v2_chr11_-_116643688_116643719	0.0402337	HOXA1	ENST00000375445.3|BUD13|ENSG00000137656.7|BUD13 homolog (S. cerevisiae) 	ENST00000260210.4|BUD13|ENSG00000137656.7|BUD13 homolog (S. cerevisiae)
hg19_v2_chr9_+_113431029_113431051	0.0402112	HOXA1	ENST00000189978.5|MUSK|ENSG00000030304.8|muscle, skeletal, receptor tyrosine kinase 	ENST00000374448.4|MUSK|ENSG00000030304.8|muscle, skeletal, receptor tyrosine kinase 	ENST00000374440.3|MUSK|ENSG00000030304.8|muscle, skeletal, receptor tyrosine kinase
hg19_v2_chr12_+_8276433_8276493	0.0392448	HOXA1	ENST00000345999.3|CLEC4A|ENSG00000111729.8|C-type lectin domain family 4, member A 	ENST00000352620.3|CLEC4A|ENSG00000111729.8|C-type lectin domain family 4, member A 	ENST00000360500.3|CLEC4A|ENSG00000111729.8|C-type lectin domain family 4, member A
hg19_v2_chr3_+_132757215_132757261	0.0390235	HOXA1	ENST00000321871.6|TMEM108|ENSG00000144868.9|transmembrane protein 108 	ENST00000393130.3|TMEM108|ENSG00000144868.9|transmembrane protein 108 	ENST00000514894.1|TMEM108|ENSG00000144868.9|transmembrane protein 108 	ENST00000512662.1|TMEM108|ENSG00000144868.9|transmembrane protein 108
hg19_v2_chrX_+_48455866_48455905	0.0386787	HOXA1	ENST00000376729.5|WDR13|ENSG00000101940.13|WD repeat domain 13 	ENST00000218056.5|WDR13|ENSG00000101940.13|WD repeat domain 13
hg19_v2_chr10_+_89264625_89264637	0.0386551	HOXA1	ENST00000371996.4|MINPP1|ENSG00000107789.11|multiple inositol-polyphosphate phosphatase 1 	ENST00000371994.4|MINPP1|ENSG00000107789.11|multiple inositol-polyphosphate phosphatase 1
hg19_v2_chr18_+_18943554_18943587	0.0384267	HOXA1	ENST00000580732.2|GREB1L|ENSG00000141449.10|growth regulation by estrogen in breast cancer-like
hg19_v2_chr13_+_92050928_92050946	0.0382564	HOXA1	ENST00000377067.3|GPC5|ENSG00000179399.9|glypican 5
hg19_v2_chr19_+_13875316_13875385	0.0379221	HOXA1	ENST00000319545.8|MRI1|ENSG00000037757.9|methylthioribose-1-phosphate isomerase 1 	ENST00000593245.1|MRI1|ENSG00000037757.9|methylthioribose-1-phosphate isomerase 1 	ENST00000040663.6|MRI1|ENSG00000037757.9|methylthioribose-1-phosphate isomerase 1
hg19_v2_chr16_+_25703274_25703350	0.0378813	HOXA1	ENST00000331351.5|HS3ST4|ENSG00000182601.6|heparan sulfate (glucosamine) 3-O-sulfotransferase 4
hg19_v2_chr9_-_21217310_21217310	0.0374659	HOXA1	ENST00000380216.1|IFNA16|ENSG00000147885.2|interferon, alpha 16
hg19_v2_chr19_-_45735138_45735138	0.0366914	HOXA1	ENST00000252482.3|EXOC3L2|ENSG00000130201.3|exocyst complex component 3-like 2
hg19_v2_chr12_+_93096619_93096750	0.0360119	HOXA1	ENST00000397833.3|C12orf74|ENSG00000214215.3|chromosome 12 open reading frame 74
hg19_v2_chr6_+_99282570_99282591	0.0356168	HOXA1	ENST00000328345.5|POU3F2|ENSG00000184486.7|POU class 3 homeobox 2
hg19_v2_chr6_-_31560729_31560768	0.0354799	HOXA1	ENST00000340027.5|NCR3|ENSG00000204475.5|natural cytotoxicity triggering receptor 3 	ENST00000376073.4|NCR3|ENSG00000204475.5|natural cytotoxicity triggering receptor 3 	ENST00000376072.3|NCR3|ENSG00000204475.5|natural cytotoxicity triggering receptor 3
hg19_v2_chr11_-_61647935_61648020	0.0342721	HOXA1	ENST00000531956.1|FADS3|ENSG00000221968.4|fatty acid desaturase 3
hg19_v2_chr13_+_28519343_28519343	0.0334152	HOXA1	ENST00000381026.3|ATP5EP2|ENSG00000180389.6|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit pseudogene 2
hg19_v2_chr5_-_36152031_36152063	0.0332036	HOXA1	ENST00000296603.4|LMBRD2|ENSG00000164187.6|LMBR1 domain containing 2
hg19_v2_chr12_-_49449107_49449107	0.0327195	HOXA1	ENST00000301067.7|KMT2D|ENSG00000167548.10|lysine (K)-specific methyltransferase 2D
hg19_v2_chr3_-_145878954_145878979	0.0326844	HOXA1	ENST00000282903.5|PLOD2|ENSG00000152952.7|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 	ENST00000360060.3|PLOD2|ENSG00000152952.7|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2
hg19_v2_chr4_-_90229142_90229217	0.0322771	HOXA1	ENST00000609438.1|GPRIN3|ENSG00000185477.4|GPRIN family member 3
hg19_v2_chr14_-_77965151_77965210	0.0319307	HOXA1	ENST00000393684.3|ISM2|ENSG00000100593.13|isthmin 2 	ENST00000493585.1|ISM2|ENSG00000100593.13|isthmin 2 	ENST00000554801.2|ISM2|ENSG00000100593.13|isthmin 2 	ENST00000342219.4|ISM2|ENSG00000100593.13|isthmin 2 	ENST00000412904.1|ISM2|ENSG00000100593.13|isthmin 2 	ENST00000429906.1|ISM2|ENSG00000100593.13|isthmin 2
hg19_v2_chr2_-_170681375_170681441	0.0317923	HOXA1	ENST00000410097.1|METTL5|ENSG00000138382.9|methyltransferase like 5 	ENST00000308099.3|METTL5|ENSG00000138382.9|methyltransferase like 5 	ENST00000409837.1|METTL5|ENSG00000138382.9|methyltransferase like 5 	ENST00000538491.1|METTL5|ENSG00000138382.9|methyltransferase like 5 	ENST00000260953.5|METTL5|ENSG00000138382.9|methyltransferase like 5 	ENST00000409965.1|METTL5|ENSG00000138382.9|methyltransferase like 5 	ENST00000392640.2|METTL5|ENSG00000138382.9|methyltransferase like 5
hg19_v2_chr19_+_16435625_16435682	0.0300795	HOXA1	ENST00000248071.5|KLF2|ENSG00000127528.5|Kruppel-like factor 2 	ENST00000592003.1|KLF2|ENSG00000127528.5|Kruppel-like factor 2
hg19_v2_chr12_-_88423164_88423196	0.0298884	HOXA1	ENST00000298699.2|C12orf50|ENSG00000165805.5|chromosome 12 open reading frame 50 	ENST00000550553.1|C12orf50|ENSG00000165805.5|chromosome 12 open reading frame 50
hg19_v2_chr1_-_40098672_40098672	0.0297397	HOXA1	ENST00000535435.1|HEYL|ENSG00000163909.6|hes-related family bHLH transcription factor with YRPW motif-like
hg19_v2_chr20_+_30467600_30467641	0.0296839	HOXA1	ENST00000375934.4|TTLL9|ENSG00000131044.12|tubulin tyrosine ligase-like family, member 9 	ENST00000375922.4|TTLL9|ENSG00000131044.12|tubulin tyrosine ligase-like family, member 9
hg19_v2_chr12_-_89919965_89919978	0.029202	HOXA1	ENST00000548729.1|POC1B-GALNT4|ENSG00000259075.2|POC1B-GALNT4 readthrough
hg19_v2_chr6_-_149867122_149867201	0.0290978	HOXA1	ENST00000253329.2|PPIL4|ENSG00000131013.3|peptidylprolyl isomerase (cyclophilin)-like 4
hg19_v2_chr21_-_46340884_46341048	0.0287422	HOXA1	ENST00000302347.5|ITGB2|ENSG00000160255.12|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit) 	ENST00000517819.1|ITGB2|ENSG00000160255.12|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
hg19_v2_chr3_-_179322436_179322447	0.0280904	HOXA1	ENST00000392659.2|MRPL47|ENSG00000136522.9|mitochondrial ribosomal protein L47 	ENST00000476781.1|MRPL47|ENSG00000136522.9|mitochondrial ribosomal protein L47
hg19_v2_chr7_-_27170352_27170418	0.0260076	HOXA1	ENST00000428284.2|HOXA4|ENSG00000197576.9|homeobox A4 	ENST00000360046.5|HOXA4|ENSG00000197576.9|homeobox A4
hg19_v2_chr11_+_68228186_68228281	0.0251464	HOXA1	ENST00000393799.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393800.2|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000528635.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000533127.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529907.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529344.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000534534.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524845.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265637.4|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000524904.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000393801.3|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000265636.5|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3 	ENST00000529710.1|PPP6R3|ENSG00000110075.10|protein phosphatase 6, regulatory subunit 3
hg19_v2_chr8_+_22132810_22132844	0.0249578	HOXA1	ENST00000356766.6|PIWIL2|ENSG00000197181.7|piwi-like RNA-mediated gene silencing 2
hg19_v2_chrX_+_70443050_70443061	0.0247683	HOXA1	ENST00000361726.6|GJB1|ENSG00000169562.9|gap junction protein, beta 1, 32kDa
hg19_v2_chr19_+_58180303_58180303	0.0247607	HOXA1	ENST00000318203.5|ZSCAN4|ENSG00000180532.6|zinc finger and SCAN domain containing 4
hg19_v2_chr2_-_170681324_170681372	0.0246523	HOXA1	ENST00000409340.1|METTL5|ENSG00000138382.9|methyltransferase like 5
hg19_v2_chr5_-_151138200_151138217	0.024551	HOXA1	ENST00000313115.6|ATOX1|ENSG00000177556.7|antioxidant 1 copper chaperone 	ENST00000522710.1|ATOX1|ENSG00000177556.7|antioxidant 1 copper chaperone
hg19_v2_chr20_-_23618582_23618663	0.0245403	HOXA1	ENST00000398411.1|CST3|ENSG00000101439.4|cystatin C 	ENST00000376925.3|CST3|ENSG00000101439.4|cystatin C
hg19_v2_chr4_-_73434498_73434516	0.0245191	HOXA1	ENST00000286657.4|ADAMTS3|ENSG00000156140.4|ADAM metallopeptidase with thrombospondin type 1 motif, 3
hg19_v2_chr22_+_19419425_19419425	0.0244279	HOXA1	ENST00000333130.3|MRPL40|ENSG00000185608.4|mitochondrial ribosomal protein L40
hg19_v2_chr20_-_30458491_30458550	0.0240488	HOXA1	ENST00000339738.5|DUSP15|ENSG00000149599.11|dual specificity phosphatase 15
hg19_v2_chr3_-_49967292_49967327	0.023623	HOXA1	ENST00000455683.2|MON1A|ENSG00000164077.9|MON1 secretory trafficking family member A
hg19_v2_chr10_-_106240032_106240047	0.0229119	HOXA1	ENST00000447860.1|RP11-127O4.3|ENSG00000225768.1|RP11-127O4.3
hg19_v2_chr3_-_179322416_179322435	0.0227826	HOXA1	ENST00000259038.2|MRPL47|ENSG00000136522.9|mitochondrial ribosomal protein L47
hg19_v2_chr6_+_73331520_73331578	0.0224102	HOXA1	ENST00000342056.2|KCNQ5|ENSG00000185760.11|potassium voltage-gated channel, KQT-like subfamily, member 5 	ENST00000355194.4|KCNQ5|ENSG00000185760.11|potassium voltage-gated channel, KQT-like subfamily, member 5
hg19_v2_chr14_-_106692191_106692211	0.0223171	HOXA1	ENST00000390607.2|IGHV3-21|ENSG00000211947.2|immunoglobulin heavy variable 3-21
hg19_v2_chr3_+_49059038_49059067	0.0217968	HOXA1	ENST00000451378.2|NDUFAF3|ENSG00000178057.10|NADH dehydrogenase (ubiquinone) complex I, assembly factor 3
hg19_v2_chr12_+_58148842_58148929	0.0217648	HOXA1	ENST00000266643.5|MARCH9|ENSG00000139266.5|membrane-associated ring finger (C3HC4) 9
hg19_v2_chr3_+_150264458_150264481	0.0211625	HOXA1	ENST00000487799.1|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa 	ENST00000460851.1|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa
hg19_v2_chr2_+_233897382_233897382	0.0209799	HOXA1	ENST00000233840.3|NEU2|ENSG00000115488.3|sialidase 2 (cytosolic sialidase)
hg19_v2_chr1_-_7913089_7913096	0.0207724	HOXA1	ENST00000361696.5|UTS2|ENSG00000049247.9|urotensin 2
hg19_v2_chr4_-_145061788_145061904	0.0207159	HOXA1	ENST00000512064.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000512789.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000504786.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000503627.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000535709.1|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000283126.7|GYPB|ENSG00000250361.2|glycophorin B (MNS blood group) 	ENST00000324022.10|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group) 	ENST00000360771.4|GYPA|ENSG00000170180.15|glycophorin A (MNS blood group)
hg19_v2_chr3_+_150264555_150264592	0.0203562	HOXA1	ENST00000406576.3|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa 	ENST00000482093.1|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa 	ENST00000273435.5|EIF2A|ENSG00000144895.7|eukaryotic translation initiation factor 2A, 65kDa
hg19_v2_chr2_+_181845074_181845118	0.020088	HOXA1	ENST00000602959.1|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3 	ENST00000602479.1|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3 	ENST00000392415.2|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3 	ENST00000602291.1|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3
hg19_v2_chr19_+_19144384_19144473	0.0200391	HOXA1	ENST00000392335.2|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000535612.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000537263.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000540707.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000541725.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000269932.6|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000546344.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000540792.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000536098.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000541898.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000543877.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6
hg19_v2_chr11_-_46142948_46143043	0.0199047	HOXA1	ENST00000257821.4|PHF21A|ENSG00000135365.11|PHD finger protein 21A
hg19_v2_chr16_+_23847339_23847350	0.0194294	HOXA1	ENST00000303531.7|PRKCB|ENSG00000166501.8|protein kinase C, beta
hg19_v2_chr8_+_96037205_96037253	0.0190968	HOXA1	ENST00000396124.4|NDUFAF6|ENSG00000156170.8|NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
hg19_v2_chr11_+_60739249_60739338	0.0185748	HOXA1	ENST00000542157.1|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000433107.2|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000452451.2|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000352009.5|CD6|ENSG00000013725.10|CD6 molecule
hg19_v2_chr12_+_12878829_12878871	0.018376	HOXA1	ENST00000326765.6|APOLD1|ENSG00000178878.8|apolipoprotein L domain containing 1
hg19_v2_chr5_+_125758865_125758876	0.0182181	HOXA1	ENST00000542322.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3 	ENST00000544396.1|GRAMD3|ENSG00000155324.5|GRAM domain containing 3
hg19_v2_chr20_+_60174827_60174849	0.017396	HOXA1	ENST00000543233.1|CDH4|ENSG00000179242.11|cadherin 4, type 1, R-cadherin (retinal)
hg19_v2_chr2_-_4021643_4021660	0.0172216	HOXA1	ENST00000454455.1|AC107070.1|ENSG00000237401.2|AC107070.1
hg19_v2_chr17_+_7758374_7758390	0.0171319	HOXA1	ENST00000301599.6|TMEM88|ENSG00000167874.6|transmembrane protein 88 	ENST00000574668.1|TMEM88|ENSG00000167874.6|transmembrane protein 88
hg19_v2_chr2_+_44396000_44396053	0.0160985	HOXA1	ENST00000409895.4|PPM1B|ENSG00000138032.16|protein phosphatase, Mg2+/Mn2+ dependent, 1B 	ENST00000409432.3|PPM1B|ENSG00000138032.16|protein phosphatase, Mg2+/Mn2+ dependent, 1B 	ENST00000282412.4|PPM1B|ENSG00000138032.16|protein phosphatase, Mg2+/Mn2+ dependent, 1B 	ENST00000378551.2|PPM1B|ENSG00000138032.16|protein phosphatase, Mg2+/Mn2+ dependent, 1B 	ENST00000345249.4|PPM1B|ENSG00000138032.16|protein phosphatase, Mg2+/Mn2+ dependent, 1B
hg19_v2_chr22_+_29834572_29834572	0.0158693	HOXA1	ENST00000354373.2|RFPL1|ENSG00000128250.5|ret finger protein-like 1
hg19_v2_chr18_-_3874271_3874337	0.0158163	HOXA1	ENST00000400149.3|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1 	ENST00000400155.1|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1 	ENST00000400150.3|DLGAP1|ENSG00000170579.10|discs, large (Drosophila) homolog-associated protein 1
hg19_v2_chr19_+_5681011_5681075	0.015261	HOXA1	ENST00000581893.1|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000411793.2|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000301382.4|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000581773.1|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000423665.2|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000583928.1|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000342970.2|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000422535.2|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000581521.1|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like 	ENST00000339423.2|HSD11B1L|ENSG00000167733.9|hydroxysteroid (11-beta) dehydrogenase 1-like
hg19_v2_chr10_-_31146615_31146708	0.0146758	HOXA1	ENST00000444692.2|ZNF438|ENSG00000183621.11|zinc finger protein 438
hg19_v2_chr1_-_151319710_151319833	0.0145893	HOXA1	ENST00000290524.4|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000437327.1|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000452513.2|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000368870.2|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression) 	ENST00000452671.2|RFX5|ENSG00000143390.13|regulatory factor X, 5 (influences HLA class II expression)
hg19_v2_chr2_+_27255806_27255879	0.0145863	HOXA1	ENST00000238788.9|TMEM214|ENSG00000119777.14|transmembrane protein 214 	ENST00000404032.3|TMEM214|ENSG00000119777.14|transmembrane protein 214
hg19_v2_chr1_+_45140360_45140399	0.014438	HOXA1	ENST00000418644.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000458657.2|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000441519.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000535358.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228 	ENST00000445071.1|C1orf228|ENSG00000198520.6|chromosome 1 open reading frame 228
hg19_v2_chr5_+_78532003_78532017	0.0136429	HOXA1	ENST00000396137.4|JMY|ENSG00000152409.8|junction mediating and regulatory protein, p53 cofactor
hg19_v2_chr1_+_162602244_162602289	0.012741	HOXA1	ENST00000367922.3|DDR2|ENSG00000162733.12|discoidin domain receptor tyrosine kinase 2 	ENST00000367921.3|DDR2|ENSG00000162733.12|discoidin domain receptor tyrosine kinase 2
hg19_v2_chr12_-_96794143_96794264	0.012329	HOXA1	ENST00000543119.2|CDK17|ENSG00000059758.3|cyclin-dependent kinase 17
hg19_v2_chr16_-_52119019_52119021	0.0121961	HOXA1	ENST00000561513.1|LINC00919|ENSG00000260268.1|long intergenic non-protein coding RNA 919 	ENST00000565742.1|LINC00919|ENSG00000260268.1|long intergenic non-protein coding RNA 919
hg19_v2_chr12_-_86650077_86650095	0.0118409	HOXA1	ENST00000552808.2|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) 	ENST00000547225.1|MGAT4C|ENSG00000182050.9|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
hg19_v2_chr9_+_113431059_113431077	0.0116566	HOXA1	ENST00000416899.2|MUSK|ENSG00000030304.8|muscle, skeletal, receptor tyrosine kinase
hg19_v2_chr1_-_103574024_103574063	0.0103949	HOXA1	ENST00000512756.1|COL11A1|ENSG00000060718.14|collagen, type XI, alpha 1 	ENST00000370096.3|COL11A1|ENSG00000060718.14|collagen, type XI, alpha 1 	ENST00000358392.2|COL11A1|ENSG00000060718.14|collagen, type XI, alpha 1 	ENST00000353414.4|COL11A1|ENSG00000060718.14|collagen, type XI, alpha 1
hg19_v2_chr12_-_51740463_51740463	0.00980153	HOXA1	ENST00000293636.1|CELA1|ENSG00000139610.1|chymotrypsin-like elastase family, member 1
hg19_v2_chr16_+_71660079_71660102	0.00894564	HOXA1	ENST00000565261.1|MARVELD3|ENSG00000140832.5|MARVEL domain containing 3 	ENST00000268485.3|MARVELD3|ENSG00000140832.5|MARVEL domain containing 3 	ENST00000299952.4|MARVELD3|ENSG00000140832.5|MARVEL domain containing 3
hg19_v2_chr7_-_44180884_44180937	0.0066517	HOXA1	ENST00000458240.1|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory 	ENST00000223364.3|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory
hg19_v2_chr12_-_96794330_96794375	0.00662531	HOXA1	ENST00000261211.3|CDK17|ENSG00000059758.3|cyclin-dependent kinase 17
hg19_v2_chr17_-_3195876_3195876	0.0062873	HOXA1	ENST00000323404.1|OR3A1|ENSG00000180090.3|olfactory receptor, family 3, subfamily A, member 1
hg19_v2_chr10_+_21823079_21823102	0.00600455	HOXA1	ENST00000377100.3|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 	ENST00000377072.3|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 	ENST00000446906.2|MLLT10|ENSG00000078403.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
hg19_v2_chr11_+_63870660_63870660	0.00574996	HOXA1	ENST00000246841.3|FLRT1|ENSG00000126500.3|fibronectin leucine rich transmembrane protein 1
hg19_v2_chr13_-_46425865_46425902	0.00556376	HOXA1	ENST00000400405.2|SIAH3|ENSG00000215475.3|siah E3 ubiquitin protein ligase family member 3
hg19_v2_chr3_-_149688655_149688737	0.0050155	HOXA1	ENST00000461930.1|PFN2|ENSG00000070087.9|profilin 2 	ENST00000423691.2|PFN2|ENSG00000070087.9|profilin 2 	ENST00000490975.1|PFN2|ENSG00000070087.9|profilin 2 	ENST00000461868.1|PFN2|ENSG00000070087.9|profilin 2 	ENST00000452853.2|PFN2|ENSG00000070087.9|profilin 2
hg19_v2_chrX_+_82763265_82763283	0.00420479	HOXA1	ENST00000373200.2|POU3F4|ENSG00000196767.4|POU class 3 homeobox 4
hg19_v2_chr14_+_57046500_57046529	0.00366638	HOXA1	ENST00000261556.6|TMEM260|ENSG00000070269.9|transmembrane protein 260
hg19_v2_chr4_-_144826682_144826716	0.00270012	HOXA1	ENST00000358615.4|GYPE|ENSG00000197465.9|glycophorin E (MNS blood group) 	ENST00000437468.2|GYPE|ENSG00000197465.9|glycophorin E (MNS blood group)
hg19_v2_chr22_+_44577237_44577278	0.00245979	HOXA1	ENST00000415224.1|PARVG|ENSG00000138964.12|parvin, gamma 	ENST00000417767.1|PARVG|ENSG00000138964.12|parvin, gamma
hg19_v2_chr16_-_21431078_21431078	0.00206425	HOXA1	ENST00000458643.2|NPIPB3|ENSG00000169246.12|nuclear pore complex interacting protein family, member B3
hg19_v2_chr8_-_101734907_101735037	0.00179289	HOXA1	ENST00000318607.5|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000521865.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000520804.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000522720.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1 	ENST00000521067.1|PABPC1|ENSG00000070756.9|poly(A) binding protein, cytoplasmic 1
hg19_v2_chr2_+_181845298_181845378	0.00147578	HOXA1	ENST00000410062.4|UBE2E3|ENSG00000170035.11|ubiquitin-conjugating enzyme E2E 3
hg19_v2_chr4_+_2470664_2470882	0.000610943	HOXA1	ENST00000314289.8|RNF4|ENSG00000063978.11|ring finger protein 4 	ENST00000541204.1|RNF4|ENSG00000063978.11|ring finger protein 4 	ENST00000502316.1|RNF4|ENSG00000063978.11|ring finger protein 4 	ENST00000507247.1|RNF4|ENSG00000063978.11|ring finger protein 4 	ENST00000509258.1|RNF4|ENSG00000063978.11|ring finger protein 4 	ENST00000511859.1|RNF4|ENSG00000063978.11|ring finger protein 4
