hg19_v2_chr22_+_31488433_31488454	1.27538	GLI2	ENST00000455608.1|SMTN|ENSG00000183963.14|smoothelin
hg19_v2_chr19_-_51472031_51472047	1.27094	GLI2	ENST00000391808.1|KLK6|ENSG00000167755.9|kallikrein-related peptidase 6
hg19_v2_chr1_-_153433120_153433177	1.04148	GLI2	ENST00000368723.3|S100A7|ENSG00000143556.4|S100 calcium binding protein A7
hg19_v2_chr22_+_31489344_31489371	1.03187	GLI2	ENST00000404574.1|SMTN|ENSG00000183963.14|smoothelin
hg19_v2_chr1_-_153066998_153067008	0.873162	GLI2	ENST00000368750.3|SPRR2E|ENSG00000203785.4|small proline-rich protein 2E
hg19_v2_chr1_+_150522222_150522315	0.834747	GLI2	ENST00000369039.5|ADAMTSL4|ENSG00000143382.9|ADAMTS-like 4
hg19_v2_chr20_+_3776371_3776506	0.815293	GLI2	ENST00000245960.5|CDC25B|ENSG00000101224.13|cell division cycle 25B
hg19_v2_chr1_-_153013588_153013605	0.80313	GLI2	ENST00000360379.3|SPRR2D|ENSG00000163216.6|small proline-rich protein 2D
hg19_v2_chr20_+_62327996_62328021	0.789568	GLI2	ENST00000369996.1|TNFRSF6B|ENSG00000243509.4|tumor necrosis factor receptor superfamily, member 6b, decoy
hg19_v2_chr12_-_57634475_57634532	0.761458	GLI2	ENST00000393825.1|NDUFA4L2|ENSG00000185633.6|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2
hg19_v2_chr18_+_21529811_21529857	0.73117	GLI2	ENST00000588004.1|LAMA3|ENSG00000053747.11|laminin, alpha 3
hg19_v2_chr4_-_57524061_57524074	0.71788	GLI2	ENST00000508121.1|HOPX|ENSG00000171476.17|HOP homeobox
hg19_v2_chr2_-_169746878_169746970	0.711271	GLI2	ENST00000282074.2|SPC25|ENSG00000152253.4|SPC25, NDC80 kinetochore complex component
hg19_v2_chr12_+_4671352_4671390	0.69734	GLI2	ENST00000542744.1|DYRK4|ENSG00000010219.9|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4
hg19_v2_chr8_-_42065187_42065242	0.679626	GLI2	ENST00000270189.6|PLAT|ENSG00000104368.13|plasminogen activator, tissue 	ENST00000352041.3|PLAT|ENSG00000104368.13|plasminogen activator, tissue 	ENST00000220809.4|PLAT|ENSG00000104368.13|plasminogen activator, tissue
hg19_v2_chr7_-_92465868_92465922	0.650459	GLI2	ENST00000424848.2|CDK6|ENSG00000105810.5|cyclin-dependent kinase 6
hg19_v2_chr13_-_60738003_60738121	0.635956	GLI2	ENST00000400330.1|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3 	ENST00000400324.4|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3
hg19_v2_chr1_+_152486950_152486978	0.614028	GLI2	ENST00000368790.3|CRCT1|ENSG00000169509.5|cysteine-rich C-terminal 1
hg19_v2_chr13_-_60737898_60737910	0.607215	GLI2	ENST00000377908.2|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3 	ENST00000400319.1|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3 	ENST00000400320.1|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3 	ENST00000267215.4|DIAPH3|ENSG00000139734.13|diaphanous-related formin 3
hg19_v2_chr12_-_125348448_125348472	0.601178	GLI2	ENST00000339570.5|SCARB1|ENSG00000073060.11|scavenger receptor class B, member 1
hg19_v2_chr7_+_130131907_130131947	0.601028	GLI2	ENST00000223215.4|MEST|ENSG00000106484.10|mesoderm specific transcript 	ENST00000437945.1|MEST|ENSG00000106484.10|mesoderm specific transcript
hg19_v2_chr20_+_3776936_3776964	0.59734	GLI2	ENST00000439880.2|CDC25B|ENSG00000101224.13|cell division cycle 25B
hg19_v2_chr17_+_39261584_39261584	0.586605	GLI2	ENST00000391415.1|KRTAP4-9|ENSG00000212722.6|keratin associated protein 4-9
hg19_v2_chr6_+_26240561_26240628	0.576869	GLI2	ENST00000377745.2|HIST1H4F|ENSG00000198327.3|histone cluster 1, H4f
hg19_v2_chr19_+_2249308_2249326	0.574907	GLI2	ENST00000592877.1|AMH|ENSG00000104899.4|anti-Mullerian hormone 	ENST00000221496.4|AMH|ENSG00000104899.4|anti-Mullerian hormone
hg19_v2_chr8_+_31497271_31497285	0.542085	GLI2	ENST00000520407.1|NRG1|ENSG00000157168.14|neuregulin 1
hg19_v2_chrX_+_17755563_17755618	0.524124	GLI2	ENST00000380045.3|SCML1|ENSG00000047634.10|sex comb on midleg-like 1 (Drosophila) 	ENST00000380041.3|SCML1|ENSG00000047634.10|sex comb on midleg-like 1 (Drosophila) 	ENST00000380043.3|SCML1|ENSG00000047634.10|sex comb on midleg-like 1 (Drosophila) 	ENST00000398080.1|SCML1|ENSG00000047634.10|sex comb on midleg-like 1 (Drosophila)
hg19_v2_chr11_-_71159380_71159449	0.515936	GLI2	ENST00000525346.1|DHCR7|ENSG00000172893.11|7-dehydrocholesterol reductase 	ENST00000531364.1|DHCR7|ENSG00000172893.11|7-dehydrocholesterol reductase 	ENST00000529990.1|DHCR7|ENSG00000172893.11|7-dehydrocholesterol reductase 	ENST00000527316.1|DHCR7|ENSG00000172893.11|7-dehydrocholesterol reductase 	ENST00000407721.2|DHCR7|ENSG00000172893.11|7-dehydrocholesterol reductase
hg19_v2_chr17_+_6544356_6544363	0.499394	GLI2	ENST00000574838.1|TXNDC17|ENSG00000129235.6|thioredoxin domain containing 17
hg19_v2_chr12_-_2986107_2986258	0.49924	GLI2	ENST00000359843.3|FOXM1|ENSG00000111206.8|forkhead box M1 	ENST00000342628.2|FOXM1|ENSG00000111206.8|forkhead box M1 	ENST00000361953.3|FOXM1|ENSG00000111206.8|forkhead box M1
hg19_v2_chr19_+_45417812_45417869	0.497159	GLI2	ENST00000592535.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr18_-_59274139_59274190	0.496997	GLI2	ENST00000586949.1|RP11-879F14.2|ENSG00000267279.1|RP11-879F14.2
hg19_v2_chr19_+_45418067_45418126	0.471579	GLI2	ENST00000589078.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000586638.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr1_-_26232951_26232959	0.469252	GLI2	ENST00000426559.2|STMN1|ENSG00000117632.16|stathmin 1 	ENST00000455785.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr19_-_44285401_44285446	0.457766	GLI2	ENST00000262888.3|KCNN4|ENSG00000104783.7|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4
hg19_v2_chr5_+_126112794_126112928	0.449949	GLI2	ENST00000261366.5|LMNB1|ENSG00000113368.7|lamin B1 	ENST00000395354.1|LMNB1|ENSG00000113368.7|lamin B1
hg19_v2_chr17_-_34122596_34122711	0.444897	GLI2	ENST00000250144.8|MMP28|ENSG00000129270.11|matrix metallopeptidase 28
hg19_v2_chr20_+_42295745_42295797	0.440805	GLI2	ENST00000396863.4|MYBL2|ENSG00000101057.11|v-myb avian myeloblastosis viral oncogene homolog-like 2 	ENST00000217026.4|MYBL2|ENSG00000101057.11|v-myb avian myeloblastosis viral oncogene homolog-like 2
hg19_v2_chr19_+_45417921_45417970	0.419295	GLI2	ENST00000252491.4|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000592885.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000589781.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr11_-_119187826_119187847	0.419124	GLI2	ENST00000264036.4|MCAM|ENSG00000076706.10|melanoma cell adhesion molecule
hg19_v2_chr11_-_19262486_19262512	0.41884	GLI2	ENST00000250024.4|E2F8|ENSG00000129173.8|E2F transcription factor 8
hg19_v2_chr19_+_45417504_45417589	0.418294	GLI2	ENST00000588750.1|APOC1|ENSG00000130208.5|apolipoprotein C-I 	ENST00000588802.1|APOC1|ENSG00000130208.5|apolipoprotein C-I
hg19_v2_chr5_-_176924562_176924611	0.41748	GLI2	ENST00000359895.2|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma) 	ENST00000355572.2|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma) 	ENST00000355841.2|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma) 	ENST00000393551.1|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma) 	ENST00000505074.1|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma) 	ENST00000356618.4|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma) 	ENST00000393546.4|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma)
hg19_v2_chr2_+_65215604_65215625	0.416422	GLI2	ENST00000531327.1|SLC1A4|ENSG00000115902.6|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
hg19_v2_chrX_+_64887512_64887537	0.41521	GLI2	ENST00000360270.5|MSN|ENSG00000147065.12|moesin
hg19_v2_chr17_+_6544328_6544342	0.415055	GLI2	ENST00000570330.1|TXNDC17|ENSG00000129235.6|thioredoxin domain containing 17
hg19_v2_chr3_+_127317066_127317066	0.406717	GLI2	ENST00000265056.7|MCM2|ENSG00000073111.9|minichromosome maintenance complex component 2
hg19_v2_chr21_-_45079341_45079400	0.405145	GLI2	ENST00000443485.1|HSF2BP|ENSG00000160207.4|heat shock transcription factor 2 binding protein 	ENST00000291560.2|HSF2BP|ENSG00000160207.4|heat shock transcription factor 2 binding protein
hg19_v2_chr14_+_74417192_74417227	0.396803	GLI2	ENST00000554320.1|COQ6|ENSG00000119723.11|coenzyme Q6 monooxygenase
hg19_v2_chr6_+_31371337_31371449	0.395205	GLI2	ENST00000449934.2|MICA|ENSG00000204520.8|MHC class I polypeptide-related sequence A 	ENST00000421350.1|MICA|ENSG00000204520.8|MHC class I polypeptide-related sequence A
hg19_v2_chr12_-_125348329_125348419	0.385097	GLI2	ENST00000546215.1|SCARB1|ENSG00000073060.11|scavenger receptor class B, member 1 	ENST00000415380.2|SCARB1|ENSG00000073060.11|scavenger receptor class B, member 1 	ENST00000261693.6|SCARB1|ENSG00000073060.11|scavenger receptor class B, member 1 	ENST00000376788.1|SCARB1|ENSG00000073060.11|scavenger receptor class B, member 1 	ENST00000545493.1|SCARB1|ENSG00000073060.11|scavenger receptor class B, member 1
hg19_v2_chr20_-_23969416_23969416	0.384381	GLI2	ENST00000335694.4|GGTLC1|ENSG00000149435.8|gamma-glutamyltransferase light chain 1
hg19_v2_chr6_-_32784687_32784839	0.382875	GLI2	ENST00000447394.1|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta 	ENST00000438763.2|HLA-DOB|ENSG00000241106.2|major histocompatibility complex, class II, DO beta
hg19_v2_chr15_-_78933567_78933604	0.375284	GLI2	ENST00000261751.3|CHRNB4|ENSG00000117971.7|cholinergic receptor, nicotinic, beta 4 (neuronal) 	ENST00000412074.2|CHRNB4|ENSG00000117971.7|cholinergic receptor, nicotinic, beta 4 (neuronal)
hg19_v2_chr1_+_70876891_70876917	0.369255	GLI2	ENST00000411986.2|CTH|ENSG00000116761.7|cystathionase (cystathionine gamma-lyase)
hg19_v2_chr19_-_49015050_49015111	0.366728	GLI2	ENST00000600059.1|LMTK3|ENSG00000142235.4|lemur tyrosine kinase 3
hg19_v2_chr17_-_3819751_3819794	0.366008	GLI2	ENST00000225538.3|P2RX1|ENSG00000108405.3|purinergic receptor P2X, ligand-gated ion channel, 1
hg19_v2_chr2_+_48541776_48541874	0.365726	GLI2	ENST00000413569.1|FOXN2|ENSG00000170802.11|forkhead box N2 	ENST00000340553.3|FOXN2|ENSG00000170802.11|forkhead box N2
hg19_v2_chr17_+_6544078_6544125	0.364867	GLI2	ENST00000250101.5|TXNDC17|ENSG00000129235.6|thioredoxin domain containing 17
hg19_v2_chr1_+_153388993_153389000	0.358178	GLI2	ENST00000368729.4|S100A7A|ENSG00000184330.7|S100 calcium binding protein A7A
hg19_v2_chr11_+_13690249_13690274	0.354664	GLI2	ENST00000532701.1|FAR1|ENSG00000197601.8|fatty acyl CoA reductase 1
hg19_v2_chr19_-_40791211_40791269	0.348827	GLI2	ENST00000579047.1|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2
hg19_v2_chr2_-_224702201_224702256	0.346064	GLI2	ENST00000446015.2|AP1S3|ENSG00000152056.12|adaptor-related protein complex 1, sigma 3 subunit
hg19_v2_chr16_-_84538218_84538364	0.345471	GLI2	ENST00000562447.1|TLDC1|ENSG00000140950.11|TBC/LysM-associated domain containing 1 	ENST00000565765.1|TLDC1|ENSG00000140950.11|TBC/LysM-associated domain containing 1 	ENST00000535580.1|TLDC1|ENSG00000140950.11|TBC/LysM-associated domain containing 1 	ENST00000343629.6|TLDC1|ENSG00000140950.11|TBC/LysM-associated domain containing 1
hg19_v2_chr14_+_85996471_85996497	0.343833	GLI2	ENST00000330753.4|FLRT2|ENSG00000185070.6|fibronectin leucine rich transmembrane protein 2
hg19_v2_chr1_-_6420737_6420779	0.339641	GLI2	ENST00000541130.1|ACOT7|ENSG00000097021.15|acyl-CoA thioesterase 7 	ENST00000377845.3|ACOT7|ENSG00000097021.15|acyl-CoA thioesterase 7
hg19_v2_chr7_-_23053719_23053767	0.339102	GLI2	ENST00000432176.2|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A 	ENST00000440481.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A
hg19_v2_chr19_+_48824711_48824766	0.33631	GLI2	ENST00000599704.1|EMP3|ENSG00000142227.6|epithelial membrane protein 3
hg19_v2_chr19_+_48828582_48828637	0.334512	GLI2	ENST00000270221.6|EMP3|ENSG00000142227.6|epithelial membrane protein 3 	ENST00000596315.1|EMP3|ENSG00000142227.6|epithelial membrane protein 3
hg19_v2_chr1_-_11115877_11115914	0.332789	GLI2	ENST00000490101.1|SRM|ENSG00000116649.5|spermidine synthase
hg19_v2_chr3_-_179169330_179169384	0.332579	GLI2	ENST00000232564.3|GNB4|ENSG00000114450.5|guanine nucleotide binding protein (G protein), beta polypeptide 4
hg19_v2_chr11_-_57103327_57103372	0.331543	GLI2	ENST00000529002.1|SSRP1|ENSG00000149136.3|structure specific recognition protein 1 	ENST00000278412.2|SSRP1|ENSG00000149136.3|structure specific recognition protein 1
hg19_v2_chr22_+_37447771_37447916	0.331211	GLI2	ENST00000402077.3|KCTD17|ENSG00000100379.13|potassium channel tetramerization domain containing 17 	ENST00000403888.3|KCTD17|ENSG00000100379.13|potassium channel tetramerization domain containing 17 	ENST00000456470.1|KCTD17|ENSG00000100379.13|potassium channel tetramerization domain containing 17
hg19_v2_chr6_+_43739697_43739752	0.330665	GLI2	ENST00000230480.6|VEGFA|ENSG00000112715.16|vascular endothelial growth factor A
hg19_v2_chr3_-_50336548_50336742	0.330217	GLI2	ENST00000450489.1|NAT6|ENSG00000243477.1|N-acetyltransferase 6 (GCN5-related) 	ENST00000513170.1|HYAL3|ENSG00000186792.11|hyaluronoglucosaminidase 3 	ENST00000450982.1|HYAL3|ENSG00000186792.11|hyaluronoglucosaminidase 3
hg19_v2_chr11_+_124609823_124609941	0.328371	GLI2	ENST00000412681.2|NRGN|ENSG00000154146.8|neurogranin (protein kinase C substrate, RC3)
hg19_v2_chr5_+_131409476_131409492	0.324451	GLI2	ENST00000296871.2|CSF2|ENSG00000164400.4|colony stimulating factor 2 (granulocyte-macrophage)
hg19_v2_chr8_-_145013711_145013786	0.324327	GLI2	ENST00000345136.3|PLEC|ENSG00000178209.10|plectin
hg19_v2_chr22_+_50528459_50528516	0.321986	GLI2	ENST00000395858.3|MOV10L1|ENSG00000073146.11|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse) 	ENST00000395843.1|MOV10L1|ENSG00000073146.11|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)
hg19_v2_chr20_+_814349_814375	0.321657	GLI2	ENST00000381941.3|FAM110A|ENSG00000125898.8|family with sequence similarity 110, member A
hg19_v2_chr7_-_73668692_73668774	0.320007	GLI2	ENST00000352131.3|RFC2|ENSG00000049541.6|replication factor C (activator 1) 2, 40kDa 	ENST00000055077.3|RFC2|ENSG00000049541.6|replication factor C (activator 1) 2, 40kDa
hg19_v2_chr1_+_165796753_165796776	0.318748	GLI2	ENST00000367879.4|UCK2|ENSG00000143179.8|uridine-cytidine kinase 2
hg19_v2_chr19_+_17858509_17858529	0.317234	GLI2	ENST00000594202.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000252771.7|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000389133.4|FCHO1|ENSG00000130475.10|FCH domain only 1
hg19_v2_chr1_-_26233423_26233482	0.316869	GLI2	ENST00000357865.2|STMN1|ENSG00000117632.16|stathmin 1
hg19_v2_chr10_+_124030819_124030827	0.315151	GLI2	ENST00000260723.4|BTBD16|ENSG00000138152.7|BTB (POZ) domain containing 16 	ENST00000368994.2|BTBD16|ENSG00000138152.7|BTB (POZ) domain containing 16
hg19_v2_chr1_+_22964073_22964132	0.314501	GLI2	ENST00000402322.1|C1QA|ENSG00000173372.12|complement component 1, q subcomponent, A chain
hg19_v2_chr20_-_32891151_32891168	0.310815	GLI2	ENST00000217426.2|AHCY|ENSG00000101444.8|adenosylhomocysteinase
hg19_v2_chr18_+_12948000_12948057	0.31057	GLI2	ENST00000585730.1|SEH1L|ENSG00000085415.11|SEH1-like (S. cerevisiae) 	ENST00000399892.2|SEH1L|ENSG00000085415.11|SEH1-like (S. cerevisiae) 	ENST00000589446.1|SEH1L|ENSG00000085415.11|SEH1-like (S. cerevisiae) 	ENST00000587761.1|SEH1L|ENSG00000085415.11|SEH1-like (S. cerevisiae)
hg19_v2_chr8_-_145331153_145331153	0.309562	GLI2	ENST00000377412.4|KM-PA-2|ENSG00000204775.4|KM-PA-2 protein; Uncharacterized protein
hg19_v2_chr16_+_30064444_30064528	0.307867	GLI2	ENST00000395248.1|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate 	ENST00000566897.1|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate 	ENST00000568435.1|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate
hg19_v2_chr19_-_49522727_49522759	0.305035	GLI2	ENST00000600007.1|CTB-60B18.10|ENSG00000268655.1|CTB-60B18.10
hg19_v2_chr7_-_151511911_151511962	0.304603	GLI2	ENST00000392801.2|PRKAG2|ENSG00000106617.9|protein kinase, AMP-activated, gamma 2 non-catalytic subunit
hg19_v2_chr2_-_224702740_224702761	0.295301	GLI2	ENST00000444408.1|AP1S3|ENSG00000152056.12|adaptor-related protein complex 1, sigma 3 subunit
hg19_v2_chr5_+_89770664_89770688	0.294164	GLI2	ENST00000503973.1|POLR3G|ENSG00000113356.6|polymerase (RNA) III (DNA directed) polypeptide G (32kD) 	ENST00000399107.1|POLR3G|ENSG00000113356.6|polymerase (RNA) III (DNA directed) polypeptide G (32kD)
hg19_v2_chr19_+_39904168_39904468	0.293941	GLI2	ENST00000438123.1|PLEKHG2|ENSG00000090924.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 2 	ENST00000409797.2|PLEKHG2|ENSG00000090924.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 2 	ENST00000451354.2|PLEKHG2|ENSG00000090924.10|pleckstrin homology domain containing, family G (with RhoGef domain) member 2
hg19_v2_chr1_-_155948218_155948289	0.292432	GLI2	ENST00000313667.4|ARHGEF2|ENSG00000116584.13|Rho/Rac guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr15_+_67430339_67430366	0.291291	GLI2	ENST00000439724.3|SMAD3|ENSG00000166949.11|SMAD family member 3
hg19_v2_chr17_+_79213039_79213106	0.291025	GLI2	ENST00000431388.2|C17orf89|ENSG00000224877.3|chromosome 17 open reading frame 89
hg19_v2_chr1_+_161195781_161195795	0.289159	GLI2	ENST00000367988.3|TOMM40L|ENSG00000158882.8|translocase of outer mitochondrial membrane 40 homolog (yeast)-like
hg19_v2_chr20_+_23168759_23168765	0.28847	GLI2	ENST00000411595.1|RP4-737E23.2|ENSG00000230387.1|RP4-737E23.2
hg19_v2_chr7_-_128045984_128046026	0.287032	GLI2	ENST00000470772.1|IMPDH1|ENSG00000106348.12|IMP (inosine 5'-monophosphate) dehydrogenase 1 	ENST00000480861.1|IMPDH1|ENSG00000106348.12|IMP (inosine 5'-monophosphate) dehydrogenase 1 	ENST00000496200.1|IMPDH1|ENSG00000106348.12|IMP (inosine 5'-monophosphate) dehydrogenase 1
hg19_v2_chr9_-_136242909_136242953	0.285732	GLI2	ENST00000371991.3|SURF4|ENSG00000148248.9|surfeit 4 	ENST00000545297.1|SURF4|ENSG00000148248.9|surfeit 4
hg19_v2_chr5_-_88119580_88119605	0.285599	GLI2	ENST00000539796.1|MEF2C|ENSG00000081189.9|myocyte enhancer factor 2C
hg19_v2_chr9_-_113800317_113800328	0.284393	GLI2	ENST00000374431.3|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1
hg19_v2_chr1_+_70876926_70877066	0.284336	GLI2	ENST00000370938.3|CTH|ENSG00000116761.7|cystathionase (cystathionine gamma-lyase) 	ENST00000346806.2|CTH|ENSG00000116761.7|cystathionase (cystathionine gamma-lyase)
hg19_v2_chr19_+_47105309_47105329	0.282343	GLI2	ENST00000599839.1|CALM3|ENSG00000160014.12|calmodulin 3 (phosphorylase kinase, delta) 	ENST00000596362.1|CALM3|ENSG00000160014.12|calmodulin 3 (phosphorylase kinase, delta)
hg19_v2_chr11_+_69931519_69931528	0.282317	GLI2	ENST00000316296.5|ANO1|ENSG00000131620.13|anoctamin 1, calcium activated chloride channel 	ENST00000530676.1|ANO1|ENSG00000131620.13|anoctamin 1, calcium activated chloride channel
hg19_v2_chr19_+_676385_676403	0.282232	GLI2	ENST00000166139.4|FSTL3|ENSG00000070404.5|follistatin-like 3 (secreted glycoprotein)
hg19_v2_chr2_+_37571845_37571874	0.280962	GLI2	ENST00000537448.1|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase
hg19_v2_chrX_-_107019181_107019488	0.280516	GLI2	ENST00000315660.4|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000372384.2|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000502650.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000506724.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3
hg19_v2_chr2_+_37571717_37571779	0.28021	GLI2	ENST00000338415.3|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase 	ENST00000404976.1|QPCT|ENSG00000115828.11|glutaminyl-peptide cyclotransferase
hg19_v2_chr16_+_88872176_88872176	0.280009	GLI2	ENST00000569140.1|CDT1|ENSG00000167513.4|chromatin licensing and DNA replication factor 1
hg19_v2_chr19_-_15343191_15343270	0.279799	GLI2	ENST00000221730.3|EPHX3|ENSG00000105131.3|epoxide hydrolase 3
hg19_v2_chr5_-_132112921_132112960	0.278709	GLI2	ENST00000378721.4|SEPT8|ENSG00000164402.9|septin 8 	ENST00000378701.1|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr2_-_224702257_224702266	0.275357	GLI2	ENST00000409375.1|AP1S3|ENSG00000152056.12|adaptor-related protein complex 1, sigma 3 subunit
hg19_v2_chr12_-_95009837_95009854	0.27522	GLI2	ENST00000551457.1|TMCC3|ENSG00000057704.6|transmembrane and coiled-coil domain family 3
hg19_v2_chr20_-_6103666_6103737	0.274746	GLI2	ENST00000536936.1|FERMT1|ENSG00000101311.11|fermitin family member 1
hg19_v2_chr5_+_89770696_89770727	0.274445	GLI2	ENST00000504930.1|POLR3G|ENSG00000113356.6|polymerase (RNA) III (DNA directed) polypeptide G (32kD) 	ENST00000514483.1|POLR3G|ENSG00000113356.6|polymerase (RNA) III (DNA directed) polypeptide G (32kD)
hg19_v2_chr1_+_203595903_203595934	0.274303	GLI2	ENST00000367218.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000367219.3|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4 	ENST00000391954.2|ATP2B4|ENSG00000058668.10|ATPase, Ca++ transporting, plasma membrane 4
hg19_v2_chr9_+_95858485_95858567	0.273447	GLI2	ENST00000375464.2|C9orf89|ENSG00000165233.13|chromosome 9 open reading frame 89
hg19_v2_chr1_-_53608289_53608315	0.269868	GLI2	ENST00000371491.4|SLC1A7|ENSG00000162383.7|solute carrier family 1 (glutamate transporter), member 7
hg19_v2_chr9_+_126131131_126131168	0.267895	GLI2	ENST00000373629.2|CRB2|ENSG00000148204.7|crumbs homolog 2 (Drosophila)
hg19_v2_chr10_+_105314881_105314989	0.266115	GLI2	ENST00000437579.1|NEURL|ENSG00000107954.6|neuralized E3 ubiquitin protein ligase 1
hg19_v2_chr8_-_124408652_124408712	0.265068	GLI2	ENST00000287394.5|ATAD2|ENSG00000156802.8|ATPase family, AAA domain containing 2
hg19_v2_chr16_+_30064411_30064428	0.264601	GLI2	ENST00000338110.5|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate
hg19_v2_chr11_+_18230685_18230720	0.264575	GLI2	ENST00000340135.3|RP11-113D6.10|ENSG00000189332.4|Putative mitochondrial carrier protein LOC494141  	ENST00000534640.1|RP11-113D6.10|ENSG00000189332.4|Putative mitochondrial carrier protein LOC494141
hg19_v2_chr17_+_29248953_29248978	0.260122	GLI2	ENST00000581285.1|ADAP2|ENSG00000184060.6|ArfGAP with dual PH domains 2
hg19_v2_chr10_+_75910960_75910989	0.26011	GLI2	ENST00000539909.1|ADK|ENSG00000156110.9|adenosine kinase 	ENST00000286621.2|ADK|ENSG00000156110.9|adenosine kinase
hg19_v2_chr9_-_113800341_113800373	0.257573	GLI2	ENST00000358883.4|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1
hg19_v2_chr11_-_128392085_128392232	0.256524	GLI2	ENST00000526145.2|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000531611.1|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000319397.6|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000345075.4|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000535549.1|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1
hg19_v2_chr10_+_124221036_124221047	0.256507	GLI2	ENST00000368984.3|HTRA1|ENSG00000166033.7|HtrA serine peptidase 1
hg19_v2_chr17_+_42923686_42923721	0.255967	GLI2	ENST00000591513.1|HIGD1B|ENSG00000131097.2|HIG1 hypoxia inducible domain family, member 1B
hg19_v2_chr2_+_64681103_64681165	0.255605	GLI2	ENST00000464281.1|LGALSL|ENSG00000119862.8|lectin, galactoside-binding-like
hg19_v2_chr5_-_132112907_132112918	0.254849	GLI2	ENST00000458488.2|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr19_-_48673552_48673578	0.25484	GLI2	ENST00000536218.1|LIG1|ENSG00000105486.9|ligase I, DNA, ATP-dependent 	ENST00000596549.1|LIG1|ENSG00000105486.9|ligase I, DNA, ATP-dependent
hg19_v2_chr1_+_152881014_152881031	0.252583	GLI2	ENST00000368764.3|IVL|ENSG00000163207.5|involucrin 	ENST00000392667.2|IVL|ENSG00000163207.5|involucrin
hg19_v2_chr20_+_44637526_44637554	0.25159	GLI2	ENST00000372330.3|MMP9|ENSG00000100985.7|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)
hg19_v2_chr22_+_41956767_41956852	0.250918	GLI2	ENST00000306149.7|CSDC2|ENSG00000172346.10|cold shock domain containing C2, RNA binding
hg19_v2_chr11_+_66025938_66026016	0.249989	GLI2	ENST00000394066.2|KLC2|ENSG00000174996.7|kinesin light chain 2
hg19_v2_chr19_+_17858547_17858582	0.249313	GLI2	ENST00000600676.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000600209.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000596309.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000598539.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000597474.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000593385.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000598067.1|FCHO1|ENSG00000130475.10|FCH domain only 1 	ENST00000593833.1|FCHO1|ENSG00000130475.10|FCH domain only 1
hg19_v2_chr2_+_220492287_220492338	0.248389	GLI2	ENST00000273063.6|SLC4A3|ENSG00000114923.12|solute carrier family 4 (anion exchanger), member 3 	ENST00000373762.3|SLC4A3|ENSG00000114923.12|solute carrier family 4 (anion exchanger), member 3
hg19_v2_chr5_-_141060389_141060439	0.24777	GLI2	ENST00000504448.1|ARAP3|ENSG00000120318.11|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
hg19_v2_chr7_-_4923315_4923360	0.247768	GLI2	ENST00000399583.3|RADIL|ENSG00000157927.12|Ras association and DIL domains
hg19_v2_chr19_-_40896081_40896094	0.247704	GLI2	ENST00000291823.2|HIPK4|ENSG00000160396.8|homeodomain interacting protein kinase 4
hg19_v2_chr19_+_45281118_45281181	0.246822	GLI2	ENST00000270279.3|CBLC|ENSG00000142273.6|Cbl proto-oncogene C, E3 ubiquitin protein ligase 	ENST00000341505.4|CBLC|ENSG00000142273.6|Cbl proto-oncogene C, E3 ubiquitin protein ligase
hg19_v2_chr1_-_153585539_153585559	0.246401	GLI2	ENST00000368706.4|S100A16|ENSG00000188643.6|S100 calcium binding protein A16
hg19_v2_chr1_-_94079648_94079671	0.245846	GLI2	ENST00000370247.3|BCAR3|ENSG00000137936.12|breast cancer anti-estrogen resistance 3
hg19_v2_chr1_+_150521876_150521901	0.244551	GLI2	ENST00000369041.5|ADAMTSL4|ENSG00000143382.9|ADAMTS-like 4 	ENST00000538795.1|AL356356.1|ENSG00000225996.2|Protein LOC100996516  	ENST00000271643.4|ADAMTSL4|ENSG00000143382.9|ADAMTS-like 4
hg19_v2_chr19_-_38397228_38397266	0.241701	GLI2	ENST00000447313.2|WDR87|ENSG00000171804.5|WD repeat domain 87
hg19_v2_chr1_-_36185073_36185073	0.241145	GLI2	ENST00000270815.4|C1orf216|ENSG00000142686.7|chromosome 1 open reading frame 216
hg19_v2_chr9_+_126118449_126118539	0.240855	GLI2	ENST00000359999.3|CRB2|ENSG00000148204.7|crumbs homolog 2 (Drosophila) 	ENST00000373631.3|CRB2|ENSG00000148204.7|crumbs homolog 2 (Drosophila)
hg19_v2_chr20_+_44509857_44509880	0.239565	GLI2	ENST00000372523.1|ZSWIM1|ENSG00000168612.4|zinc finger, SWIM-type containing 1 	ENST00000372520.1|ZSWIM1|ENSG00000168612.4|zinc finger, SWIM-type containing 1
hg19_v2_chr6_-_53213587_53213772	0.238525	GLI2	ENST00000542638.1|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000370913.5|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000541407.1|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5
hg19_v2_chr7_-_50518022_50518088	0.23691	GLI2	ENST00000356889.4|FIGNL1|ENSG00000132436.7|fidgetin-like 1 	ENST00000420829.1|FIGNL1|ENSG00000132436.7|fidgetin-like 1 	ENST00000448788.1|FIGNL1|ENSG00000132436.7|fidgetin-like 1 	ENST00000395556.2|FIGNL1|ENSG00000132436.7|fidgetin-like 1 	ENST00000422854.1|FIGNL1|ENSG00000132436.7|fidgetin-like 1 	ENST00000435566.1|FIGNL1|ENSG00000132436.7|fidgetin-like 1 	ENST00000433017.1|FIGNL1|ENSG00000132436.7|fidgetin-like 1
hg19_v2_chr19_+_16178317_16178354	0.235609	GLI2	ENST00000344824.6|TPM4|ENSG00000167460.10|tropomyosin 4 	ENST00000538887.1|TPM4|ENSG00000167460.10|tropomyosin 4
hg19_v2_chr22_-_29137771_29137837	0.235284	GLI2	ENST00000439200.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000405598.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000398017.2|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000425190.2|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000348295.3|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000382578.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000382565.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000382566.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000382580.2|CHEK2|ENSG00000183765.16|checkpoint kinase 2 	ENST00000328354.6|CHEK2|ENSG00000183765.16|checkpoint kinase 2
hg19_v2_chr7_-_4923259_4923310	0.233248	GLI2	ENST00000536091.1|RADIL|ENSG00000157927.12|Ras association and DIL domains
hg19_v2_chr9_-_34637718_34637791	0.232977	GLI2	ENST00000378892.1|SIGMAR1|ENSG00000147955.12|sigma non-opioid intracellular receptor 1 	ENST00000277010.4|SIGMAR1|ENSG00000147955.12|sigma non-opioid intracellular receptor 1
hg19_v2_chr22_-_29138386_29138410	0.231909	GLI2	ENST00000544772.1|CHEK2|ENSG00000183765.16|checkpoint kinase 2
hg19_v2_chr9_-_37785037_37785079	0.230589	GLI2	ENST00000327304.5|EXOSC3|ENSG00000107371.8|exosome component 3 	ENST00000396521.3|EXOSC3|ENSG00000107371.8|exosome component 3
hg19_v2_chr3_-_179754556_179754577	0.230436	GLI2	ENST00000263962.8|PEX5L|ENSG00000114757.14|peroxisomal biogenesis factor 5-like
hg19_v2_chr1_-_52499443_52499499	0.228854	GLI2	ENST00000371614.1|KTI12|ENSG00000198841.3|KTI12 homolog, chromatin associated (S. cerevisiae)
hg19_v2_chr20_+_814377_814452	0.228736	GLI2	ENST00000304189.2|FAM110A|ENSG00000125898.8|family with sequence similarity 110, member A 	ENST00000381939.1|FAM110A|ENSG00000125898.8|family with sequence similarity 110, member A
hg19_v2_chr21_+_45079409_45079452	0.227847	GLI2	ENST00000340648.4|RRP1B|ENSG00000160208.11|ribosomal RNA processing 1B
hg19_v2_chr19_-_59070239_59070359	0.227402	GLI2	ENST00000595957.1|UBE2M|ENSG00000130725.3|ubiquitin-conjugating enzyme E2M 	ENST00000253023.3|UBE2M|ENSG00000130725.3|ubiquitin-conjugating enzyme E2M
hg19_v2_chr11_+_66025167_66025190	0.226978	GLI2	ENST00000394067.2|KLC2|ENSG00000174996.7|kinesin light chain 2 	ENST00000316924.5|KLC2|ENSG00000174996.7|kinesin light chain 2 	ENST00000421552.1|KLC2|ENSG00000174996.7|kinesin light chain 2 	ENST00000394078.1|KLC2|ENSG00000174996.7|kinesin light chain 2
hg19_v2_chr3_+_46598888_46598888	0.226976	GLI2	ENST00000599511.1|LUZPP1|ENSG00000268324.1|HCG1777807; Leucine zipper protein 3; Uncharacterized protein
hg19_v2_chr10_+_75936444_75936537	0.226388	GLI2	ENST00000372734.3|ADK|ENSG00000156110.9|adenosine kinase 	ENST00000541550.1|ADK|ENSG00000156110.9|adenosine kinase
hg19_v2_chr14_-_39572279_39572340	0.226112	GLI2	ENST00000536508.1|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae)
hg19_v2_chr6_-_26027480_26027522	0.225088	GLI2	ENST00000377364.3|HIST1H4B|ENSG00000124529.3|histone cluster 1, H4b
hg19_v2_chr1_-_161207875_161207901	0.223905	GLI2	ENST00000512372.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000437437.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000442691.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000412844.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000428574.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000505005.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000508740.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000508387.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000504010.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000511676.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000502985.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367981.3|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000515621.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000511944.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000511748.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367984.4|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367985.3|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr21_-_40555393_40555419	0.222524	GLI2	ENST00000380900.2|PSMG1|ENSG00000183527.7|proteasome (prosome, macropain) assembly chaperone 1
hg19_v2_chr19_-_40791302_40791443	0.220225	GLI2	ENST00000392038.2|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2 	ENST00000578123.1|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2
hg19_v2_chr14_-_71107921_71108085	0.218267	GLI2	ENST00000553982.1|CTD-2540L5.5|ENSG00000259115.1|CTD-2540L5.5	ENST00000500016.1|CTD-2540L5.6|ENSG00000245466.1|CTD-2540L5.6
hg19_v2_chr5_+_148724993_148725102	0.217844	GLI2	ENST00000513661.1|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli) 	ENST00000329271.3|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli) 	ENST00000416916.2|GRPEL2|ENSG00000164284.10|GrpE-like 2, mitochondrial (E. coli)
hg19_v2_chr13_-_46756351_46756459	0.216443	GLI2	ENST00000323076.2|LCP1|ENSG00000136167.9|lymphocyte cytosolic protein 1 (L-plastin)
hg19_v2_chr1_-_85358850_85358906	0.216374	GLI2	ENST00000370611.3|LPAR3|ENSG00000171517.5|lysophosphatidic acid receptor 3
hg19_v2_chr1_+_154947126_154947147	0.215023	GLI2	ENST00000368439.1|CKS1B|ENSG00000173207.8|CDC28 protein kinase regulatory subunit 1B
hg19_v2_chr1_+_154947148_154947175	0.214676	GLI2	ENST00000368436.1|CKS1B|ENSG00000173207.8|CDC28 protein kinase regulatory subunit 1B 	ENST00000308987.5|CKS1B|ENSG00000173207.8|CDC28 protein kinase regulatory subunit 1B
hg19_v2_chr2_-_172290482_172290596	0.21333	GLI2	ENST00000442541.1|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000392599.2|METTL8|ENSG00000123600.14|methyltransferase like 8 	ENST00000375258.4|METTL8|ENSG00000123600.14|methyltransferase like 8
hg19_v2_chr5_+_154237778_154237822	0.212904	GLI2	ENST00000523698.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000517876.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000520472.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8
hg19_v2_chr13_-_30169807_30169839	0.211418	GLI2	ENST00000380752.5|SLC7A1|ENSG00000139514.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg19_v2_chr7_-_23053693_23053715	0.211339	GLI2	ENST00000409763.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A 	ENST00000409923.1|FAM126A|ENSG00000122591.7|family with sequence similarity 126, member A
hg19_v2_chr18_+_21269404_21269427	0.209609	GLI2	ENST00000313654.9|LAMA3|ENSG00000053747.11|laminin, alpha 3
hg19_v2_chr2_+_201450591_201450680	0.208736	GLI2	ENST00000374700.2|AOX1|ENSG00000138356.9|aldehyde oxidase 1
hg19_v2_chr17_+_36584662_36584730	0.205713	GLI2	ENST00000431231.2|ARHGAP23|ENSG00000225485.3|Rho GTPase activating protein 23 	ENST00000437668.3|ARHGAP23|ENSG00000225485.3|Rho GTPase activating protein 23
hg19_v2_chr17_+_80517216_80517251	0.205343	GLI2	ENST00000531030.1|FOXK2|ENSG00000141568.15|forkhead box K2 	ENST00000526383.2|FOXK2|ENSG00000141568.15|forkhead box K2
hg19_v2_chr12_-_82152444_82152475	0.204757	GLI2	ENST00000549325.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000550584.2|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr11_-_64646086_64646191	0.20458	GLI2	ENST00000320631.3|EHD1|ENSG00000110047.13|EH-domain containing 1
hg19_v2_chr17_-_41116454_41116515	0.204208	GLI2	ENST00000427569.2|AARSD1|ENSG00000266967.2|alanyl-tRNA synthetase domain containing 1 	ENST00000430739.1|AARSD1|ENSG00000266967.2|alanyl-tRNA synthetase domain containing 1
hg19_v2_chr10_-_105212141_105212183	0.203173	GLI2	ENST00000369788.3|CALHM2|ENSG00000138172.6|calcium homeostasis modulator 2
hg19_v2_chr10_-_101380121_101380235	0.202704	GLI2	ENST00000370495.4|SLC25A28|ENSG00000155287.6|solute carrier family 25 (mitochondrial iron transporter), member 28
hg19_v2_chr3_-_179754806_179754872	0.202483	GLI2	ENST00000485199.1|PEX5L|ENSG00000114757.14|peroxisomal biogenesis factor 5-like
hg19_v2_chr16_-_30022293_30022401	0.202256	GLI2	ENST00000565273.1|DOC2A|ENSG00000149927.13|double C2-like domains, alpha 	ENST00000567332.2|DOC2A|ENSG00000149927.13|double C2-like domains, alpha 	ENST00000350119.4|DOC2A|ENSG00000149927.13|double C2-like domains, alpha
hg19_v2_chrX_+_135618258_135618354	0.202119	GLI2	ENST00000440515.1|VGLL1|ENSG00000102243.8|vestigial like 1 (Drosophila) 	ENST00000456412.1|VGLL1|ENSG00000102243.8|vestigial like 1 (Drosophila)
hg19_v2_chr11_-_13484713_13484850	0.20077	GLI2	ENST00000526841.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000529708.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000278174.5|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10 	ENST00000528120.1|BTBD10|ENSG00000148925.6|BTB (POZ) domain containing 10
hg19_v2_chr2_+_131369054_131369054	0.199737	GLI2	ENST00000409602.1|POTEJ|ENSG00000222038.3|POTE ankyrin domain family, member J
hg19_v2_chr5_-_176923846_176923888	0.198436	GLI2	ENST00000506537.1|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma)
hg19_v2_chr12_-_8814669_8814767	0.197936	GLI2	ENST00000535411.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5 	ENST00000540087.1|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr5_+_149877334_149877354	0.197115	GLI2	ENST00000523767.1|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr1_+_153600869_153600940	0.197048	GLI2	ENST00000292169.1|S100A1|ENSG00000160678.7|S100 calcium binding protein A1 	ENST00000368696.3|S100A1|ENSG00000160678.7|S100 calcium binding protein A1 	ENST00000436839.1|S100A1|ENSG00000160678.7|S100 calcium binding protein A1
hg19_v2_chr10_+_49892904_49892925	0.196457	GLI2	ENST00000360890.2|WDFY4|ENSG00000128815.13|WDFY family member 4
hg19_v2_chr12_-_120687948_120687971	0.196441	GLI2	ENST00000458477.2|PXN|ENSG00000089159.11|paxillin
hg19_v2_chr12_+_57853918_57853934	0.193806	GLI2	ENST00000532291.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1 	ENST00000543426.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1 	ENST00000228682.2|GLI1|ENSG00000111087.5|GLI family zinc finger 1 	ENST00000546141.1|GLI1|ENSG00000111087.5|GLI family zinc finger 1
hg19_v2_chr7_+_150811705_150811765	0.192818	GLI2	ENST00000335367.3|AGAP3|ENSG00000133612.14|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
hg19_v2_chr17_+_44076616_44076616	0.192681	GLI2	ENST00000537309.1|STH|ENSG00000256762.1|saitohin
hg19_v2_chr10_-_116164239_116164268	0.190974	GLI2	ENST00000419268.1|AFAP1L2|ENSG00000169129.10|actin filament associated protein 1-like 2 	ENST00000304129.4|AFAP1L2|ENSG00000169129.10|actin filament associated protein 1-like 2 	ENST00000545353.1|AFAP1L2|ENSG00000169129.10|actin filament associated protein 1-like 2
hg19_v2_chr5_-_138739739_138739793	0.19008	GLI2	ENST00000514983.1|SPATA24|ENSG00000170469.6|spermatogenesis associated 24 	ENST00000507779.2|SPATA24|ENSG00000170469.6|spermatogenesis associated 24 	ENST00000451821.2|SPATA24|ENSG00000170469.6|spermatogenesis associated 24 	ENST00000450845.2|SPATA24|ENSG00000170469.6|spermatogenesis associated 24 	ENST00000509959.1|SPATA24|ENSG00000170469.6|spermatogenesis associated 24 	ENST00000302091.5|SPATA24|ENSG00000170469.6|spermatogenesis associated 24
hg19_v2_chr2_-_197041193_197041227	0.189894	GLI2	ENST00000409228.1|STK17B|ENSG00000081320.6|serine/threonine kinase 17b
hg19_v2_chr2_-_24308051_24308085	0.189726	GLI2	ENST00000238721.4|TP53I3|ENSG00000115129.9|tumor protein p53 inducible protein 3 	ENST00000335934.4|TP53I3|ENSG00000115129.9|tumor protein p53 inducible protein 3
hg19_v2_chr17_-_79827808_79827882	0.189694	GLI2	ENST00000580685.1|ARHGDIA|ENSG00000141522.7|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v2_chrX_+_151999511_151999561	0.187805	GLI2	ENST00000370274.3|NSDHL|ENSG00000147383.6|NAD(P) dependent steroid dehydrogenase-like 	ENST00000440023.1|NSDHL|ENSG00000147383.6|NAD(P) dependent steroid dehydrogenase-like 	ENST00000432467.1|NSDHL|ENSG00000147383.6|NAD(P) dependent steroid dehydrogenase-like
hg19_v2_chr17_+_40761660_40761748	0.187583	GLI2	ENST00000251413.3|TUBG1|ENSG00000131462.3|tubulin, gamma 1 	ENST00000591509.1|TUBG1|ENSG00000131462.3|tubulin, gamma 1
hg19_v2_chr7_-_150780487_150780597	0.185974	GLI2	ENST00000482202.1|TMUB1|ENSG00000164897.8|transmembrane and ubiquitin-like domain containing 1
hg19_v2_chr16_+_610407_610429	0.185816	GLI2	ENST00000409413.3|C16orf11|ENSG00000161992.5|chromosome 16 open reading frame 11
hg19_v2_chr9_+_131709966_131710000	0.185108	GLI2	ENST00000372577.2|NUP188|ENSG00000095319.10|nucleoporin 188kDa
hg19_v2_chr14_-_39572345_39572453	0.184843	GLI2	ENST00000548032.2|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae) 	ENST00000556092.1|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae) 	ENST00000557280.1|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae) 	ENST00000545328.2|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae) 	ENST00000553970.1|SEC23A|ENSG00000100934.10|Sec23 homolog A (S. cerevisiae)
hg19_v2_chr10_+_98064085_98064163	0.184652	GLI2	ENST00000419175.1|DNTT|ENSG00000107447.4|DNA nucleotidylexotransferase 	ENST00000371174.2|DNTT|ENSG00000107447.4|DNA nucleotidylexotransferase
hg19_v2_chr1_-_16563641_16563709	0.184392	GLI2	ENST00000375599.3|RSG1|ENSG00000132881.7|REM2 and RAB-like small GTPase 1
hg19_v2_chr9_+_117085336_117085377	0.184087	GLI2	ENST00000259396.8|ORM1|ENSG00000229314.4|orosomucoid 1 	ENST00000538816.1|ORM1|ENSG00000229314.4|orosomucoid 1
hg19_v2_chr6_-_31088214_31088228	0.184044	GLI2	ENST00000376288.2|CDSN|ENSG00000204539.3|corneodesmosin
hg19_v2_chr3_-_50336278_50336323	0.183966	GLI2	ENST00000359051.3|HYAL3|ENSG00000186792.11|hyaluronoglucosaminidase 3 	ENST00000417393.1|NAT6|ENSG00000243477.1|N-acetyltransferase 6 (GCN5-related) 	ENST00000442620.1|NAT6|ENSG00000243477.1|N-acetyltransferase 6 (GCN5-related) 	ENST00000452674.1|NAT6|ENSG00000243477.1|N-acetyltransferase 6 (GCN5-related)
hg19_v2_chr17_-_54991369_54991388	0.183923	GLI2	ENST00000537230.1|TRIM25|ENSG00000121060.10|tripartite motif containing 25
hg19_v2_chr11_+_124609742_124609817	0.183639	GLI2	ENST00000284292.6|NRGN|ENSG00000154146.8|neurogranin (protein kinase C substrate, RC3)
hg19_v2_chr3_+_49591881_49591940	0.183586	GLI2	ENST00000296452.4|BSN|ENSG00000164061.4|bassoon presynaptic cytomatrix protein
hg19_v2_chr17_+_80332153_80332153	0.181964	GLI2	ENST00000313135.2|UTS2R|ENSG00000181408.2|urotensin 2 receptor
hg19_v2_chr11_+_57308979_57308979	0.180813	GLI2	ENST00000457912.1|SMTNL1|ENSG00000214872.4|smoothelin-like 1
hg19_v2_chr7_-_134001663_134001803	0.180461	GLI2	ENST00000378509.4|SLC35B4|ENSG00000205060.6|solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4
hg19_v2_chr1_-_161207953_161207975	0.180216	GLI2	ENST00000367982.4|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr15_-_49447835_49447858	0.179504	GLI2	ENST00000388901.5|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000299259.6|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2
hg19_v2_chr11_+_68451943_68451986	0.179413	GLI2	ENST00000265643.3|GAL|ENSG00000069482.6|galanin/GMAP prepropeptide
hg19_v2_chr12_+_48099858_48099877	0.178953	GLI2	ENST00000547799.1|RP1-197B17.3|ENSG00000257433.1|RP1-197B17.3
hg19_v2_chr10_-_116164450_116164515	0.178618	GLI2	ENST00000369271.3|AFAP1L2|ENSG00000169129.10|actin filament associated protein 1-like 2
hg19_v2_chr11_-_64527425_64527461	0.177618	GLI2	ENST00000377432.3|PYGM|ENSG00000068976.9|phosphorylase, glycogen, muscle
hg19_v2_chr16_+_15744078_15744133	0.177135	GLI2	ENST00000396354.1|NDE1|ENSG00000072864.8|nudE neurodevelopment protein 1 	ENST00000570727.1|NDE1|ENSG00000072864.8|nudE neurodevelopment protein 1
hg19_v2_chr17_-_80009650_80009735	0.176295	GLI2	ENST00000310496.4|RFNG|ENSG00000169733.7|RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
hg19_v2_chr17_+_4736627_4736720	0.176104	GLI2	ENST00000355280.6|MINK1|ENSG00000141503.11|misshapen-like kinase 1 	ENST00000347992.7|MINK1|ENSG00000141503.11|misshapen-like kinase 1
hg19_v2_chr2_+_242811874_242811904	0.17533	GLI2	ENST00000343216.3|CXXC11|ENSG00000188011.5|CXXC finger protein 11
hg19_v2_chrX_+_51075658_51075686	0.175248	GLI2	ENST00000356450.2|NUDT10|ENSG00000122824.6|nudix (nucleoside diphosphate linked moiety X)-type motif 10
hg19_v2_chr16_+_29802036_29802086	0.174655	GLI2	ENST00000561482.1|KIF22|ENSG00000079616.8|kinesin family member 22 	ENST00000160827.4|KIF22|ENSG00000079616.8|kinesin family member 22 	ENST00000569636.2|KIF22|ENSG00000079616.8|kinesin family member 22 	ENST00000400750.2|KIF22|ENSG00000079616.8|kinesin family member 22
hg19_v2_chr19_+_2389784_2389784	0.174613	GLI2	ENST00000332578.3|TMPRSS9|ENSG00000178297.8|transmembrane protease, serine 9
hg19_v2_chr19_-_18197714_18197750	0.17435	GLI2	ENST00000322153.7|IL12RB1|ENSG00000096996.11|interleukin 12 receptor, beta 1
hg19_v2_chr22_-_26961328_26961339	0.173772	GLI2	ENST00000398110.2|TPST2|ENSG00000128294.11|tyrosylprotein sulfotransferase 2
hg19_v2_chr4_-_82393052_82393075	0.172826	GLI2	ENST00000335927.7|RASGEF1B|ENSG00000138670.12|RasGEF domain family, member 1B 	ENST00000504863.1|RASGEF1B|ENSG00000138670.12|RasGEF domain family, member 1B 	ENST00000264400.2|RASGEF1B|ENSG00000138670.12|RasGEF domain family, member 1B
hg19_v2_chr19_-_19754404_19754478	0.17146	GLI2	ENST00000587205.1|GMIP|ENSG00000089639.6|GEM interacting protein 	ENST00000445806.2|GMIP|ENSG00000089639.6|GEM interacting protein 	ENST00000203556.4|GMIP|ENSG00000089639.6|GEM interacting protein
hg19_v2_chr16_+_67062996_67063019	0.170988	GLI2	ENST00000561924.2|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr1_-_161208013_161208092	0.170783	GLI2	ENST00000515452.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367983.4|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chrX_-_52546189_52546197	0.169642	GLI2	ENST00000375570.1|XAGE1E|ENSG00000204375.5|X antigen family, member 1E 	ENST00000429372.2|XAGE1E|ENSG00000204375.5|X antigen family, member 1E
hg19_v2_chr12_+_113354341_113354422	0.169418	GLI2	ENST00000553152.1|OAS1|ENSG00000089127.8|2'-5'-oligoadenylate synthetase 1, 40/46kDa
hg19_v2_chr11_-_67407031_67407031	0.169259	GLI2	ENST00000335385.3|TBX10|ENSG00000167800.9|T-box 10
hg19_v2_chr12_+_57984965_57985059	0.168912	GLI2	ENST00000540759.2|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000551772.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000550465.1|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma 	ENST00000354947.5|PIP4K2C|ENSG00000166908.13|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma
hg19_v2_chr22_+_50528308_50528439	0.168088	GLI2	ENST00000545383.1|MOV10L1|ENSG00000073146.11|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse) 	ENST00000262794.5|MOV10L1|ENSG00000073146.11|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)
hg19_v2_chr2_+_241625749_241625758	0.167841	GLI2	ENST00000407635.2|AC011298.2|ENSG00000219159.3|AC011298.2
hg19_v2_chr1_-_45308616_45308735	0.167406	GLI2	ENST00000447098.2|PTCH2|ENSG00000117425.9|patched 2 	ENST00000372192.3|PTCH2|ENSG00000117425.9|patched 2
hg19_v2_chr22_+_20193905_20193930	0.167118	GLI2	ENST00000609602.1|LINC00896|ENSG00000236499.2|long intergenic non-protein coding RNA 896
hg19_v2_chr11_+_59824127_59824161	0.166378	GLI2	ENST00000278865.3|MS4A3|ENSG00000149516.9|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)
hg19_v2_chr20_+_18568537_18568585	0.166251	GLI2	ENST00000377452.3|DTD1|ENSG00000125821.7|D-tyrosyl-tRNA deacylase 1
hg19_v2_chr16_+_67063036_67063088	0.16435	GLI2	ENST00000290858.6|CBFB|ENSG00000067955.9|core-binding factor, beta subunit 	ENST00000564034.1|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chrX_+_47082408_47082460	0.163686	GLI2	ENST00000518022.1|CDK16|ENSG00000102225.11|cyclin-dependent kinase 16 	ENST00000276052.6|CDK16|ENSG00000102225.11|cyclin-dependent kinase 16
hg19_v2_chr2_+_220492116_220492137	0.163669	GLI2	ENST00000373760.2|SLC4A3|ENSG00000114923.12|solute carrier family 4 (anion exchanger), member 3
hg19_v2_chr5_-_176923803_176923832	0.163375	GLI2	ENST00000506161.1|PDLIM7|ENSG00000196923.9|PDZ and LIM domain 7 (enigma)
hg19_v2_chr5_-_132113036_132113061	0.161838	GLI2	ENST00000378706.1|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr14_+_74416989_74417041	0.161587	GLI2	ENST00000334571.2|COQ6|ENSG00000119723.11|coenzyme Q6 monooxygenase 	ENST00000554920.1|COQ6|ENSG00000119723.11|coenzyme Q6 monooxygenase
hg19_v2_chr1_+_47799542_47799624	0.161486	GLI2	ENST00000471289.2|CMPK1|ENSG00000162368.9|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic 	ENST00000450808.2|CMPK1|ENSG00000162368.9|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
hg19_v2_chr8_+_27183033_27183088	0.160246	GLI2	ENST00000420218.2|PTK2B|ENSG00000120899.13|protein tyrosine kinase 2 beta
hg19_v2_chr12_-_109125285_109125372	0.160018	GLI2	ENST00000552871.1|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C 	ENST00000261401.3|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C
hg19_v2_chr8_+_22428457_22428633	0.159437	GLI2	ENST00000517962.1|SORBS3|ENSG00000120896.9|sorbin and SH3 domain containing 3
hg19_v2_chr20_+_1246908_1246999	0.159107	GLI2	ENST00000381873.3|SNPH|ENSG00000101298.9|syntaphilin 	ENST00000381867.1|SNPH|ENSG00000101298.9|syntaphilin
hg19_v2_chr9_+_103189536_103189601	0.158801	GLI2	ENST00000374885.1|MSANTD3|ENSG00000066697.10|Myb/SANT-like DNA-binding domain containing 3
hg19_v2_chr21_-_33651324_33651380	0.158669	GLI2	ENST00000290130.3|MIS18A|ENSG00000159055.3|MIS18 kinetochore protein A
hg19_v2_chr7_-_111202511_111202573	0.158374	GLI2	ENST00000452895.1|IMMP2L|ENSG00000184903.5|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000452753.1|IMMP2L|ENSG00000184903.5|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 	ENST00000331762.3|IMMP2L|ENSG00000184903.5|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)
hg19_v2_chr10_-_46970474_46970515	0.15707	GLI2	ENST00000503753.1|SYT15|ENSG00000204176.9|synaptotagmin XV 	ENST00000374321.4|SYT15|ENSG00000204176.9|synaptotagmin XV
hg19_v2_chr11_-_63439013_63439091	0.156825	GLI2	ENST00000398868.3|ATL3|ENSG00000184743.8|atlastin GTPase 3
hg19_v2_chr15_-_49447771_49447822	0.154411	GLI2	ENST00000558843.1|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000542928.1|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000561248.1|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2
hg19_v2_chrX_+_52511761_52511769	0.154334	GLI2	ENST00000399795.3|XAGE1C|ENSG00000183461.12|X antigen family, member 1C 	ENST00000375589.1|XAGE1C|ENSG00000183461.12|X antigen family, member 1C
hg19_v2_chr19_+_4304585_4304627	0.153596	GLI2	ENST00000221856.6|FSD1|ENSG00000105255.6|fibronectin type III and SPRY domain containing 1
hg19_v2_chr7_+_2671663_2671790	0.153343	GLI2	ENST00000407643.1|TTYH3|ENSG00000136295.10|tweety family member 3
hg19_v2_chr19_-_19754354_19754370	0.152793	GLI2	ENST00000587238.1|GMIP|ENSG00000089639.6|GEM interacting protein
hg19_v2_chr1_-_229478714_229478815	0.152492	GLI2	ENST00000284617.2|CCSAP|ENSG00000154429.6|centriole, cilia and spindle-associated protein
hg19_v2_chr2_+_113479063_113479063	0.152025	GLI2	ENST00000327581.4|NT5DC4|ENSG00000144130.7|5'-nucleotidase domain containing 4
hg19_v2_chr17_-_202579_202633	0.150697	GLI2	ENST00000577079.1|RPH3AL|ENSG00000181031.11|rabphilin 3A-like (without C2 domains) 	ENST00000331302.7|RPH3AL|ENSG00000181031.11|rabphilin 3A-like (without C2 domains) 	ENST00000536489.2|RPH3AL|ENSG00000181031.11|rabphilin 3A-like (without C2 domains)
hg19_v2_chr17_-_73149921_73149971	0.150586	GLI2	ENST00000481647.1|HN1|ENSG00000189159.11|hematological and neurological expressed 1 	ENST00000470924.1|HN1|ENSG00000189159.11|hematological and neurological expressed 1
hg19_v2_chr22_+_48027423_48027466	0.150292	GLI2	ENST00000423737.1|RP11-191L9.4|ENSG00000224271.1|RP11-191L9.4
hg19_v2_chr2_-_232395169_232395206	0.149409	GLI2	ENST00000305141.4|NMUR1|ENSG00000171596.6|neuromedin U receptor 1
hg19_v2_chr17_+_18647326_18647388	0.149381	GLI2	ENST00000395667.1|FBXW10|ENSG00000171931.8|F-box and WD repeat domain containing 10 	ENST00000395665.4|FBXW10|ENSG00000171931.8|F-box and WD repeat domain containing 10 	ENST00000308799.4|FBXW10|ENSG00000171931.8|F-box and WD repeat domain containing 10 	ENST00000301938.4|FBXW10|ENSG00000171931.8|F-box and WD repeat domain containing 10
hg19_v2_chrX_-_52260355_52260363	0.149361	GLI2	ENST00000375602.1|XAGE1A|ENSG00000204379.6|X antigen family, member 1A 	ENST00000399800.3|XAGE1A|ENSG00000204379.6|X antigen family, member 1A
hg19_v2_chr6_-_36807762_36807812	0.149346	GLI2	ENST00000244751.2|CPNE5|ENSG00000124772.7|copine V
hg19_v2_chr6_-_33756867_33756950	0.148715	GLI2	ENST00000293760.5|LEMD2|ENSG00000161904.7|LEM domain containing 2
hg19_v2_chr19_-_10530784_10530827	0.148556	GLI2	ENST00000593124.1|CDC37|ENSG00000105401.2|cell division cycle 37
hg19_v2_chr21_+_37507210_37507361	0.14845	GLI2	ENST00000290354.5|CBR3|ENSG00000159231.5|carbonyl reductase 3
hg19_v2_chrX_-_52736211_52736239	0.147211	GLI2	ENST00000336777.5|SSX2|ENSG00000241476.3|synovial sarcoma, X breakpoint 2 	ENST00000337502.5|SSX2|ENSG00000241476.3|synovial sarcoma, X breakpoint 2
hg19_v2_chr14_+_106938440_106938474	0.14654	GLI2	ENST00000433371.1|LINC00221|ENSG00000187156.4|long intergenic non-protein coding RNA 221 	ENST00000449670.1|LINC00221|ENSG00000187156.4|long intergenic non-protein coding RNA 221 	ENST00000334298.3|LINC00221|ENSG00000187156.4|long intergenic non-protein coding RNA 221
hg19_v2_chr20_-_50722183_50722217	0.14553	GLI2	ENST00000371523.4|ZFP64|ENSG00000020256.15|ZFP64 zinc finger protein
hg19_v2_chr5_-_176889381_176889432	0.14541	GLI2	ENST00000393563.4|DBN1|ENSG00000113758.9|drebrin 1 	ENST00000512501.1|DBN1|ENSG00000113758.9|drebrin 1
hg19_v2_chr1_-_161207986_161208000	0.14535	GLI2	ENST00000506209.1|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3 	ENST00000367980.2|NR1I3|ENSG00000143257.7|nuclear receptor subfamily 1, group I, member 3
hg19_v2_chr1_-_245134273_245134390	0.145173	GLI2	ENST00000607453.1|RP11-156E8.1|ENSG00000272195.1|Uncharacterized protein
hg19_v2_chr2_+_220492373_220492391	0.144368	GLI2	ENST00000317151.3|SLC4A3|ENSG00000114923.12|solute carrier family 4 (anion exchanger), member 3
hg19_v2_chr1_-_182573514_182573543	0.143011	GLI2	ENST00000367558.5|RGS16|ENSG00000143333.6|regulator of G-protein signaling 16
hg19_v2_chr14_-_106068065_106068065	0.142591	GLI2	ENST00000390541.2|IGHE|ENSG00000211891.4|immunoglobulin heavy constant epsilon
hg19_v2_chr7_-_105319536_105319611	0.142471	GLI2	ENST00000477775.1|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr6_-_27841289_27841318	0.141136	GLI2	ENST00000355981.2|HIST1H4L|ENSG00000198558.2|histone cluster 1, H4l
hg19_v2_chr5_-_172036436_172036436	0.140692	GLI2	ENST00000601856.1|AC027309.1|ENSG00000268553.1|AC027309.1
hg19_v2_chr10_-_126694575_126694592	0.140087	GLI2	ENST00000334808.6|CTBP2|ENSG00000175029.12|C-terminal binding protein 2
hg19_v2_chr17_+_7483761_7483825	0.139957	GLI2	ENST00000584180.1|CD68|ENSG00000129226.9|CD68 molecule
hg19_v2_chr8_-_86132568_86132650	0.139783	GLI2	ENST00000321777.5|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000458398.2|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000431163.2|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000417663.2|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000524353.1|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000421308.2|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000545322.1|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59 	ENST00000518562.1|C8orf59|ENSG00000176731.7|chromosome 8 open reading frame 59
hg19_v2_chr12_-_54779511_54779577	0.139504	GLI2	ENST00000551109.1|ZNF385A|ENSG00000161642.13|zinc finger protein 385A 	ENST00000546970.1|ZNF385A|ENSG00000161642.13|zinc finger protein 385A
hg19_v2_chr19_-_2050852_2050895	0.139275	GLI2	ENST00000541165.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2 	ENST00000591601.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2
hg19_v2_chr1_-_20834586_20834656	0.138363	GLI2	ENST00000264198.3|MUL1|ENSG00000090432.5|mitochondrial E3 ubiquitin protein ligase 1
hg19_v2_chr19_+_34287751_34287807	0.137538	GLI2	ENST00000590771.1|KCTD15|ENSG00000153885.10|potassium channel tetramerization domain containing 15 	ENST00000589786.1|KCTD15|ENSG00000153885.10|potassium channel tetramerization domain containing 15 	ENST00000284006.6|KCTD15|ENSG00000153885.10|potassium channel tetramerization domain containing 15 	ENST00000588881.1|KCTD15|ENSG00000153885.10|potassium channel tetramerization domain containing 15
hg19_v2_chr20_-_62475273_62475273	0.137206	GLI2	ENST00000596861.1|AL158091.1|ENSG00000269223.1|Protein LOC100509861
hg19_v2_chr9_+_135937365_135937365	0.13714	GLI2	ENST00000372080.4|CEL|ENSG00000170835.10|carboxyl ester lipase 	ENST00000351304.7|CEL|ENSG00000170835.10|carboxyl ester lipase
hg19_v2_chr14_+_96342729_96342790	0.136612	GLI2	ENST00000504119.1|LINC00617|ENSG00000250366.2|long intergenic non-protein coding RNA 617
hg19_v2_chr1_-_229478236_229478308	0.136366	GLI2	ENST00000366687.1|CCSAP|ENSG00000154429.6|centriole, cilia and spindle-associated protein 	ENST00000452552.1|CCSAP|ENSG00000154429.6|centriole, cilia and spindle-associated protein
hg19_v2_chr22_+_39378346_39378366	0.136288	GLI2	ENST00000407298.3|APOBEC3B|ENSG00000179750.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B
hg19_v2_chr16_+_67063142_67063153	0.136035	GLI2	ENST00000412916.2|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr10_-_112064665_112064737	0.135804	GLI2	ENST00000369603.5|SMNDC1|ENSG00000119953.8|survival motor neuron domain containing 1
hg19_v2_chr7_-_229557_229557	0.135688	GLI2	ENST00000514988.1|AC145676.2|ENSG00000249852.1|Uncharacterized protein
hg19_v2_chr16_+_58497567_58497586	0.134977	GLI2	ENST00000258187.5|NDRG4|ENSG00000103034.10|NDRG family member 4
hg19_v2_chr6_-_133084580_133084605	0.134805	GLI2	ENST00000525270.1|VNN2|ENSG00000112303.9|vanin 2 	ENST00000530536.1|VNN2|ENSG00000112303.9|vanin 2 	ENST00000524919.1|VNN2|ENSG00000112303.9|vanin 2
hg19_v2_chr9_+_108456800_108456849	0.133199	GLI2	ENST00000434214.1|TMEM38B|ENSG00000095209.7|transmembrane protein 38B 	ENST00000374692.3|TMEM38B|ENSG00000095209.7|transmembrane protein 38B
hg19_v2_chr19_+_10381769_10381803	0.132893	GLI2	ENST00000423829.2|ICAM1|ENSG00000090339.4|intercellular adhesion molecule 1 	ENST00000588645.1|ICAM1|ENSG00000090339.4|intercellular adhesion molecule 1
hg19_v2_chr3_+_32993065_32993074	0.132646	GLI2	ENST00000330953.5|CCR4|ENSG00000183813.6|chemokine (C-C motif) receptor 4
hg19_v2_chr1_-_155947951_155947974	0.132614	GLI2	ENST00000313695.7|ARHGEF2|ENSG00000116584.13|Rho/Rac guanine nucleotide exchange factor (GEF) 2 	ENST00000497907.1|ARHGEF2|ENSG00000116584.13|Rho/Rac guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr1_-_11741155_11741271	0.132126	GLI2	ENST00000445656.1|MAD2L2|ENSG00000116670.10|MAD2 mitotic arrest deficient-like 2 (yeast) 	ENST00000376669.5|MAD2L2|ENSG00000116670.10|MAD2 mitotic arrest deficient-like 2 (yeast) 	ENST00000456915.1|MAD2L2|ENSG00000116670.10|MAD2 mitotic arrest deficient-like 2 (yeast) 	ENST00000376692.4|MAD2L2|ENSG00000116670.10|MAD2 mitotic arrest deficient-like 2 (yeast)
hg19_v2_chr11_+_73003824_73003859	0.131294	GLI2	ENST00000538328.1|P2RY6|ENSG00000171631.10|pyrimidinergic receptor P2Y, G-protein coupled, 6
hg19_v2_chrX_+_115567767_115567790	0.130532	GLI2	ENST00000371900.4|SLC6A14|ENSG00000087916.7|solute carrier family 6 (amino acid transporter), member 14
hg19_v2_chr4_-_7069760_7069924	0.1298	GLI2	ENST00000264954.4|GRPEL1|ENSG00000109519.8|GrpE-like 1, mitochondrial (E. coli)
hg19_v2_chr3_-_192635943_192635955	0.12933	GLI2	ENST00000392452.2|MB21D2|ENSG00000180611.6|Mab-21 domain containing 2
hg19_v2_chr1_-_243418621_243418648	0.129321	GLI2	ENST00000366544.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa 	ENST00000366543.1|CEP170|ENSG00000143702.11|centrosomal protein 170kDa
hg19_v2_chr17_-_15522826_15522826	0.128507	GLI2	ENST00000395906.3|CDRT1|ENSG00000241322.4|CMT1A duplicated region transcript 1
hg19_v2_chrX_-_132352373_132352384	0.128309	GLI2	ENST00000310125.4|TFDP3|ENSG00000183434.9|transcription factor Dp family, member 3
hg19_v2_chr19_-_17185848_17186010	0.127002	GLI2	ENST00000593360.1|HAUS8|ENSG00000131351.10|HAUS augmin-like complex, subunit 8
hg19_v2_chr2_+_233390890_233390903	0.126737	GLI2	ENST00000258385.3|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle) 	ENST00000536614.1|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle) 	ENST00000457943.2|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle)
hg19_v2_chrX_+_153146127_153146127	0.126556	GLI2	ENST00000452593.1|LCA10|ENSG00000196987.2|Putative lung carcinoma-associated protein 10  	ENST00000357566.1|LCA10|ENSG00000196987.2|Putative lung carcinoma-associated protein 10
hg19_v2_chr19_+_16338416_16338504	0.12629	GLI2	ENST00000586543.1|AP1M1|ENSG00000072958.4|adaptor-related protein complex 1, mu 1 subunit
hg19_v2_chr19_-_42806919_42806958	0.125854	GLI2	ENST00000595530.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) 	ENST00000538771.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa) 	ENST00000601865.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chrX_-_106960285_106960365	0.125155	GLI2	ENST00000503515.1|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3 	ENST00000372397.2|TSC22D3|ENSG00000157514.12|TSC22 domain family, member 3
hg19_v2_chr5_+_150157444_150157508	0.124741	GLI2	ENST00000526627.1|SMIM3|ENSG00000256235.1|small integral membrane protein 3
hg19_v2_chr19_-_10679697_10679735	0.124517	GLI2	ENST00000335766.2|CDKN2D|ENSG00000129355.6|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)
hg19_v2_chr14_+_101908402_101908413	0.124136	GLI2	ENST00000555725.1|RP11-168L7.3|ENSG00000259082.1|RP11-168L7.3
hg19_v2_chr17_-_46691990_46692066	0.124127	GLI2	ENST00000576562.1|HOXB8|ENSG00000120068.5|homeobox B8
hg19_v2_chr4_+_56814968_56815037	0.12403	GLI2	ENST00000422247.2|CEP135|ENSG00000174799.6|centrosomal protein 135kDa
hg19_v2_chr1_+_86934526_86934578	0.123626	GLI2	ENST00000394711.1|CLCA1|ENSG00000016490.11|chloride channel accessory 1
hg19_v2_chr1_-_38273840_38273888	0.123492	GLI2	ENST00000373044.2|YRDC|ENSG00000196449.3|yrdC N(6)-threonylcarbamoyltransferase domain containing
hg19_v2_chr1_+_151739131_151739177	0.123062	GLI2	ENST00000400999.1|OAZ3|ENSG00000143450.10|ornithine decarboxylase antizyme 3
hg19_v2_chr19_-_16284286_16284336	0.122909	GLI2	ENST00000379859.3|CIB3|ENSG00000141977.5|calcium and integrin binding family member 3 	ENST00000269878.4|CIB3|ENSG00000141977.5|calcium and integrin binding family member 3
hg19_v2_chrX_-_54384425_54384495	0.122212	GLI2	ENST00000375169.3|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3 	ENST00000354646.2|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3
hg19_v2_chr19_-_15543368_15543561	0.122055	GLI2	ENST00000599686.3|WIZ|ENSG00000011451.13|widely interspaced zinc finger motifs
hg19_v2_chrX_+_152086373_152086414	0.12159	GLI2	ENST00000318529.8|ZNF185|ENSG00000147394.14|zinc finger protein 185 (LIM domain)
hg19_v2_chr7_+_23145884_23145917	0.121486	GLI2	ENST00000409689.1|KLHL7|ENSG00000122550.13|kelch-like family member 7 	ENST00000410047.1|KLHL7|ENSG00000122550.13|kelch-like family member 7
hg19_v2_chr11_+_13690200_13690244	0.121457	GLI2	ENST00000354817.3|FAR1|ENSG00000197601.8|fatty acyl CoA reductase 1
hg19_v2_chr5_+_150157860_150157883	0.121432	GLI2	ENST00000600109.1|AC010441.1|ENSG00000269636.1|AC010441.1
hg19_v2_chr16_+_56385290_56385353	0.121375	GLI2	ENST00000564727.1|GNAO1|ENSG00000087258.9|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O
hg19_v2_chr16_+_56899114_56899127	0.121078	GLI2	ENST00000566786.1|SLC12A3|ENSG00000070915.5|solute carrier family 12 (sodium/chloride transporter), member 3 	ENST00000438926.2|SLC12A3|ENSG00000070915.5|solute carrier family 12 (sodium/chloride transporter), member 3 	ENST00000563236.1|SLC12A3|ENSG00000070915.5|solute carrier family 12 (sodium/chloride transporter), member 3 	ENST00000262502.5|SLC12A3|ENSG00000070915.5|solute carrier family 12 (sodium/chloride transporter), member 3
hg19_v2_chr11_+_64358686_64358700	0.120692	GLI2	ENST00000473690.1|SLC22A12|ENSG00000197891.7|solute carrier family 22 (organic anion/urate transporter), member 12
hg19_v2_chr17_-_7297519_7297593	0.120648	GLI2	ENST00000576362.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000571078.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate)
hg19_v2_chr6_+_125540951_125540991	0.120324	GLI2	ENST00000524679.1|TPD52L1|ENSG00000111907.16|tumor protein D52-like 1
hg19_v2_chr4_+_3344141_3344178	0.120224	GLI2	ENST00000306648.7|RGS12|ENSG00000159788.14|regulator of G-protein signaling 12
hg19_v2_chr11_-_66103932_66104000	0.120219	GLI2	ENST00000311320.4|RIN1|ENSG00000174791.6|Ras and Rab interactor 1
hg19_v2_chr8_+_38965048_38965292	0.120006	GLI2	ENST00000399831.3|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32 	ENST00000437682.2|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32 	ENST00000519315.1|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32 	ENST00000379907.4|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32 	ENST00000522506.1|ADAM32|ENSG00000197140.10|ADAM metallopeptidase domain 32
hg19_v2_chr8_+_7705398_7705621	0.119647	GLI2	ENST00000400125.2|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A 	ENST00000434307.2|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A 	ENST00000326558.5|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A 	ENST00000351436.4|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A 	ENST00000528033.1|SPAG11A|ENSG00000178287.13|sperm associated antigen 11A
hg19_v2_chr1_+_3388181_3388194	0.119377	GLI2	ENST00000418137.1|ARHGEF16|ENSG00000130762.10|Rho guanine nucleotide exchange factor (GEF) 16 	ENST00000413250.2|ARHGEF16|ENSG00000130762.10|Rho guanine nucleotide exchange factor (GEF) 16
hg19_v2_chr19_-_41196534_41196568	0.118934	GLI2	ENST00000252891.4|NUMBL|ENSG00000105245.5|numb homolog (Drosophila)-like
hg19_v2_chr1_-_40157345_40157375	0.118847	GLI2	ENST00000372844.3|HPCAL4|ENSG00000116983.8|hippocalcin like 4
hg19_v2_chr8_-_144897549_144897549	0.118816	GLI2	ENST00000356994.2|SCRIB|ENSG00000180900.12|scribbled planar cell polarity protein 	ENST00000320476.3|SCRIB|ENSG00000180900.12|scribbled planar cell polarity protein
hg19_v2_chr22_-_20255212_20255212	0.118753	GLI2	ENST00000416372.1|RTN4R|ENSG00000040608.9|reticulon 4 receptor
hg19_v2_chr15_+_81591757_81591780	0.118224	GLI2	ENST00000558332.1|IL16|ENSG00000172349.12|interleukin 16
hg19_v2_chr9_+_93589734_93589770	0.118053	GLI2	ENST00000375746.1|SYK|ENSG00000165025.10|spleen tyrosine kinase
hg19_v2_chr22_+_39410287_39410368	0.117348	GLI2	ENST00000381568.4|APOBEC3D|ENSG00000243811.3|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D
hg19_v2_chr2_+_192110199_192110254	0.117314	GLI2	ENST00000304164.4|MYO1B|ENSG00000128641.13|myosin IB
hg19_v2_chr1_-_110283138_110283138	0.117293	GLI2	ENST00000256594.3|GSTM3|ENSG00000134202.6|glutathione S-transferase mu 3 (brain)
hg19_v2_chr2_-_136875712_136875735	0.116258	GLI2	ENST00000241393.3|CXCR4|ENSG00000121966.6|chemokine (C-X-C motif) receptor 4
hg19_v2_chr10_-_46970573_46970610	0.115818	GLI2	ENST00000374325.3|SYT15|ENSG00000204176.9|synaptotagmin XV
hg19_v2_chr3_-_118753626_118753650	0.115489	GLI2	ENST00000489689.1|IGSF11|ENSG00000144847.8|immunoglobulin superfamily, member 11
hg19_v2_chr9_-_139927462_139927508	0.114569	GLI2	ENST00000314412.6|FUT7|ENSG00000180549.7|fucosyltransferase 7 (alpha (1,3) fucosyltransferase)
hg19_v2_chr3_-_118753716_118753735	0.113865	GLI2	ENST00000393775.2|IGSF11|ENSG00000144847.8|immunoglobulin superfamily, member 11
hg19_v2_chrX_-_51812268_51812368	0.113268	GLI2	ENST00000486010.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000497164.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000360134.6|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000485287.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000335504.5|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B 	ENST00000431659.1|MAGED4B|ENSG00000187243.12|melanoma antigen family D, 4B
hg19_v2_chr19_+_58790314_58790358	0.113053	GLI2	ENST00000196548.5|ZNF8|ENSG00000083842.8|Zinc finger protein 8  	ENST00000608843.1|ZNF8|ENSG00000273439.1|zinc finger protein 8
hg19_v2_chr22_+_33197683_33197698	0.112984	GLI2	ENST00000266085.6|TIMP3|ENSG00000100234.11|TIMP metallopeptidase inhibitor 3
hg19_v2_chr16_+_23194033_23194045	0.112307	GLI2	ENST00000300061.2|SCNN1G|ENSG00000166828.2|sodium channel, non-voltage-gated 1, gamma subunit
hg19_v2_chr3_+_111260856_111260948	0.111293	GLI2	ENST00000352690.4|CD96|ENSG00000153283.8|CD96 molecule
hg19_v2_chr10_+_105156364_105156448	0.111077	GLI2	ENST00000369797.3|PDCD11|ENSG00000148843.9|programmed cell death 11
hg19_v2_chr17_+_1944790_1944828	0.110603	GLI2	ENST00000575162.1|DPH1|ENSG00000108963.13|diphthamide biosynthesis 1
hg19_v2_chr4_-_5894777_5894799	0.110326	GLI2	ENST00000324989.7|CRMP1|ENSG00000072832.10|collapsin response mediator protein 1
hg19_v2_chr2_+_220379052_220379131	0.110127	GLI2	ENST00000347842.3|ASIC4|ENSG00000072182.8|acid-sensing (proton-gated) ion channel family member 4 	ENST00000358078.4|ASIC4|ENSG00000072182.8|acid-sensing (proton-gated) ion channel family member 4
hg19_v2_chr1_+_93646238_93646298	0.110071	GLI2	ENST00000448243.1|CCDC18|ENSG00000122483.13|coiled-coil domain containing 18 	ENST00000370276.1|CCDC18|ENSG00000122483.13|coiled-coil domain containing 18
hg19_v2_chr1_+_171060018_171060060	0.109681	GLI2	ENST00000367755.4|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3 	ENST00000392085.2|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3 	ENST00000542847.1|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3 	ENST00000538429.1|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3 	ENST00000479749.1|FMO3|ENSG00000007933.8|flavin containing monooxygenase 3
hg19_v2_chr2_-_112237835_112237844	0.109614	GLI2	ENST00000442293.1|MIR4435-1HG|ENSG00000172965.10|MIR4435-1 host gene (non-protein coding) 	ENST00000439494.1|MIR4435-1HG|ENSG00000172965.10|MIR4435-1 host gene (non-protein coding)
hg19_v2_chr4_-_90758227_90758379	0.109556	GLI2	ENST00000506691.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394986.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000506244.1|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394989.2|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor) 	ENST00000394991.3|SNCA|ENSG00000145335.11|synuclein, alpha (non A4 component of amyloid precursor)
hg19_v2_chr5_+_67088974_67089048	0.109413	GLI2	ENST00000513234.1|RP11-434D9.1|ENSG00000249364.1|RP11-434D9.1	ENST00000504068.1|RP11-434D9.1|ENSG00000249364.1|RP11-434D9.1	ENST00000515227.1|RP11-434D9.1|ENSG00000249364.1|RP11-434D9.1
hg19_v2_chr22_-_21482046_21482046	0.108933	GLI2	ENST00000419447.1|POM121L7|ENSG00000239511.1|POM121 transmembrane nucleoporin-like 7
hg19_v2_chrX_-_52546033_52546033	0.108591	GLI2	ENST00000375567.3|XAGE1E|ENSG00000204375.5|X antigen family, member 1E
hg19_v2_chr15_+_91478493_91478551	0.108454	GLI2	ENST00000418476.2|UNC45A|ENSG00000140553.12|unc-45 homolog A (C. elegans)
hg19_v2_chr2_+_85132749_85132788	0.108411	GLI2	ENST00000233143.4|TMSB10|ENSG00000034510.4|thymosin beta 10
hg19_v2_chr1_+_64058939_64058965	0.107778	GLI2	ENST00000371084.3|PGM1|ENSG00000079739.11|phosphoglucomutase 1
hg19_v2_chr5_-_132113559_132113579	0.107764	GLI2	ENST00000448933.1|SEPT8|ENSG00000164402.9|septin 8
hg19_v2_chr12_+_52282001_52282021	0.107243	GLI2	ENST00000340970.4|ANKRD33|ENSG00000167612.8|ankyrin repeat domain 33
hg19_v2_chr5_+_161495038_161495056	0.107232	GLI2	ENST00000393933.4|GABRG2|ENSG00000113327.10|gamma-aminobutyric acid (GABA) A receptor, gamma 2
hg19_v2_chr1_-_2564423_2564437	0.107077	GLI2	ENST00000378412.3|MMEL1|ENSG00000142606.11|membrane metallo-endopeptidase-like 1
hg19_v2_chr3_+_11314099_11314122	0.106908	GLI2	ENST00000446450.2|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354956.5|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000354449.3|ATG7|ENSG00000197548.8|autophagy related 7 	ENST00000419112.1|ATG7|ENSG00000197548.8|autophagy related 7
hg19_v2_chr21_+_35014783_35014816	0.106704	GLI2	ENST00000381291.4|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000381285.4|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399367.3|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399352.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399355.2|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein) 	ENST00000399349.1|ITSN1|ENSG00000205726.9|intersectin 1 (SH3 domain protein)
hg19_v2_chr19_+_40973049_40973126	0.106542	GLI2	ENST00000598249.1|SPTBN4|ENSG00000160460.11|spectrin, beta, non-erythrocytic 4 	ENST00000338932.3|SPTBN4|ENSG00000160460.11|spectrin, beta, non-erythrocytic 4 	ENST00000344104.3|SPTBN4|ENSG00000160460.11|spectrin, beta, non-erythrocytic 4
hg19_v2_chr8_-_101157680_101157680	0.106401	GLI2	ENST00000428847.2|FBXO43|ENSG00000156509.9|F-box protein 43
hg19_v2_chrX_+_19373700_19373845	0.106328	GLI2	ENST00000379804.1|PDHA1|ENSG00000131828.9|pyruvate dehydrogenase (lipoamide) alpha 1
hg19_v2_chr22_+_20008595_20008644	0.106242	GLI2	ENST00000398042.2|TANGO2|ENSG00000183597.11|transport and golgi organization 2 homolog (Drosophila) 	ENST00000450664.1|TANGO2|ENSG00000183597.11|transport and golgi organization 2 homolog (Drosophila) 	ENST00000327374.4|TANGO2|ENSG00000183597.11|transport and golgi organization 2 homolog (Drosophila) 	ENST00000432883.1|TANGO2|ENSG00000183597.11|transport and golgi organization 2 homolog (Drosophila)
hg19_v2_chr11_+_20409070_20409164	0.106176	GLI2	ENST00000331079.6|PRMT3|ENSG00000185238.8|protein arginine methyltransferase 3
hg19_v2_chr4_+_56815102_56815147	0.1051	GLI2	ENST00000257287.4|CEP135|ENSG00000174799.6|centrosomal protein 135kDa
hg19_v2_chr4_+_8271471_8271504	0.104745	GLI2	ENST00000307358.2|HTRA3|ENSG00000170801.5|HtrA serine peptidase 3 	ENST00000382512.3|HTRA3|ENSG00000170801.5|HtrA serine peptidase 3
hg19_v2_chr18_+_56807096_56807175	0.104733	GLI2	ENST00000588875.1|SEC11C|ENSG00000166562.4|SEC11 homolog C (S. cerevisiae)
hg19_v2_chr5_-_132299313_132299334	0.10453	GLI2	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr1_+_64059332_64059480	0.104507	GLI2	ENST00000540265.1|PGM1|ENSG00000079739.11|phosphoglucomutase 1
hg19_v2_chr9_+_139247484_139247509	0.104411	GLI2	ENST00000429455.1|GPSM1|ENSG00000160360.7|G-protein signaling modulator 1
hg19_v2_chr17_+_7323634_7323679	0.104325	GLI2	ENST00000323675.3|SPEM1|ENSG00000181323.7|spermatid maturation 1
hg19_v2_chr2_-_100759037_100759058	0.10427	GLI2	ENST00000317233.4|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3 	ENST00000423966.1|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3 	ENST00000416492.1|AFF3|ENSG00000144218.14|AF4/FMR2 family, member 3
hg19_v2_chr19_-_7939319_7939358	0.1038	GLI2	ENST00000539422.1|CTD-3193O13.9|ENSG00000183248.7|Protein FLJ22184
hg19_v2_chr17_-_7307358_7307456	0.103208	GLI2	ENST00000576017.1|TMEM256|ENSG00000205544.3|transmembrane protein 256 	ENST00000535512.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000302422.3|TMEM256|ENSG00000205544.3|transmembrane protein 256
hg19_v2_chr12_+_52281744_52281902	0.102988	GLI2	ENST00000301190.6|ANKRD33|ENSG00000167612.8|ankyrin repeat domain 33 	ENST00000538991.1|ANKRD33|ENSG00000167612.8|ankyrin repeat domain 33
hg19_v2_chr15_-_31453157_31453308	0.102893	GLI2	ENST00000559177.1|TRPM1|ENSG00000134160.9|transient receptor potential cation channel, subfamily M, member 1 	ENST00000558445.1|TRPM1|ENSG00000134160.9|transient receptor potential cation channel, subfamily M, member 1
hg19_v2_chr17_-_7297833_7297889	0.10258	GLI2	ENST00000571802.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000576201.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000573213.1|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate) 	ENST00000324822.11|TMEM256-PLSCR3|ENSG00000187838.12|TMEM256-PLSCR3 readthrough (NMD candidate)
hg19_v2_chr9_+_841690_841702	0.102044	GLI2	ENST00000382276.3|DMRT1|ENSG00000137090.7|doublesex and mab-3 related transcription factor 1
hg19_v2_chr12_+_6494285_6494419	0.101556	GLI2	ENST00000541102.1|LTBR|ENSG00000111321.6|lymphotoxin beta receptor (TNFR superfamily, member 3)
hg19_v2_chr15_+_90792760_90792767	0.10068	GLI2	ENST00000339615.5|TTLL13|ENSG00000213471.4|tubulin tyrosine ligase-like family, member 13 	ENST00000438251.1|TTLL13|ENSG00000213471.4|tubulin tyrosine ligase-like family, member 13
hg19_v2_chr17_+_80009741_80009834	0.100582	GLI2	ENST00000578552.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000320548.4|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000581578.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000583885.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000583641.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000581418.1|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000355130.2|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000306823.6|GPS1|ENSG00000169727.8|G protein pathway suppressor 1 	ENST00000392358.2|GPS1|ENSG00000169727.8|G protein pathway suppressor 1
hg19_v2_chr1_+_225117350_225117409	0.100005	GLI2	ENST00000413949.2|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14 	ENST00000430092.1|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14 	ENST00000366850.3|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14 	ENST00000400952.3|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14 	ENST00000366849.1|DNAH14|ENSG00000185842.10|dynein, axonemal, heavy chain 14
hg19_v2_chr19_+_572543_572579	0.099881	GLI2	ENST00000333511.3|BSG|ENSG00000172270.14|basigin (Ok blood group) 	ENST00000573216.1|BSG|ENSG00000172270.14|basigin (Ok blood group) 	ENST00000353555.4|BSG|ENSG00000172270.14|basigin (Ok blood group)
hg19_v2_chr7_-_75452673_75452691	0.099276	GLI2	ENST00000416943.1|CCL24|ENSG00000106178.2|chemokine (C-C motif) ligand 24
hg19_v2_chr16_+_30075595_30075636	0.0991099	GLI2	ENST00000563060.2|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate
hg19_v2_chr17_-_39203519_39203568	0.0990973	GLI2	ENST00000542137.1|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1 	ENST00000391419.3|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1
hg19_v2_chr19_+_45445491_45445513	0.0989295	GLI2	ENST00000592954.1|APOC4|ENSG00000267467.2|apolipoprotein C-IV 	ENST00000419266.2|APOC4|ENSG00000267467.2|apolipoprotein C-IV 	ENST00000589057.1|APOC4-APOC2|ENSG00000224916.4|APOC4-APOC2 readthrough (NMD candidate)
hg19_v2_chr8_-_41655107_41655159	0.0988469	GLI2	ENST00000347528.4|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000289734.7|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000379758.2|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000396945.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000396942.1|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic 	ENST00000352337.4|ANK1|ENSG00000029534.15|ankyrin 1, erythrocytic
hg19_v2_chr19_-_53757941_53758088	0.0988163	GLI2	ENST00000594517.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000601413.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000594681.1|ZNF677|ENSG00000197928.6|zinc finger protein 677
hg19_v2_chr12_+_5541267_5541285	0.0986643	GLI2	ENST00000423158.3|NTF3|ENSG00000185652.7|neurotrophin 3
hg19_v2_chr3_+_50606577_50606628	0.0971947	GLI2	ENST00000434410.1|HEMK1|ENSG00000114735.5|HemK methyltransferase family member 1 	ENST00000232854.4|HEMK1|ENSG00000114735.5|HemK methyltransferase family member 1
hg19_v2_chr19_-_2051223_2051252	0.0971486	GLI2	ENST00000309340.7|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2 	ENST00000589534.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2 	ENST00000250896.3|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2 	ENST00000589509.1|MKNK2|ENSG00000099875.10|MAP kinase interacting serine/threonine kinase 2
hg19_v2_chr11_+_64358110_64358116	0.0971303	GLI2	ENST00000377567.2|SLC22A12|ENSG00000197891.7|solute carrier family 22 (organic anion/urate transporter), member 12
hg19_v2_chr16_+_50059125_50059180	0.0970635	GLI2	ENST00000427478.2|CNEP1R1|ENSG00000205423.7|CTD nuclear envelope phosphatase 1 regulatory subunit 1
hg19_v2_chr1_+_244998918_244998975	0.0966667	GLI2	ENST00000366528.3|COX20|ENSG00000203667.5|COX20 cytochrome C oxidase assembly factor
hg19_v2_chrX_+_117480036_117480139	0.0965457	GLI2	ENST00000371822.5|WDR44|ENSG00000131725.9|WD repeat domain 44 	ENST00000254029.3|WDR44|ENSG00000131725.9|WD repeat domain 44 	ENST00000371825.3|WDR44|ENSG00000131725.9|WD repeat domain 44
hg19_v2_chr6_-_53213780_53213947	0.0964694	GLI2	ENST00000304434.6|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5 	ENST00000370918.4|ELOVL5|ENSG00000012660.9|ELOVL fatty acid elongase 5
hg19_v2_chr1_-_153599426_153599524	0.0955631	GLI2	ENST00000392622.1|S100A13|ENSG00000189171.9|S100 calcium binding protein A13
hg19_v2_chr3_+_44626446_44626477	0.0954795	GLI2	ENST00000441021.1|ZNF660|ENSG00000144792.5|zinc finger protein 660 	ENST00000322734.2|ZNF660|ENSG00000144792.5|zinc finger protein 660
hg19_v2_chrX_+_12809463_12809607	0.095093	GLI2	ENST00000380663.3|PRPS2|ENSG00000101911.8|phosphoribosyl pyrophosphate synthetase 2 	ENST00000380668.5|PRPS2|ENSG00000101911.8|phosphoribosyl pyrophosphate synthetase 2 	ENST00000398491.2|PRPS2|ENSG00000101911.8|phosphoribosyl pyrophosphate synthetase 2 	ENST00000489404.1|PRPS2|ENSG00000101911.8|phosphoribosyl pyrophosphate synthetase 2
hg19_v2_chr5_-_179050066_179050170	0.0950128	GLI2	ENST00000329433.6|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000510411.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H)
hg19_v2_chr5_+_152870106_152870188	0.0942944	GLI2	ENST00000285900.5|GRIA1|ENSG00000155511.13|glutamate receptor, ionotropic, AMPA 1
hg19_v2_chr16_-_2059797_2059837	0.0940322	GLI2	ENST00000563630.1|ZNF598|ENSG00000167962.8|zinc finger protein 598
hg19_v2_chr15_+_75315896_75315956	0.093867	GLI2	ENST00000342932.3|PPCDC|ENSG00000138621.7|phosphopantothenoylcysteine decarboxylase 	ENST00000564923.1|PPCDC|ENSG00000138621.7|phosphopantothenoylcysteine decarboxylase 	ENST00000569562.1|PPCDC|ENSG00000138621.7|phosphopantothenoylcysteine decarboxylase 	ENST00000568649.1|PPCDC|ENSG00000138621.7|phosphopantothenoylcysteine decarboxylase
hg19_v2_chr20_+_35202909_35203075	0.0938266	GLI2	ENST00000558530.1|TGIF2-C20orf24|ENSG00000259399.1|TGIF2-C20orf24 readthrough 	ENST00000558028.1|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2 	ENST00000560025.1|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2
hg19_v2_chr9_+_35042205_35042266	0.0935849	GLI2	ENST00000312292.5|C9orf131|ENSG00000174038.8|chromosome 9 open reading frame 131 	ENST00000378745.3|C9orf131|ENSG00000174038.8|chromosome 9 open reading frame 131
hg19_v2_chr19_+_10982189_10982272	0.0935673	GLI2	ENST00000327064.4|CARM1|ENSG00000142453.7|coactivator-associated arginine methyltransferase 1 	ENST00000588947.1|CARM1|ENSG00000142453.7|coactivator-associated arginine methyltransferase 1
hg19_v2_chr1_-_95285652_95285719	0.0935284	GLI2	ENST00000442418.1|LINC01057|ENSG00000224081.3|long intergenic non-protein coding RNA 1057
hg19_v2_chr18_+_77794446_77794505	0.0928858	GLI2	ENST00000262197.7|RBFA|ENSG00000101546.8|ribosome binding factor A (putative)
hg19_v2_chr10_+_105315102_105315137	0.0928669	GLI2	ENST00000369777.2|NEURL|ENSG00000107954.6|neuralized E3 ubiquitin protein ligase 1
hg19_v2_chr2_+_241564655_241564668	0.0926589	GLI2	ENST00000407714.1|GPR35|ENSG00000178623.7|G protein-coupled receptor 35
hg19_v2_chrX_+_51927919_51927991	0.0924927	GLI2	ENST00000416960.1|MAGED4|ENSG00000154545.12|melanoma antigen family D, 4
hg19_v2_chr3_+_160939050_160939116	0.0923439	GLI2	ENST00000493066.1|NMD3|ENSG00000169251.8|NMD3 ribosome export adaptor 	ENST00000351193.2|NMD3|ENSG00000169251.8|NMD3 ribosome export adaptor 	ENST00000472947.1|NMD3|ENSG00000169251.8|NMD3 ribosome export adaptor 	ENST00000463518.1|NMD3|ENSG00000169251.8|NMD3 ribosome export adaptor
hg19_v2_chr22_-_21482352_21482352	0.0920299	GLI2	ENST00000329949.3|POM121L7|ENSG00000239511.1|POM121 transmembrane nucleoporin-like 7
hg19_v2_chr6_+_142468361_142468382	0.091668	GLI2	ENST00000367630.4|VTA1|ENSG00000009844.11|vesicle (multivesicular body) trafficking 1
hg19_v2_chr19_-_51512804_51512837	0.0915196	GLI2	ENST00000594211.1|KLK9|ENSG00000213022.4|kallikrein-related peptidase 9 	ENST00000376832.4|KLK9|ENSG00000213022.4|kallikrein-related peptidase 9
hg19_v2_chr1_-_47697387_47697457	0.0914216	GLI2	ENST00000371884.2|TAL1|ENSG00000162367.7|T-cell acute lymphocytic leukemia 1
hg19_v2_chr10_-_43904235_43904330	0.0907343	GLI2	ENST00000356053.3|HNRNPF|ENSG00000169813.12|heterogeneous nuclear ribonucleoprotein F
hg19_v2_chr3_-_49066811_49066851	0.0906186	GLI2	ENST00000442157.1|IMPDH2|ENSG00000178035.7|IMP (inosine 5'-monophosphate) dehydrogenase 2 	ENST00000326739.4|IMPDH2|ENSG00000178035.7|IMP (inosine 5'-monophosphate) dehydrogenase 2
hg19_v2_chr3_+_50606901_50606967	0.0904382	GLI2	ENST00000455834.1|HEMK1|ENSG00000114735.5|HemK methyltransferase family member 1
hg19_v2_chr16_-_2059748_2059777	0.0902234	GLI2	ENST00000562103.1|ZNF598|ENSG00000167962.8|zinc finger protein 598 	ENST00000431526.1|ZNF598|ENSG00000167962.8|zinc finger protein 598
hg19_v2_chr17_-_7155274_7155400	0.0884827	GLI2	ENST00000318988.6|CTDNEP1|ENSG00000175826.7|CTD nuclear envelope phosphatase 1 	ENST00000575783.1|CTDNEP1|ENSG00000175826.7|CTD nuclear envelope phosphatase 1 	ENST00000573600.1|CTDNEP1|ENSG00000175826.7|CTD nuclear envelope phosphatase 1
hg19_v2_chr11_+_117103441_117103452	0.0882241	GLI2	ENST00000531287.1|RNF214|ENSG00000167257.6|ring finger protein 214 	ENST00000531452.1|RNF214|ENSG00000167257.6|ring finger protein 214
hg19_v2_chr1_-_153599732_153599803	0.088222	GLI2	ENST00000392623.1|S100A13|ENSG00000189171.9|S100 calcium binding protein A13
hg19_v2_chr9_-_71155783_71155800	0.0879888	GLI2	ENST00000377311.3|TMEM252|ENSG00000181778.4|transmembrane protein 252
hg19_v2_chr8_-_134584092_134584143	0.0877448	GLI2	ENST00000522652.1|ST3GAL1|ENSG00000008513.10|ST3 beta-galactoside alpha-2,3-sialyltransferase 1
hg19_v2_chr5_+_152870287_152870376	0.0875071	GLI2	ENST00000340592.5|GRIA1|ENSG00000155511.13|glutamate receptor, ionotropic, AMPA 1
hg19_v2_chr20_+_36974759_36974892	0.087287	GLI2	ENST00000217407.2|LBP|ENSG00000129988.5|lipopolysaccharide binding protein
hg19_v2_chr21_-_46964306_46964332	0.0868559	GLI2	ENST00000443742.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1 	ENST00000528477.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1 	ENST00000567670.1|SLC19A1|ENSG00000173638.14|solute carrier family 19 (folate transporter), member 1
hg19_v2_chr12_+_132568814_132569025	0.0866353	GLI2	ENST00000454179.2|EP400NL|ENSG00000185684.8|EP400 N-terminal like 	ENST00000389560.2|EP400NL|ENSG00000185684.8|EP400 N-terminal like 	ENST00000443539.2|EP400NL|ENSG00000185684.8|EP400 N-terminal like 	ENST00000392352.1|EP400NL|ENSG00000185684.8|EP400 N-terminal like
hg19_v2_chr16_+_1730338_1730369	0.0864568	GLI2	ENST00000566691.1|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like 	ENST00000382710.4|HN1L|ENSG00000206053.8|hematological and neurological expressed 1-like
hg19_v2_chr8_+_11561660_11561751	0.0864512	GLI2	ENST00000526716.1|GATA4|ENSG00000136574.13|GATA binding protein 4 	ENST00000335135.4|GATA4|ENSG00000136574.13|GATA binding protein 4 	ENST00000528027.1|GATA4|ENSG00000136574.13|GATA binding protein 4
hg19_v2_chr8_-_134584152_134584213	0.0860623	GLI2	ENST00000521180.1|ST3GAL1|ENSG00000008513.10|ST3 beta-galactoside alpha-2,3-sialyltransferase 1 	ENST00000517668.1|ST3GAL1|ENSG00000008513.10|ST3 beta-galactoside alpha-2,3-sialyltransferase 1 	ENST00000319914.5|ST3GAL1|ENSG00000008513.10|ST3 beta-galactoside alpha-2,3-sialyltransferase 1
hg19_v2_chr2_+_87769459_87769476	0.085978	GLI2	ENST00000414030.1|LINC00152|ENSG00000222041.6|long intergenic non-protein coding RNA 152 	ENST00000437561.1|LINC00152|ENSG00000222041.6|long intergenic non-protein coding RNA 152
hg19_v2_chr8_+_42010464_42010662	0.0859752	GLI2	ENST00000518421.1|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000174653.3|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000396926.3|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000521280.1|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit 	ENST00000522288.1|AP3M2|ENSG00000070718.7|adaptor-related protein complex 3, mu 2 subunit
hg19_v2_chr14_+_79745682_79745704	0.0859177	GLI2	ENST00000557594.1|NRXN3|ENSG00000021645.13|neurexin 3
hg19_v2_chr19_+_45582453_45582551	0.0858545	GLI2	ENST00000591607.1|GEMIN7|ENSG00000142252.6|gem (nuclear organelle) associated protein 7 	ENST00000591747.1|GEMIN7|ENSG00000142252.6|gem (nuclear organelle) associated protein 7 	ENST00000270257.4|GEMIN7|ENSG00000142252.6|gem (nuclear organelle) associated protein 7 	ENST00000391951.2|GEMIN7|ENSG00000142252.6|gem (nuclear organelle) associated protein 7 	ENST00000587566.1|MARK4|ENSG00000007047.10|MAP/microtubule affinity-regulating kinase 4
hg19_v2_chr2_+_219283815_219283853	0.0858021	GLI2	ENST00000248444.5|VIL1|ENSG00000127831.6|villin 1 	ENST00000454069.1|VIL1|ENSG00000127831.6|villin 1 	ENST00000392114.2|VIL1|ENSG00000127831.6|villin 1
hg19_v2_chr2_-_70475730_70475798	0.0857501	GLI2	ENST00000445587.1|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000433529.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein 	ENST00000415783.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr19_-_46142637_46142678	0.0856238	GLI2	ENST00000590043.1|EML2|ENSG00000125746.10|echinoderm microtubule associated protein like 2 	ENST00000589876.1|EML2|ENSG00000125746.10|echinoderm microtubule associated protein like 2
hg19_v2_chr5_+_70196805_70196821	0.0855948	GLI2	ENST00000507348.1|SERF1A|ENSG00000172058.11|small EDRK-rich factor 1A (telomeric) 	ENST00000512868.2|SERF1A|ENSG00000172058.11|small EDRK-rich factor 1A (telomeric) 	ENST00000512649.1|SERF1A|ENSG00000172058.11|small EDRK-rich factor 1A (telomeric)
hg19_v2_chrX_+_49091920_49091942	0.085433	GLI2	ENST00000376227.3|CCDC22|ENSG00000101997.8|coiled-coil domain containing 22
hg19_v2_chr11_-_2906979_2907111	0.0851561	GLI2	ENST00000380725.1|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000313407.6|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000430149.2|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000440480.2|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000414822.3|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2)
hg19_v2_chr14_-_23058063_23058175	0.0848546	GLI2	ENST00000538631.1|DAD1|ENSG00000129562.6|defender against cell death 1 	ENST00000543337.1|DAD1|ENSG00000129562.6|defender against cell death 1 	ENST00000250498.4|DAD1|ENSG00000129562.6|defender against cell death 1
hg19_v2_chr12_-_82153087_82153138	0.0847576	GLI2	ENST00000547623.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000549396.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr7_+_99971129_99971167	0.0846812	GLI2	ENST00000394000.2|PILRA|ENSG00000085514.11|paired immunoglobin-like type 2 receptor alpha 	ENST00000350573.2|PILRA|ENSG00000085514.11|paired immunoglobin-like type 2 receptor alpha
hg19_v2_chr12_+_7079944_7079999	0.0846498	GLI2	ENST00000261406.6|EMG1|ENSG00000126749.10|EMG1 N1-specific pseudouridine methyltransferase
hg19_v2_chr14_-_37051798_37051831	0.0838392	GLI2	ENST00000258829.5|NKX2-8|ENSG00000136327.6|NK2 homeobox 8
hg19_v2_chr5_+_82373379_82373444	0.0831815	GLI2	ENST00000396027.4|XRCC4|ENSG00000152422.11|X-ray repair complementing defective repair in Chinese hamster cells 4 	ENST00000511817.1|XRCC4|ENSG00000152422.11|X-ray repair complementing defective repair in Chinese hamster cells 4
hg19_v2_chr2_+_183989157_183989179	0.0830919	GLI2	ENST00000541912.1|NUP35|ENSG00000163002.8|nucleoporin 35kDa
hg19_v2_chrX_-_7066159_7066231	0.082887	GLI2	ENST00000486446.2|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1 	ENST00000412827.2|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1 	ENST00000424830.2|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1 	ENST00000381077.5|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1 	ENST00000540122.1|HDHD1|ENSG00000130021.9|haloacid dehalogenase-like hydrolase domain containing 1
hg19_v2_chr16_+_30075783_30075818	0.0823395	GLI2	ENST00000412304.2|ALDOA|ENSG00000149925.12|aldolase A, fructose-bisphosphate
hg19_v2_chr4_-_71705590_71705662	0.0816713	GLI2	ENST00000254799.6|GRSF1|ENSG00000132463.9|G-rich RNA sequence binding factor 1
hg19_v2_chr17_-_26684473_26684571	0.0813847	GLI2	ENST00000540200.1|POLDIP2|ENSG00000004142.7|polymerase (DNA-directed), delta interacting protein 2
hg19_v2_chr16_+_25078208_25078258	0.081281	GLI2	ENST00000571219.1|RP11-266L9.5|ENSG00000262155.1|RP11-266L9.5
hg19_v2_chr16_-_22385901_22385947	0.0807171	GLI2	ENST00000268383.2|CDR2|ENSG00000140743.3|cerebellar degeneration-related protein 2, 62kDa
hg19_v2_chr3_-_155524049_155524140	0.0806	GLI2	ENST00000534941.1|C3orf33|ENSG00000174928.11|chromosome 3 open reading frame 33 	ENST00000340171.2|C3orf33|ENSG00000174928.11|chromosome 3 open reading frame 33
hg19_v2_chr7_-_150779995_150780319	0.080516	GLI2	ENST00000462940.1|TMUB1|ENSG00000164897.8|transmembrane and ubiquitin-like domain containing 1 	ENST00000492838.1|TMUB1|ENSG00000164897.8|transmembrane and ubiquitin-like domain containing 1 	ENST00000392818.3|TMUB1|ENSG00000164897.8|transmembrane and ubiquitin-like domain containing 1 	ENST00000488752.1|TMUB1|ENSG00000164897.8|transmembrane and ubiquitin-like domain containing 1 	ENST00000476627.1|TMUB1|ENSG00000164897.8|transmembrane and ubiquitin-like domain containing 1
hg19_v2_chr19_-_6481776_6481819	0.0804078	GLI2	ENST00000543576.1|DENND1C|ENSG00000205744.5|DENN/MADD domain containing 1C 	ENST00000590173.1|DENND1C|ENSG00000205744.5|DENN/MADD domain containing 1C 	ENST00000381480.2|DENND1C|ENSG00000205744.5|DENN/MADD domain containing 1C
hg19_v2_chr17_-_54991395_54991453	0.0802839	GLI2	ENST00000316881.4|TRIM25|ENSG00000121060.10|tripartite motif containing 25
hg19_v2_chr11_+_14665373_14665380	0.0800761	GLI2	ENST00000455098.2|PDE3B|ENSG00000152270.4|phosphodiesterase 3B, cGMP-inhibited
hg19_v2_chr1_-_41487415_41487426	0.0797962	GLI2	ENST00000372611.1|SLFNL1|ENSG00000171790.11|schlafen-like 1
hg19_v2_chr2_+_183989083_183989151	0.0795244	GLI2	ENST00000295119.4|NUP35|ENSG00000163002.8|nucleoporin 35kDa
hg19_v2_chr15_+_40531621_40531719	0.0792106	GLI2	ENST00000560346.1|PAK6|ENSG00000137843.7|p21 protein (Cdc42/Rac)-activated kinase 6
hg19_v2_chr20_-_749121_749152	0.0791716	GLI2	ENST00000217254.7|SLC52A3|ENSG00000101276.10|solute carrier family 52 (riboflavin transporter), member 3 	ENST00000381944.3|SLC52A3|ENSG00000101276.10|solute carrier family 52 (riboflavin transporter), member 3
hg19_v2_chr10_+_133918175_133918175	0.0789764	GLI2	ENST00000298622.4|JAKMIP3|ENSG00000188385.7|Janus kinase and microtubule interacting protein 3
hg19_v2_chr11_-_3078616_3078667	0.0787457	GLI2	ENST00000401769.3|CARS|ENSG00000110619.12|cysteinyl-tRNA synthetase 	ENST00000278224.9|CARS|ENSG00000110619.12|cysteinyl-tRNA synthetase 	ENST00000397114.3|CARS|ENSG00000110619.12|cysteinyl-tRNA synthetase 	ENST00000380525.4|CARS|ENSG00000110619.12|cysteinyl-tRNA synthetase
hg19_v2_chr18_+_77794358_77794418	0.0786912	GLI2	ENST00000306735.5|RBFA|ENSG00000101546.8|ribosome binding factor A (putative)
hg19_v2_chr11_-_62783303_62783320	0.078556	GLI2	ENST00000336232.2|SLC22A8|ENSG00000149452.11|solute carrier family 22 (organic anion transporter), member 8 	ENST00000430500.2|SLC22A8|ENSG00000149452.11|solute carrier family 22 (organic anion transporter), member 8
hg19_v2_chr5_+_140718396_140718539	0.0782542	GLI2	ENST00000394576.2|PCDHGA2|ENSG00000081853.13|protocadherin gamma subfamily A, 2
hg19_v2_chr15_-_31453359_31453476	0.0782445	GLI2	ENST00000542188.1|TRPM1|ENSG00000134160.9|transient receptor potential cation channel, subfamily M, member 1
hg19_v2_chr1_-_41487383_41487402	0.0779907	GLI2	ENST00000302946.8|SLFNL1|ENSG00000171790.11|schlafen-like 1 	ENST00000372613.2|SLFNL1|ENSG00000171790.11|schlafen-like 1 	ENST00000439569.2|SLFNL1|ENSG00000171790.11|schlafen-like 1 	ENST00000397197.2|SLFNL1|ENSG00000171790.11|schlafen-like 1
hg19_v2_chr10_+_35894338_35894370	0.0775424	GLI2	ENST00000321660.1|GJD4|ENSG00000177291.3|gap junction protein, delta 4, 40.1kDa
hg19_v2_chr17_+_45331184_45331263	0.0769233	GLI2	ENST00000559488.1|ITGB3|ENSG00000259207.3|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 	ENST00000571680.1|ITGB3|ENSG00000259207.3|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 	ENST00000435993.2|ITGB3|ENSG00000259207.3|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
hg19_v2_chr10_+_76970509_76970606	0.0768554	GLI2	ENST00000332211.6|VDAC2|ENSG00000165637.9|voltage-dependent anion channel 2 	ENST00000535553.1|VDAC2|ENSG00000165637.9|voltage-dependent anion channel 2 	ENST00000313132.4|VDAC2|ENSG00000165637.9|voltage-dependent anion channel 2
hg19_v2_chr12_-_82152420_82152441	0.0768551	GLI2	ENST00000552948.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 	ENST00000548586.1|PPFIA2|ENSG00000139220.12|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
hg19_v2_chr19_-_42806723_42806795	0.0765861	GLI2	ENST00000262890.3|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chr20_-_33880204_33880234	0.0765219	GLI2	ENST00000374408.3|FAM83C|ENSG00000125998.7|family with sequence similarity 83, member C
hg19_v2_chr7_-_44180673_44180687	0.0765198	GLI2	ENST00000457314.1|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory 	ENST00000447951.1|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory 	ENST00000431007.1|MYL7|ENSG00000106631.4|myosin, light chain 7, regulatory
hg19_v2_chr14_+_50359773_50359850	0.0764714	GLI2	ENST00000298316.5|ARF6|ENSG00000165527.5|ADP-ribosylation factor 6
hg19_v2_chr1_-_2564450_2564481	0.0764573	GLI2	ENST00000288709.6|MMEL1|ENSG00000142606.11|membrane metallo-endopeptidase-like 1
hg19_v2_chr12_+_31226779_31226834	0.076394	GLI2	ENST00000542838.1|DDX11|ENSG00000013573.12|DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 	ENST00000407793.2|DDX11|ENSG00000013573.12|DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 	ENST00000251758.5|DDX11|ENSG00000013573.12|DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 	ENST00000228264.6|DDX11|ENSG00000013573.12|DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 	ENST00000438391.2|DDX11|ENSG00000013573.12|DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 	ENST00000415475.2|DDX11|ENSG00000013573.12|DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 	ENST00000545668.1|DDX11|ENSG00000013573.12|DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 	ENST00000350437.4|DDX11|ENSG00000013573.12|DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11
hg19_v2_chr22_+_39410088_39410088	0.0760417	GLI2	ENST00000361441.4|APOBEC3C|ENSG00000244509.3|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C
hg19_v2_chrX_+_103411189_103411301	0.0758006	GLI2	ENST00000493442.1|FAM199X|ENSG00000123575.8|family with sequence similarity 199, X-linked
hg19_v2_chr14_-_24615805_24615834	0.0756084	GLI2	ENST00000560410.1|PSME2|ENSG00000100911.9|proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
hg19_v2_chr10_-_75910789_75910821	0.0755964	GLI2	ENST00000355264.4|AP3M1|ENSG00000185009.8|adaptor-related protein complex 3, mu 1 subunit
hg19_v2_chr4_+_95128996_95129056	0.0753682	GLI2	ENST00000457823.2|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr19_-_49540073_49540152	0.07529	GLI2	ENST00000301407.7|CGB1|ENSG00000267631.3|chorionic gonadotropin, beta polypeptide 1 	ENST00000604577.1|CTB-60B18.6|ENSG00000267335.2|Choriogonadotropin subunit beta variant 1; Uncharacterized protein  	ENST00000591656.1|CTB-60B18.6|ENSG00000267335.2|Choriogonadotropin subunit beta variant 1; Uncharacterized protein  	ENST00000601167.1|CGB1|ENSG00000267631.3|chorionic gonadotropin, beta polypeptide 1
hg19_v2_chr11_-_12030629_12030644	0.0745902	GLI2	ENST00000396505.2|DKK3|ENSG00000050165.13|dickkopf WNT signaling pathway inhibitor 3
hg19_v2_chr2_+_233390863_233390878	0.0744186	GLI2	ENST00000449596.1|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle) 	ENST00000543200.1|CHRND|ENSG00000135902.5|cholinergic receptor, nicotinic, delta (muscle)
hg19_v2_chr3_-_38178527_38178632	0.0742722	GLI2	ENST00000544624.1|ACAA1|ENSG00000060971.13|acetyl-CoA acyltransferase 1 	ENST00000444607.2|ACAA1|ENSG00000060971.13|acetyl-CoA acyltransferase 1 	ENST00000450296.1|ACAA1|ENSG00000060971.13|acetyl-CoA acyltransferase 1
hg19_v2_chr5_+_82373317_82373375	0.0736297	GLI2	ENST00000282268.3|XRCC4|ENSG00000152422.11|X-ray repair complementing defective repair in Chinese hamster cells 4 	ENST00000338635.6|XRCC4|ENSG00000152422.11|X-ray repair complementing defective repair in Chinese hamster cells 4
hg19_v2_chr18_+_11751493_11751507	0.0734059	GLI2	ENST00000269162.5|GNAL|ENSG00000141404.11|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
hg19_v2_chr20_-_55100981_55100981	0.0733871	GLI2	ENST00000243913.4|GCNT7|ENSG00000124091.5|glucosaminyl (N-acetyl) transferase family member 7
hg19_v2_chr19_+_41860047_41860083	0.0729521	GLI2	ENST00000604123.1|TMEM91|ENSG00000142046.10|transmembrane protein 91
hg19_v2_chr3_-_185542761_185542813	0.0728876	GLI2	ENST00000457616.2|IGF2BP2|ENSG00000073792.11|insulin-like growth factor 2 mRNA binding protein 2 	ENST00000346192.3|IGF2BP2|ENSG00000073792.11|insulin-like growth factor 2 mRNA binding protein 2
hg19_v2_chr16_+_89989687_89989774	0.072849	GLI2	ENST00000315491.7|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain  	ENST00000555576.1|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain  	ENST00000554336.1|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain  	ENST00000553967.1|TUBB3|ENSG00000258947.2|Tubulin beta-3 chain
hg19_v2_chr12_-_110883346_110883392	0.0725516	GLI2	ENST00000547365.1|ARPC3|ENSG00000111229.11|actin related protein 2/3 complex, subunit 3, 21kDa
hg19_v2_chr7_-_95064264_95064510	0.0723473	GLI2	ENST00000536183.1|PON2|ENSG00000105854.8|paraoxonase 2 	ENST00000433091.2|PON2|ENSG00000105854.8|paraoxonase 2 	ENST00000222572.3|PON2|ENSG00000105854.8|paraoxonase 2
hg19_v2_chr5_+_161275320_161275450	0.0722305	GLI2	ENST00000437025.2|GABRA1|ENSG00000022355.10|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v2_chr2_-_73298802_73298965	0.0720576	GLI2	ENST00000411783.1|SFXN5|ENSG00000144040.8|sideroflexin 5 	ENST00000410065.1|SFXN5|ENSG00000144040.8|sideroflexin 5 	ENST00000442582.1|SFXN5|ENSG00000144040.8|sideroflexin 5 	ENST00000272433.2|SFXN5|ENSG00000144040.8|sideroflexin 5
hg19_v2_chr3_-_167813672_167813763	0.0720403	GLI2	ENST00000470487.1|GOLIM4|ENSG00000173905.4|golgi integral membrane protein 4
hg19_v2_chr17_-_60005365_60005377	0.0710134	GLI2	ENST00000444766.3|INTS2|ENSG00000108506.7|integrator complex subunit 2
hg19_v2_chr19_+_58962971_58963014	0.0709746	GLI2	ENST00000336614.4|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000545523.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000599194.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000598244.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000599193.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000594214.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B 	ENST00000391696.1|ZNF324B|ENSG00000249471.3|zinc finger protein 324B
hg19_v2_chr11_+_18230727_18230755	0.0709596	GLI2	ENST00000527059.1|RP11-113D6.10|ENSG00000189332.4|Putative mitochondrial carrier protein LOC494141
hg19_v2_chr1_-_16344500_16344568	0.0697979	GLI2	ENST00000406363.2|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular) 	ENST00000411503.1|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular) 	ENST00000545268.1|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular) 	ENST00000487046.1|HSPB7|ENSG00000173641.13|heat shock 27kDa protein family, member 7 (cardiovascular)
hg19_v2_chr10_+_14880287_14880345	0.0695147	GLI2	ENST00000437161.2|HSPA14|ENSG00000187522.9|heat shock 70kDa protein 14
hg19_v2_chr6_-_34073743_34073761	0.0694153	GLI2	ENST00000609222.1|GRM4|ENSG00000124493.9|glutamate receptor, metabotropic 4
hg19_v2_chr12_-_53715328_53715415	0.0694088	GLI2	ENST00000547757.1|AAAS|ENSG00000094914.8|achalasia, adrenocortical insufficiency, alacrimia 	ENST00000394384.3|AAAS|ENSG00000094914.8|achalasia, adrenocortical insufficiency, alacrimia 	ENST00000209873.4|AAAS|ENSG00000094914.8|achalasia, adrenocortical insufficiency, alacrimia
hg19_v2_chr5_+_169931009_169931065	0.0693466	GLI2	ENST00000328939.4|KCNIP1|ENSG00000182132.8|Kv channel interacting protein 1 	ENST00000390656.4|KCNIP1|ENSG00000182132.8|Kv channel interacting protein 1
hg19_v2_chr3_-_46759314_46759340	0.0691195	GLI2	ENST00000315170.7|PRSS50|ENSG00000206549.8|protease, serine, 50
hg19_v2_chr9_-_123555655_123555712	0.0691039	GLI2	ENST00000340778.5|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2 	ENST00000453291.1|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2 	ENST00000608872.1|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2
hg19_v2_chr17_-_35716019_35716079	0.069078	GLI2	ENST00000591148.1|ACACA|ENSG00000132142.15|acetyl-CoA carboxylase alpha 	ENST00000394406.2|ACACA|ENSG00000132142.15|acetyl-CoA carboxylase alpha 	ENST00000394403.1|ACACA|ENSG00000132142.15|acetyl-CoA carboxylase alpha
hg19_v2_chr18_-_60986962_60987019	0.0689197	GLI2	ENST00000333681.4|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr2_+_241544834_241544862	0.0688997	GLI2	ENST00000319838.5|GPR35|ENSG00000178623.7|G protein-coupled receptor 35 	ENST00000403859.1|GPR35|ENSG00000178623.7|G protein-coupled receptor 35 	ENST00000438013.2|GPR35|ENSG00000178623.7|G protein-coupled receptor 35
hg19_v2_chr6_+_142468383_142468421	0.0686833	GLI2	ENST00000367621.1|VTA1|ENSG00000009844.11|vesicle (multivesicular body) trafficking 1 	ENST00000452973.2|VTA1|ENSG00000009844.11|vesicle (multivesicular body) trafficking 1
hg19_v2_chr3_+_15468862_15468909	0.0686309	GLI2	ENST00000396842.2|EAF1|ENSG00000144597.9|ELL associated factor 1
hg19_v2_chr22_+_46731596_46731658	0.06827	GLI2	ENST00000381019.3|TRMU|ENSG00000100416.8|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
hg19_v2_chrX_-_120090454_120090454	0.0682334	GLI2	ENST00000434883.2|CT47A7|ENSG00000228517.2|cancer/testis antigen family 47, member A7
hg19_v2_chr12_+_123464607_123464873	0.0681674	GLI2	ENST00000543566.1|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000315580.5|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000542099.1|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000392435.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000413381.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000426960.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000453766.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4
hg19_v2_chr19_+_45445524_45445537	0.0680617	GLI2	ENST00000591600.1|APOC4|ENSG00000267467.2|apolipoprotein C-IV
hg19_v2_chr1_+_243419306_243419422	0.0679508	GLI2	ENST00000355875.4|SDCCAG8|ENSG00000054282.11|serologically defined colon cancer antigen 8 	ENST00000391846.1|SDCCAG8|ENSG00000054282.11|serologically defined colon cancer antigen 8 	ENST00000366541.3|SDCCAG8|ENSG00000054282.11|serologically defined colon cancer antigen 8 	ENST00000343783.6|SDCCAG8|ENSG00000054282.11|serologically defined colon cancer antigen 8
hg19_v2_chr12_-_9885702_9885717	0.0679418	GLI2	ENST00000542530.1|CLECL1|ENSG00000184293.3|C-type lectin-like 1
hg19_v2_chr14_+_22309368_22309422	0.0676074	GLI2	ENST00000390433.1|TRAV12-1|ENSG00000211785.1|T cell receptor alpha variable 12-1
hg19_v2_chr1_-_53608249_53608288	0.067251	GLI2	ENST00000371494.4|SLC1A7|ENSG00000162383.7|solute carrier family 1 (glutamate transporter), member 7
hg19_v2_chr19_-_6424783_6424805	0.0671876	GLI2	ENST00000398148.3|KHSRP|ENSG00000088247.11|KH-type splicing regulatory protein
hg19_v2_chr14_-_24615523_24615569	0.0671818	GLI2	ENST00000559056.1|PSME2|ENSG00000100911.9|proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
hg19_v2_chr3_+_42727011_42727034	0.0665775	GLI2	ENST00000287777.4|KLHL40|ENSG00000157119.11|kelch-like family member 40
hg19_v2_chr18_+_268148_268188	0.0663807	GLI2	ENST00000581677.1|RP11-705O1.8|ENSG00000263884.1|RP11-705O1.8
hg19_v2_chr9_+_88556036_88556101	0.0662317	GLI2	ENST00000361671.5|NAA35|ENSG00000135040.11|N(alpha)-acetyltransferase 35, NatC auxiliary subunit 	ENST00000416045.1|NAA35|ENSG00000135040.11|N(alpha)-acetyltransferase 35, NatC auxiliary subunit
hg19_v2_chr13_+_113760098_113760121	0.0661167	GLI2	ENST00000346342.3|F7|ENSG00000057593.9|coagulation factor VII (serum prothrombin conversion accelerator) 	ENST00000541084.1|F7|ENSG00000057593.9|coagulation factor VII (serum prothrombin conversion accelerator) 	ENST00000375581.3|F7|ENSG00000057593.9|coagulation factor VII (serum prothrombin conversion accelerator)
hg19_v2_chr5_+_150226085_150226085	0.0660654	GLI2	ENST00000522154.1|IRGM|ENSG00000237693.4|immunity-related GTPase family, M
hg19_v2_chr12_-_68553512_68553528	0.0647286	GLI2	ENST00000229135.3|IFNG|ENSG00000111537.4|interferon, gamma
hg19_v2_chr5_-_150284532_150284549	0.0645105	GLI2	ENST00000394226.2|ZNF300|ENSG00000145908.8|zinc finger protein 300 	ENST00000446148.2|ZNF300|ENSG00000145908.8|zinc finger protein 300 	ENST00000274599.5|ZNF300|ENSG00000145908.8|zinc finger protein 300 	ENST00000418587.2|ZNF300|ENSG00000145908.8|zinc finger protein 300
hg19_v2_chr6_+_26204825_26204858	0.0643995	GLI2	ENST00000360441.4|HIST1H4E|ENSG00000198518.5|histone cluster 1, H4e
hg19_v2_chr1_-_38471156_38471194	0.0642502	GLI2	ENST00000373016.3|FHL3|ENSG00000183386.5|four and a half LIM domains 3
hg19_v2_chr3_+_184080387_184080403	0.0640734	GLI2	ENST00000455712.1|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H
hg19_v2_chr1_-_32110467_32110491	0.0636263	GLI2	ENST00000440872.2|PEF1|ENSG00000162517.8|penta-EF-hand domain containing 1 	ENST00000373703.4|PEF1|ENSG00000162517.8|penta-EF-hand domain containing 1
hg19_v2_chr10_-_94333784_94333860	0.0634994	GLI2	ENST00000265986.6|IDE|ENSG00000119912.11|insulin-degrading enzyme
hg19_v2_chr20_-_61885826_61885892	0.0634639	GLI2	ENST00000370316.3|NKAIN4|ENSG00000101198.10|Na+/K+ transporting ATPase interacting 4
hg19_v2_chr19_-_10628117_10628130	0.0633831	GLI2	ENST00000333430.4|S1PR5|ENSG00000180739.12|sphingosine-1-phosphate receptor 5
hg19_v2_chrX_+_48911090_48911113	0.0633361	GLI2	ENST00000597275.1|CCDC120|ENSG00000147144.8|coiled-coil domain containing 120
hg19_v2_chr20_+_30598231_30598260	0.0632357	GLI2	ENST00000300415.8|CCM2L|ENSG00000101331.11|cerebral cavernous malformation 2-like 	ENST00000262659.8|CCM2L|ENSG00000101331.11|cerebral cavernous malformation 2-like
hg19_v2_chr6_-_128222103_128222226	0.0627303	GLI2	ENST00000434358.1|THEMIS|ENSG00000172673.6|thymocyte selection associated 	ENST00000543064.1|THEMIS|ENSG00000172673.6|thymocyte selection associated 	ENST00000368248.2|THEMIS|ENSG00000172673.6|thymocyte selection associated
hg19_v2_chrX_-_134305322_134305322	0.0625178	GLI2	ENST00000276241.6|CXorf48|ENSG00000169551.8|cancer/testis antigen 55 	ENST00000344129.2|CXorf48|ENSG00000169551.8|cancer/testis antigen 55
hg19_v2_chr7_-_150780609_150780633	0.0624577	GLI2	ENST00000297533.4|TMUB1|ENSG00000164897.8|transmembrane and ubiquitin-like domain containing 1
hg19_v2_chr12_+_72148614_72148699	0.062407	GLI2	ENST00000261263.3|RAB21|ENSG00000080371.4|RAB21, member RAS oncogene family
hg19_v2_chrX_+_23682379_23682401	0.0623223	GLI2	ENST00000379349.1|PRDX4|ENSG00000123131.8|peroxiredoxin 4
hg19_v2_chr11_+_60739249_60739338	0.0621122	GLI2	ENST00000542157.1|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000433107.2|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000452451.2|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000352009.5|CD6|ENSG00000013725.10|CD6 molecule
hg19_v2_chr6_-_163148700_163148740	0.0619954	GLI2	ENST00000366894.1|PARK2|ENSG00000185345.14|parkin RBR E3 ubiquitin protein ligase 	ENST00000338468.3|PARK2|ENSG00000185345.14|parkin RBR E3 ubiquitin protein ligase
hg19_v2_chr5_-_150284351_150284443	0.0617702	GLI2	ENST00000427179.1|ZNF300|ENSG00000145908.8|zinc finger protein 300
hg19_v2_chr3_+_47422485_47422562	0.061543	GLI2	ENST00000431726.1|PTPN23|ENSG00000076201.10|protein tyrosine phosphatase, non-receptor type 23 	ENST00000456221.1|PTPN23|ENSG00000076201.10|protein tyrosine phosphatase, non-receptor type 23 	ENST00000265562.4|PTPN23|ENSG00000076201.10|protein tyrosine phosphatase, non-receptor type 23
hg19_v2_chr6_-_90024967_90024993	0.0615375	GLI2	ENST00000602399.1|GABRR2|ENSG00000111886.9|gamma-aminobutyric acid (GABA) A receptor, rho 2
hg19_v2_chr19_+_46806856_46806883	0.0611373	GLI2	ENST00000300862.3|HIF3A|ENSG00000124440.11|hypoxia inducible factor 3, alpha subunit
hg19_v2_chr4_+_95128748_95128794	0.061064	GLI2	ENST00000359052.4|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr3_-_15140629_15140670	0.0609905	GLI2	ENST00000507357.1|ZFYVE20|ENSG00000131381.8|zinc finger, FYVE domain containing 20 	ENST00000449050.1|ZFYVE20|ENSG00000131381.8|zinc finger, FYVE domain containing 20 	ENST00000253699.3|ZFYVE20|ENSG00000131381.8|zinc finger, FYVE domain containing 20 	ENST00000435849.3|ZFYVE20|ENSG00000131381.8|zinc finger, FYVE domain containing 20 	ENST00000476527.2|ZFYVE20|ENSG00000131381.8|zinc finger, FYVE domain containing 20
hg19_v2_chr1_-_32403370_32403387	0.0609162	GLI2	ENST00000534796.1|PTP4A2|ENSG00000184007.13|protein tyrosine phosphatase type IVA, member 2
hg19_v2_chr17_-_3461092_3461126	0.0607107	GLI2	ENST00000301365.4|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3 	ENST00000572519.1|TRPV3|ENSG00000167723.10|transient receptor potential cation channel, subfamily V, member 3
hg19_v2_chr3_-_195538760_195538775	0.0605368	GLI2	ENST00000475231.1|MUC4|ENSG00000145113.17|mucin 4, cell surface associated
hg19_v2_chr9_-_98079965_98080008	0.0603355	GLI2	ENST00000289081.3|FANCC|ENSG00000158169.7|Fanconi anemia, complementation group C
hg19_v2_chr19_-_54567159_54567226	0.06033	GLI2	ENST00000338372.2|VSTM1|ENSG00000189068.5|V-set and transmembrane domain containing 1 	ENST00000376626.1|VSTM1|ENSG00000189068.5|V-set and transmembrane domain containing 1
hg19_v2_chr4_+_107236692_107236709	0.0601225	GLI2	ENST00000510207.1|AIMP1|ENSG00000164022.12|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
hg19_v2_chr7_+_142985308_142985453	0.0601055	GLI2	ENST00000310447.5|CASP2|ENSG00000106144.15|caspase 2, apoptosis-related cysteine peptidase
hg19_v2_chr19_+_17638059_17638113	0.0600613	GLI2	ENST00000599164.1|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C 	ENST00000449408.2|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C 	ENST00000600871.1|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C 	ENST00000599124.1|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C
hg19_v2_chr11_+_107879459_107879702	0.0599247	GLI2	ENST00000393094.2|CUL5|ENSG00000166266.9|cullin 5
hg19_v2_chr9_+_87285539_87285575	0.0598941	GLI2	ENST00000359847.3|NTRK2|ENSG00000148053.11|neurotrophic tyrosine kinase, receptor, type 2
hg19_v2_chr3_-_69062764_69062788	0.0595702	GLI2	ENST00000295571.5|EOGT|ENSG00000163378.9|EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr7_-_55606346_55606366	0.0594748	GLI2	ENST00000545390.1|VOPP1|ENSG00000154978.8|vesicular, overexpressed in cancer, prosurvival protein 1
hg19_v2_chr3_-_197476560_197476577	0.0592644	GLI2	ENST00000273582.5|KIAA0226|ENSG00000145016.9|KIAA0226
hg19_v2_chr17_+_40274756_40274831	0.0587952	GLI2	ENST00000355067.3|HSPB9|ENSG00000197723.3|heat shock protein, alpha-crystallin-related, B9
hg19_v2_chr17_-_7017559_7017630	0.0587312	GLI2	ENST00000446679.2|ASGR2|ENSG00000161944.12|asialoglycoprotein receptor 2
hg19_v2_chrX_+_51928002_51928017	0.0581733	GLI2	ENST00000375626.3|MAGED4|ENSG00000154545.12|melanoma antigen family D, 4
hg19_v2_chr14_+_105886150_105886229	0.0580735	GLI2	ENST00000331320.7|MTA1|ENSG00000182979.13|metastasis associated 1 	ENST00000406191.1|MTA1|ENSG00000182979.13|metastasis associated 1
hg19_v2_chr18_+_72201829_72201845	0.0580219	GLI2	ENST00000582365.1|CNDP1|ENSG00000150656.10|carnosine dipeptidase 1 (metallopeptidase M20 family)
hg19_v2_chr2_-_183387064_183387129	0.0576445	GLI2	ENST00000536095.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000331935.6|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000358139.2|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent 	ENST00000456212.1|PDE1A|ENSG00000115252.14|phosphodiesterase 1A, calmodulin-dependent
hg19_v2_chr6_-_99963286_99963365	0.057208	GLI2	ENST00000369233.2|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45 	ENST00000500704.2|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45 	ENST00000329966.6|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45
hg19_v2_chr19_+_11039391_11039409	0.0570591	GLI2	ENST00000270502.6|C19orf52|ENSG00000142444.6|chromosome 19 open reading frame 52
hg19_v2_chr1_-_200379180_200379191	0.0568636	GLI2	ENST00000294740.3|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr19_-_17571613_17571693	0.0567012	GLI2	ENST00000594663.1|CTD-2521M24.10|ENSG00000269035.1|Uncharacterized protein
hg19_v2_chr9_-_122131696_122131745	0.0563185	GLI2	ENST00000373964.2|BRINP1|ENSG00000078725.8|bone morphogenetic protein/retinoic acid inducible neural-specific 1 	ENST00000265922.3|BRINP1|ENSG00000078725.8|bone morphogenetic protein/retinoic acid inducible neural-specific 1
hg19_v2_chr9_+_4839762_4839779	0.0560715	GLI2	ENST00000448872.2|RCL1|ENSG00000120158.7|RNA terminal phosphate cyclase-like 1 	ENST00000441844.1|RCL1|ENSG00000120158.7|RNA terminal phosphate cyclase-like 1
hg19_v2_chr12_-_132628847_132628890	0.0559006	GLI2	ENST00000397333.3|DDX51|ENSG00000185163.5|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
hg19_v2_chr3_-_179754706_179754732	0.0557883	GLI2	ENST00000465751.1|PEX5L|ENSG00000114757.14|peroxisomal biogenesis factor 5-like 	ENST00000467460.1|PEX5L|ENSG00000114757.14|peroxisomal biogenesis factor 5-like
hg19_v2_chr8_-_7320974_7321196	0.0556234	GLI2	ENST00000528943.1|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B 	ENST00000359758.5|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B 	ENST00000361111.2|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B 	ENST00000398462.2|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B 	ENST00000297498.2|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B 	ENST00000317900.5|SPAG11B|ENSG00000164871.13|sperm associated antigen 11B
hg19_v2_chr12_-_11422739_11422812	0.0556061	GLI2	ENST00000279573.7|PRB3|ENSG00000197870.8|proline-rich protein BstNI subfamily 3
hg19_v2_chr9_-_115819039_115819082	0.0556023	GLI2	ENST00000555206.1|ZFP37|ENSG00000136866.9|ZFP37 zinc finger protein
hg19_v2_chr17_-_7017968_7018021	0.055556	GLI2	ENST00000355035.5|ASGR2|ENSG00000161944.12|asialoglycoprotein receptor 2
hg19_v2_chr16_+_56691606_56691719	0.0554399	GLI2	ENST00000334350.6|MT1F|ENSG00000198417.5|metallothionein 1F
hg19_v2_chr5_-_102455801_102455855	0.0550325	GLI2	ENST00000508629.1|GIN1|ENSG00000145723.12|gypsy retrotransposon integrase 1 	ENST00000399004.2|GIN1|ENSG00000145723.12|gypsy retrotransposon integrase 1
hg19_v2_chrX_+_48242863_48242939	0.0543373	GLI2	ENST00000376886.2|SSX4|ENSG00000204645.4|synovial sarcoma, X breakpoint 4 	ENST00000375517.3|SSX4|ENSG00000204645.4|synovial sarcoma, X breakpoint 4
hg19_v2_chr11_+_18416133_18416251	0.0540589	GLI2	ENST00000227157.4|LDHA|ENSG00000134333.9|lactate dehydrogenase A 	ENST00000478970.2|LDHA|ENSG00000134333.9|lactate dehydrogenase A 	ENST00000495052.1|LDHA|ENSG00000134333.9|lactate dehydrogenase A
hg19_v2_chr6_+_26273144_26273175	0.0536196	GLI2	ENST00000377733.2|HIST1H2BI|ENSG00000168242.3|histone cluster 1, H2bi
hg19_v2_chr2_-_203776864_203776949	0.0533227	GLI2	ENST00000261015.4|WDR12|ENSG00000138442.5|WD repeat domain 12
hg19_v2_chr9_+_139871948_139871968	0.0531558	GLI2	ENST00000224167.2|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain) 	ENST00000457950.1|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain) 	ENST00000371625.3|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain) 	ENST00000371623.3|PTGDS|ENSG00000107317.7|prostaglandin D2 synthase 21kDa (brain)
hg19_v2_chr4_+_158142750_158142836	0.0530038	GLI2	ENST00000505888.1|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2 	ENST00000449365.1|GRIA2|ENSG00000120251.14|glutamate receptor, ionotropic, AMPA 2
hg19_v2_chr6_-_143832820_143832875	0.0528417	GLI2	ENST00000002165.6|FUCA2|ENSG00000001036.9|fucosidase, alpha-L- 2, plasma
hg19_v2_chr11_+_46366918_46366992	0.0525566	GLI2	ENST00000528615.1|DGKZ|ENSG00000149091.11|diacylglycerol kinase, zeta 	ENST00000395574.3|DGKZ|ENSG00000149091.11|diacylglycerol kinase, zeta
hg19_v2_chr7_+_99971068_99971128	0.0525437	GLI2	ENST00000198536.2|PILRA|ENSG00000085514.11|paired immunoglobin-like type 2 receptor alpha 	ENST00000453419.1|PILRA|ENSG00000085514.11|paired immunoglobin-like type 2 receptor alpha
hg19_v2_chr22_-_37505588_37505607	0.0524238	GLI2	ENST00000406856.1|TMPRSS6|ENSG00000187045.12|transmembrane protease, serine 6
hg19_v2_chrX_+_129040122_129040174	0.0523792	GLI2	ENST00000394422.3|UTP14A|ENSG00000156697.8|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast) 	ENST00000371051.5|UTP14A|ENSG00000156697.8|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)
hg19_v2_chr17_-_27224621_27224759	0.0521595	GLI2	ENST00000394906.2|FLOT2|ENSG00000132589.11|flotillin 2 	ENST00000585169.1|FLOT2|ENSG00000132589.11|flotillin 2 	ENST00000394908.4|FLOT2|ENSG00000132589.11|flotillin 2
hg19_v2_chr10_-_105156198_105156248	0.0520437	GLI2	ENST00000369815.1|USMG5|ENSG00000173915.8|up-regulated during skeletal muscle growth 5 homolog (mouse) 	ENST00000309579.3|USMG5|ENSG00000173915.8|up-regulated during skeletal muscle growth 5 homolog (mouse) 	ENST00000337003.4|USMG5|ENSG00000173915.8|up-regulated during skeletal muscle growth 5 homolog (mouse)
hg19_v2_chrX_+_107334895_107334934	0.0517665	GLI2	ENST00000372232.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase 	ENST00000345734.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase 	ENST00000372254.3|ATG4A|ENSG00000101844.13|autophagy related 4A, cysteine peptidase
hg19_v2_chr11_+_18416103_18416118	0.0514485	GLI2	ENST00000543445.1|LDHA|ENSG00000134333.9|lactate dehydrogenase A 	ENST00000430553.2|LDHA|ENSG00000134333.9|lactate dehydrogenase A 	ENST00000396222.2|LDHA|ENSG00000134333.9|lactate dehydrogenase A 	ENST00000535451.1|LDHA|ENSG00000134333.9|lactate dehydrogenase A
hg19_v2_chr6_+_30615167_30615213	0.051402	GLI2	ENST00000446773.2|C6orf136|ENSG00000204564.7|chromosome 6 open reading frame 136
hg19_v2_chr9_-_95298314_95298340	0.0513037	GLI2	ENST00000344604.5|ECM2|ENSG00000106823.8|extracellular matrix protein 2, female organ and adipocyte specific 	ENST00000375540.1|ECM2|ENSG00000106823.8|extracellular matrix protein 2, female organ and adipocyte specific
hg19_v2_chr17_-_39580775_39580775	0.051241	GLI2	ENST00000225550.3|KRT37|ENSG00000108417.3|keratin 37
hg19_v2_chr16_-_75300679_75300808	0.0511873	GLI2	ENST00000420641.3|BCAR1|ENSG00000050820.12|breast cancer anti-estrogen resistance 1
hg19_v2_chr2_+_235860616_235860645	0.0509551	GLI2	ENST00000392011.2|SH3BP4|ENSG00000130147.11|SH3-domain binding protein 4
hg19_v2_chr5_+_161494770_161494787	0.0506908	GLI2	ENST00000414552.2|GABRG2|ENSG00000113327.10|gamma-aminobutyric acid (GABA) A receptor, gamma 2 	ENST00000361925.4|GABRG2|ENSG00000113327.10|gamma-aminobutyric acid (GABA) A receptor, gamma 2
hg19_v2_chr14_-_55369525_55369570	0.0502555	GLI2	ENST00000543643.2|GCH1|ENSG00000131979.14|GTP cyclohydrolase 1 	ENST00000536224.2|GCH1|ENSG00000131979.14|GTP cyclohydrolase 1 	ENST00000395514.1|GCH1|ENSG00000131979.14|GTP cyclohydrolase 1 	ENST00000491895.2|GCH1|ENSG00000131979.14|GTP cyclohydrolase 1
hg19_v2_chr3_+_184081175_184081208	0.0501903	GLI2	ENST00000452961.1|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H 	ENST00000296223.3|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H
hg19_v2_chr5_+_70196492_70196601	0.0499815	GLI2	ENST00000317633.9|SERF1A|ENSG00000172058.11|small EDRK-rich factor 1A (telomeric) 	ENST00000511162.1|SERF1A|ENSG00000172058.11|small EDRK-rich factor 1A (telomeric) 	ENST00000354833.3|SERF1A|ENSG00000172058.11|small EDRK-rich factor 1A (telomeric) 	ENST00000513436.2|SERF1A|ENSG00000172058.11|small EDRK-rich factor 1A (telomeric) 	ENST00000504458.1|SERF1A|ENSG00000172058.11|small EDRK-rich factor 1A (telomeric)
hg19_v2_chr19_-_42806444_42806500	0.0499156	GLI2	ENST00000594989.1|PAFAH1B3|ENSG00000079462.3|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)
hg19_v2_chr1_-_19811132_19811158	0.0494729	GLI2	ENST00000433834.1|CAPZB|ENSG00000077549.13|capping protein (actin filament) muscle Z-line, beta
hg19_v2_chr16_-_71842941_71843016	0.0494366	GLI2	ENST00000423132.2|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000433195.2|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000569748.1|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000570017.1|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit
hg19_v2_chr14_-_51297197_51297327	0.0493912	GLI2	ENST00000382043.4|NIN|ENSG00000100503.19|ninein (GSK3B interacting protein)
hg19_v2_chr10_+_71389983_71390040	0.049152	GLI2	ENST00000373279.4|C10orf35|ENSG00000171224.7|chromosome 10 open reading frame 35
hg19_v2_chr3_+_184081213_184081224	0.0489433	GLI2	ENST00000429568.1|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H
hg19_v2_chr1_+_35220613_35220718	0.0489164	GLI2	ENST00000338513.1|GJB5|ENSG00000189280.3|gap junction protein, beta 5, 31.1kDa
hg19_v2_chr3_-_63849571_63849582	0.0487549	GLI2	ENST00000295899.5|THOC7|ENSG00000163634.7|THO complex 7 homolog (Drosophila)
hg19_v2_chr22_+_21336267_21336302	0.0484618	GLI2	ENST00000215739.8|LZTR1|ENSG00000099949.14|leucine-zipper-like transcription regulator 1
hg19_v2_chr5_-_95297534_95297563	0.0482939	GLI2	ENST00000513343.1|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2 	ENST00000431061.2|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr11_-_62783276_62783295	0.0482789	GLI2	ENST00000535878.1|SLC22A8|ENSG00000149452.11|solute carrier family 22 (organic anion transporter), member 8 	ENST00000545207.1|SLC22A8|ENSG00000149452.11|solute carrier family 22 (organic anion transporter), member 8
hg19_v2_chr17_+_42219383_42219424	0.0481585	GLI2	ENST00000245382.6|C17orf53|ENSG00000125319.10|chromosome 17 open reading frame 53
hg19_v2_chr18_+_45778672_45778672	0.0479177	GLI2	ENST00000600091.1|AC091150.1|ENSG00000268960.1|HCG1818186; Uncharacterized protein
hg19_v2_chr3_+_138067666_138067745	0.0470529	GLI2	ENST00000475711.1|MRAS|ENSG00000158186.8|muscle RAS oncogene homolog 	ENST00000464896.1|MRAS|ENSG00000158186.8|muscle RAS oncogene homolog
hg19_v2_chr4_+_1795508_1795623	0.0469345	GLI2	ENST00000260795.2|FGFR3|ENSG00000068078.13|fibroblast growth factor receptor 3 	ENST00000352904.1|FGFR3|ENSG00000068078.13|fibroblast growth factor receptor 3
hg19_v2_chr3_+_128997648_128997733	0.046896	GLI2	ENST00000509042.1|HMCES|ENSG00000183624.9|5-hydroxymethylcytosine (hmC) binding, ES cell-specific 	ENST00000383463.4|HMCES|ENSG00000183624.9|5-hydroxymethylcytosine (hmC) binding, ES cell-specific 	ENST00000417226.2|HMCES|ENSG00000183624.9|5-hydroxymethylcytosine (hmC) binding, ES cell-specific 	ENST00000510314.1|HMCES|ENSG00000183624.9|5-hydroxymethylcytosine (hmC) binding, ES cell-specific
hg19_v2_chr22_-_46450024_46450110	0.0466385	GLI2	ENST00000396008.2|C22orf26|ENSG00000182257.5|chromosome 22 open reading frame 26 	ENST00000333761.1|C22orf26|ENSG00000182257.5|chromosome 22 open reading frame 26
hg19_v2_chr11_-_64901978_64902009	0.0465159	GLI2	ENST00000294256.8|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin 	ENST00000377190.3|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin
hg19_v2_chr19_-_54693521_54693733	0.0465138	GLI2	ENST00000391754.1|MBOAT7|ENSG00000125505.12|membrane bound O-acyltransferase domain containing 7 	ENST00000245615.1|MBOAT7|ENSG00000125505.12|membrane bound O-acyltransferase domain containing 7 	ENST00000431666.2|MBOAT7|ENSG00000125505.12|membrane bound O-acyltransferase domain containing 7
hg19_v2_chr11_-_111957451_111957522	0.0464041	GLI2	ENST00000504148.2|TIMM8B|ENSG00000150779.7|translocase of inner mitochondrial membrane 8 homolog B (yeast) 	ENST00000541231.1|TIMM8B|ENSG00000150779.7|translocase of inner mitochondrial membrane 8 homolog B (yeast)
hg19_v2_chr11_+_95523823_95523845	0.0462305	GLI2	ENST00000538658.1|CEP57|ENSG00000166037.6|centrosomal protein 57kDa
hg19_v2_chr2_-_70475701_70475717	0.0461108	GLI2	ENST00000282574.4|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr9_+_33817461_33817565	0.0459827	GLI2	ENST00000263228.3|UBE2R2|ENSG00000107341.4|ubiquitin-conjugating enzyme E2R 2
hg19_v2_chr17_-_7018128_7018150	0.0457597	GLI2	ENST00000380952.2|ASGR2|ENSG00000161944.12|asialoglycoprotein receptor 2 	ENST00000254850.7|ASGR2|ENSG00000161944.12|asialoglycoprotein receptor 2
hg19_v2_chrX_-_30326445_30326605	0.045323	GLI2	ENST00000378963.1|NR0B1|ENSG00000169297.6|nuclear receptor subfamily 0, group B, member 1
hg19_v2_chr8_-_25902876_25902936	0.0451512	GLI2	ENST00000520164.1|EBF2|ENSG00000221818.4|early B-cell factor 2
hg19_v2_chr1_+_36554470_36554519	0.0451328	GLI2	ENST00000373178.4|ADPRHL2|ENSG00000116863.10|ADP-ribosylhydrolase like 2
hg19_v2_chr1_-_21978312_21978363	0.0450839	GLI2	ENST00000359708.4|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein 	ENST00000290101.4|RAP1GAP|ENSG00000076864.15|RAP1 GTPase activating protein
hg19_v2_chr4_-_102268484_102268521	0.0449297	GLI2	ENST00000394853.4|PPP3CA|ENSG00000138814.12|protein phosphatase 3, catalytic subunit, alpha isozyme
hg19_v2_chr19_-_43709817_43709926	0.0449168	GLI2	ENST00000433626.2|PSG4|ENSG00000243137.3|pregnancy specific beta-1-glycoprotein 4 	ENST00000405312.3|PSG4|ENSG00000243137.3|pregnancy specific beta-1-glycoprotein 4
hg19_v2_chr19_-_44008863_44008882	0.0448623	GLI2	ENST00000601646.1|PHLDB3|ENSG00000176531.6|pleckstrin homology-like domain, family B, member 3
hg19_v2_chr16_+_56691838_56691862	0.0446866	GLI2	ENST00000394501.2|MT1F|ENSG00000198417.5|metallothionein 1F
hg19_v2_chr1_-_200379129_200379174	0.0446327	GLI2	ENST00000367353.1|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr6_+_30614779_30614850	0.0445774	GLI2	ENST00000293604.6|C6orf136|ENSG00000204564.7|chromosome 6 open reading frame 136 	ENST00000376473.5|C6orf136|ENSG00000204564.7|chromosome 6 open reading frame 136
hg19_v2_chr11_+_60739115_60739137	0.0441792	GLI2	ENST00000344028.5|CD6|ENSG00000013725.10|CD6 molecule 	ENST00000346437.4|CD6|ENSG00000013725.10|CD6 molecule
hg19_v2_chr1_+_15479054_15479073	0.0441401	GLI2	ENST00000376014.3|TMEM51|ENSG00000171729.9|transmembrane protein 51 	ENST00000451326.2|TMEM51|ENSG00000171729.9|transmembrane protein 51
hg19_v2_chr7_+_42971799_42971988	0.0440507	GLI2	ENST00000223324.2|MRPL32|ENSG00000106591.3|mitochondrial ribosomal protein L32
hg19_v2_chr11_-_117103208_117103288	0.0439288	GLI2	ENST00000320934.3|PCSK7|ENSG00000160613.8|proprotein convertase subtilisin/kexin type 7 	ENST00000530269.1|PCSK7|ENSG00000160613.8|proprotein convertase subtilisin/kexin type 7
hg19_v2_chr8_-_133493200_133493352	0.0438234	GLI2	ENST00000388996.4|KCNQ3|ENSG00000184156.11|potassium voltage-gated channel, KQT-like subfamily, member 3
hg19_v2_chrX_-_78622805_78622877	0.0436095	GLI2	ENST00000373298.2|ITM2A|ENSG00000078596.6|integral membrane protein 2A
hg19_v2_chr1_-_47407111_47407128	0.0430797	GLI2	ENST00000371904.4|CYP4A11|ENSG00000187048.8|cytochrome P450, family 4, subfamily A, polypeptide 11
hg19_v2_chr3_-_185542817_185542844	0.0430345	GLI2	ENST00000382199.2|IGF2BP2|ENSG00000073792.11|insulin-like growth factor 2 mRNA binding protein 2
hg19_v2_chr9_+_70971815_70971841	0.0427927	GLI2	ENST00000396392.1|PGM5|ENSG00000154330.8|phosphoglucomutase 5 	ENST00000396396.1|PGM5|ENSG00000154330.8|phosphoglucomutase 5
hg19_v2_chr17_-_73851285_73851501	0.042692	GLI2	ENST00000589642.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000593002.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000590221.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000344296.4|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000587374.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000585462.1|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000433525.2|WBP2|ENSG00000132471.7|WW domain binding protein 2 	ENST00000254806.3|WBP2|ENSG00000132471.7|WW domain binding protein 2
hg19_v2_chrX_+_90689810_90689826	0.0426378	GLI2	ENST00000312600.3|PABPC5|ENSG00000174740.7|poly(A) binding protein, cytoplasmic 5
hg19_v2_chr16_-_28506840_28506942	0.0425911	GLI2	ENST00000569430.1|CLN3|ENSG00000188603.12|ceroid-lipofuscinosis, neuronal 3
hg19_v2_chr19_-_55791058_55791244	0.0424491	GLI2	ENST00000587959.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000585927.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000587922.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 	ENST00000585698.1|HSPBP1|ENSG00000133265.6|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1
hg19_v2_chr10_-_102989551_102989551	0.042343	GLI2	ENST00000370193.2|LBX1|ENSG00000138136.5|ladybird homeobox 1
hg19_v2_chr16_+_29984962_29984962	0.0419502	GLI2	ENST00000308893.4|TAOK2|ENSG00000149930.13|TAO kinase 2
hg19_v2_chr17_-_1359443_1359553	0.041786	GLI2	ENST00000574295.1|CRK|ENSG00000167193.7|v-crk avian sarcoma virus CT10 oncogene homolog 	ENST00000398970.5|CRK|ENSG00000167193.7|v-crk avian sarcoma virus CT10 oncogene homolog 	ENST00000300574.2|CRK|ENSG00000167193.7|v-crk avian sarcoma virus CT10 oncogene homolog
hg19_v2_chr20_-_9819674_9819728	0.0417337	GLI2	ENST00000378429.3|PAK7|ENSG00000101349.12|p21 protein (Cdc42/Rac)-activated kinase 7
hg19_v2_chr12_-_110318263_110318320	0.0416043	GLI2	ENST00000318348.4|GLTP|ENSG00000139433.5|glycolipid transfer protein
hg19_v2_chr1_-_165414414_165414433	0.0415957	GLI2	ENST00000359842.5|RXRG|ENSG00000143171.8|retinoid X receptor, gamma
hg19_v2_chr19_-_53758094_53758147	0.0414994	GLI2	ENST00000601828.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000598513.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000599012.1|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000333952.4|ZNF677|ENSG00000197928.6|zinc finger protein 677 	ENST00000598806.1|ZNF677|ENSG00000197928.6|zinc finger protein 677
hg19_v2_chr19_-_10305752_10305811	0.0414899	GLI2	ENST00000540357.1|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1 	ENST00000359526.4|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1 	ENST00000340748.4|DNMT1|ENSG00000130816.10|DNA (cytosine-5-)-methyltransferase 1
hg19_v2_chr16_+_68279207_68279252	0.0414889	GLI2	ENST00000413021.2|PLA2G15|ENSG00000103066.8|phospholipase A2, group XV 	ENST00000565744.1|PLA2G15|ENSG00000103066.8|phospholipase A2, group XV 	ENST00000219345.5|PLA2G15|ENSG00000103066.8|phospholipase A2, group XV
hg19_v2_chr6_+_30614886_30614957	0.0414081	GLI2	ENST00000376471.4|C6orf136|ENSG00000204564.7|chromosome 6 open reading frame 136
hg19_v2_chr12_-_9885888_9885895	0.0409039	GLI2	ENST00000327839.3|CLECL1|ENSG00000184293.3|C-type lectin-like 1
hg19_v2_chr16_+_89686991_89687015	0.0407583	GLI2	ENST00000393092.3|DPEP1|ENSG00000015413.5|dipeptidase 1 (renal)
hg19_v2_chr4_+_95129061_95129198	0.0406958	GLI2	ENST00000354268.4|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr1_+_220267429_220267510	0.0405231	GLI2	ENST00000366922.1|IARS2|ENSG00000067704.8|isoleucyl-tRNA synthetase 2, mitochondrial 	ENST00000302637.5|IARS2|ENSG00000067704.8|isoleucyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr14_-_60632162_60632211	0.0402586	GLI2	ENST00000557185.1|DHRS7|ENSG00000100612.9|dehydrogenase/reductase (SDR family) member 7
hg19_v2_chr2_-_74710078_74710142	0.0401848	GLI2	ENST00000290418.4|CCDC142|ENSG00000135637.9|coiled-coil domain containing 142
hg19_v2_chr3_-_88108212_88108223	0.0400435	GLI2	ENST00000482016.1|CGGBP1|ENSG00000163320.6|CGG triplet repeat binding protein 1
hg19_v2_chr16_-_74700737_74700804	0.0398336	GLI2	ENST00000576652.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000572337.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000571750.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000572990.1|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3 	ENST00000361070.4|RFWD3|ENSG00000168411.9|ring finger and WD repeat domain 3
hg19_v2_chr1_-_200379104_200379128	0.0397672	GLI2	ENST00000367352.3|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr9_-_35096545_35096637	0.0395708	GLI2	ENST00000378617.3|PIGO|ENSG00000165282.9|phosphatidylinositol glycan anchor biosynthesis, class O 	ENST00000341666.3|PIGO|ENSG00000165282.9|phosphatidylinositol glycan anchor biosynthesis, class O 	ENST00000361778.2|PIGO|ENSG00000165282.9|phosphatidylinositol glycan anchor biosynthesis, class O
hg19_v2_chr8_+_134203303_134203380	0.0394273	GLI2	ENST00000519433.1|WISP1|ENSG00000104415.9|WNT1 inducible signaling pathway protein 1 	ENST00000517423.1|WISP1|ENSG00000104415.9|WNT1 inducible signaling pathway protein 1 	ENST00000377863.2|WISP1|ENSG00000104415.9|WNT1 inducible signaling pathway protein 1 	ENST00000220856.6|WISP1|ENSG00000104415.9|WNT1 inducible signaling pathway protein 1
hg19_v2_chr20_+_61867235_61867246	0.039219	GLI2	ENST00000342412.6|BIRC7|ENSG00000101197.8|baculoviral IAP repeat containing 7 	ENST00000217169.3|BIRC7|ENSG00000101197.8|baculoviral IAP repeat containing 7
hg19_v2_chr18_-_60987220_60987386	0.0391278	GLI2	ENST00000398117.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr6_+_27925019_27925019	0.0390492	GLI2	ENST00000244623.1|OR2B6|ENSG00000124657.1|olfactory receptor, family 2, subfamily B, member 6
hg19_v2_chr16_-_3767551_3767598	0.0387953	GLI2	ENST00000246957.5|TRAP1|ENSG00000126602.6|TNF receptor-associated protein 1
hg19_v2_chr1_+_15479021_15479053	0.0386541	GLI2	ENST00000428417.1|TMEM51|ENSG00000171729.9|transmembrane protein 51
hg19_v2_chr17_+_42219267_42219329	0.0385132	GLI2	ENST00000319977.4|C17orf53|ENSG00000125319.10|chromosome 17 open reading frame 53 	ENST00000585683.1|C17orf53|ENSG00000125319.10|chromosome 17 open reading frame 53
hg19_v2_chr17_-_6554877_6554954	0.0381865	GLI2	ENST00000225728.3|MED31|ENSG00000108590.6|mediator complex subunit 31 	ENST00000575197.1|MED31|ENSG00000108590.6|mediator complex subunit 31
hg19_v2_chr9_-_115818951_115819011	0.0380262	GLI2	ENST00000553380.1|ZFP37|ENSG00000136866.9|ZFP37 zinc finger protein 	ENST00000374227.3|ZFP37|ENSG00000136866.9|ZFP37 zinc finger protein
hg19_v2_chrX_-_48216101_48216142	0.0377025	GLI2	ENST00000298396.2|SSX3|ENSG00000165584.11|synovial sarcoma, X breakpoint 3 	ENST00000376893.3|SSX3|ENSG00000165584.11|synovial sarcoma, X breakpoint 3
hg19_v2_chr7_-_42971759_42971822	0.0375565	GLI2	ENST00000538645.1|PSMA2|ENSG00000106588.6|proteasome (prosome, macropain) subunit, alpha type, 2 	ENST00000445517.1|PSMA2|ENSG00000106588.6|proteasome (prosome, macropain) subunit, alpha type, 2 	ENST00000223321.4|PSMA2|ENSG00000106588.6|proteasome (prosome, macropain) subunit, alpha type, 2
hg19_v2_chr11_-_116662593_116662620	0.037524	GLI2	ENST00000227665.4|APOA5|ENSG00000110243.7|apolipoprotein A-V
hg19_v2_chr2_+_74710194_74710217	0.0371993	GLI2	ENST00000410003.1|TTC31|ENSG00000115282.15|tetratricopeptide repeat domain 31 	ENST00000442235.2|TTC31|ENSG00000115282.15|tetratricopeptide repeat domain 31 	ENST00000233623.5|TTC31|ENSG00000115282.15|tetratricopeptide repeat domain 31
hg19_v2_chr11_+_60739140_60739243	0.0370585	GLI2	ENST00000313421.7|CD6|ENSG00000013725.10|CD6 molecule
hg19_v2_chr7_+_5919458_5919458	0.0368524	GLI2	ENST00000416608.1|OCM|ENSG00000122543.6|oncomodulin
hg19_v2_chr19_-_2256405_2256428	0.0367771	GLI2	ENST00000300961.6|JSRP1|ENSG00000167476.6|junctional sarcoplasmic reticulum protein 1
hg19_v2_chr7_-_141673573_141673573	0.0364885	GLI2	ENST00000547270.1|TAS2R38|ENSG00000257138.1|taste receptor, type 2, member 38
hg19_v2_chr11_+_89764274_89764274	0.0363133	GLI2	ENST00000448984.1|TRIM49C|ENSG00000204449.2|tripartite motif containing 49C 	ENST00000432771.1|TRIM49C|ENSG00000204449.2|tripartite motif containing 49C
hg19_v2_chr16_+_89979826_89979826	0.036311	GLI2	ENST00000555427.1|MC1R|ENSG00000258839.2|melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)
hg19_v2_chr20_+_36932521_36932532	0.0355598	GLI2	ENST00000262865.4|BPI|ENSG00000101425.8|bactericidal/permeability-increasing protein
hg19_v2_chr5_+_9546306_9546329	0.0352587	GLI2	ENST00000508179.1|SNHG18|ENSG00000250786.1|small nucleolar RNA host gene 18 (non-protein coding)
hg19_v2_chr5_+_64920543_64920592	0.0351436	GLI2	ENST00000399438.3|TRAPPC13|ENSG00000113597.13|trafficking protein particle complex 13 	ENST00000510585.2|CTC-534A2.2|ENSG00000253251.2|CDNA FLJ26957 fis, clone SLV00486; Uncharacterized protein
hg19_v2_chr19_+_17638041_17638055	0.0348975	GLI2	ENST00000601861.1|FAM129C|ENSG00000167483.13|family with sequence similarity 129, member C
hg19_v2_chr5_-_95297678_95297775	0.0347664	GLI2	ENST00000237853.4|ELL2|ENSG00000118985.10|elongation factor, RNA polymerase II, 2
hg19_v2_chr11_-_89541743_89541743	0.0347339	GLI2	ENST00000329758.1|TRIM49|ENSG00000168930.9|tripartite motif containing 49
hg19_v2_chr1_+_26869597_26869637	0.0345343	GLI2	ENST00000530003.1|RPS6KA1|ENSG00000117676.9|ribosomal protein S6 kinase, 90kDa, polypeptide 1
hg19_v2_chr11_+_62495997_62496011	0.0344886	GLI2	ENST00000316461.4|TTC9C|ENSG00000162222.9|tetratricopeptide repeat domain 9C
hg19_v2_chr11_+_34938119_34938204	0.0341887	GLI2	ENST00000227868.4|PDHX|ENSG00000110435.7|pyruvate dehydrogenase complex, component X 	ENST00000430469.2|PDHX|ENSG00000110435.7|pyruvate dehydrogenase complex, component X 	ENST00000533262.1|PDHX|ENSG00000110435.7|pyruvate dehydrogenase complex, component X
hg19_v2_chr22_-_50964849_50964903	0.03412	GLI2	ENST00000543927.1|SCO2|ENSG00000130489.8|SCO2 cytochrome c oxidase assembly protein 	ENST00000423348.1|SCO2|ENSG00000130489.8|SCO2 cytochrome c oxidase assembly protein
hg19_v2_chr16_-_69368774_69368774	0.0339694	GLI2	ENST00000562949.1|RP11-343C2.12|ENSG00000272617.1|Conserved oligomeric Golgi complex subunit 8
hg19_v2_chrX_+_24072833_24072907	0.0338137	GLI2	ENST00000253039.4|EIF2S3|ENSG00000130741.6|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa
hg19_v2_chr15_+_59063478_59063561	0.0336551	GLI2	ENST00000559228.1|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B 	ENST00000450403.2|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B
hg19_v2_chr1_-_1141927_1141985	0.0333623	GLI2	ENST00000328596.6|TNFRSF18|ENSG00000186891.9|tumor necrosis factor receptor superfamily, member 18 	ENST00000379265.5|TNFRSF18|ENSG00000186891.9|tumor necrosis factor receptor superfamily, member 18
hg19_v2_chr19_+_3585471_3585551	0.033244	GLI2	ENST00000322315.5|GIPC3|ENSG00000179855.5|GIPC PDZ domain containing family, member 3
hg19_v2_chr1_-_161014731_161014788	0.0332328	GLI2	ENST00000368020.1|USF1|ENSG00000158773.10|upstream transcription factor 1
hg19_v2_chr19_-_11347173_11347241	0.0330717	GLI2	ENST00000587656.1|DOCK6|ENSG00000130158.9|dedicator of cytokinesis 6
hg19_v2_chr9_-_35958151_35958151	0.0330229	GLI2	ENST00000341959.2|OR2S2|ENSG00000122718.4|olfactory receptor, family 2, subfamily S, member 2
hg19_v2_chr6_-_99963252_99963264	0.0329941	GLI2	ENST00000392738.2|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45 	ENST00000327681.6|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45 	ENST00000472914.2|USP45|ENSG00000123552.13|ubiquitin specific peptidase 45
hg19_v2_chr16_+_86229728_86229787	0.0328541	GLI2	ENST00000601250.1|LINC01082|ENSG00000269186.1|long intergenic non-protein coding RNA 1082
hg19_v2_chr8_+_1922024_1922069	0.0327129	GLI2	ENST00000320248.3|KBTBD11|ENSG00000176595.3|kelch repeat and BTB (POZ) domain containing 11
hg19_v2_chr16_+_56691911_56691929	0.0325053	GLI2	ENST00000568475.1|MT1F|ENSG00000198417.5|metallothionein 1F
hg19_v2_chr16_+_89228757_89228790	0.0322927	GLI2	ENST00000565008.1|LINC00304|ENSG00000180422.3|long intergenic non-protein coding RNA 304
hg19_v2_chr10_-_113943447_113943536	0.0321537	GLI2	ENST00000369425.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000348367.4|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial 	ENST00000423155.1|GPAM|ENSG00000119927.9|glycerol-3-phosphate acyltransferase, mitochondrial
hg19_v2_chr10_+_104474207_104474297	0.0321225	GLI2	ENST00000602831.1|SFXN2|ENSG00000156398.8|sideroflexin 2 	ENST00000369893.5|SFXN2|ENSG00000156398.8|sideroflexin 2
hg19_v2_chr12_+_104982622_104982628	0.0319256	GLI2	ENST00000549016.1|CHST11|ENSG00000171310.6|carbohydrate (chondroitin 4) sulfotransferase 11
hg19_v2_chr6_-_29600832_29600982	0.0316648	GLI2	ENST00000377016.4|GABBR1|ENSG00000204681.6|gamma-aminobutyric acid (GABA) B receptor, 1 	ENST00000376977.3|GABBR1|ENSG00000204681.6|gamma-aminobutyric acid (GABA) B receptor, 1 	ENST00000377034.4|GABBR1|ENSG00000204681.6|gamma-aminobutyric acid (GABA) B receptor, 1
hg19_v2_chr1_-_40042416_40042470	0.0314816	GLI2	ENST00000372857.3|PABPC4|ENSG00000090621.9|poly(A) binding protein, cytoplasmic 4 (inducible form) 	ENST00000372856.3|PABPC4|ENSG00000090621.9|poly(A) binding protein, cytoplasmic 4 (inducible form) 	ENST00000531243.2|PABPC4|ENSG00000090621.9|poly(A) binding protein, cytoplasmic 4 (inducible form) 	ENST00000451091.2|PABPC4|ENSG00000090621.9|poly(A) binding protein, cytoplasmic 4 (inducible form)
hg19_v2_chr6_+_116892530_116892592	0.0310429	GLI2	ENST00000466444.2|RWDD1|ENSG00000111832.8|RWD domain containing 1 	ENST00000368590.5|RWDD1|ENSG00000111832.8|RWD domain containing 1 	ENST00000392526.1|RWDD1|ENSG00000111832.8|RWD domain containing 1
hg19_v2_chr22_+_18834324_18834324	0.0309896	GLI2	ENST00000342005.4|AC008132.13|ENSG00000161103.7|Uncharacterized protein
hg19_v2_chr17_+_77030267_77030391	0.0309531	GLI2	ENST00000581774.1|C1QTNF1|ENSG00000173918.10|C1q and tumor necrosis factor related protein 1
hg19_v2_chr20_+_30639991_30640001	0.0308637	GLI2	ENST00000534862.1|HCK|ENSG00000101336.8|hemopoietic cell kinase 	ENST00000538448.1|HCK|ENSG00000101336.8|hemopoietic cell kinase 	ENST00000375862.2|HCK|ENSG00000101336.8|hemopoietic cell kinase
hg19_v2_chrX_-_141293047_141293082	0.0307926	GLI2	ENST00000247452.3|MAGEC2|ENSG00000046774.9|melanoma antigen family C, 2
hg19_v2_chr3_-_195538728_195538754	0.0306718	GLI2	ENST00000349607.4|MUC4|ENSG00000145113.17|mucin 4, cell surface associated 	ENST00000346145.4|MUC4|ENSG00000145113.17|mucin 4, cell surface associated
hg19_v2_chr16_-_4897266_4897343	0.030496	GLI2	ENST00000591451.1|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000436648.5|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000381983.3|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000588297.1|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis) 	ENST00000321919.9|GLYR1|ENSG00000140632.12|glyoxylate reductase 1 homolog (Arabidopsis)
hg19_v2_chr2_+_26467825_26467847	0.0303027	GLI2	ENST00000545822.1|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 	ENST00000425035.1|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
hg19_v2_chr2_+_114737146_114737158	0.0302863	GLI2	ENST00000412690.1|AC010982.1|ENSG00000234199.2|AC010982.1
hg19_v2_chr3_+_184032419_184032445	0.030175	GLI2	ENST00000352767.3|EIF4G1|ENSG00000114867.15|eukaryotic translation initiation factor 4 gamma, 1 	ENST00000427141.2|EIF4G1|ENSG00000114867.15|eukaryotic translation initiation factor 4 gamma, 1
hg19_v2_chr7_+_150076406_150076456	0.0300446	GLI2	ENST00000329630.5|ZNF775|ENSG00000196456.4|zinc finger protein 775
hg19_v2_chr17_+_30677136_30677205	0.0300315	GLI2	ENST00000394670.4|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000321233.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394673.2|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000341711.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000579634.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000580759.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000342555.6|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000577908.1|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000394679.5|ZNF207|ENSG00000010244.12|zinc finger protein 207 	ENST00000582165.1|ZNF207|ENSG00000010244.12|zinc finger protein 207
hg19_v2_chr16_+_72088376_72088537	0.0300215	GLI2	ENST00000570083.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000355906.5|HP|ENSG00000257017.4|haptoglobin 	ENST00000398131.2|HP|ENSG00000257017.4|haptoglobin 	ENST00000569639.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000356967.5|HPR|ENSG00000261701.2|haptoglobin-related protein 	ENST00000564499.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000357763.4|HP|ENSG00000257017.4|haptoglobin 	ENST00000562526.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000565574.1|HP|ENSG00000257017.4|haptoglobin 	ENST00000568417.2|HP|ENSG00000257017.4|haptoglobin
hg19_v2_chr18_-_268019_268064	0.0299513	GLI2	ENST00000261600.6|THOC1|ENSG00000079134.7|THO complex 1
hg19_v2_chr7_+_150498610_150498659	0.0297829	GLI2	ENST00000461345.1|TMEM176A|ENSG00000002933.3|transmembrane protein 176A
hg19_v2_chr12_+_53689309_53689366	0.0295662	GLI2	ENST00000351500.3|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000550846.1|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000334478.4|PFDN5|ENSG00000123349.9|prefoldin subunit 5 	ENST00000549759.1|PFDN5|ENSG00000123349.9|prefoldin subunit 5
hg19_v2_chr19_+_55085248_55085346	0.0293007	GLI2	ENST00000391738.3|LILRA2|ENSG00000239998.1|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 	ENST00000251376.3|LILRA2|ENSG00000239998.1|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 	ENST00000391737.1|LILRA2|ENSG00000239998.1|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 	ENST00000396321.2|LILRB1|ENSG00000104972.10|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1 	ENST00000418536.2|LILRB1|ENSG00000104972.10|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1 	ENST00000448689.1|LILRB1|ENSG00000104972.10|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1
hg19_v2_chr5_+_7869217_7869352	0.0285992	GLI2	ENST00000264668.2|MTRR|ENSG00000124275.10|5-methyltetrahydrofolate-homocysteine methyltransferase reductase 	ENST00000514220.1|MTRR|ENSG00000124275.10|5-methyltetrahydrofolate-homocysteine methyltransferase reductase 	ENST00000341013.6|MTRR|ENSG00000124275.10|5-methyltetrahydrofolate-homocysteine methyltransferase reductase 	ENST00000440940.2|MTRR|ENSG00000124275.10|5-methyltetrahydrofolate-homocysteine methyltransferase reductase 	ENST00000502550.1|MTRR|ENSG00000124275.10|5-methyltetrahydrofolate-homocysteine methyltransferase reductase 	ENST00000506877.1|MTRR|ENSG00000124275.10|5-methyltetrahydrofolate-homocysteine methyltransferase reductase
hg19_v2_chr16_+_67063262_67063364	0.028419	GLI2	ENST00000565389.1|CBFB|ENSG00000067955.9|core-binding factor, beta subunit
hg19_v2_chr16_-_53537105_53537163	0.0282161	GLI2	ENST00000568596.1|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000570004.1|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000564497.1|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000300245.4|AKTIP|ENSG00000166971.12|AKT interacting protein 	ENST00000394657.7|AKTIP|ENSG00000166971.12|AKT interacting protein
hg19_v2_chr2_-_39348137_39348212	0.0279674	GLI2	ENST00000426016.1|SOS1|ENSG00000115904.8|son of sevenless homolog 1 (Drosophila)
hg19_v2_chr15_-_39486510_39486531	0.0275933	GLI2	ENST00000560743.1|RP11-265N7.1|ENSG00000259450.1|RP11-265N7.1
hg19_v2_chr8_-_128960591_128960591	0.0272074	GLI2	ENST00000539634.1|TMEM75|ENSG00000256655.1|transmembrane protein 75
hg19_v2_chr19_-_54567035_54567060	0.0271706	GLI2	ENST00000366170.2|VSTM1|ENSG00000189068.5|V-set and transmembrane domain containing 1 	ENST00000425006.2|VSTM1|ENSG00000189068.5|V-set and transmembrane domain containing 1
hg19_v2_chr10_+_32735030_32735110	0.0271355	GLI2	ENST00000277657.6|CCDC7|ENSG00000216937.7|coiled-coil domain containing 7 	ENST00000362006.5|CCDC7|ENSG00000216937.7|coiled-coil domain containing 7
hg19_v2_chr4_+_107236847_107236876	0.0269876	GLI2	ENST00000358008.3|AIMP1|ENSG00000164022.12|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
hg19_v2_chr10_+_120863587_120863631	0.0268824	GLI2	ENST00000535029.1|FAM45A|ENSG00000119979.11|family with sequence similarity 45, member A 	ENST00000361432.2|FAM45A|ENSG00000119979.11|family with sequence similarity 45, member A 	ENST00000544016.1|FAM45A|ENSG00000119979.11|family with sequence similarity 45, member A
hg19_v2_chr19_+_44220162_44220214	0.0268651	GLI2	ENST00000244314.5|IRGC|ENSG00000124449.6|immunity-related GTPase family, cinema
hg19_v2_chr19_-_12834739_12834825	0.0267696	GLI2	ENST00000589337.1|TNPO2|ENSG00000105576.11|transportin 2 	ENST00000425528.1|TNPO2|ENSG00000105576.11|transportin 2 	ENST00000441499.1|TNPO2|ENSG00000105576.11|transportin 2 	ENST00000588216.1|TNPO2|ENSG00000105576.11|transportin 2
hg19_v2_chr17_-_37557846_37557920	0.0267415	GLI2	ENST00000394294.3|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20 	ENST00000583610.1|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20 	ENST00000264658.6|FBXL20|ENSG00000108306.7|F-box and leucine-rich repeat protein 20
hg19_v2_chr20_+_48599506_48599536	0.0266422	GLI2	ENST00000244050.2|SNAI1|ENSG00000124216.3|snail family zinc finger 1
hg19_v2_chr17_+_26989109_26989248	0.0265984	GLI2	ENST00000314616.6|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae) 	ENST00000347486.4|SUPT6H|ENSG00000109111.10|suppressor of Ty 6 homolog (S. cerevisiae)
hg19_v2_chr5_+_56205878_56205932	0.0264313	GLI2	ENST00000423328.1|SETD9|ENSG00000155542.7|SET domain containing 9
hg19_v2_chr7_-_151107106_151107129	0.0259325	GLI2	ENST00000334493.6|WDR86|ENSG00000187260.11|WD repeat domain 86
hg19_v2_chr8_+_94929168_94929235	0.0253741	GLI2	ENST00000518107.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1 	ENST00000396200.3|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chrX_-_15402498_15402515	0.0251211	GLI2	ENST00000297904.3|FIGF|ENSG00000165197.4|c-fos induced growth factor (vascular endothelial growth factor D)
hg19_v2_chr19_-_49176264_49176338	0.0248366	GLI2	ENST00000270235.4|NTN5|ENSG00000142233.7|netrin 5 	ENST00000596844.1|NTN5|ENSG00000142233.7|netrin 5
hg19_v2_chr5_+_154238042_154238091	0.024772	GLI2	ENST00000519211.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000522458.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000519903.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000521450.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000403027.2|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8
hg19_v2_chr3_+_184081137_184081155	0.0245052	GLI2	ENST00000443489.1|POLR2H|ENSG00000163882.5|polymerase (RNA) II (DNA directed) polypeptide H
hg19_v2_chr12_+_123465218_123465295	0.0242828	GLI2	ENST00000412505.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4 	ENST00000439686.2|ARL6IP4|ENSG00000182196.9|ADP-ribosylation-like factor 6 interacting protein 4
hg19_v2_chr11_+_31531291_31531345	0.0241541	GLI2	ENST00000350638.5|ELP4|ENSG00000109911.13|elongator acetyltransferase complex subunit 4 	ENST00000379163.5|ELP4|ENSG00000109911.13|elongator acetyltransferase complex subunit 4 	ENST00000395934.2|ELP4|ENSG00000109911.13|elongator acetyltransferase complex subunit 4
hg19_v2_chr1_-_1310870_1310920	0.0240389	GLI2	ENST00000338338.5|AURKAIP1|ENSG00000175756.9|aurora kinase A interacting protein 1
hg19_v2_chr3_+_100328433_100328459	0.0235435	GLI2	ENST00000273352.3|GPR128|ENSG00000144820.3|G protein-coupled receptor 128
hg19_v2_chr8_+_94752349_94752349	0.0235363	GLI2	ENST00000391680.1|RBM12B-AS1|ENSG00000212998.1|RBM12B antisense RNA 1
hg19_v2_chr14_+_29236269_29236287	0.0234577	GLI2	ENST00000313071.4|FOXG1|ENSG00000176165.7|forkhead box G1
hg19_v2_chr8_+_94929077_94929106	0.0234439	GLI2	ENST00000297598.4|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1 	ENST00000520614.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr5_-_89770582_89770603	0.0232975	GLI2	ENST00000316610.6|MBLAC2|ENSG00000176055.9|metallo-beta-lactamase domain containing 2
hg19_v2_chr19_+_17186577_17186637	0.023214	GLI2	ENST00000595618.1|MYO9B|ENSG00000099331.9|myosin IXB 	ENST00000594824.1|MYO9B|ENSG00000099331.9|myosin IXB
hg19_v2_chr8_-_134115118_134115298	0.0229903	GLI2	ENST00000395352.3|SLA|ENSG00000155926.9|Src-like-adaptor 	ENST00000338087.5|SLA|ENSG00000155926.9|Src-like-adaptor
hg19_v2_chr8_-_67525473_67525518	0.0229586	GLI2	ENST00000522677.3|MYBL1|ENSG00000185697.12|v-myb avian myeloblastosis viral oncogene homolog-like 1
hg19_v2_chr14_+_94577074_94577161	0.0227745	GLI2	ENST00000444961.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000448882.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000557098.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000554800.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000556544.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000298902.5|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000555819.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000557634.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27 	ENST00000555744.1|IFI27|ENSG00000165949.8|interferon, alpha-inducible protein 27
hg19_v2_chr16_+_22308717_22308764	0.0226367	GLI2	ENST00000299853.5|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD) 	ENST00000564209.1|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD) 	ENST00000565358.1|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD) 	ENST00000418581.2|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD) 	ENST00000564883.1|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD) 	ENST00000359210.4|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD) 	ENST00000563024.1|POLR3E|ENSG00000058600.11|polymerase (RNA) III (DNA directed) polypeptide E (80kD)
hg19_v2_chr10_-_99258135_99258195	0.0221926	GLI2	ENST00000327238.10|MMS19|ENSG00000155229.16|MMS19 nucleotide excision repair homolog (S. cerevisiae) 	ENST00000327277.7|MMS19|ENSG00000155229.16|MMS19 nucleotide excision repair homolog (S. cerevisiae) 	ENST00000355839.6|MMS19|ENSG00000155229.16|MMS19 nucleotide excision repair homolog (S. cerevisiae) 	ENST00000437002.1|MMS19|ENSG00000155229.16|MMS19 nucleotide excision repair homolog (S. cerevisiae) 	ENST00000422685.1|MMS19|ENSG00000155229.16|MMS19 nucleotide excision repair homolog (S. cerevisiae)
hg19_v2_chr16_+_33204156_33204156	0.0216493	GLI2	ENST00000398667.4|TP53TG3C|ENSG00000205457.6|TP53 target 3C
hg19_v2_chr19_-_39466396_39466550	0.0214881	GLI2	ENST00000292852.4|FBXO17|ENSG00000269190.1|F-box protein 17
hg19_v2_chr1_+_207226574_207226656	0.0213977	GLI2	ENST00000367080.3|PFKFB2|ENSG00000123836.10|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 	ENST00000367079.2|PFKFB2|ENSG00000123836.10|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
hg19_v2_chr10_+_14880157_14880176	0.0212999	GLI2	ENST00000378372.3|HSPA14|ENSG00000187522.9|heat shock 70kDa protein 14
hg19_v2_chr3_-_38071122_38071253	0.0211397	GLI2	ENST00000334661.4|PLCD1|ENSG00000187091.9|phospholipase C, delta 1
hg19_v2_chr19_-_55668093_55668174	0.0210856	GLI2	ENST00000588882.1|TNNI3|ENSG00000129991.8|troponin I type 3 (cardiac) 	ENST00000586858.1|TNNI3|ENSG00000129991.8|troponin I type 3 (cardiac)
hg19_v2_chr8_+_29953163_29953190	0.0210179	GLI2	ENST00000518192.1|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1
hg19_v2_chr19_-_16045665_16045708	0.0209651	GLI2	ENST00000248041.8|CYP4F11|ENSG00000171903.12|cytochrome P450, family 4, subfamily F, polypeptide 11
hg19_v2_chr2_+_26467762_26467817	0.0205086	GLI2	ENST00000317799.5|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 	ENST00000405867.3|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit 	ENST00000537713.1|HADHB|ENSG00000138029.9|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit
hg19_v2_chr10_-_101989315_101989376	0.0204179	GLI2	ENST00000370397.7|CHUK|ENSG00000213341.6|conserved helix-loop-helix ubiquitous kinase
hg19_v2_chr11_-_113345842_113345994	0.0200622	GLI2	ENST00000346454.3|DRD2|ENSG00000149295.9|dopamine receptor D2
hg19_v2_chr6_+_158402860_158403070	0.0200544	GLI2	ENST00000367122.2|SYNJ2|ENSG00000078269.9|synaptojanin 2 	ENST00000367121.3|SYNJ2|ENSG00000078269.9|synaptojanin 2 	ENST00000355585.4|SYNJ2|ENSG00000078269.9|synaptojanin 2 	ENST00000367113.4|SYNJ2|ENSG00000078269.9|synaptojanin 2
hg19_v2_chr11_+_134094508_134094617	0.0197134	GLI2	ENST00000281187.5|VPS26B|ENSG00000151502.6|vacuolar protein sorting 26 homolog B (S. pombe) 	ENST00000525095.2|VPS26B|ENSG00000151502.6|vacuolar protein sorting 26 homolog B (S. pombe)
hg19_v2_chr16_+_28834531_28834588	0.019572	GLI2	ENST00000570200.1|ATXN2L|ENSG00000168488.14|ataxin 2-like
hg19_v2_chr4_-_46391367_46391436	0.0187036	GLI2	ENST00000503806.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2 	ENST00000356504.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2 	ENST00000514090.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2 	ENST00000506961.1|GABRA2|ENSG00000151834.11|gamma-aminobutyric acid (GABA) A receptor, alpha 2
hg19_v2_chr14_+_105047478_105047605	0.0186926	GLI2	ENST00000410013.1|C14orf180|ENSG00000184601.6|chromosome 14 open reading frame 180
hg19_v2_chr1_+_207669573_207669606	0.0186406	GLI2	ENST00000400960.2|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group) 	ENST00000534202.1|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group)
hg19_v2_chr15_-_63449663_63449698	0.0184433	GLI2	ENST00000439025.1|RPS27L|ENSG00000185088.8|ribosomal protein S27-like
hg19_v2_chr15_-_34875771_34875894	0.0180316	GLI2	ENST00000267731.7|GOLGA8B|ENSG00000215252.7|golgin A8 family, member B
hg19_v2_chr19_-_16045619_16045649	0.0178871	GLI2	ENST00000402119.4|CYP4F11|ENSG00000171903.12|cytochrome P450, family 4, subfamily F, polypeptide 11
hg19_v2_chr5_-_132299290_132299310	0.0178543	GLI2	ENST00000378595.3|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr14_+_37667193_37667219	0.017815	GLI2	ENST00000539062.2|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1
hg19_v2_chr9_-_139652678_139652699	0.0173335	GLI2	ENST00000371688.3|LCN8|ENSG00000204001.5|lipocalin 8
hg19_v2_chr11_-_18765389_18765499	0.0173149	GLI2	ENST00000477854.1|PTPN5|ENSG00000110786.13|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)
hg19_v2_chr15_-_69113218_69113250	0.0172984	GLI2	ENST00000560303.1|ANP32A|ENSG00000140350.11|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A 	ENST00000465139.2|ANP32A|ENSG00000140350.11|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A
hg19_v2_chr12_-_10542617_10542647	0.0172021	GLI2	ENST00000240618.6|KLRK1|ENSG00000213809.4|killer cell lectin-like receptor subfamily K, member 1
hg19_v2_chr18_+_11752040_11752117	0.0171083	GLI2	ENST00000423027.3|GNAL|ENSG00000141404.11|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
hg19_v2_chr14_+_37667230_37667304	0.0169951	GLI2	ENST00000556451.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000556753.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000396294.2|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1
hg19_v2_chr2_-_241759622_241759725	0.0169674	GLI2	ENST00000320389.7|KIF1A|ENSG00000130294.10|kinesin family member 1A 	ENST00000498729.2|KIF1A|ENSG00000130294.10|kinesin family member 1A
hg19_v2_chr4_-_156298028_156298039	0.0168131	GLI2	ENST00000433024.1|MAP9|ENSG00000164114.14|microtubule-associated protein 9 	ENST00000379248.2|MAP9|ENSG00000164114.14|microtubule-associated protein 9
hg19_v2_chr15_+_79603404_79603475	0.0168071	GLI2	ENST00000299705.5|TMED3|ENSG00000166557.8|transmembrane emp24 protein transport domain containing 3
hg19_v2_chr4_+_40194609_40194616	0.0167953	GLI2	ENST00000508513.1|RHOH|ENSG00000168421.8|ras homolog family member H
hg19_v2_chr7_+_150498783_150498890	0.0166637	GLI2	ENST00000475536.1|TMEM176A|ENSG00000002933.3|transmembrane protein 176A 	ENST00000468689.1|TMEM176A|ENSG00000002933.3|transmembrane protein 176A
hg19_v2_chr5_+_80597419_80597448	0.0164525	GLI2	ENST00000254037.2|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9 	ENST00000407610.3|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9 	ENST00000380199.5|ZCCHC9|ENSG00000131732.7|zinc finger, CCHC domain containing 9
hg19_v2_chr13_+_25670268_25670315	0.0162803	GLI2	ENST00000281589.3|PABPC3|ENSG00000151846.7|poly(A) binding protein, cytoplasmic 3
hg19_v2_chr19_-_59031118_59031193	0.0160181	GLI2	ENST00000600990.1|ZBTB45|ENSG00000119574.8|zinc finger and BTB domain containing 45
hg19_v2_chr5_+_154238096_154238119	0.0158464	GLI2	ENST00000517568.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000524105.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000285896.6|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8
hg19_v2_chr14_+_37667118_37667192	0.0156195	GLI2	ENST00000556615.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000327441.7|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1 	ENST00000536774.1|MIPOL1|ENSG00000151338.14|mirror-image polydactyly 1
hg19_v2_chr3_-_72496035_72496069	0.0156002	GLI2	ENST00000477973.2|RYBP|ENSG00000163602.9|RING1 and YY1 binding protein
hg19_v2_chr11_+_111473108_111473226	0.0155289	GLI2	ENST00000304987.3|SIK2|ENSG00000170145.4|salt-inducible kinase 2
hg19_v2_chr8_+_94929110_94929167	0.0147179	GLI2	ENST00000520728.1|PDP1|ENSG00000164951.11|pyruvate dehyrogenase phosphatase catalytic subunit 1
hg19_v2_chr12_+_120740119_120740124	0.0146815	GLI2	ENST00000536460.1|SIRT4|ENSG00000089163.4|sirtuin 4 	ENST00000202967.4|SIRT4|ENSG00000089163.4|sirtuin 4
hg19_v2_chr21_-_28338732_28338832	0.0146499	GLI2	ENST00000284987.5|ADAMTS5|ENSG00000154736.5|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg19_v2_chr6_+_116892641_116892726	0.014107	GLI2	ENST00000487832.2|RWDD1|ENSG00000111832.8|RWD domain containing 1 	ENST00000518117.1|RWDD1|ENSG00000111832.8|RWD domain containing 1
hg19_v2_chr19_+_782755_782833	0.013901	GLI2	ENST00000606242.1|AC006273.5|ENSG00000267530.2|AC006273.5	ENST00000586061.1|AC006273.5|ENSG00000267530.2|AC006273.5
hg19_v2_chr16_-_89883015_89883088	0.0134754	GLI2	ENST00000563673.1|FANCA|ENSG00000187741.10|Fanconi anemia, complementation group A 	ENST00000389301.3|FANCA|ENSG00000187741.10|Fanconi anemia, complementation group A 	ENST00000568369.1|FANCA|ENSG00000187741.10|Fanconi anemia, complementation group A 	ENST00000534992.1|FANCA|ENSG00000187741.10|Fanconi anemia, complementation group A 	ENST00000389302.3|FANCA|ENSG00000187741.10|Fanconi anemia, complementation group A 	ENST00000543736.1|FANCA|ENSG00000187741.10|Fanconi anemia, complementation group A
hg19_v2_chr19_-_13030071_13030115	0.0126619	GLI2	ENST00000293695.7|SYCE2|ENSG00000161860.7|synaptonemal complex central element protein 2
hg19_v2_chr1_+_28696111_28696130	0.0121828	GLI2	ENST00000373839.3|PHACTR4|ENSG00000204138.8|phosphatase and actin regulator 4
hg19_v2_chrX_-_152989531_152989568	0.0121296	GLI2	ENST00000458587.2|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31 	ENST00000416815.1|BCAP31|ENSG00000185825.11|B-cell receptor-associated protein 31
hg19_v2_chr5_+_173416162_173416187	0.0118296	GLI2	ENST00000340147.6|C5orf47|ENSG00000185056.9|chromosome 5 open reading frame 47
hg19_v2_chr5_+_172332220_172332371	0.0116708	GLI2	ENST00000518247.1|ERGIC1|ENSG00000113719.11|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 	ENST00000326654.2|ERGIC1|ENSG00000113719.11|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1
hg19_v2_chr1_+_201159914_201159958	0.0116247	GLI2	ENST00000335211.4|IGFN1|ENSG00000163395.12|immunoglobulin-like and fibronectin type III domain containing 1 	ENST00000451870.2|IGFN1|ENSG00000163395.12|immunoglobulin-like and fibronectin type III domain containing 1 	ENST00000295591.8|IGFN1|ENSG00000163395.12|immunoglobulin-like and fibronectin type III domain containing 1
hg19_v2_chr20_-_61051026_61051057	0.0116114	GLI2	ENST00000252997.2|GATA5|ENSG00000130700.6|GATA binding protein 5
hg19_v2_chr4_+_108911036_108911065	0.0113578	GLI2	ENST00000505878.1|HADH|ENSG00000138796.11|hydroxyacyl-CoA dehydrogenase
hg19_v2_chr2_-_172750733_172750762	0.0113318	GLI2	ENST00000392592.4|SLC25A12|ENSG00000115840.9|solute carrier family 25 (aspartate/glutamate carrier), member 12 	ENST00000422440.2|SLC25A12|ENSG00000115840.9|solute carrier family 25 (aspartate/glutamate carrier), member 12
hg19_v2_chr17_+_74734052_74734157	0.0113244	GLI2	ENST00000590514.1|MFSD11|ENSG00000092931.7|major facilitator superfamily domain containing 11
hg19_v2_chr7_+_5465382_5465401	0.0112318	GLI2	ENST00000609130.1|RP11-1275H24.2|ENSG00000272953.1|RP11-1275H24.2
hg19_v2_chr22_+_39378375_39378428	0.010889	GLI2	ENST00000402182.3|APOBEC3B|ENSG00000179750.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B 	ENST00000333467.3|APOBEC3B|ENSG00000179750.11|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B
hg19_v2_chr12_+_57388230_57388282	0.0108556	GLI2	ENST00000300098.1|GPR182|ENSG00000166856.1|G protein-coupled receptor 182
hg19_v2_chr20_+_57466461_57466482	0.0106268	GLI2	ENST00000306090.10|GNAS|ENSG00000087460.19|GNAS complex locus
hg19_v2_chr12_-_56709786_56709846	0.0103587	GLI2	ENST00000547423.1|RP11-977G19.10|ENSG00000144785.4|Uncharacterized protein  	ENST00000551475.1|CNPY2|ENSG00000257727.1|canopy FGF signaling regulator 2 	ENST00000548360.1|RP11-977G19.10|ENSG00000144785.4|Uncharacterized protein
hg19_v2_chr16_-_75241050_75241083	0.0102369	GLI2	ENST00000303037.8|CTRB2|ENSG00000168928.8|chymotrypsinogen B2
hg19_v2_chr2_+_178977143_178977211	0.010043	GLI2	ENST00000286070.5|RBM45|ENSG00000155636.10|RNA binding motif protein 45
hg19_v2_chr10_-_127511790_127511837	0.00977805	GLI2	ENST00000368797.4|UROS|ENSG00000188690.8|uroporphyrinogen III synthase 	ENST00000420761.1|UROS|ENSG00000188690.8|uroporphyrinogen III synthase
hg19_v2_chr16_+_57702099_57702202	0.00971984	GLI2	ENST00000333493.4|GPR97|ENSG00000182885.12|G protein-coupled receptor 97 	ENST00000327655.6|GPR97|ENSG00000182885.12|G protein-coupled receptor 97
hg19_v2_chr2_-_70475586_70475646	0.00970423	GLI2	ENST00000416149.2|TIA1|ENSG00000116001.11|TIA1 cytotoxic granule-associated RNA binding protein
hg19_v2_chr1_-_21606013_21606059	0.00949629	GLI2	ENST00000357071.4|ECE1|ENSG00000117298.10|endothelin converting enzyme 1
hg19_v2_chr10_+_127512106_127512130	0.00947564	GLI2	ENST00000278100.6|BCCIP|ENSG00000107949.12|BRCA2 and CDKN1A interacting protein 	ENST00000299130.3|BCCIP|ENSG00000107949.12|BRCA2 and CDKN1A interacting protein 	ENST00000368759.5|BCCIP|ENSG00000107949.12|BRCA2 and CDKN1A interacting protein 	ENST00000429863.2|BCCIP|ENSG00000107949.12|BRCA2 and CDKN1A interacting protein
hg19_v2_chr12_+_69202975_69203013	0.0090523	GLI2	ENST00000544561.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000393410.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000299252.4|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000360430.2|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000517852.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000545204.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000393413.3|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000350057.5|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000348801.2|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase 	ENST00000478070.1|MDM2|ENSG00000135679.17|MDM2 oncogene, E3 ubiquitin protein ligase
hg19_v2_chr19_+_56989609_56989625	0.00884783	GLI2	ENST00000601875.1|ZNF667-AS1|ENSG00000166770.6|ZNF667 antisense RNA 1 (head to head)
hg19_v2_chr16_-_18801582_18801630	0.00873804	GLI2	ENST00000565420.1|RPS15A|ENSG00000134419.11|ribosomal protein S15a
hg19_v2_chr4_+_107236722_107236767	0.00872328	GLI2	ENST00000442366.1|AIMP1|ENSG00000164022.12|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
hg19_v2_chr18_+_70536215_70536275	0.00870161	GLI2	ENST00000578967.1|RP11-676J15.1|ENSG00000263958.1|RP11-676J15.1
hg19_v2_chr5_-_162887054_162887067	0.0086919	GLI2	ENST00000517501.1|NUDCD2|ENSG00000170584.6|NudC domain containing 2
hg19_v2_chr12_-_57882498_57882509	0.00833157	GLI2	ENST00000550288.1|ARHGAP9|ENSG00000123329.13|Rho GTPase activating protein 9
hg19_v2_chr10_-_35379241_35379294	0.00830163	GLI2	ENST00000374748.1|CUL2|ENSG00000108094.10|cullin 2 	ENST00000374749.3|CUL2|ENSG00000108094.10|cullin 2
hg19_v2_chr5_+_175792459_175792513	0.00815589	GLI2	ENST00000310389.5|ARL10|ENSG00000175414.6|ADP-ribosylation factor-like 10
hg19_v2_chr3_-_4508925_4508965	0.00807487	GLI2	ENST00000534863.1|SUMF1|ENSG00000144455.9|sulfatase modifying factor 1 	ENST00000383843.5|SUMF1|ENSG00000144455.9|sulfatase modifying factor 1 	ENST00000458465.2|SUMF1|ENSG00000144455.9|sulfatase modifying factor 1 	ENST00000405420.2|SUMF1|ENSG00000144455.9|sulfatase modifying factor 1 	ENST00000272902.5|SUMF1|ENSG00000144455.9|sulfatase modifying factor 1
hg19_v2_chr5_-_64920115_64920174	0.0076564	GLI2	ENST00000381018.3|TRIM23|ENSG00000113595.10|tripartite motif containing 23 	ENST00000274327.7|TRIM23|ENSG00000113595.10|tripartite motif containing 23
hg19_v2_chr16_-_2031464_2031550	0.00734403	GLI2	ENST00000356120.4|NOXO1|ENSG00000196408.7|NADPH oxidase organizer 1 	ENST00000354249.4|NOXO1|ENSG00000196408.7|NADPH oxidase organizer 1
hg19_v2_chr3_+_11196206_11196220	0.00718004	GLI2	ENST00000431010.2|HRH1|ENSG00000196639.6|histamine receptor H1
hg19_v2_chr1_+_41707996_41708045	0.00712969	GLI2	ENST00000425554.1|RP11-399E6.1|ENSG00000235358.1|RP11-399E6.1
hg19_v2_chr3_+_54156664_54156694	0.00661877	GLI2	ENST00000474759.1|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3 	ENST00000288197.5|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3
hg19_v2_chr1_-_112531777_112531801	0.00645669	GLI2	ENST00000315987.2|KCND3|ENSG00000171385.5|potassium voltage-gated channel, Shal-related subfamily, member 3 	ENST00000302127.4|KCND3|ENSG00000171385.5|potassium voltage-gated channel, Shal-related subfamily, member 3
hg19_v2_chrX_+_23685563_23685648	0.00618702	GLI2	ENST00000379341.4|PRDX4|ENSG00000123131.8|peroxiredoxin 4
hg19_v2_chr4_-_77069533_77069563	0.0061803	GLI2	ENST00000514987.1|NUP54|ENSG00000138750.10|nucleoporin 54kDa 	ENST00000458189.2|NUP54|ENSG00000138750.10|nucleoporin 54kDa 	ENST00000514901.1|NUP54|ENSG00000138750.10|nucleoporin 54kDa 	ENST00000342467.6|NUP54|ENSG00000138750.10|nucleoporin 54kDa
hg19_v2_chr12_-_10022735_10022735	0.00608078	GLI2	ENST00000228438.2|CLEC2B|ENSG00000110852.4|C-type lectin domain family 2, member B
hg19_v2_chr12_-_123752624_123752835	0.00588777	GLI2	ENST00000542174.1|CDK2AP1|ENSG00000111328.2|cyclin-dependent kinase 2 associated protein 1 	ENST00000535796.1|CDK2AP1|ENSG00000111328.2|cyclin-dependent kinase 2 associated protein 1
hg19_v2_chr6_+_43968306_43968377	0.0057965	GLI2	ENST00000442114.2|C6orf223|ENSG00000181577.11|chromosome 6 open reading frame 223 	ENST00000336600.5|C6orf223|ENSG00000181577.11|chromosome 6 open reading frame 223 	ENST00000439969.2|C6orf223|ENSG00000181577.11|chromosome 6 open reading frame 223
hg19_v2_chr17_+_73089382_73089451	0.00515299	GLI2	ENST00000538213.2|SLC16A5|ENSG00000170190.11|solute carrier family 16 (monocarboxylate transporter), member 5 	ENST00000584118.1|SLC16A5|ENSG00000170190.11|solute carrier family 16 (monocarboxylate transporter), member 5
hg19_v2_chrX_+_23685653_23685681	0.00511905	GLI2	ENST00000379331.3|PRDX4|ENSG00000123131.8|peroxiredoxin 4
hg19_v2_chr10_-_75410771_75410813	0.00506396	GLI2	ENST00000372873.4|SYNPO2L|ENSG00000166317.7|synaptopodin 2-like
hg19_v2_chr5_+_118407053_118407239	0.00502443	GLI2	ENST00000311085.8|DMXL1|ENSG00000172869.10|Dmx-like 1 	ENST00000539542.1|DMXL1|ENSG00000172869.10|Dmx-like 1
hg19_v2_chr13_+_114145310_114145436	0.00491192	GLI2	ENST00000434316.2|TMCO3|ENSG00000150403.13|transmembrane and coiled-coil domains 3 	ENST00000375391.1|TMCO3|ENSG00000150403.13|transmembrane and coiled-coil domains 3
hg19_v2_chr12_-_56709674_56709729	0.00476592	GLI2	ENST00000551286.1|CNPY2|ENSG00000257727.1|canopy FGF signaling regulator 2 	ENST00000549318.1|RP11-977G19.10|ENSG00000144785.4|Uncharacterized protein
hg19_v2_chr19_+_37464063_37464127	0.00475566	GLI2	ENST00000586353.1|ZNF568|ENSG00000198453.8|zinc finger protein 568 	ENST00000433993.1|ZNF568|ENSG00000198453.8|zinc finger protein 568 	ENST00000592567.1|ZNF568|ENSG00000198453.8|zinc finger protein 568
hg19_v2_chr18_+_11751466_11751475	0.0046736	GLI2	ENST00000535121.1|GNAL|ENSG00000141404.11|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type
hg19_v2_chr17_-_61920280_61920425	0.00461264	GLI2	ENST00000448276.2|SMARCD2|ENSG00000108604.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 	ENST00000577990.1|SMARCD2|ENSG00000108604.11|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
hg19_v2_chr6_-_29648887_29648944	0.0045486	GLI2	ENST00000376883.1|ZFP57|ENSG00000204644.5|ZFP57 zinc finger protein
hg19_v2_chr9_-_139658965_139658975	0.00450626	GLI2	ENST00000316144.5|LCN15|ENSG00000177984.6|lipocalin 15
hg19_v2_chr19_-_49314169_49314194	0.00450264	GLI2	ENST00000597011.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial 	ENST00000601681.1|BCAT2|ENSG00000105552.10|branched chain amino-acid transaminase 2, mitochondrial
hg19_v2_chr1_+_26737292_26737322	0.00444575	GLI2	ENST00000254231.4|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr11_-_65374430_65374497	0.00443696	GLI2	ENST00000532507.1|MAP3K11|ENSG00000173327.3|mitogen-activated protein kinase kinase kinase 11
hg19_v2_chr6_-_160210715_160210781	0.00410316	GLI2	ENST00000392168.2|TCP1|ENSG00000120438.7|t-complex 1 	ENST00000321394.7|TCP1|ENSG00000120438.7|t-complex 1
hg19_v2_chr19_+_19144384_19144473	0.00408601	GLI2	ENST00000392335.2|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000535612.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000537263.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000540707.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000541725.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000269932.6|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000546344.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000540792.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000536098.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000541898.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6 	ENST00000543877.1|ARMC6|ENSG00000105676.9|armadillo repeat containing 6
hg19_v2_chr9_+_33265011_33265059	0.00394512	GLI2	ENST00000419016.2|CHMP5|ENSG00000086065.9|charged multivesicular body protein 5
hg19_v2_chr5_+_154238149_154238267	0.00392713	GLI2	ENST00000519430.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000520671.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000521583.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000518028.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000519404.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000519394.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8 	ENST00000518775.1|CNOT8|ENSG00000155508.9|CCR4-NOT transcription complex, subunit 8
hg19_v2_chr19_-_42498369_42498390	0.0039039	GLI2	ENST00000302102.5|ATP1A3|ENSG00000105409.11|ATPase, Na+/K+ transporting, alpha 3 polypeptide 	ENST00000545399.1|ATP1A3|ENSG00000105409.11|ATPase, Na+/K+ transporting, alpha 3 polypeptide
hg19_v2_chr1_-_160549235_160549306	0.00388736	GLI2	ENST00000368054.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000368048.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000311224.4|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000368051.3|CD84|ENSG00000066294.10|CD84 molecule 	ENST00000534968.1|CD84|ENSG00000066294.10|CD84 molecule
hg19_v2_chr3_+_54157480_54157547	0.00387346	GLI2	ENST00000490478.1|CACNA2D3|ENSG00000157445.10|calcium channel, voltage-dependent, alpha 2/delta subunit 3
hg19_v2_chr4_-_84376953_84377040	0.00385119	GLI2	ENST00000510985.1|HELQ|ENSG00000163312.6|helicase, POLQ-like 	ENST00000295488.3|HELQ|ENSG00000163312.6|helicase, POLQ-like
hg19_v2_chr9_+_140149625_140149674	0.00365835	GLI2	ENST00000343053.4|NELFB|ENSG00000188986.4|negative elongation factor complex member B
hg19_v2_chr6_-_121655593_121655661	0.00339227	GLI2	ENST00000398212.2|TBC1D32|ENSG00000146350.9|TBC1 domain family, member 32
hg19_v2_chr6_+_44214824_44214841	0.00321378	GLI2	ENST00000371646.5|HSP90AB1|ENSG00000096384.15|heat shock protein 90kDa alpha (cytosolic), class B member 1 	ENST00000353801.3|HSP90AB1|ENSG00000096384.15|heat shock protein 90kDa alpha (cytosolic), class B member 1
hg19_v2_chr19_+_50180409_50180501	0.0031487	GLI2	ENST00000391851.4|PRMT1|ENSG00000126457.16|protein arginine methyltransferase 1
hg19_v2_chr19_-_12941215_12941230	0.00293508	GLI2	ENST00000458671.2|RTBDN|ENSG00000132026.9|retbindin
hg19_v2_chr20_+_30640004_30640091	0.00232101	GLI2	ENST00000520553.1|HCK|ENSG00000101336.8|hemopoietic cell kinase 	ENST00000518730.1|HCK|ENSG00000101336.8|hemopoietic cell kinase 	ENST00000375852.2|HCK|ENSG00000101336.8|hemopoietic cell kinase
hg19_v2_chr12_-_43945724_43945724	0.00225008	GLI2	ENST00000389420.3|ADAMTS20|ENSG00000173157.12|ADAM metallopeptidase with thrombospondin type 1 motif, 20 	ENST00000553158.1|ADAMTS20|ENSG00000173157.12|ADAM metallopeptidase with thrombospondin type 1 motif, 20
hg19_v2_chr4_-_71705027_71705051	0.00184122	GLI2	ENST00000545193.1|GRSF1|ENSG00000132463.9|G-rich RNA sequence binding factor 1
hg19_v2_chr14_-_105262055_105262107	0.00171561	GLI2	ENST00000349310.3|AKT1|ENSG00000142208.11|v-akt murine thymoma viral oncogene homolog 1
hg19_v2_chr15_+_52311398_52311461	0.00154674	GLI2	ENST00000261845.5|MAPK6|ENSG00000069956.7|mitogen-activated protein kinase 6
hg19_v2_chr5_+_41925325_41925416	0.00138693	GLI2	ENST00000296812.2|FBXO4|ENSG00000151876.8|F-box protein 4 	ENST00000281623.3|FBXO4|ENSG00000151876.8|F-box protein 4 	ENST00000509134.1|FBXO4|ENSG00000151876.8|F-box protein 4
hg19_v2_chr17_+_29248918_29248950	0.00128194	GLI2	ENST00000581548.1|ADAP2|ENSG00000184060.6|ArfGAP with dual PH domains 2 	ENST00000580525.1|ADAP2|ENSG00000184060.6|ArfGAP with dual PH domains 2
hg19_v2_chr16_-_18801643_18801705	0.000942104	GLI2	ENST00000322989.4|RPS15A|ENSG00000134419.11|ribosomal protein S15a 	ENST00000563390.1|RPS15A|ENSG00000134419.11|ribosomal protein S15a
hg19_v2_chr9_-_131709858_131709919	0.00091141	GLI2	ENST00000372586.3|DOLK|ENSG00000175283.7|dolichol kinase
hg19_v2_chr4_-_82393009_82393044	0.000856785	GLI2	ENST00000436139.2|RASGEF1B|ENSG00000138670.12|RasGEF domain family, member 1B
hg19_v2_chr7_-_994302_994333	0.000689177	GLI2	ENST00000265846.5|ADAP1|ENSG00000105963.9|ArfGAP with dual PH domains 1
hg19_v2_chr17_-_7137857_7137869	0.000526565	GLI2	ENST00000005340.5|DVL2|ENSG00000004975.7|dishevelled segment polarity protein 2
hg19_v2_chr17_-_26876350_26876417	0.000483012	GLI2	ENST00000470125.1|UNC119|ENSG00000109103.7|unc-119 homolog (C. elegans)
hg19_v2_chr7_-_97881429_97881563	6.03677e-05	GLI2	ENST00000420697.1|TECPR1|ENSG00000205356.5|tectonin beta-propeller repeat containing 1 	ENST00000379795.3|TECPR1|ENSG00000205356.5|tectonin beta-propeller repeat containing 1 	ENST00000415086.1|TECPR1|ENSG00000205356.5|tectonin beta-propeller repeat containing 1 	ENST00000542604.1|TECPR1|ENSG00000205356.5|tectonin beta-propeller repeat containing 1 	ENST00000447648.2|TECPR1|ENSG00000205356.5|tectonin beta-propeller repeat containing 1
