hg19_v2_chr11_-_115375107_115375283	0.991369	GUAACAG	ENST00000545380.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000452722.3|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000537058.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000536727.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000542447.2|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000331581.6|CADM1|ENSG00000182985.12|cell adhesion molecule 1
hg19_v2_chr12_-_76425368_76425384	0.546973	GUAACAG	ENST00000602540.1|PHLDA1|ENSG00000139289.9|pleckstrin homology-like domain, family A, member 1
hg19_v2_chr5_-_59995921_59996000	0.424996	GUAACAG	ENST00000453022.2|DEPDC1B|ENSG00000035499.8|DEP domain containing 1B 	ENST00000545085.1|DEPDC1B|ENSG00000035499.8|DEP domain containing 1B 	ENST00000265036.5|DEPDC1B|ENSG00000035499.8|DEP domain containing 1B
hg19_v2_chr2_-_208030647_208030689	0.420589	GUAACAG	ENST00000309446.6|KLF7|ENSG00000118263.10|Kruppel-like factor 7 (ubiquitous)
hg19_v2_chr7_-_94285511_94285522	0.401312	GUAACAG	ENST00000265735.7|SGCE|ENSG00000127990.11|sarcoglycan, epsilon
hg19_v2_chr21_-_16437255_16437340	0.401009	GUAACAG	ENST00000400199.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1 	ENST00000400202.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1
hg19_v2_chr15_+_39873268_39873294	0.399301	GUAACAG	ENST00000397591.2|THBS1|ENSG00000137801.9|thrombospondin 1 	ENST00000260356.5|THBS1|ENSG00000137801.9|thrombospondin 1
hg19_v2_chr14_+_55034599_55034637	0.382991	GUAACAG	ENST00000392067.3|SAMD4A|ENSG00000020577.9|sterile alpha motif domain containing 4A 	ENST00000357634.3|SAMD4A|ENSG00000020577.9|sterile alpha motif domain containing 4A
hg19_v2_chr14_+_85996471_85996497	0.376764	GUAACAG	ENST00000330753.4|FLRT2|ENSG00000185070.6|fibronectin leucine rich transmembrane protein 2
hg19_v2_chr5_-_139726181_139726216	0.366502	GUAACAG	ENST00000507104.1|HBEGF|ENSG00000113070.6|heparin-binding EGF-like growth factor 	ENST00000230990.6|HBEGF|ENSG00000113070.6|heparin-binding EGF-like growth factor
hg19_v2_chr2_+_210444142_210444194	0.32828	GUAACAG	ENST00000360351.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2 	ENST00000361559.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr15_-_34628951_34629045	0.326396	GUAACAG	ENST00000397707.2|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6 	ENST00000560611.1|SLC12A6|ENSG00000140199.7|solute carrier family 12 (potassium/chloride transporter), member 6
hg19_v2_chr22_-_22221900_22221970	0.320109	GUAACAG	ENST00000215832.6|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1 	ENST00000398822.3|MAPK1|ENSG00000100030.10|mitogen-activated protein kinase 1
hg19_v2_chr17_-_33448468_33448513	0.310359	GUAACAG	ENST00000591723.1|RAD51L3-RFFL|ENSG00000267618.1|Uncharacterized protein  	ENST00000587405.1|RAD51D|ENSG00000185379.16|RAD51 paralog D 	ENST00000593039.1|RAD51L3-RFFL|ENSG00000267618.1|Uncharacterized protein
hg19_v2_chr10_-_75634260_75634321	0.310074	GUAACAG	ENST00000372765.1|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma 	ENST00000351293.3|CAMK2G|ENSG00000148660.16|calcium/calmodulin-dependent protein kinase II gamma
hg19_v2_chr22_+_40390930_40390994	0.302296	GUAACAG	ENST00000333407.6|FAM83F|ENSG00000133477.12|family with sequence similarity 83, member F
hg19_v2_chr7_-_98741642_98741713	0.302284	GUAACAG	ENST00000361368.2|SMURF1|ENSG00000198742.5|SMAD specific E3 ubiquitin protein ligase 1
hg19_v2_chr14_-_35182994_35183034	0.290796	GUAACAG	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr8_+_42752053_42752154	0.252419	GUAACAG	ENST00000307602.4|HOOK3|ENSG00000168172.4|hook microtubule-tethering protein 3
hg19_v2_chr12_+_93965451_93965494	0.250866	GUAACAG	ENST00000548537.1|SOCS2|ENSG00000120833.9|suppressor of cytokine signaling 2
hg19_v2_chr2_+_102508955_102508955	0.229508	GUAACAG	ENST00000414004.2|FLJ20373|ENSG00000233404.2|FLJ20373
hg19_v2_chr10_-_33623564_33623603	0.22549	GUAACAG	ENST00000374875.1|NRP1|ENSG00000099250.13|neuropilin 1 	ENST00000374822.4|NRP1|ENSG00000099250.13|neuropilin 1
hg19_v2_chr3_+_150126101_150126122	0.217477	GUAACAG	ENST00000361875.3|TSC22D2|ENSG00000196428.8|TSC22 domain family, member 2 	ENST00000361136.2|TSC22D2|ENSG00000196428.8|TSC22 domain family, member 2
hg19_v2_chr14_-_91282726_91282804	0.213631	GUAACAG	ENST00000328459.6|TTC7B|ENSG00000165914.10|tetratricopeptide repeat domain 7B 	ENST00000357056.2|TTC7B|ENSG00000165914.10|tetratricopeptide repeat domain 7B
hg19_v2_chr4_+_37245799_37245842	0.208776	GUAACAG	ENST00000309447.5|KIAA1239|ENSG00000174145.7|KIAA1239
hg19_v2_chr17_-_62658186_62658231	0.201048	GUAACAG	ENST00000262435.9|SMURF2|ENSG00000108854.11|SMAD specific E3 ubiquitin protein ligase 2
hg19_v2_chr11_+_95523621_95523710	0.197143	GUAACAG	ENST00000325542.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000325486.5|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000544522.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa 	ENST00000541365.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa
hg19_v2_chr3_+_152879985_152880038	0.195382	GUAACAG	ENST00000323534.2|RAP2B|ENSG00000181467.2|RAP2B, member of RAS oncogene family
hg19_v2_chr17_-_33416231_33416338	0.195194	GUAACAG	ENST00000584655.1|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 	ENST00000447669.2|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 	ENST00000315249.7|RFFL|ENSG00000092871.12|ring finger and FYVE-like domain containing E3 ubiquitin protein ligase
hg19_v2_chr19_-_40791302_40791443	0.193469	GUAACAG	ENST00000392038.2|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2 	ENST00000578123.1|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2
hg19_v2_chr7_+_77166592_77166653	0.192583	GUAACAG	ENST00000248594.6|PTPN12|ENSG00000127947.11|protein tyrosine phosphatase, non-receptor type 12
hg19_v2_chr3_-_98620500_98620547	0.190617	GUAACAG	ENST00000326840.6|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chr1_-_166028709_166028709	0.167955	GUAACAG	ENST00000595430.1|AL626787.1|ENSG00000267884.1|AL626787.1
hg19_v2_chr1_+_52682052_52682052	0.164133	GUAACAG	ENST00000371591.1|ZFYVE9|ENSG00000157077.10|zinc finger, FYVE domain containing 9
hg19_v2_chr2_-_122407097_122407163	0.160535	GUAACAG	ENST00000409078.3|CLASP1|ENSG00000074054.13|cytoplasmic linker associated protein 1
hg19_v2_chr1_+_184356188_184356200	0.151263	GUAACAG	ENST00000235307.6|C1orf21|ENSG00000116667.8|chromosome 1 open reading frame 21
hg19_v2_chr8_+_55370487_55370503	0.137057	GUAACAG	ENST00000297316.4|SOX17|ENSG00000164736.5|SRY (sex determining region Y)-box 17
hg19_v2_chr3_+_39851094_39851151	0.134946	GUAACAG	ENST00000302541.6|MYRIP|ENSG00000170011.9|myosin VIIA and Rab interacting protein
hg19_v2_chr15_+_59063478_59063561	0.131014	GUAACAG	ENST00000559228.1|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B 	ENST00000450403.2|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B
hg19_v2_chr3_-_149688896_149688970	0.13018	GUAACAG	ENST00000239940.7|PFN2|ENSG00000070087.9|profilin 2
hg19_v2_chr11_+_12695944_12695989	0.127967	GUAACAG	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr18_+_55102917_55102985	0.125745	GUAACAG	ENST00000491143.2|ONECUT2|ENSG00000119547.5|one cut homeobox 2
hg19_v2_chr14_-_74253948_74253964	0.122895	GUAACAG	ENST00000394071.2|ELMSAN1|ENSG00000156030.8|ELM2 and Myb/SANT-like domain containing 1
hg19_v2_chr3_-_113465065_113465147	0.122651	GUAACAG	ENST00000497255.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000478020.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000240922.3|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit 	ENST00000493900.1|NAA50|ENSG00000121579.8|N(alpha)-acetyltransferase 50, NatE catalytic subunit
hg19_v2_chr14_-_100070363_100070467	0.11899	GUAACAG	ENST00000380243.4|CCDC85C|ENSG00000205476.4|coiled-coil domain containing 85C
hg19_v2_chr1_-_52456352_52456436	0.116894	GUAACAG	ENST00000371655.3|RAB3B|ENSG00000169213.6|RAB3B, member RAS oncogene family
hg19_v2_chr1_+_93811438_93811548	0.116473	GUAACAG	ENST00000370272.4|DR1|ENSG00000117505.8|down-regulator of transcription 1, TBP-binding (negative cofactor 2) 	ENST00000370267.1|DR1|ENSG00000117505.8|down-regulator of transcription 1, TBP-binding (negative cofactor 2)
hg19_v2_chr1_-_221915418_221915518	0.108942	GUAACAG	ENST00000323825.3|DUSP10|ENSG00000143507.13|dual specificity phosphatase 10 	ENST00000366899.3|DUSP10|ENSG00000143507.13|dual specificity phosphatase 10
hg19_v2_chr17_+_38474489_38474548	0.106469	GUAACAG	ENST00000394089.2|RARA|ENSG00000131759.13|retinoic acid receptor, alpha 	ENST00000425707.3|RARA|ENSG00000131759.13|retinoic acid receptor, alpha
hg19_v2_chr16_-_31100284_31100284	0.104925	GUAACAG	ENST00000280606.6|PRSS53|ENSG00000151006.7|protease, serine, 53
hg19_v2_chr11_-_102962929_102962944	0.104459	GUAACAG	ENST00000260247.5|DCUN1D5|ENSG00000137692.7|DCN1, defective in cullin neddylation 1, domain containing 5
hg19_v2_chr8_-_28243934_28243993	0.103824	GUAACAG	ENST00000521185.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000520290.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000344423.5|ZNF395|ENSG00000186918.9|zinc finger protein 395
hg19_v2_chr9_-_124989804_124989865	0.102452	GUAACAG	ENST00000373755.2|LHX6|ENSG00000106852.11|LIM homeobox 6 	ENST00000373754.2|LHX6|ENSG00000106852.11|LIM homeobox 6
hg19_v2_chr19_+_41882598_41882689	0.100723	GUAACAG	ENST00000447302.2|TMEM91|ENSG00000142046.10|transmembrane protein 91 	ENST00000544232.1|TMEM91|ENSG00000142046.10|transmembrane protein 91 	ENST00000540732.1|CTC-435M10.3|ENSG00000255730.2|2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial; Uncharacterized protein  	ENST00000542945.1|TMEM91|ENSG00000142046.10|transmembrane protein 91
hg19_v2_chr16_+_86544113_86544145	0.100241	GUAACAG	ENST00000262426.4|FOXF1|ENSG00000103241.5|forkhead box F1
hg19_v2_chr3_-_72496035_72496069	0.0997704	GUAACAG	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr6_+_107811162_107811196	0.0972289	GUAACAG	ENST00000317357.5|SOBP|ENSG00000112320.7|sine oculis binding protein homolog (Drosophila)
hg19_v2_chr21_-_34960948_34961024	0.0950118	GUAACAG	ENST00000453626.1|DONSON|ENSG00000159147.13|downstream neighbor of SON 	ENST00000303113.6|DONSON|ENSG00000159147.13|downstream neighbor of SON 	ENST00000432378.1|DONSON|ENSG00000159147.13|downstream neighbor of SON 	ENST00000303071.5|DONSON|ENSG00000159147.13|downstream neighbor of SON
hg19_v2_chr3_+_9439400_9439414	0.0891157	GUAACAG	ENST00000450326.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402198.1|SETD5|ENSG00000168137.11|SET domain containing 5 	ENST00000402466.1|SETD5|ENSG00000168137.11|SET domain containing 5
hg19_v2_chr3_+_180630090_180630311	0.0817239	GUAACAG	ENST00000357559.4|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1 	ENST00000305586.7|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1
hg19_v2_chr4_+_128703295_128703496	0.0814845	GUAACAG	ENST00000296464.4|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like 	ENST00000508549.1|HSPA4L|ENSG00000164070.7|heat shock 70kDa protein 4-like
hg19_v2_chr1_+_82266053_82266082	0.0792864	GUAACAG	ENST00000370715.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370713.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000319517.6|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000370717.2|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000394879.1|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000271029.4|LPHN2|ENSG00000117114.15|latrophilin 2 	ENST00000335786.5|LPHN2|ENSG00000117114.15|latrophilin 2
hg19_v2_chr13_-_44361025_44361052	0.0780283	GUAACAG	ENST00000261488.6|ENOX1|ENSG00000120658.8|ecto-NOX disulfide-thiol exchanger 1
hg19_v2_chr4_+_87856129_87856186	0.0767736	GUAACAG	ENST00000395146.4|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1 	ENST00000507468.1|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1
hg19_v2_chr1_+_24645807_24645819	0.0762679	GUAACAG	ENST00000361548.4|GRHL3|ENSG00000158055.11|grainyhead-like 3 (Drosophila)
hg19_v2_chr3_-_71774516_71774587	0.0741679	GUAACAG	ENST00000425534.3|EIF4E3|ENSG00000163412.8|eukaryotic translation initiation factor 4E family member 3
hg19_v2_chr11_-_64901978_64902009	0.0725471	GUAACAG	ENST00000294256.8|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin 	ENST00000377190.3|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin
hg19_v2_chr7_-_558876_559046	0.0683445	GUAACAG	ENST00000354513.5|PDGFA|ENSG00000197461.9|platelet-derived growth factor alpha polypeptide 	ENST00000402802.3|PDGFA|ENSG00000197461.9|platelet-derived growth factor alpha polypeptide
hg19_v2_chr19_-_18632861_18632937	0.0679644	GUAACAG	ENST00000262809.4|ELL|ENSG00000105656.8|elongation factor RNA polymerase II
hg19_v2_chr9_+_108006880_108006943	0.0671781	GUAACAG	ENST00000374723.1|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1 	ENST00000374720.3|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1 	ENST00000374724.1|SLC44A1|ENSG00000070214.11|solute carrier family 44 (choline transporter), member 1
hg19_v2_chr4_+_145567173_145567296	0.0648719	GUAACAG	ENST00000296575.3|HHIP|ENSG00000164161.5|hedgehog interacting protein
hg19_v2_chr12_-_26278030_26278060	0.0646727	GUAACAG	ENST00000242728.4|BHLHE41|ENSG00000123095.5|basic helix-loop-helix family, member e41
hg19_v2_chr17_-_40833858_40833861	0.0645111	GUAACAG	ENST00000332438.4|CCR10|ENSG00000184451.5|chemokine (C-C motif) receptor 10
hg19_v2_chr10_+_102505468_102505546	0.0642187	GUAACAG	ENST00000361791.3|PAX2|ENSG00000075891.17|paired box 2 	ENST00000355243.3|PAX2|ENSG00000075891.17|paired box 2 	ENST00000428433.1|PAX2|ENSG00000075891.17|paired box 2 	ENST00000370296.2|PAX2|ENSG00000075891.17|paired box 2
hg19_v2_chr6_+_163835669_163835693	0.0609497	GUAACAG	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr9_-_37034028_37034157	0.0603372	GUAACAG	ENST00000520281.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000446742.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000522003.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000523145.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000414447.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000377847.2|PAX5|ENSG00000196092.8|paired box 5 	ENST00000377853.2|PAX5|ENSG00000196092.8|paired box 5 	ENST00000377852.2|PAX5|ENSG00000196092.8|paired box 5 	ENST00000523241.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000520154.1|PAX5|ENSG00000196092.8|paired box 5 	ENST00000358127.4|PAX5|ENSG00000196092.8|paired box 5
hg19_v2_chr1_-_243418344_243418356	0.0597887	GUAACAG	ENST00000366542.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr10_+_103986085_103986085	0.0597011	GUAACAG	ENST00000370005.3|ELOVL3|ENSG00000119915.4|ELOVL fatty acid elongase 3
hg19_v2_chr5_+_14664762_14664868	0.0596573	GUAACAG	ENST00000284274.4|FAM105B|ENSG00000154124.4|family with sequence similarity 105, member B
hg19_v2_chr3_-_57583130_57583152	0.0569694	GUAACAG	ENST00000303436.6|ARF4|ENSG00000168374.6|ADP-ribosylation factor 4
hg19_v2_chr14_-_57735528_57735726	0.0564355	GUAACAG	ENST00000340918.7|EXOC5|ENSG00000070367.11|exocyst complex component 5 	ENST00000413566.2|EXOC5|ENSG00000070367.11|exocyst complex component 5
hg19_v2_chrX_-_119694538_119694555	0.0539388	GUAACAG	ENST00000371322.5|CUL4B|ENSG00000158290.12|cullin 4B
hg19_v2_chr18_+_43753974_43754019	0.0520508	GUAACAG	ENST00000282059.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25 	ENST00000321319.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25
hg19_v2_chr12_-_121342170_121342183	0.0509654	GUAACAG	ENST00000353487.2|SPPL3|ENSG00000157837.11|signal peptide peptidase like 3
hg19_v2_chrX_+_119737806_119737835	0.0501038	GUAACAG	ENST00000371317.5|MCTS1|ENSG00000232119.3|malignant T cell amplified sequence 1
hg19_v2_chr12_-_54673871_54673925	0.0500346	GUAACAG	ENST00000209875.4|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr1_+_2985760_2985775	0.0487564	GUAACAG	ENST00000378391.2|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000514189.1|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000270722.5|PRDM16|ENSG00000142611.12|PR domain containing 16
hg19_v2_chr10_-_25012597_25012732	0.0481918	GUAACAG	ENST00000396432.2|ARHGAP21|ENSG00000107863.12|Rho GTPase activating protein 21
hg19_v2_chr19_+_34919257_34919332	0.0462417	GUAACAG	ENST00000246548.4|UBA2|ENSG00000126261.8|ubiquitin-like modifier activating enzyme 2 	ENST00000590048.2|UBA2|ENSG00000126261.8|ubiquitin-like modifier activating enzyme 2
hg19_v2_chr5_+_176560742_176560926	0.045982	GUAACAG	ENST00000439151.2|NSD1|ENSG00000165671.14|nuclear receptor binding SET domain protein 1
hg19_v2_chr11_+_101981169_101981210	0.0454881	GUAACAG	ENST00000526343.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000282441.5|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000537274.1|YAP1|ENSG00000137693.9|Yes-associated protein 1 	ENST00000345877.2|YAP1|ENSG00000137693.9|Yes-associated protein 1
hg19_v2_chrX_+_120181457_120181474	0.045041	GUAACAG	ENST00000328078.1|GLUD2|ENSG00000182890.3|glutamate dehydrogenase 2
hg19_v2_chr1_+_100503643_100503677	0.0445568	GUAACAG	ENST00000370152.3|HIAT1|ENSG00000156875.9|hippocampus abundant transcript 1
hg19_v2_chr3_+_14166440_14166541	0.0441761	GUAACAG	ENST00000306077.4|TMEM43|ENSG00000170876.7|transmembrane protein 43
hg19_v2_chr11_+_74660278_74660334	0.0433498	GUAACAG	ENST00000263672.6|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae) 	ENST00000530257.1|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae) 	ENST00000526361.1|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae) 	ENST00000532972.1|SPCS2|ENSG00000118363.7|signal peptidase complex subunit 2 homolog (S. cerevisiae)
hg19_v2_chr19_-_2151523_2151585	0.0430129	GUAACAG	ENST00000350812.6|AP3D1|ENSG00000065000.11|adaptor-related protein complex 3, delta 1 subunit 	ENST00000355272.6|AP3D1|ENSG00000065000.11|adaptor-related protein complex 3, delta 1 subunit 	ENST00000356926.4|AP3D1|ENSG00000065000.11|adaptor-related protein complex 3, delta 1 subunit 	ENST00000345016.5|AP3D1|ENSG00000065000.11|adaptor-related protein complex 3, delta 1 subunit
hg19_v2_chr18_+_19321281_19321334	0.0421971	GUAACAG	ENST00000261537.6|MIB1|ENSG00000101752.7|mindbomb E3 ubiquitin protein ligase 1
hg19_v2_chr12_+_123868320_123868320	0.0411741	GUAACAG	ENST00000402868.3|SETD8|ENSG00000183955.8|SET domain containing (lysine methyltransferase) 8 	ENST00000330479.4|SETD8|ENSG00000183955.8|SET domain containing (lysine methyltransferase) 8
hg19_v2_chr20_-_60640866_60640901	0.0410729	GUAACAG	ENST00000252996.4|TAF4|ENSG00000130699.12|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
hg19_v2_chr3_+_147127142_147127171	0.040153	GUAACAG	ENST00000282928.4|ZIC1|ENSG00000152977.5|Zic family member 1
hg19_v2_chr8_-_125384927_125384952	0.0397631	GUAACAG	ENST00000297632.6|TMEM65|ENSG00000164983.6|transmembrane protein 65
hg19_v2_chr17_-_40428359_40428462	0.0392848	GUAACAG	ENST00000293328.3|STAT5B|ENSG00000173757.5|signal transducer and activator of transcription 5B
hg19_v2_chr13_+_28813645_28813770	0.0386824	GUAACAG	ENST00000282391.5|PAN3|ENSG00000152520.9|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr20_-_56284816_56284958	0.0371302	GUAACAG	ENST00000395819.3|PMEPA1|ENSG00000124225.11|prostate transmembrane protein, androgen induced 1 	ENST00000341744.3|PMEPA1|ENSG00000124225.11|prostate transmembrane protein, androgen induced 1
hg19_v2_chr16_+_12070567_12070623	0.0369628	GUAACAG	ENST00000566228.1|SNX29|ENSG00000048471.9|sorting nexin 29
hg19_v2_chrX_-_41782249_41782287	0.0362685	GUAACAG	ENST00000442742.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000421587.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000378166.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000318588.9|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000361962.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v2_chr14_-_39639523_39639617	0.0360831	GUAACAG	ENST00000330149.5|TRAPPC6B|ENSG00000182400.10|trafficking protein particle complex 6B 	ENST00000554018.1|TRAPPC6B|ENSG00000182400.10|trafficking protein particle complex 6B 	ENST00000347691.5|TRAPPC6B|ENSG00000182400.10|trafficking protein particle complex 6B
hg19_v2_chr8_+_77593448_77593471	0.0360257	GUAACAG	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr13_-_107187462_107187462	0.0336091	GUAACAG	ENST00000245323.4|EFNB2|ENSG00000125266.6|ephrin-B2
hg19_v2_chr2_+_85198216_85198305	0.0332063	GUAACAG	ENST00000456682.1|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1 	ENST00000409785.4|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1
hg19_v2_chrX_+_152907913_152907988	0.0326402	GUAACAG	ENST00000370167.4|DUSP9|ENSG00000130829.13|dual specificity phosphatase 9
hg19_v2_chr16_+_22825475_22825498	0.032383	GUAACAG	ENST00000261374.3|HS3ST2|ENSG00000122254.6|heparan sulfate (glucosamine) 3-O-sulfotransferase 2
hg19_v2_chr9_+_95087766_95087950	0.0323185	GUAACAG	ENST00000375587.3|CENPP|ENSG00000188312.9|centromere protein P
hg19_v2_chr13_+_42622781_42622889	0.0308578	GUAACAG	ENST00000337343.4|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000261491.5|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta 	ENST00000379274.2|DGKH|ENSG00000102780.12|diacylglycerol kinase, eta
hg19_v2_chr1_-_93645818_93645918	0.0301423	GUAACAG	ENST00000370280.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5 	ENST00000479918.1|TMED5|ENSG00000117500.8|transmembrane emp24 protein transport domain containing 5
hg19_v2_chr5_-_172198190_172198206	0.0300806	GUAACAG	ENST00000239223.3|DUSP1|ENSG00000120129.5|dual specificity phosphatase 1
hg19_v2_chr12_-_31744031_31744059	0.0286293	GUAACAG	ENST00000389082.5|DENND5B|ENSG00000170456.10|DENN/MADD domain containing 5B
hg19_v2_chr7_-_26578407_26578451	0.0281058	GUAACAG	ENST00000242109.3|KIAA0087|ENSG00000122548.3|KIAA0087
hg19_v2_chr1_-_226924980_226925159	0.0279961	GUAACAG	ENST00000272117.3|ITPKB|ENSG00000143772.5|inositol-trisphosphate 3-kinase B
hg19_v2_chr7_+_138916231_138916231	0.0277036	GUAACAG	ENST00000473989.3|UBN2|ENSG00000157741.10|ubinuclein 2 	ENST00000288561.8|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr1_+_52521928_52521948	0.0275502	GUAACAG	ENST00000489308.2|BTF3L4|ENSG00000134717.13|basic transcription factor 3-like 4
hg19_v2_chr5_-_59189545_59189625	0.0254115	GUAACAG	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr14_+_39735411_39735502	0.023879	GUAACAG	ENST00000603904.1|RP11-407N17.3|ENSG00000258941.2|cTAGE family member 5 isoform 4
hg19_v2_chr2_-_25475120_25475180	0.0232616	GUAACAG	ENST00000380746.4|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha 	ENST00000402667.1|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha
hg19_v2_chr3_+_37493610_37493651	0.0232187	GUAACAG	ENST00000264741.5|ITGA9|ENSG00000144668.7|integrin, alpha 9
hg19_v2_chr3_-_122233723_122233797	0.0227183	GUAACAG	ENST00000493510.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000344337.6|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000476916.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5) 	ENST00000465882.1|KPNA1|ENSG00000114030.8|karyopherin alpha 1 (importin alpha 5)
hg19_v2_chr4_+_39699664_39699772	0.0207423	GUAACAG	ENST00000261427.5|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000510934.1|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K 	ENST00000295963.6|UBE2K|ENSG00000078140.9|ubiquitin-conjugating enzyme E2K
hg19_v2_chr20_-_524455_524466	0.0203162	GUAACAG	ENST00000349736.5|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide 	ENST00000217244.3|CSNK2A1|ENSG00000101266.12|casein kinase 2, alpha 1 polypeptide
hg19_v2_chr11_-_36531774_36531858	0.0202822	GUAACAG	ENST00000348124.5|TRAF6|ENSG00000175104.10|TNF receptor-associated factor 6, E3 ubiquitin protein ligase 	ENST00000526995.1|TRAF6|ENSG00000175104.10|TNF receptor-associated factor 6, E3 ubiquitin protein ligase
hg19_v2_chr15_+_64443905_64443943	0.0194916	GUAACAG	ENST00000325881.4|SNX22|ENSG00000157734.9|sorting nexin 22
hg19_v2_chr3_+_196466710_196466824	0.0182699	GUAACAG	ENST00000327134.3|PAK2|ENSG00000180370.6|p21 protein (Cdc42/Rac)-activated kinase 2
hg19_v2_chr10_+_105726862_105726986	0.0172301	GUAACAG	ENST00000335753.4|SLK|ENSG00000065613.9|STE20-like kinase 	ENST00000369755.3|SLK|ENSG00000065613.9|STE20-like kinase
hg19_v2_chr14_+_39736299_39736412	0.0155588	GUAACAG	ENST00000341502.5|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000396158.2|CTAGE5|ENSG00000150527.12|CTAGE family, member 5 	ENST00000280083.3|CTAGE5|ENSG00000150527.12|CTAGE family, member 5
hg19_v2_chr15_+_77712993_77713081	0.0138911	GUAACAG	ENST00000336216.4|HMG20A|ENSG00000140382.10|high mobility group 20A 	ENST00000381714.3|HMG20A|ENSG00000140382.10|high mobility group 20A 	ENST00000558651.1|HMG20A|ENSG00000140382.10|high mobility group 20A
hg19_v2_chr20_+_36661910_36661968	0.0127531	GUAACAG	ENST00000373433.4|RPRD1B|ENSG00000101413.7|regulation of nuclear pre-mRNA domain containing 1B
hg19_v2_chr4_-_57301748_57301791	0.0125829	GUAACAG	ENST00000264220.2|PPAT|ENSG00000128059.4|phosphoribosyl pyrophosphate amidotransferase
hg19_v2_chr17_-_36956155_36956223	0.0122857	GUAACAG	ENST00000269554.3|PIP4K2B|ENSG00000141720.7|phosphatidylinositol-5-phosphate 4-kinase, type II, beta
hg19_v2_chr22_+_41347363_41347399	0.0118725	GUAACAG	ENST00000216225.8|RBX1|ENSG00000100387.8|ring-box 1, E3 ubiquitin protein ligase
hg19_v2_chr14_+_57046500_57046529	0.0110655	GUAACAG	ENST00000261556.6|TMEM260|ENSG00000070269.9|transmembrane protein 260
hg19_v2_chr4_-_153457197_153457268	0.0105638	GUAACAG	ENST00000281708.4|FBXW7|ENSG00000109670.9|F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
hg19_v2_chr14_-_77843390_77843462	0.0105152	GUAACAG	ENST00000216468.7|TMED8|ENSG00000100580.7|transmembrane emp24 protein transport domain containing 8
hg19_v2_chr11_-_132813566_132813624	0.00999627	GUAACAG	ENST00000331898.7|OPCML|ENSG00000183715.9|opioid binding protein/cell adhesion molecule-like
hg19_v2_chr16_-_58768177_58768264	0.00994842	GUAACAG	ENST00000434819.2|GOT2|ENSG00000125166.8|glutamic-oxaloacetic transaminase 2, mitochondrial 	ENST00000245206.5|GOT2|ENSG00000125166.8|glutamic-oxaloacetic transaminase 2, mitochondrial
hg19_v2_chr5_+_177019159_177019213	0.00993132	GUAACAG	ENST00000332598.6|TMED9|ENSG00000184840.7|transmembrane emp24 protein transport domain containing 9
hg19_v2_chr19_-_14606900_14606955	0.00925069	GUAACAG	ENST00000393029.3|GIPC1|ENSG00000123159.11|GIPC PDZ domain containing family, member 1 	ENST00000393028.1|GIPC1|ENSG00000123159.11|GIPC PDZ domain containing family, member 1 	ENST00000393033.4|GIPC1|ENSG00000123159.11|GIPC PDZ domain containing family, member 1 	ENST00000345425.2|GIPC1|ENSG00000123159.11|GIPC PDZ domain containing family, member 1 	ENST00000586027.1|GIPC1|ENSG00000123159.11|GIPC PDZ domain containing family, member 1 	ENST00000591349.1|GIPC1|ENSG00000123159.11|GIPC PDZ domain containing family, member 1 	ENST00000587210.1|GIPC1|ENSG00000123159.11|GIPC PDZ domain containing family, member 1
hg19_v2_chr3_-_116164306_116164380	0.00896197	GUAACAG	ENST00000490035.2|LSAMP|ENSG00000185565.7|limbic system-associated membrane protein
hg19_v2_chr1_-_11120057_11120135	0.00872109	GUAACAG	ENST00000376957.2|SRM|ENSG00000116649.5|spermidine synthase
hg19_v2_chr4_+_52709229_52709345	0.00855447	GUAACAG	ENST00000334635.5|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381441.3|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4 	ENST00000381437.4|DCUN1D4|ENSG00000109184.10|DCN1, defective in cullin neddylation 1, domain containing 4
hg19_v2_chr10_+_116581503_116581570	0.00743982	GUAACAG	ENST00000369248.4|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1 	ENST00000369250.3|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1 	ENST00000369246.1|FAM160B1|ENSG00000151553.10|family with sequence similarity 160, member B1
hg19_v2_chr8_+_58907104_58907131	0.00732104	GUAACAG	ENST00000361488.3|FAM110B|ENSG00000169122.7|family with sequence similarity 110, member B
hg19_v2_chr5_+_138678131_138678169	0.0064873	GUAACAG	ENST00000394795.2|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2 	ENST00000510080.1|PAIP2|ENSG00000120727.8|poly(A) binding protein interacting protein 2
hg19_v2_chr3_+_38495333_38495422	0.00637885	GUAACAG	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr10_+_114709999_114710031	0.00514699	GUAACAG	ENST00000355995.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000545257.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000543371.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000536810.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000355717.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000538897.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000534894.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v2_chr10_-_88281494_88281572	0.00483291	GUAACAG	ENST00000298767.5|WAPAL|ENSG00000062650.13|wings apart-like homolog (Drosophila)
hg19_v2_chr5_-_41510656_41510713	0.00250763	GUAACAG	ENST00000377801.3|PLCXD3|ENSG00000182836.5|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v2_chr15_+_64388166_64388225	0.00224434	GUAACAG	ENST00000353874.4|SNX1|ENSG00000028528.10|sorting nexin 1 	ENST00000261889.5|SNX1|ENSG00000028528.10|sorting nexin 1 	ENST00000559844.1|SNX1|ENSG00000028528.10|sorting nexin 1 	ENST00000561026.1|SNX1|ENSG00000028528.10|sorting nexin 1 	ENST00000558040.1|SNX1|ENSG00000028528.10|sorting nexin 1
hg19_v2_chr2_-_68479614_68479685	0.00166908	GUAACAG	ENST00000234310.3|PPP3R1|ENSG00000221823.6|protein phosphatase 3, regulatory subunit B, alpha
hg19_v2_chr6_-_62996066_62996137	0.00111453	GUAACAG	ENST00000281156.4|KHDRBS2|ENSG00000112232.8|KH domain containing, RNA binding, signal transduction associated 2
hg19_v2_chr12_-_6716534_6716557	0.000869029	GUAACAG	ENST00000544484.1|CHD4|ENSG00000111642.10|chromodomain helicase DNA binding protein 4 	ENST00000309577.6|CHD4|ENSG00000111642.10|chromodomain helicase DNA binding protein 4 	ENST00000357008.2|CHD4|ENSG00000111642.10|chromodomain helicase DNA binding protein 4
