hg19_v2_chr13_-_39564993_39565002	2.67939	FOXA2_FOXJ3	ENST00000423210.1|STOML3|ENSG00000133115.7|stomatin (EPB72)-like 3
hg19_v2_chr13_-_61989655_61989655	1.78994	FOXA2_FOXJ3	ENST00000409204.4|PCDH20|ENSG00000197991.10|protocadherin 20
hg19_v2_chr5_-_110062384_110062450	1.66302	FOXA2_FOXJ3	ENST00000429839.2|TMEM232|ENSG00000186952.10|transmembrane protein 232
hg19_v2_chr5_-_110062349_110062380	1.65302	FOXA2_FOXJ3	ENST00000511883.2|TMEM232|ENSG00000186952.10|transmembrane protein 232 	ENST00000455884.2|TMEM232|ENSG00000186952.10|transmembrane protein 232
hg19_v2_chr11_-_114466471_114466474	1.65213	FOXA2_FOXJ3	ENST00000424261.2|NXPE4|ENSG00000137634.5|neurexophilin and PC-esterase domain family, member 4
hg19_v2_chr4_+_70861647_70861691	1.55468	FOXA2_FOXJ3	ENST00000246895.4|STATH|ENSG00000126549.5|statherin 	ENST00000381060.2|STATH|ENSG00000126549.5|statherin
hg19_v2_chr4_+_165675197_165675216	1.42824	FOXA2_FOXJ3	ENST00000515485.1|RP11-294O2.2|ENSG00000248771.1|RP11-294O2.2
hg19_v2_chr12_-_68696652_68696661	1.26875	FOXA2_FOXJ3	ENST00000539972.1|MDM1|ENSG00000111554.10|Mdm1 nuclear protein homolog (mouse)
hg19_v2_chr2_+_233527443_233527542	1.26374	FOXA2_FOXJ3	ENST00000410095.1|EFHD1|ENSG00000115468.7|EF-hand domain family, member D1
hg19_v2_chr4_+_165675269_165675289	1.09324	FOXA2_FOXJ3	ENST00000507311.1|RP11-294O2.2|ENSG00000248771.1|RP11-294O2.2
hg19_v2_chr12_+_49297899_49297955	0.977965	FOXA2_FOXJ3	ENST00000552942.1|CCDC65|ENSG00000139537.6|coiled-coil domain containing 65 	ENST00000320516.4|CCDC65|ENSG00000139537.6|coiled-coil domain containing 65
hg19_v2_chrX_-_65259914_65259967	0.975844	FOXA2_FOXJ3	ENST00000374737.4|VSIG4|ENSG00000155659.10|V-set and immunoglobulin domain containing 4 	ENST00000455586.2|VSIG4|ENSG00000155659.10|V-set and immunoglobulin domain containing 4
hg19_v2_chrX_-_65259900_65259909	0.960261	FOXA2_FOXJ3	ENST00000412866.2|VSIG4|ENSG00000155659.10|V-set and immunoglobulin domain containing 4
hg19_v2_chr11_-_114466477_114466489	0.926482	FOXA2_FOXJ3	ENST00000375478.3|NXPE4|ENSG00000137634.5|neurexophilin and PC-esterase domain family, member 4
hg19_v2_chr2_+_58655461_58655492	0.890089	FOXA2_FOXJ3	ENST00000429095.1|AC007092.1|ENSG00000233723.3|long intergenic non-protein coding RNA 1122 	ENST00000429664.1|AC007092.1|ENSG00000233723.3|long intergenic non-protein coding RNA 1122 	ENST00000452840.1|AC007092.1|ENSG00000233723.3|long intergenic non-protein coding RNA 1122
hg19_v2_chr1_-_207095324_207095357	0.845306	FOXA2_FOXJ3	ENST00000530505.1|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3 	ENST00000367091.3|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3 	ENST00000442471.2|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3
hg19_v2_chr3_-_150920979_150921009	0.816011	FOXA2_FOXJ3	ENST00000309180.5|GPR171|ENSG00000174946.5|G protein-coupled receptor 171 	ENST00000480322.1|GPR171|ENSG00000174946.5|G protein-coupled receptor 171
hg19_v2_chr9_+_27109392_27109435	0.793874	FOXA2_FOXJ3	ENST00000406359.4|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chr17_-_39203519_39203568	0.763682	FOXA2_FOXJ3	ENST00000542137.1|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1 	ENST00000391419.3|KRTAP2-1|ENSG00000212725.3|keratin associated protein 2-1
hg19_v2_chr3_+_69928256_69928385	0.759633	FOXA2_FOXJ3	ENST00000394355.2|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chrX_+_9431324_9431371	0.755762	FOXA2_FOXJ3	ENST00000407597.2|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000424279.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000536365.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000441088.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000380961.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000415293.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked
hg19_v2_chr8_+_36641842_36641902	0.74751	FOXA2_FOXJ3	ENST00000523973.1|KCNU1|ENSG00000215262.3|potassium channel, subfamily U, member 1 	ENST00000399881.3|KCNU1|ENSG00000215262.3|potassium channel, subfamily U, member 1
hg19_v2_chr6_+_12717892_12717903	0.746276	FOXA2_FOXJ3	ENST00000379350.1|PHACTR1|ENSG00000112137.12|phosphatase and actin regulator 1
hg19_v2_chr5_+_140529630_140529683	0.679689	FOXA2_FOXJ3	ENST00000543635.1|PCDHB6|ENSG00000113211.3|protocadherin beta 6
hg19_v2_chrX_+_119029800_119029936	0.679118	FOXA2_FOXJ3	ENST00000371431.3|AKAP14|ENSG00000186471.8|A kinase (PRKA) anchor protein 14 	ENST00000371423.2|AKAP14|ENSG00000186471.8|A kinase (PRKA) anchor protein 14 	ENST00000371425.4|AKAP14|ENSG00000186471.8|A kinase (PRKA) anchor protein 14 	ENST00000394594.2|AKAP14|ENSG00000186471.8|A kinase (PRKA) anchor protein 14
hg19_v2_chr10_+_97759848_97759883	0.665187	FOXA2_FOXJ3	ENST00000424464.1|CC2D2B|ENSG00000188649.7|coiled-coil and C2 domain containing 2B 	ENST00000410012.2|CC2D2B|ENSG00000188649.7|coiled-coil and C2 domain containing 2B 	ENST00000344386.3|CC2D2B|ENSG00000188649.7|coiled-coil and C2 domain containing 2B
hg19_v2_chr4_-_138453606_138453673	0.633455	FOXA2_FOXJ3	ENST00000412923.2|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000344876.4|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000507846.1|PCDH18|ENSG00000189184.7|protocadherin 18 	ENST00000510305.1|PCDH18|ENSG00000189184.7|protocadherin 18
hg19_v2_chr4_-_23735183_23735202	0.603936	FOXA2_FOXJ3	ENST00000507666.1|RP11-380P13.2|ENSG00000251292.1|RP11-380P13.2
hg19_v2_chr5_+_94727048_94727074	0.584877	FOXA2_FOXJ3	ENST00000283357.5|FAM81B|ENSG00000153347.5|family with sequence similarity 81, member B
hg19_v2_chr16_-_67597789_67597861	0.583551	FOXA2_FOXJ3	ENST00000605277.1|CTD-2012K14.6|ENSG00000261386.2|CTD-2012K14.6
hg19_v2_chr4_-_70518941_70518967	0.581819	FOXA2_FOXJ3	ENST00000286604.4|UGT2A1|ENSG00000173610.7|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus 	ENST00000505512.1|UGT2A1|ENSG00000173610.7|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus 	ENST00000514019.1|UGT2A1|ENSG00000270386.1|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus
hg19_v2_chr2_+_162272605_162272753	0.579787	FOXA2_FOXJ3	ENST00000389554.3|TBR1|ENSG00000136535.10|T-box, brain, 1
hg19_v2_chr6_-_87804815_87804830	0.576919	FOXA2_FOXJ3	ENST00000369582.2|CGA|ENSG00000135346.4|glycoprotein hormones, alpha polypeptide
hg19_v2_chr1_+_227127981_227128012	0.568799	FOXA2_FOXJ3	ENST00000366778.1|ADCK3|ENSG00000163050.12|aarF domain containing kinase 3 	ENST00000366777.3|ADCK3|ENSG00000163050.12|aarF domain containing kinase 3 	ENST00000458507.2|ADCK3|ENSG00000163050.12|aarF domain containing kinase 3
hg19_v2_chr9_+_124922171_124922224	0.560664	FOXA2_FOXJ3	ENST00000373764.3|MORN5|ENSG00000185681.8|MORN repeat containing 5 	ENST00000536616.1|MORN5|ENSG00000185681.8|MORN repeat containing 5
hg19_v2_chr1_-_151345159_151345209	0.552481	FOXA2_FOXJ3	ENST00000458566.1|SELENBP1|ENSG00000143416.16|selenium binding protein 1 	ENST00000447402.3|SELENBP1|ENSG00000143416.16|selenium binding protein 1 	ENST00000426705.2|SELENBP1|ENSG00000143416.16|selenium binding protein 1 	ENST00000435071.1|SELENBP1|ENSG00000143416.16|selenium binding protein 1 	ENST00000368868.5|SELENBP1|ENSG00000143416.16|selenium binding protein 1
hg19_v2_chr1_+_86934526_86934578	0.5338	FOXA2_FOXJ3	ENST00000394711.1|CLCA1|ENSG00000016490.11|chloride channel accessory 1
hg19_v2_chr17_-_30185946_30185970	0.523033	FOXA2_FOXJ3	ENST00000579741.1|COPRS|ENSG00000172301.6|coordinator of PRMT5, differentiation stimulator
hg19_v2_chrX_-_108725301_108725319	0.515762	FOXA2_FOXJ3	ENST00000218006.2|GUCY2F|ENSG00000101890.4|guanylate cyclase 2F, retinal
hg19_v2_chr7_-_37026108_37026145	0.507342	FOXA2_FOXJ3	ENST00000396045.3|ELMO1|ENSG00000155849.11|engulfment and cell motility 1
hg19_v2_chr1_-_216978709_216978728	0.49936	FOXA2_FOXJ3	ENST00000360012.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr12_+_54378923_54378970	0.49517	FOXA2_FOXJ3	ENST00000303460.4|HOXC10|ENSG00000180818.4|homeobox C10
hg19_v2_chr5_+_140186647_140186773	0.488834	FOXA2_FOXJ3	ENST00000512229.2|PCDHA4|ENSG00000204967.6|protocadherin alpha 4 	ENST00000356878.4|PCDHA4|ENSG00000204967.6|protocadherin alpha 4 	ENST00000530339.1|PCDHA4|ENSG00000204967.6|protocadherin alpha 4
hg19_v2_chr12_-_12837423_12837501	0.478628	FOXA2_FOXJ3	ENST00000540510.1|GPR19|ENSG00000183150.3|G protein-coupled receptor 19
hg19_v2_chr14_+_105267250_105267250	0.470763	FOXA2_FOXJ3	ENST00000342537.7|ZBTB42|ENSG00000179627.9|zinc finger and BTB domain containing 42
hg19_v2_chr1_-_207095212_207095278	0.470309	FOXA2_FOXJ3	ENST00000420007.2|FAIM3|ENSG00000162894.7|Fas apoptotic inhibitory molecule 3
hg19_v2_chr10_-_69597915_69597926	0.469606	FOXA2_FOXJ3	ENST00000225171.2|DNAJC12|ENSG00000108176.10|DnaJ (Hsp40) homolog, subfamily C, member 12
hg19_v2_chr1_+_3607228_3607250	0.452648	FOXA2_FOXJ3	ENST00000378285.1|TP73|ENSG00000078900.10|tumor protein p73 	ENST00000378280.1|TP73|ENSG00000078900.10|tumor protein p73 	ENST00000378288.4|TP73|ENSG00000078900.10|tumor protein p73
hg19_v2_chr12_+_49297887_49297898	0.450742	FOXA2_FOXJ3	ENST00000266984.5|CCDC65|ENSG00000139537.6|coiled-coil domain containing 65
hg19_v2_chr1_-_160492994_160493057	0.442149	FOXA2_FOXJ3	ENST00000368055.1|SLAMF6|ENSG00000162739.9|SLAM family member 6 	ENST00000368057.3|SLAMF6|ENSG00000162739.9|SLAM family member 6 	ENST00000368059.3|SLAMF6|ENSG00000162739.9|SLAM family member 6
hg19_v2_chr1_+_150122034_150122170	0.441661	FOXA2_FOXJ3	ENST00000025469.6|PLEKHO1|ENSG00000023902.9|pleckstrin homology domain containing, family O member 1 	ENST00000369124.4|PLEKHO1|ENSG00000023902.9|pleckstrin homology domain containing, family O member 1
hg19_v2_chr17_-_30185971_30186093	0.438709	FOXA2_FOXJ3	ENST00000378634.2|COPRS|ENSG00000172301.6|coordinator of PRMT5, differentiation stimulator
hg19_v2_chr18_-_24765248_24765281	0.432908	FOXA2_FOXJ3	ENST00000580774.1|CHST9|ENSG00000154080.8|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9 	ENST00000284224.8|CHST9|ENSG00000154080.8|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
hg19_v2_chr16_+_10479906_10479925	0.411095	FOXA2_FOXJ3	ENST00000562527.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000396560.2|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000396559.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000562102.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000543967.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000569939.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2 	ENST00000569900.1|ATF7IP2|ENSG00000166669.9|activating transcription factor 7 interacting protein 2
hg19_v2_chr15_+_78857870_78857913	0.408779	FOXA2_FOXJ3	ENST00000559554.1|CHRNA5|ENSG00000169684.9|cholinergic receptor, nicotinic, alpha 5 (neuronal)
hg19_v2_chr10_+_96698406_96698428	0.402264	FOXA2_FOXJ3	ENST00000260682.6|CYP2C9|ENSG00000138109.9|cytochrome P450, family 2, subfamily C, polypeptide 9
hg19_v2_chr9_+_120466610_120466628	0.392833	FOXA2_FOXJ3	ENST00000394487.4|TLR4|ENSG00000136869.13|toll-like receptor 4
hg19_v2_chr10_+_7745232_7745295	0.3903	FOXA2_FOXJ3	ENST00000358415.4|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v2_chr12_-_15374343_15374416	0.387044	FOXA2_FOXJ3	ENST00000256953.2|RERG|ENSG00000134533.2|RAS-like, estrogen-regulated, growth inhibitor 	ENST00000546331.1|RERG|ENSG00000134533.2|RAS-like, estrogen-regulated, growth inhibitor
hg19_v2_chr4_-_76008706_76008878	0.386082	FOXA2_FOXJ3	ENST00000562355.1|RP11-44F21.5|ENSG00000260265.1|RP11-44F21.5	ENST00000563602.1|RP11-44F21.5|ENSG00000260265.1|RP11-44F21.5
hg19_v2_chr19_+_56687374_56687389	0.380679	FOXA2_FOXJ3	ENST00000357330.2|GALP|ENSG00000197487.4|galanin-like peptide 	ENST00000440823.1|GALP|ENSG00000197487.4|galanin-like peptide
hg19_v2_chr3_-_107941209_107941227	0.373753	FOXA2_FOXJ3	ENST00000492106.1|IFT57|ENSG00000114446.4|intraflagellar transport 57 homolog (Chlamydomonas)
hg19_v2_chr16_-_28634874_28634907	0.370698	FOXA2_FOXJ3	ENST00000395609.1|SULT1A1|ENSG00000196502.7|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1 	ENST00000350842.4|SULT1A1|ENSG00000196502.7|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
hg19_v2_chr8_-_40755333_40755352	0.369935	FOXA2_FOXJ3	ENST00000297737.6|ZMAT4|ENSG00000165061.10|zinc finger, matrin-type 4 	ENST00000315769.7|ZMAT4|ENSG00000165061.10|zinc finger, matrin-type 4
hg19_v2_chr5_-_13944652_13944652	0.368315	FOXA2_FOXJ3	ENST00000265104.4|DNAH5|ENSG00000039139.9|dynein, axonemal, heavy chain 5
hg19_v2_chr4_+_26862313_26862334	0.360155	FOXA2_FOXJ3	ENST00000467087.1|STIM2|ENSG00000109689.10|stromal interaction molecule 2 	ENST00000382009.3|STIM2|ENSG00000109689.10|stromal interaction molecule 2 	ENST00000237364.5|STIM2|ENSG00000109689.10|stromal interaction molecule 2
hg19_v2_chr16_-_86542455_86542500	0.355859	FOXA2_FOXJ3	ENST00000595886.1|FENDRR|ENSG00000268388.1|FOXF1 adjacent non-coding developmental regulatory RNA 	ENST00000597578.1|FENDRR|ENSG00000268388.1|FOXF1 adjacent non-coding developmental regulatory RNA 	ENST00000593604.1|FENDRR|ENSG00000268388.1|FOXF1 adjacent non-coding developmental regulatory RNA
hg19_v2_chr12_-_122107549_122107572	0.354969	FOXA2_FOXJ3	ENST00000355329.3|MORN3|ENSG00000139714.8|MORN repeat containing 3
hg19_v2_chr7_+_123485102_123485223	0.353463	FOXA2_FOXJ3	ENST00000488323.1|HYAL4|ENSG00000106302.5|hyaluronoglucosaminidase 4 	ENST00000223026.4|HYAL4|ENSG00000106302.5|hyaluronoglucosaminidase 4
hg19_v2_chr4_-_100212132_100212185	0.352441	FOXA2_FOXJ3	ENST00000209668.2|ADH1A|ENSG00000187758.3|alcohol dehydrogenase 1A (class I), alpha polypeptide
hg19_v2_chr17_+_7487146_7487211	0.35021	FOXA2_FOXJ3	ENST00000396501.4|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000584378.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000423172.2|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000579445.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000585217.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1 	ENST00000581380.1|MPDU1|ENSG00000129255.10|mannose-P-dolichol utilization defect 1
hg19_v2_chr12_+_59989918_59989965	0.346664	FOXA2_FOXJ3	ENST00000547379.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7 	ENST00000549465.1|SLC16A7|ENSG00000118596.7|solute carrier family 16 (monocarboxylate transporter), member 7
hg19_v2_chr1_+_3614591_3614622	0.343328	FOXA2_FOXJ3	ENST00000378290.4|TP73|ENSG00000078900.10|tumor protein p73
hg19_v2_chr3_-_58523010_58523078	0.342579	FOXA2_FOXJ3	ENST00000459701.2|ACOX2|ENSG00000168306.8|acyl-CoA oxidase 2, branched chain 	ENST00000302819.5|ACOX2|ENSG00000168306.8|acyl-CoA oxidase 2, branched chain
hg19_v2_chr6_+_26501449_26501449	0.342337	FOXA2_FOXJ3	ENST00000244513.6|BTN1A1|ENSG00000124557.8|butyrophilin, subfamily 1, member A1
hg19_v2_chr14_-_24020858_24020988	0.337634	FOXA2_FOXJ3	ENST00000419474.3|ZFHX2|ENSG00000136367.12|zinc finger homeobox 2
hg19_v2_chr9_+_108463234_108463265	0.333943	FOXA2_FOXJ3	ENST00000374688.1|TMEM38B|ENSG00000095209.7|transmembrane protein 38B
hg19_v2_chr15_+_71185148_71185214	0.331688	FOXA2_FOXJ3	ENST00000443425.2|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49 	ENST00000560755.1|LRRC49|ENSG00000137821.7|leucine rich repeat containing 49
hg19_v2_chr7_-_25702669_25702678	0.329555	FOXA2_FOXJ3	ENST00000446840.1|AC003090.1|ENSG00000223561.2|AC003090.1
hg19_v2_chr12_-_51718436_51718458	0.329496	FOXA2_FOXJ3	ENST00000544402.1|BIN2|ENSG00000110934.6|bridging integrator 2
hg19_v2_chr3_-_108836977_108836989	0.329147	FOXA2_FOXJ3	ENST00000232603.5|MORC1|ENSG00000114487.5|MORC family CW-type zinc finger 1
hg19_v2_chr19_-_48614033_48614048	0.324044	FOXA2_FOXJ3	ENST00000354276.3|PLA2G4C|ENSG00000105499.9|phospholipase A2, group IVC (cytosolic, calcium-independent)
hg19_v2_chr16_+_6069586_6069602	0.323574	FOXA2_FOXJ3	ENST00000547372.1|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1
hg19_v2_chr19_-_48614063_48614093	0.322557	FOXA2_FOXJ3	ENST00000599921.1|PLA2G4C|ENSG00000105499.9|phospholipase A2, group IVC (cytosolic, calcium-independent) 	ENST00000599111.1|PLA2G4C|ENSG00000105499.9|phospholipase A2, group IVC (cytosolic, calcium-independent)
hg19_v2_chr6_+_26217159_26217170	0.31207	FOXA2_FOXJ3	ENST00000303910.2|HIST1H2AE|ENSG00000168274.3|histone cluster 1, H2ae
hg19_v2_chr1_+_26036093_26036093	0.310962	FOXA2_FOXJ3	ENST00000374329.1|MAN1C1|ENSG00000117643.10|mannosidase, alpha, class 1C, member 1
hg19_v2_chr2_+_98962618_98962651	0.305063	FOXA2_FOXJ3	ENST00000393504.1|CNGA3|ENSG00000144191.7|cyclic nucleotide gated channel alpha 3 	ENST00000436404.2|CNGA3|ENSG00000144191.7|cyclic nucleotide gated channel alpha 3
hg19_v2_chr17_-_29641084_29641103	0.303188	FOXA2_FOXJ3	ENST00000544462.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr6_-_80247105_80247133	0.302096	FOXA2_FOXJ3	ENST00000369846.4|LCA5|ENSG00000135338.9|Leber congenital amaurosis 5
hg19_v2_chr4_+_159236462_159236471	0.302031	FOXA2_FOXJ3	ENST00000460056.2|RXFP1|ENSG00000171509.11|relaxin/insulin-like family peptide receptor 1
hg19_v2_chr17_-_60883993_60884014	0.301769	FOXA2_FOXJ3	ENST00000583803.1|MARCH10|ENSG00000173838.7|membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase 	ENST00000456609.2|MARCH10|ENSG00000173838.7|membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase
hg19_v2_chr2_-_128615681_128615737	0.300959	FOXA2_FOXJ3	ENST00000409955.1|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D 	ENST00000272645.4|POLR2D|ENSG00000144231.6|polymerase (RNA) II (DNA directed) polypeptide D
hg19_v2_chr1_+_246729724_246729794	0.300548	FOXA2_FOXJ3	ENST00000366513.4|CNST|ENSG00000162852.9|consortin, connexin sorting protein 	ENST00000366512.3|CNST|ENSG00000162852.9|consortin, connexin sorting protein
hg19_v2_chr3_-_187455680_187455732	0.29939	FOXA2_FOXJ3	ENST00000438077.1|BCL6|ENSG00000113916.13|B-cell CLL/lymphoma 6
hg19_v2_chr3_+_132316081_132316102	0.29816	FOXA2_FOXJ3	ENST00000249887.2|ACKR4|ENSG00000129048.6|atypical chemokine receptor 4
hg19_v2_chr8_-_72459885_72459896	0.296994	FOXA2_FOXJ3	ENST00000523987.1|RP11-1102P16.1|ENSG00000253379.1|Uncharacterized protein
hg19_v2_chr15_+_78857849_78857869	0.292761	FOXA2_FOXJ3	ENST00000299565.5|CHRNA5|ENSG00000169684.9|cholinergic receptor, nicotinic, alpha 5 (neuronal)
hg19_v2_chr9_-_86432547_86432699	0.291196	FOXA2_FOXJ3	ENST00000376365.3|GKAP1|ENSG00000165113.8|G kinase anchoring protein 1 	ENST00000376371.2|GKAP1|ENSG00000165113.8|G kinase anchoring protein 1
hg19_v2_chr19_-_14992264_14992264	0.287643	FOXA2_FOXJ3	ENST00000327462.2|OR7A17|ENSG00000185385.2|olfactory receptor, family 7, subfamily A, member 17
hg19_v2_chr14_+_102276192_102276208	0.287025	FOXA2_FOXJ3	ENST00000557714.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr2_+_12857043_12857127	0.286489	FOXA2_FOXJ3	ENST00000381465.2|TRIB2|ENSG00000071575.7|tribbles pseudokinase 2
hg19_v2_chr11_+_60260248_60260273	0.283477	FOXA2_FOXJ3	ENST00000526784.1|MS4A12|ENSG00000071203.5|membrane-spanning 4-domains, subfamily A, member 12 	ENST00000016913.4|MS4A12|ENSG00000071203.5|membrane-spanning 4-domains, subfamily A, member 12 	ENST00000537076.1|MS4A12|ENSG00000071203.5|membrane-spanning 4-domains, subfamily A, member 12 	ENST00000530007.1|MS4A12|ENSG00000071203.5|membrane-spanning 4-domains, subfamily A, member 12
hg19_v2_chr6_-_80247140_80247175	0.277735	FOXA2_FOXJ3	ENST00000392959.1|LCA5|ENSG00000135338.9|Leber congenital amaurosis 5 	ENST00000467898.3|LCA5|ENSG00000135338.9|Leber congenital amaurosis 5
hg19_v2_chr11_+_71791359_71791387	0.277546	FOXA2_FOXJ3	ENST00000419228.1|LRTOMT|ENSG00000184154.8|leucine rich transmembrane and O-methyltransferase domain containing 	ENST00000435085.1|LRTOMT|ENSG00000184154.8|leucine rich transmembrane and O-methyltransferase domain containing 	ENST00000307198.7|LRTOMT|ENSG00000184154.8|leucine rich transmembrane and O-methyltransferase domain containing 	ENST00000538413.1|LRTOMT|ENSG00000184154.8|leucine rich transmembrane and O-methyltransferase domain containing
hg19_v2_chr4_+_71494461_71494461	0.277453	FOXA2_FOXJ3	ENST00000396073.3|ENAM|ENSG00000132464.7|enamelin
hg19_v2_chr10_-_99094458_99094500	0.276901	FOXA2_FOXJ3	ENST00000371019.2|FRAT2|ENSG00000181274.5|frequently rearranged in advanced T-cell lymphomas 2
hg19_v2_chr13_-_38443860_38443939	0.2764	FOXA2_FOXJ3	ENST00000426868.2|TRPC4|ENSG00000133107.10|transient receptor potential cation channel, subfamily C, member 4 	ENST00000379681.3|TRPC4|ENSG00000133107.10|transient receptor potential cation channel, subfamily C, member 4 	ENST00000338947.5|TRPC4|ENSG00000133107.10|transient receptor potential cation channel, subfamily C, member 4 	ENST00000355779.2|TRPC4|ENSG00000133107.10|transient receptor potential cation channel, subfamily C, member 4 	ENST00000358477.2|TRPC4|ENSG00000133107.10|transient receptor potential cation channel, subfamily C, member 4 	ENST00000379673.2|TRPC4|ENSG00000133107.10|transient receptor potential cation channel, subfamily C, member 4
hg19_v2_chr2_+_109223595_109223617	0.275142	FOXA2_FOXJ3	ENST00000410093.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr8_-_101321584_101321754	0.272863	FOXA2_FOXJ3	ENST00000523167.1|RNF19A|ENSG00000034677.7|ring finger protein 19A, RBR E3 ubiquitin protein ligase
hg19_v2_chr12_-_49582978_49583107	0.270829	FOXA2_FOXJ3	ENST00000301071.7|TUBA1A|ENSG00000167552.9|tubulin, alpha 1a
hg19_v2_chr1_-_77685084_77685122	0.270435	FOXA2_FOXJ3	ENST00000370812.3|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K 	ENST00000359130.1|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K 	ENST00000445065.1|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K 	ENST00000370813.5|PIGK|ENSG00000142892.10|phosphatidylinositol glycan anchor biosynthesis, class K
hg19_v2_chr1_-_157811588_157811604	0.27027	FOXA2_FOXJ3	ENST00000368174.4|CD5L|ENSG00000073754.5|CD5 molecule-like
hg19_v2_chr16_+_24857162_24857302	0.267609	FOXA2_FOXJ3	ENST00000347898.3|SLC5A11|ENSG00000158865.8|solute carrier family 5 (sodium/inositol cotransporter), member 11
hg19_v2_chr17_-_41985096_41985139	0.265775	FOXA2_FOXJ3	ENST00000269095.4|MPP2|ENSG00000108852.10|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) 	ENST00000523220.1|MPP2|ENSG00000108852.10|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
hg19_v2_chr6_+_140175987_140176056	0.25969	FOXA2_FOXJ3	ENST00000414038.1|RP5-899B16.1|ENSG00000231426.1|RP5-899B16.1	ENST00000431609.1|RP5-899B16.1|ENSG00000231426.1|RP5-899B16.1
hg19_v2_chr1_-_246729544_246729626	0.258275	FOXA2_FOXJ3	ENST00000544618.1|TFB2M|ENSG00000162851.6|transcription factor B2, mitochondrial 	ENST00000366514.4|TFB2M|ENSG00000162851.6|transcription factor B2, mitochondrial
hg19_v2_chr2_+_65283506_65283527	0.257463	FOXA2_FOXJ3	ENST00000377990.2|CEP68|ENSG00000011523.9|centrosomal protein 68kDa
hg19_v2_chr3_+_132036207_132036218	0.25238	FOXA2_FOXJ3	ENST00000336375.5|ACPP|ENSG00000014257.11|acid phosphatase, prostate 	ENST00000495911.1|ACPP|ENSG00000014257.11|acid phosphatase, prostate
hg19_v2_chr4_+_89206076_89206103	0.251182	FOXA2_FOXJ3	ENST00000500009.2|RP11-10L7.1|ENSG00000246375.2|RP11-10L7.1
hg19_v2_chr3_+_148447887_148447911	0.249186	FOXA2_FOXJ3	ENST00000475347.1|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1 	ENST00000474935.1|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1 	ENST00000461609.1|AGTR1|ENSG00000144891.13|angiotensin II receptor, type 1
hg19_v2_chr3_+_171561127_171561306	0.245895	FOXA2_FOXJ3	ENST00000334567.5|TMEM212|ENSG00000186329.5|transmembrane protein 212 	ENST00000450693.1|TMEM212|ENSG00000186329.5|transmembrane protein 212
hg19_v2_chr7_+_151038850_151038915	0.245229	FOXA2_FOXJ3	ENST00000355851.4|NUB1|ENSG00000013374.11|negative regulator of ubiquitin-like proteins 1 	ENST00000566856.1|NUB1|ENSG00000013374.11|negative regulator of ubiquitin-like proteins 1 	ENST00000470229.1|NUB1|ENSG00000013374.11|negative regulator of ubiquitin-like proteins 1
hg19_v2_chr4_+_184826418_184826522	0.245096	FOXA2_FOXJ3	ENST00000308497.4|STOX2|ENSG00000173320.5|storkhead box 2 	ENST00000438269.1|STOX2|ENSG00000173320.5|storkhead box 2
hg19_v2_chr19_-_9546177_9546224	0.244235	FOXA2_FOXJ3	ENST00000592292.1|ZNF266|ENSG00000174652.13|zinc finger protein 266 	ENST00000588221.1|ZNF266|ENSG00000174652.13|zinc finger protein 266
hg19_v2_chr7_-_6098770_6098861	0.241749	FOXA2_FOXJ3	ENST00000536084.1|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1 	ENST00000446699.1|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1 	ENST00000199389.6|EIF2AK1|ENSG00000086232.8|eukaryotic translation initiation factor 2-alpha kinase 1
hg19_v2_chr1_-_20126365_20126414	0.239525	FOXA2_FOXJ3	ENST00000294543.6|TMCO4|ENSG00000162542.9|transmembrane and coiled-coil domains 4 	ENST00000375122.2|TMCO4|ENSG00000162542.9|transmembrane and coiled-coil domains 4
hg19_v2_chr12_-_10251576_10251599	0.238877	FOXA2_FOXJ3	ENST00000315330.4|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr3_+_174577070_174577136	0.238596	FOXA2_FOXJ3	ENST00000454872.1|NAALADL2|ENSG00000177694.10|N-acetylated alpha-linked acidic dipeptidase-like 2
hg19_v2_chr2_-_179567206_179567260	0.236989	FOXA2_FOXJ3	ENST00000414766.1|TTN|ENSG00000155657.19|titin
hg19_v2_chr15_-_55657428_55657474	0.231673	FOXA2_FOXJ3	ENST00000568543.1|CCPG1|ENSG00000260916.1|cell cycle progression 1
hg19_v2_chr7_+_119913688_119913728	0.227918	FOXA2_FOXJ3	ENST00000331113.4|KCND2|ENSG00000184408.5|potassium voltage-gated channel, Shal-related subfamily, member 2
hg19_v2_chr19_-_58662139_58662182	0.226976	FOXA2_FOXJ3	ENST00000598312.1|ZNF329|ENSG00000181894.10|zinc finger protein 329
hg19_v2_chr11_-_34535332_34535352	0.226675	FOXA2_FOXJ3	ENST00000257832.2|ELF5|ENSG00000135374.5|E74-like factor 5 (ets domain transcription factor) 	ENST00000429939.2|ELF5|ENSG00000135374.5|E74-like factor 5 (ets domain transcription factor)
hg19_v2_chr20_+_48429233_48429257	0.226123	FOXA2_FOXJ3	ENST00000417961.1|SLC9A8|ENSG00000197818.7|solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8
hg19_v2_chr2_+_114195268_114195340	0.224008	FOXA2_FOXJ3	ENST00000259199.4|CBWD2|ENSG00000136682.10|COBW domain containing 2 	ENST00000416503.2|CBWD2|ENSG00000136682.10|COBW domain containing 2 	ENST00000433343.2|CBWD2|ENSG00000136682.10|COBW domain containing 2
hg19_v2_chr3_+_157828152_157828222	0.221844	FOXA2_FOXJ3	ENST00000476899.1|RSRC1|ENSG00000174891.8|arginine/serine-rich coiled-coil 1
hg19_v2_chr1_+_172389821_172389833	0.219706	FOXA2_FOXJ3	ENST00000367727.4|C1orf105|ENSG00000180999.6|chromosome 1 open reading frame 105
hg19_v2_chr11_-_26593779_26593795	0.219374	FOXA2_FOXJ3	ENST00000529533.1|MUC15|ENSG00000169550.8|mucin 15, cell surface associated
hg19_v2_chr19_+_782755_782833	0.218494	FOXA2_FOXJ3	ENST00000606242.1|AC006273.5|ENSG00000267530.2|AC006273.5	ENST00000586061.1|AC006273.5|ENSG00000267530.2|AC006273.5
hg19_v2_chr10_+_52724028_52724035	0.21657	FOXA2_FOXJ3	ENST00000561565.1|RP11-96B5.4|ENSG00000261368.1|RP11-96B5.4
hg19_v2_chr12_-_10251603_10251619	0.215924	FOXA2_FOXJ3	ENST00000457018.2|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr11_+_7110165_7110277	0.213883	FOXA2_FOXJ3	ENST00000306904.5|RBMXL2|ENSG00000170748.5|RNA binding motif protein, X-linked-like 2
hg19_v2_chr11_-_102651343_102651365	0.210699	FOXA2_FOXJ3	ENST00000279441.4|MMP10|ENSG00000166670.5|matrix metallopeptidase 10 (stromelysin 2) 	ENST00000539681.1|MMP10|ENSG00000166670.5|matrix metallopeptidase 10 (stromelysin 2)
hg19_v2_chr14_+_58894103_58894124	0.20731	FOXA2_FOXJ3	ENST00000354386.6|KIAA0586|ENSG00000100578.10|KIAA0586 	ENST00000556134.1|KIAA0586|ENSG00000100578.10|KIAA0586
hg19_v2_chr22_-_17302589_17302589	0.205385	FOXA2_FOXJ3	ENST00000331428.5|XKR3|ENSG00000172967.7|XK, Kell blood group complex subunit-related family, member 3
hg19_v2_chr13_-_41240717_41240735	0.205034	FOXA2_FOXJ3	ENST00000379561.5|FOXO1|ENSG00000150907.6|forkhead box O1
hg19_v2_chr6_-_168479839_168479904	0.203009	FOXA2_FOXJ3	ENST00000283309.6|FRMD1|ENSG00000153303.12|FERM domain containing 1
hg19_v2_chr11_-_121986923_121986923	0.20284	FOXA2_FOXJ3	ENST00000560104.1|BLID|ENSG00000259571.1|BH3-like motif containing, cell death inducer
hg19_v2_chr3_+_119316689_119316710	0.200375	FOXA2_FOXJ3	ENST00000273371.4|PLA1A|ENSG00000144837.4|phospholipase A1 member A
hg19_v2_chr4_-_123542224_123542224	0.199683	FOXA2_FOXJ3	ENST00000264497.3|IL21|ENSG00000138684.3|interleukin 21
hg19_v2_chr9_+_80850952_80851267	0.197154	FOXA2_FOXJ3	ENST00000424347.2|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000415759.2|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000376597.4|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000277082.5|CEP78|ENSG00000148019.8|centrosomal protein 78kDa 	ENST00000376598.2|CEP78|ENSG00000148019.8|centrosomal protein 78kDa
hg19_v2_chr19_-_5978144_5978159	0.196539	FOXA2_FOXJ3	ENST00000340578.6|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000541471.1|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000591736.1|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000587479.1|RANBP3|ENSG00000031823.10|RAN binding protein 3
hg19_v2_chr1_+_174844645_174844684	0.19451	FOXA2_FOXJ3	ENST00000486220.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr2_-_71454185_71454242	0.193326	FOXA2_FOXJ3	ENST00000244221.8|PAIP2B|ENSG00000124374.8|poly(A) binding protein interacting protein 2B
hg19_v2_chr11_+_134144139_134144139	0.192709	FOXA2_FOXJ3	ENST00000389887.5|GLB1L3|ENSG00000166105.11|galactosidase, beta 1-like 3
hg19_v2_chr19_+_52839515_52839572	0.192145	FOXA2_FOXJ3	ENST00000403906.3|ZNF610|ENSG00000167554.10|zinc finger protein 610 	ENST00000601151.1|ZNF610|ENSG00000167554.10|zinc finger protein 610
hg19_v2_chr6_-_131949200_131949299	0.191409	FOXA2_FOXJ3	ENST00000539158.1|MED23|ENSG00000112282.13|mediator complex subunit 23 	ENST00000368058.1|MED23|ENSG00000112282.13|mediator complex subunit 23
hg19_v2_chr19_-_5978090_5978129	0.1899	FOXA2_FOXJ3	ENST00000592621.1|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000034275.8|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000591092.1|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000591333.1|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000590623.1|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000439268.2|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000587159.1|RANBP3|ENSG00000031823.10|RAN binding protein 3
hg19_v2_chr17_-_19290483_19290553	0.189471	FOXA2_FOXJ3	ENST00000395592.2|MFAP4|ENSG00000166482.7|microfibrillar-associated protein 4 	ENST00000299610.4|MFAP4|ENSG00000166482.7|microfibrillar-associated protein 4
hg19_v2_chr10_+_124739964_124739994	0.185922	FOXA2_FOXJ3	ENST00000406217.2|PSTK|ENSG00000179988.9|phosphoseryl-tRNA kinase
hg19_v2_chr10_+_124739911_124739957	0.18592	FOXA2_FOXJ3	ENST00000405485.1|PSTK|ENSG00000179988.9|phosphoseryl-tRNA kinase
hg19_v2_chr17_-_3595181_3595296	0.185678	FOXA2_FOXJ3	ENST00000552050.1|P2RX5|ENSG00000083454.17|purinergic receptor P2X, ligand-gated ion channel, 5
hg19_v2_chr3_+_119316721_119316739	0.184647	FOXA2_FOXJ3	ENST00000488919.1|PLA1A|ENSG00000144837.4|phospholipase A1 member A 	ENST00000495992.1|PLA1A|ENSG00000144837.4|phospholipase A1 member A
hg19_v2_chr1_-_213188772_213188856	0.184556	FOXA2_FOXJ3	ENST00000544555.1|ANGEL2|ENSG00000174606.8|angel homolog 2 (Drosophila)
hg19_v2_chr15_+_84906338_84906338	0.183155	FOXA2_FOXJ3	ENST00000512109.1|GOLGA6L4|ENSG00000184206.7|golgin A6 family-like 4
hg19_v2_chr2_+_109204743_109204855	0.181251	FOXA2_FOXJ3	ENST00000332345.6|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr12_+_40787194_40787197	0.181103	FOXA2_FOXJ3	ENST00000425730.2|MUC19|ENSG00000205592.9|mucin 19, oligomeric 	ENST00000454784.4|MUC19|ENSG00000205592.9|mucin 19, oligomeric
hg19_v2_chr19_+_52839490_52839508	0.180743	FOXA2_FOXJ3	ENST00000321287.8|ZNF610|ENSG00000167554.10|zinc finger protein 610
hg19_v2_chr1_-_92371839_92371892	0.177274	FOXA2_FOXJ3	ENST00000370399.2|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr1_-_89736434_89736546	0.175905	FOXA2_FOXJ3	ENST00000370459.3|GBP5|ENSG00000154451.10|guanylate binding protein 5
hg19_v2_chr9_+_27109133_27109187	0.174396	FOXA2_FOXJ3	ENST00000519097.1|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial 	ENST00000380036.4|TEK|ENSG00000120156.16|TEK tyrosine kinase, endothelial
hg19_v2_chr11_-_26593649_26593670	0.173236	FOXA2_FOXJ3	ENST00000455601.2|MUC15|ENSG00000169550.8|mucin 15, cell surface associated
hg19_v2_chr22_-_39268308_39268319	0.173059	FOXA2_FOXJ3	ENST00000407418.3|CBX6|ENSG00000183741.7|chromobox homolog 6
hg19_v2_chr1_+_92545862_92545917	0.172666	FOXA2_FOXJ3	ENST00000370382.3|BTBD8|ENSG00000189195.5|BTB (POZ) domain containing 8 	ENST00000342818.3|BTBD8|ENSG00000189195.5|BTB (POZ) domain containing 8
hg19_v2_chr14_+_58894141_58894155	0.172655	FOXA2_FOXJ3	ENST00000423743.3|KIAA0586|ENSG00000100578.10|KIAA0586
hg19_v2_chr14_+_88851874_88852056	0.172293	FOXA2_FOXJ3	ENST00000393545.4|SPATA7|ENSG00000042317.12|spermatogenesis associated 7 	ENST00000356583.5|SPATA7|ENSG00000042317.12|spermatogenesis associated 7 	ENST00000555401.1|SPATA7|ENSG00000042317.12|spermatogenesis associated 7 	ENST00000553885.1|SPATA7|ENSG00000042317.12|spermatogenesis associated 7
hg19_v2_chr7_+_128312346_128312371	0.172213	FOXA2_FOXJ3	ENST00000480462.1|FAM71F2|ENSG00000205085.4|family with sequence similarity 71, member F2 	ENST00000378704.3|FAM71F2|ENSG00000205085.4|family with sequence similarity 71, member F2 	ENST00000477515.1|FAM71F2|ENSG00000205085.4|family with sequence similarity 71, member F2
hg19_v2_chr4_+_146403912_146403972	0.170444	FOXA2_FOXJ3	ENST00000507367.1|SMAD1|ENSG00000170365.5|SMAD family member 1 	ENST00000394092.2|SMAD1|ENSG00000170365.5|SMAD family member 1 	ENST00000515385.1|SMAD1|ENSG00000170365.5|SMAD family member 1
hg19_v2_chr2_-_55920952_55921045	0.165819	FOXA2_FOXJ3	ENST00000447944.2|PNPT1|ENSG00000138035.10|polyribonucleotide nucleotidyltransferase 1
hg19_v2_chr10_+_7745303_7745363	0.165516	FOXA2_FOXJ3	ENST00000429820.1|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2 	ENST00000379587.4|ITIH2|ENSG00000151655.13|inter-alpha-trypsin inhibitor heavy chain 2
hg19_v2_chr1_+_207669613_207669686	0.162961	FOXA2_FOXJ3	ENST00000367049.4|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group) 	ENST00000529814.1|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group)
hg19_v2_chr11_+_55029628_55029658	0.162745	FOXA2_FOXJ3	ENST00000417545.2|TRIM48|ENSG00000150244.8|tripartite motif containing 48
hg19_v2_chr13_+_75126978_75126988	0.161882	FOXA2_FOXJ3	ENST00000596240.1|LINC00347|ENSG00000236678.3|long intergenic non-protein coding RNA 347 	ENST00000451336.2|LINC00347|ENSG00000236678.3|long intergenic non-protein coding RNA 347
hg19_v2_chr1_+_196621002_196621021	0.161678	FOXA2_FOXJ3	ENST00000367429.4|CFH|ENSG00000000971.11|complement factor H 	ENST00000439155.2|CFH|ENSG00000000971.11|complement factor H
hg19_v2_chr12_+_48516357_48516436	0.160817	FOXA2_FOXJ3	ENST00000549022.1|PFKM|ENSG00000152556.11|phosphofructokinase, muscle 	ENST00000547587.1|PFKM|ENSG00000152556.11|phosphofructokinase, muscle 	ENST00000312352.7|PFKM|ENSG00000152556.11|phosphofructokinase, muscle
hg19_v2_chr1_+_163039143_163039159	0.160363	FOXA2_FOXJ3	ENST00000531057.1|RGS4|ENSG00000117152.9|regulator of G-protein signaling 4 	ENST00000527809.1|RGS4|ENSG00000117152.9|regulator of G-protein signaling 4 	ENST00000367908.4|RGS4|ENSG00000117152.9|regulator of G-protein signaling 4
hg19_v2_chr16_-_88772670_88772702	0.159994	FOXA2_FOXJ3	ENST00000562544.1|RNF166|ENSG00000158717.6|ring finger protein 166
hg19_v2_chr12_+_57998400_57998422	0.158565	FOXA2_FOXJ3	ENST00000548804.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000550596.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000551835.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila) 	ENST00000549583.1|DTX3|ENSG00000178498.11|deltex homolog 3 (Drosophila)
hg19_v2_chr20_+_48429356_48429458	0.157649	FOXA2_FOXJ3	ENST00000361573.2|SLC9A8|ENSG00000197818.7|solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 	ENST00000541138.1|SLC9A8|ENSG00000197818.7|solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 	ENST00000539601.1|SLC9A8|ENSG00000197818.7|solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8
hg19_v2_chr1_+_174670143_174670160	0.157565	FOXA2_FOXJ3	ENST00000367687.1|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like 	ENST00000347255.2|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr8_+_75512010_75512101	0.156397	FOXA2_FOXJ3	ENST00000518190.1|RP11-758M4.1|ENSG00000254349.1|Uncharacterized protein  	ENST00000523118.1|RP11-758M4.1|ENSG00000254349.1|Uncharacterized protein
hg19_v2_chr2_-_27886676_27886714	0.154703	FOXA2_FOXJ3	ENST00000337768.5|SUPT7L|ENSG00000119760.11|suppressor of Ty 7 (S. cerevisiae)-like
hg19_v2_chr19_+_3880581_3880692	0.154275	FOXA2_FOXJ3	ENST00000450849.2|ATCAY|ENSG00000167654.13|ataxia, cerebellar, Cayman type 	ENST00000301260.6|ATCAY|ENSG00000167654.13|ataxia, cerebellar, Cayman type 	ENST00000398448.3|ATCAY|ENSG00000167654.13|ataxia, cerebellar, Cayman type
hg19_v2_chr6_-_32160622_32160719	0.153347	FOXA2_FOXJ3	ENST00000487761.1|GPSM3|ENSG00000213654.5|G-protein signaling modulator 3 	ENST00000375040.3|GPSM3|ENSG00000213654.5|G-protein signaling modulator 3
hg19_v2_chr20_+_52105495_52105495	0.153156	FOXA2_FOXJ3	ENST00000439873.2|AL354993.1|ENSG00000227164.2|Cell growth-inhibiting protein 7; HCG1784586; Uncharacterized protein
hg19_v2_chr17_+_79953310_79953319	0.152663	FOXA2_FOXJ3	ENST00000582355.2|ASPSCR1|ENSG00000169696.11|alveolar soft part sarcoma chromosome region, candidate 1
hg19_v2_chr1_-_57431679_57431810	0.151253	FOXA2_FOXJ3	ENST00000371237.4|C8B|ENSG00000021852.8|complement component 8, beta polypeptide 	ENST00000535057.1|C8B|ENSG00000021852.8|complement component 8, beta polypeptide 	ENST00000543257.1|C8B|ENSG00000021852.8|complement component 8, beta polypeptide
hg19_v2_chr11_-_85397167_85397320	0.150293	FOXA2_FOXJ3	ENST00000316398.3|CCDC89|ENSG00000179071.3|coiled-coil domain containing 89
hg19_v2_chr3_-_150421728_150421746	0.150197	FOXA2_FOXJ3	ENST00000295910.6|FAM194A|ENSG00000163645.10|family with sequence similarity 194, member A 	ENST00000491361.1|FAM194A|ENSG00000163645.10|family with sequence similarity 194, member A
hg19_v2_chr8_+_100025476_100025548	0.149288	FOXA2_FOXJ3	ENST00000355155.1|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000357162.2|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000358544.2|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000395996.1|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast) 	ENST00000441350.2|VPS13B|ENSG00000132549.14|vacuolar protein sorting 13 homolog B (yeast)
hg19_v2_chr10_-_73848086_73848099	0.149067	FOXA2_FOXJ3	ENST00000536168.1|SPOCK2|ENSG00000107742.8|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2
hg19_v2_chrX_-_48693955_48694035	0.146011	FOXA2_FOXJ3	ENST00000218230.5|PCSK1N|ENSG00000102109.7|proprotein convertase subtilisin/kexin type 1 inhibitor
hg19_v2_chr12_+_99038919_99038954	0.145613	FOXA2_FOXJ3	ENST00000551964.1|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1
hg19_v2_chr5_-_19988339_19988358	0.144193	FOXA2_FOXJ3	ENST00000382275.1|CDH18|ENSG00000145526.7|cadherin 18, type 2
hg19_v2_chr9_+_21440440_21440440	0.143872	FOXA2_FOXJ3	ENST00000276927.1|IFNA1|ENSG00000197919.3|interferon, alpha 1
hg19_v2_chr12_-_21927736_21927768	0.143832	FOXA2_FOXJ3	ENST00000240662.2|KCNJ8|ENSG00000121361.3|potassium inwardly-rectifying channel, subfamily J, member 8
hg19_v2_chr1_-_114429997_114430077	0.143587	FOXA2_FOXJ3	ENST00000471267.1|BCL2L15|ENSG00000188761.7|BCL2-like 15 	ENST00000393320.3|BCL2L15|ENSG00000188761.7|BCL2-like 15
hg19_v2_chr17_-_49021974_49022074	0.142915	FOXA2_FOXJ3	ENST00000501718.2|RP11-700H6.1|ENSG00000247011.2|RP11-700H6.1
hg19_v2_chr13_-_103451307_103451380	0.140486	FOXA2_FOXJ3	ENST00000376004.4|KDELC1|ENSG00000134901.8|KDEL (Lys-Asp-Glu-Leu) containing 1
hg19_v2_chr5_+_159614374_159614397	0.139432	FOXA2_FOXJ3	ENST00000393980.4|FABP6|ENSG00000170231.11|fatty acid binding protein 6, ileal
hg19_v2_chr14_-_102605983_102606042	0.138801	FOXA2_FOXJ3	ENST00000334701.7|HSP90AA1|ENSG00000080824.14|heat shock protein 90kDa alpha (cytosolic), class A member 1
hg19_v2_chr19_+_18208603_18208614	0.138405	FOXA2_FOXJ3	ENST00000262811.6|MAST3|ENSG00000099308.6|microtubule associated serine/threonine kinase 3
hg19_v2_chr8_+_105352050_105352056	0.137903	FOXA2_FOXJ3	ENST00000297581.2|DCSTAMP|ENSG00000164935.2|dendrocyte expressed seven transmembrane protein
hg19_v2_chr16_+_81812863_81812877	0.137252	FOXA2_FOXJ3	ENST00000359376.3|PLCG2|ENSG00000197943.5|phospholipase C, gamma 2 (phosphatidylinositol-specific)
hg19_v2_chr19_-_50666431_50666455	0.137009	FOXA2_FOXJ3	ENST00000293405.3|IZUMO2|ENSG00000161652.8|IZUMO family member 2
hg19_v2_chr7_-_16840820_16841011	0.136956	FOXA2_FOXJ3	ENST00000450569.1|AGR2|ENSG00000106541.7|anterior gradient 2
hg19_v2_chr16_+_84801852_84801877	0.135084	FOXA2_FOXJ3	ENST00000569925.1|USP10|ENSG00000103194.11|ubiquitin specific peptidase 10 	ENST00000567526.1|USP10|ENSG00000103194.11|ubiquitin specific peptidase 10
hg19_v2_chr18_-_53303123_53303190	0.133664	FOXA2_FOXJ3	ENST00000569357.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000565124.1|TCF4|ENSG00000196628.9|transcription factor 4 	ENST00000398339.1|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chrX_+_77154935_77155012	0.133069	FOXA2_FOXJ3	ENST00000481445.1|COX7B|ENSG00000131174.4|cytochrome c oxidase subunit VIIb
hg19_v2_chr15_-_54051831_54051904	0.132076	FOXA2_FOXJ3	ENST00000557913.1|WDR72|ENSG00000166415.10|WD repeat domain 72 	ENST00000360509.5|WDR72|ENSG00000166415.10|WD repeat domain 72
hg19_v2_chr10_+_70847852_70847874	0.131895	FOXA2_FOXJ3	ENST00000242465.3|SRGN|ENSG00000122862.4|serglycin
hg19_v2_chr4_-_138453559_138453572	0.130751	FOXA2_FOXJ3	ENST00000511115.1|PCDH18|ENSG00000189184.7|protocadherin 18
hg19_v2_chr3_+_98072698_98072698	0.130585	FOXA2_FOXJ3	ENST00000354924.2|OR5K4|ENSG00000196098.2|olfactory receptor, family 5, subfamily K, member 4
hg19_v2_chr1_-_39339777_39339777	0.130385	FOXA2_FOXJ3	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chr4_-_140223614_140223668	0.130166	FOXA2_FOXJ3	ENST00000394223.1|NDUFC1|ENSG00000109390.7|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa
hg19_v2_chr10_-_69597810_69597827	0.129971	FOXA2_FOXJ3	ENST00000483798.2|DNAJC12|ENSG00000108176.10|DnaJ (Hsp40) homolog, subfamily C, member 12
hg19_v2_chr8_-_95449155_95449188	0.129744	FOXA2_FOXJ3	ENST00000481490.2|FSBP|ENSG00000265817.1|fibrinogen silencer binding protein
hg19_v2_chr22_-_43036607_43036607	0.129385	FOXA2_FOXJ3	ENST00000505920.1|ATP5L2|ENSG00000249222.1|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G2
hg19_v2_chr6_+_122793058_122793087	0.128039	FOXA2_FOXJ3	ENST00000392491.2|PKIB|ENSG00000135549.10|protein kinase (cAMP-dependent, catalytic) inhibitor beta
hg19_v2_chr16_-_279405_279462	0.127889	FOXA2_FOXJ3	ENST00000430864.1|LUC7L|ENSG00000007392.12|LUC7-like (S. cerevisiae) 	ENST00000293872.8|LUC7L|ENSG00000007392.12|LUC7-like (S. cerevisiae) 	ENST00000337351.4|LUC7L|ENSG00000007392.12|LUC7-like (S. cerevisiae) 	ENST00000397783.1|LUC7L|ENSG00000007392.12|LUC7-like (S. cerevisiae)
hg19_v2_chr2_+_166095898_166095940	0.127217	FOXA2_FOXJ3	ENST00000424833.1|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000375437.2|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000357398.3|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit
hg19_v2_chr3_-_169587621_169587728	0.126953	FOXA2_FOXJ3	ENST00000523069.1|LRRC31|ENSG00000114248.5|leucine rich repeat containing 31 	ENST00000316428.5|LRRC31|ENSG00000114248.5|leucine rich repeat containing 31 	ENST00000264676.5|LRRC31|ENSG00000114248.5|leucine rich repeat containing 31
hg19_v2_chr19_-_50666404_50666424	0.126741	FOXA2_FOXJ3	ENST00000600293.1|IZUMO2|ENSG00000161652.8|IZUMO family member 2
hg19_v2_chr6_-_109330702_109330763	0.12618	FOXA2_FOXJ3	ENST00000356644.7|SESN1|ENSG00000080546.9|sestrin 1
hg19_v2_chr14_+_58894706_58894720	0.126046	FOXA2_FOXJ3	ENST00000261244.5|KIAA0586|ENSG00000100578.10|KIAA0586
hg19_v2_chr2_+_179184955_179185003	0.126013	FOXA2_FOXJ3	ENST00000315022.2|OSBPL6|ENSG00000079156.12|oxysterol binding protein-like 6
hg19_v2_chr5_+_79703823_79703845	0.124036	FOXA2_FOXJ3	ENST00000338008.5|ZFYVE16|ENSG00000039319.12|zinc finger, FYVE domain containing 16 	ENST00000510158.1|ZFYVE16|ENSG00000039319.12|zinc finger, FYVE domain containing 16 	ENST00000505560.1|ZFYVE16|ENSG00000039319.12|zinc finger, FYVE domain containing 16
hg19_v2_chr16_+_6069072_6069132	0.122894	FOXA2_FOXJ3	ENST00000547605.1|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000550418.1|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000553186.1|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1
hg19_v2_chr6_-_29013017_29013017	0.122763	FOXA2_FOXJ3	ENST00000377175.1|OR2W1|ENSG00000204704.2|olfactory receptor, family 2, subfamily W, member 1
hg19_v2_chr12_+_120740119_120740124	0.121868	FOXA2_FOXJ3	ENST00000536460.1|SIRT4|ENSG00000089163.4|sirtuin 4 	ENST00000202967.4|SIRT4|ENSG00000089163.4|sirtuin 4
hg19_v2_chr20_-_44993012_44993085	0.121015	FOXA2_FOXJ3	ENST00000372229.1|SLC35C2|ENSG00000080189.10|solute carrier family 35 (GDP-fucose transporter), member C2 	ENST00000372230.5|SLC35C2|ENSG00000080189.10|solute carrier family 35 (GDP-fucose transporter), member C2 	ENST00000543605.1|SLC35C2|ENSG00000080189.10|solute carrier family 35 (GDP-fucose transporter), member C2 	ENST00000243896.2|SLC35C2|ENSG00000080189.10|solute carrier family 35 (GDP-fucose transporter), member C2 	ENST00000317734.8|SLC35C2|ENSG00000080189.10|solute carrier family 35 (GDP-fucose transporter), member C2
hg19_v2_chr12_-_57472522_57472556	0.120862	FOXA2_FOXJ3	ENST00000379391.3|TMEM194A|ENSG00000166881.5|transmembrane protein 194A 	ENST00000300128.4|TMEM194A|ENSG00000166881.5|transmembrane protein 194A
hg19_v2_chr1_+_224370873_224370968	0.120841	FOXA2_FOXJ3	ENST00000323699.4|DEGS1|ENSG00000143753.8|delta(4)-desaturase, sphingolipid 1 	ENST00000391877.3|DEGS1|ENSG00000143753.8|delta(4)-desaturase, sphingolipid 1
hg19_v2_chr9_+_120466650_120466659	0.118906	FOXA2_FOXJ3	ENST00000355622.6|TLR4|ENSG00000136869.13|toll-like receptor 4
hg19_v2_chr16_+_29467780_29467780	0.117887	FOXA2_FOXJ3	ENST00000395400.3|SULT1A4|ENSG00000213648.6|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4
hg19_v2_chr5_+_161275320_161275450	0.117614	FOXA2_FOXJ3	ENST00000437025.2|GABRA1|ENSG00000022355.10|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v2_chr20_+_56964169_56964182	0.117008	FOXA2_FOXJ3	ENST00000475243.1|VAPB|ENSG00000124164.11|VAMP (vesicle-associated membrane protein)-associated protein B and C
hg19_v2_chr18_-_53069419_53069471	0.115694	FOXA2_FOXJ3	ENST00000570177.2|TCF4|ENSG00000196628.9|transcription factor 4
hg19_v2_chr6_-_52109335_52109335	0.115309	FOXA2_FOXJ3	ENST00000336123.4|IL17F|ENSG00000112116.9|interleukin 17F
hg19_v2_chr1_+_87797351_87797441	0.114516	FOXA2_FOXJ3	ENST00000370542.1|LMO4|ENSG00000143013.8|LIM domain only 4
hg19_v2_chr13_-_36920420_36920574	0.114286	FOXA2_FOXJ3	ENST00000438666.2|SPG20|ENSG00000133104.8|spastic paraplegia 20 (Troyer syndrome)
hg19_v2_chr2_+_149402553_149402568	0.114005	FOXA2_FOXJ3	ENST00000258484.6|EPC2|ENSG00000135999.7|enhancer of polycomb homolog 2 (Drosophila) 	ENST00000409654.1|EPC2|ENSG00000135999.7|enhancer of polycomb homolog 2 (Drosophila)
hg19_v2_chr1_+_43855560_43855640	0.112905	FOXA2_FOXJ3	ENST00000562955.1|SZT2|ENSG00000198198.9|seizure threshold 2 homolog (mouse)
hg19_v2_chr15_-_102192567_102192597	0.112819	FOXA2_FOXJ3	ENST00000333202.3|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000428002.2|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000559107.1|TM2D3|ENSG00000184277.8|TM2 domain containing 3 	ENST00000347970.3|TM2D3|ENSG00000184277.8|TM2 domain containing 3
hg19_v2_chr16_+_30207122_30207122	0.112799	FOXA2_FOXJ3	ENST00000395137.2|SULT1A3|ENSG00000261052.1|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3
hg19_v2_chr7_+_35756186_35756202	0.112044	FOXA2_FOXJ3	ENST00000430518.1|AC018647.3|ENSG00000227544.4|AC018647.3
hg19_v2_chr2_+_191513959_191514047	0.11174	FOXA2_FOXJ3	ENST00000337386.5|NAB1|ENSG00000138386.12|NGFI-A binding protein 1 (EGR1 binding protein 1) 	ENST00000357215.5|NAB1|ENSG00000138386.12|NGFI-A binding protein 1 (EGR1 binding protein 1)
hg19_v2_chr4_-_140005443_140005650	0.11081	FOXA2_FOXJ3	ENST00000510408.1|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor) 	ENST00000420916.2|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor) 	ENST00000358635.3|ELF2|ENSG00000109381.15|E74-like factor 2 (ets domain transcription factor)
hg19_v2_chr1_+_220960033_220960101	0.109437	FOXA2_FOXJ3	ENST00000366910.5|MARC1|ENSG00000186205.8|mitochondrial amidoxime reducing component 1
hg19_v2_chr12_+_54892550_54892591	0.107341	FOXA2_FOXJ3	ENST00000545638.2|NCKAP1L|ENSG00000123338.8|NCK-associated protein 1-like
hg19_v2_chr17_-_29641104_29641130	0.10711	FOXA2_FOXJ3	ENST00000577894.1|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B 	ENST00000330927.4|EVI2B|ENSG00000185862.5|ecotropic viral integration site 2B
hg19_v2_chr2_+_109204909_109204928	0.107026	FOXA2_FOXJ3	ENST00000393310.1|LIMS1|ENSG00000169756.12|LIM and senescent cell antigen-like domains 1
hg19_v2_chr1_+_174846570_174846584	0.106674	FOXA2_FOXJ3	ENST00000392064.2|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr2_+_27665232_27665286	0.106444	FOXA2_FOXJ3	ENST00000543753.1|KRTCAP3|ENSG00000157992.8|keratinocyte associated protein 3 	ENST00000288873.3|KRTCAP3|ENSG00000157992.8|keratinocyte associated protein 3
hg19_v2_chr1_+_161123536_161123588	0.106282	FOXA2_FOXJ3	ENST00000368003.5|UFC1|ENSG00000143222.7|ubiquitin-fold modifier conjugating enzyme 1
hg19_v2_chr1_+_174669653_174669663	0.106279	FOXA2_FOXJ3	ENST00000325589.5|RABGAP1L|ENSG00000152061.17|RAB GTPase activating protein 1-like
hg19_v2_chr2_+_61372226_61372273	0.105674	FOXA2_FOXJ3	ENST00000426997.1|C2orf74|ENSG00000237651.2|chromosome 2 open reading frame 74
hg19_v2_chr16_-_28374829_28374829	0.104089	FOXA2_FOXJ3	ENST00000532254.1|NPIPB6|ENSG00000198156.6|nuclear pore complex interacting protein family, member B6
hg19_v2_chr1_+_117297007_117297099	0.103402	FOXA2_FOXJ3	ENST00000369478.3|CD2|ENSG00000116824.4|CD2 molecule 	ENST00000369477.1|CD2|ENSG00000116824.4|CD2 molecule
hg19_v2_chr12_+_99038998_99039078	0.102848	FOXA2_FOXJ3	ENST00000359972.2|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000357310.1|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000339433.3|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000333991.1|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1
hg19_v2_chr1_-_241799232_241799232	0.102466	FOXA2_FOXJ3	ENST00000366553.1|CHML|ENSG00000203668.1|choroideremia-like (Rab escort protein 2)
hg19_v2_chr8_+_27632047_27632080	0.100428	FOXA2_FOXJ3	ENST00000397418.2|ESCO2|ENSG00000171320.10|establishment of sister chromatid cohesion N-acetyltransferase 2
hg19_v2_chr21_+_29911640_29911665	0.100186	FOXA2_FOXJ3	ENST00000412526.1|LINC00161|ENSG00000226935.2|long intergenic non-protein coding RNA 161 	ENST00000455939.1|LINC00161|ENSG00000226935.2|long intergenic non-protein coding RNA 161
hg19_v2_chr9_+_70856397_70856397	0.0999246	FOXA2_FOXJ3	ENST00000360171.6|CBWD3|ENSG00000196873.11|COBW domain containing 3
hg19_v2_chr1_+_207669573_207669606	0.0989915	FOXA2_FOXJ3	ENST00000400960.2|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group) 	ENST00000534202.1|CR1|ENSG00000203710.6|complement component (3b/4b) receptor 1 (Knops blood group)
hg19_v2_chr3_-_189838670_189838718	0.0989106	FOXA2_FOXJ3	ENST00000319332.5|LEPREL1|ENSG00000090530.5|leprecan-like 1
hg19_v2_chr11_-_110561721_110561721	0.0982774	FOXA2_FOXJ3	ENST00000357139.3|ARHGAP20|ENSG00000137727.8|Rho GTPase activating protein 20
hg19_v2_chr15_-_31283798_31283851	0.0980967	FOXA2_FOXJ3	ENST00000435680.1|MTMR10|ENSG00000166912.12|myotubularin related protein 10 	ENST00000425768.1|MTMR10|ENSG00000166912.12|myotubularin related protein 10
hg19_v2_chr7_+_6617039_6617136	0.0980867	FOXA2_FOXJ3	ENST00000405731.3|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396713.2|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396707.2|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000335965.6|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396709.1|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000483589.1|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4 	ENST00000396706.2|ZDHHC4|ENSG00000136247.10|zinc finger, DHHC-type containing 4
hg19_v2_chrX_-_47863348_47863412	0.0970596	FOXA2_FOXJ3	ENST00000376943.3|ZNF182|ENSG00000147118.6|zinc finger protein 182 	ENST00000396965.1|ZNF182|ENSG00000147118.6|zinc finger protein 182 	ENST00000305127.6|ZNF182|ENSG00000147118.6|zinc finger protein 182
hg19_v2_chr15_+_64680003_64680063	0.0968473	FOXA2_FOXJ3	ENST00000261884.3|TRIP4|ENSG00000103671.5|thyroid hormone receptor interactor 4
hg19_v2_chr21_-_43346790_43346823	0.0967156	FOXA2_FOXJ3	ENST00000329623.7|C2CD2|ENSG00000157617.12|C2 calcium-dependent domain containing 2
hg19_v2_chr1_-_24194771_24194851	0.0958836	FOXA2_FOXJ3	ENST00000374479.3|FUCA1|ENSG00000179163.11|fucosidase, alpha-L- 1, tissue
hg19_v2_chr4_-_170679024_170679104	0.0948467	FOXA2_FOXJ3	ENST00000393381.2|C4orf27|ENSG00000056050.6|chromosome 4 open reading frame 27
hg19_v2_chr2_+_27665289_27665331	0.0945539	FOXA2_FOXJ3	ENST00000407293.1|KRTCAP3|ENSG00000157992.8|keratinocyte associated protein 3
hg19_v2_chr4_-_122854612_122854612	0.094087	FOXA2_FOXJ3	ENST00000264811.5|TRPC3|ENSG00000138741.6|transient receptor potential cation channel, subfamily C, member 3
hg19_v2_chr12_-_10251539_10251560	0.0937785	FOXA2_FOXJ3	ENST00000420265.2|CLEC1A|ENSG00000150048.6|C-type lectin domain family 1, member A
hg19_v2_chr3_-_48956818_48956818	0.0915985	FOXA2_FOXJ3	ENST00000408959.2|ARIH2OS|ENSG00000221883.2|ariadne homolog 2 opposite strand
hg19_v2_chr13_+_52598827_52598827	0.0914641	FOXA2_FOXJ3	ENST00000521776.2|UTP14C|ENSG00000253797.2|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)
hg19_v2_chr11_-_5345582_5345582	0.0912028	FOXA2_FOXJ3	ENST00000328813.2|OR51B2|ENSG00000184881.2|olfactory receptor, family 51, subfamily B, member 2
hg19_v2_chr4_+_79567314_79567348	0.0907602	FOXA2_FOXJ3	ENST00000503539.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094 	ENST00000504675.1|RP11-792D21.2|ENSG00000251442.1|long intergenic non-protein coding RNA 1094
hg19_v2_chrX_+_15767971_15768093	0.090237	FOXA2_FOXJ3	ENST00000479740.1|CA5B|ENSG00000169239.8|carbonic anhydrase VB, mitochondrial 	ENST00000454127.2|CA5B|ENSG00000169239.8|carbonic anhydrase VB, mitochondrial
hg19_v2_chr9_-_21368075_21368075	0.0892575	FOXA2_FOXJ3	ENST00000449498.1|IFNA13|ENSG00000233816.2|interferon, alpha 13
hg19_v2_chr14_+_57671888_57671888	0.0892462	FOXA2_FOXJ3	ENST00000391612.1|AL391152.1|ENSG00000212928.1|AL391152.1
hg19_v2_chr16_+_5121814_5121855	0.0891659	FOXA2_FOXJ3	ENST00000262374.5|ALG1|ENSG00000033011.7|ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 	ENST00000586840.1|ALG1|ENSG00000033011.7|ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase
hg19_v2_chr9_+_127962795_127962834	0.0891514	FOXA2_FOXJ3	ENST00000394125.4|RABEPK|ENSG00000136933.12|Rab9 effector protein with kelch motifs 	ENST00000259460.8|RABEPK|ENSG00000136933.12|Rab9 effector protein with kelch motifs 	ENST00000373544.1|RABEPK|ENSG00000136933.12|Rab9 effector protein with kelch motifs
hg19_v2_chr2_-_87248975_87248975	0.0885718	FOXA2_FOXJ3	ENST00000409310.2|PLGLB1|ENSG00000183281.10|plasminogen-like B1 	ENST00000355705.3|PLGLB1|ENSG00000183281.10|plasminogen-like B1
hg19_v2_chrX_+_134975858_134975885	0.0884657	FOXA2_FOXJ3	ENST00000537770.1|SAGE1|ENSG00000181433.5|sarcoma antigen 1
hg19_v2_chr17_-_26662440_26662463	0.0884607	FOXA2_FOXJ3	ENST00000578122.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas)
hg19_v2_chr1_-_177939348_177939395	0.0880831	FOXA2_FOXJ3	ENST00000464631.2|SEC16B|ENSG00000120341.14|SEC16 homolog B (S. cerevisiae)
hg19_v2_chr8_-_38008783_38008783	0.0877751	FOXA2_FOXJ3	ENST00000276449.4|STAR|ENSG00000147465.7|steroidogenic acute regulatory protein
hg19_v2_chr6_-_114194483_114194525	0.0874158	FOXA2_FOXJ3	ENST00000434296.2|RP1-249H1.4|ENSG00000227502.2|RP1-249H1.4
hg19_v2_chr3_+_157827841_157827916	0.0865228	FOXA2_FOXJ3	ENST00000295930.3|RSRC1|ENSG00000174891.8|arginine/serine-rich coiled-coil 1 	ENST00000471994.1|RSRC1|ENSG00000174891.8|arginine/serine-rich coiled-coil 1 	ENST00000464171.1|RSRC1|ENSG00000174891.8|arginine/serine-rich coiled-coil 1 	ENST00000312179.6|RSRC1|ENSG00000174891.8|arginine/serine-rich coiled-coil 1 	ENST00000475278.2|RSRC1|ENSG00000174891.8|arginine/serine-rich coiled-coil 1
hg19_v2_chr14_-_22938665_22938690	0.0854227	FOXA2_FOXJ3	ENST00000535880.2|TRDV3|ENSG00000256590.2|T cell receptor delta variable 3
hg19_v2_chr5_-_36301984_36302010	0.0851776	FOXA2_FOXJ3	ENST00000502994.1|RANBP3L|ENSG00000164188.4|RAN binding protein 3-like 	ENST00000515759.1|RANBP3L|ENSG00000164188.4|RAN binding protein 3-like 	ENST00000296604.3|RANBP3L|ENSG00000164188.4|RAN binding protein 3-like
hg19_v2_chr16_-_25122785_25122876	0.0849321	FOXA2_FOXJ3	ENST00000563962.1|RP11-449H11.1|ENSG00000260448.1|RP11-449H11.1	ENST00000569920.1|RP11-449H11.1|ENSG00000260448.1|RP11-449H11.1
hg19_v2_chr3_+_119298429_119298454	0.0844676	FOXA2_FOXJ3	ENST00000478927.1|ADPRH|ENSG00000144843.7|ADP-ribosylarginine hydrolase
hg19_v2_chr2_+_169757750_169757835	0.0843446	FOXA2_FOXJ3	ENST00000375363.3|G6PC2|ENSG00000152254.6|glucose-6-phosphatase, catalytic, 2 	ENST00000429379.2|G6PC2|ENSG00000152254.6|glucose-6-phosphatase, catalytic, 2 	ENST00000421979.1|G6PC2|ENSG00000152254.6|glucose-6-phosphatase, catalytic, 2
hg19_v2_chr5_+_140625147_140625147	0.0830286	FOXA2_FOXJ3	ENST00000231173.3|PCDHB15|ENSG00000113248.3|protocadherin beta 15
hg19_v2_chr3_-_125655882_125655882	0.08207	FOXA2_FOXJ3	ENST00000340333.3|ALG1L|ENSG00000189366.5|ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like
hg19_v2_chr16_-_30621663_30621718	0.0820402	FOXA2_FOXJ3	ENST00000287461.3|ZNF689|ENSG00000156853.7|zinc finger protein 689
hg19_v2_chr17_-_6915646_6915673	0.082023	FOXA2_FOXJ3	ENST00000574377.1|AC027763.2|ENSG00000215067.5|Uncharacterized protein  	ENST00000399541.2|AC027763.2|ENSG00000215067.5|Uncharacterized protein  	ENST00000399540.2|AC027763.2|ENSG00000215067.5|Uncharacterized protein  	ENST00000575727.1|AC027763.2|ENSG00000215067.5|Uncharacterized protein  	ENST00000573939.1|AC027763.2|ENSG00000215067.5|Uncharacterized protein
hg19_v2_chr16_+_31128978_31129002	0.0820124	FOXA2_FOXJ3	ENST00000448516.2|KAT8|ENSG00000103510.15|K(lysine) acetyltransferase 8 	ENST00000219797.4|KAT8|ENSG00000103510.15|K(lysine) acetyltransferase 8
hg19_v2_chr13_-_79980315_79980403	0.0817979	FOXA2_FOXJ3	ENST00000438737.2|RBM26|ENSG00000139746.11|RNA binding motif protein 26
hg19_v2_chr5_-_98262240_98262240	0.081435	FOXA2_FOXJ3	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chrX_+_134975753_134975785	0.0809607	FOXA2_FOXJ3	ENST00000535938.1|SAGE1|ENSG00000181433.5|sarcoma antigen 1
hg19_v2_chr2_-_32490859_32490923	0.0807462	FOXA2_FOXJ3	ENST00000404025.2|NLRC4|ENSG00000091106.14|NLR family, CARD domain containing 4
hg19_v2_chr3_+_108541545_108541569	0.080565	FOXA2_FOXJ3	ENST00000295756.6|TRAT1|ENSG00000163519.9|T cell receptor associated transmembrane adaptor 1
hg19_v2_chrX_-_122756660_122756696	0.0803089	FOXA2_FOXJ3	ENST00000441692.1|THOC2|ENSG00000125676.15|THO complex 2
hg19_v2_chr13_-_53024725_53024809	0.080113	FOXA2_FOXJ3	ENST00000378060.4|VPS36|ENSG00000136100.8|vacuolar protein sorting 36 homolog (S. cerevisiae)
hg19_v2_chr16_+_56969284_56969314	0.0799507	FOXA2_FOXJ3	ENST00000568358.1|HERPUD1|ENSG00000051108.10|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
hg19_v2_chr3_+_108541608_108541624	0.0797899	FOXA2_FOXJ3	ENST00000426646.1|TRAT1|ENSG00000163519.9|T cell receptor associated transmembrane adaptor 1
hg19_v2_chr5_-_10308125_10308142	0.0796437	FOXA2_FOXJ3	ENST00000296658.3|CMBL|ENSG00000164237.4|carboxymethylenebutenolidase homolog (Pseudomonas)
hg19_v2_chr19_+_18111927_18111988	0.0790497	FOXA2_FOXJ3	ENST00000379656.3|ARRDC2|ENSG00000105643.5|arrestin domain containing 2
hg19_v2_chr5_+_101569696_101569696	0.0788872	FOXA2_FOXJ3	ENST00000597120.1|AC008948.1|ENSG00000268424.1|AC008948.1
hg19_v2_chr9_-_37465396_37465454	0.0788231	FOXA2_FOXJ3	ENST00000307750.4|ZBTB5|ENSG00000168795.4|zinc finger and BTB domain containing 5
hg19_v2_chr9_+_127962856_127962884	0.0787806	FOXA2_FOXJ3	ENST00000373538.3|RABEPK|ENSG00000136933.12|Rab9 effector protein with kelch motifs 	ENST00000416065.1|RABEPK|ENSG00000136933.12|Rab9 effector protein with kelch motifs
hg19_v2_chr14_+_102276132_102276178	0.0783331	FOXA2_FOXJ3	ENST00000350249.3|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000557621.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma 	ENST00000556946.1|PPP2R5C|ENSG00000078304.15|protein phosphatase 2, regulatory subunit B', gamma
hg19_v2_chr9_-_136933615_136933682	0.0769339	FOXA2_FOXJ3	ENST00000371834.2|BRD3|ENSG00000169925.12|bromodomain containing 3
hg19_v2_chr20_-_25677465_25677497	0.076856	FOXA2_FOXJ3	ENST00000252979.5|ZNF337|ENSG00000130684.9|zinc finger protein 337
hg19_v2_chr15_-_83224682_83224682	0.0766493	FOXA2_FOXJ3	ENST00000562833.1|RP11-152F13.10|ENSG00000260836.1|RP11-152F13.10
hg19_v2_chr10_-_69597828_69597854	0.0764382	FOXA2_FOXJ3	ENST00000339758.7|DNAJC12|ENSG00000108176.10|DnaJ (Hsp40) homolog, subfamily C, member 12
hg19_v2_chr16_-_30265831_30265831	0.0762142	FOXA2_FOXJ3	ENST00000568053.1|RP11-347C12.1|ENSG00000198064.9|Putative NPIP-like protein LOC613037
hg19_v2_chr19_+_36486078_36486123	0.0760737	FOXA2_FOXJ3	ENST00000378887.2|SDHAF1|ENSG00000205138.2|succinate dehydrogenase complex assembly factor 1
hg19_v2_chr6_-_13621126_13621126	0.0757998	FOXA2_FOXJ3	ENST00000600057.1|AL441883.1|ENSG00000268059.1|Uncharacterized protein
hg19_v2_chr3_+_142315225_142315290	0.0754159	FOXA2_FOXJ3	ENST00000457734.2|PLS1|ENSG00000120756.8|plastin 1 	ENST00000483373.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000475296.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000495744.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000476044.1|PLS1|ENSG00000120756.8|plastin 1 	ENST00000461644.1|PLS1|ENSG00000120756.8|plastin 1
hg19_v2_chr6_-_131949305_131949389	0.0753775	FOXA2_FOXJ3	ENST00000368053.4|MED23|ENSG00000112282.13|mediator complex subunit 23 	ENST00000354577.4|MED23|ENSG00000112282.13|mediator complex subunit 23 	ENST00000403834.3|MED23|ENSG00000112282.13|mediator complex subunit 23 	ENST00000540546.1|MED23|ENSG00000112282.13|mediator complex subunit 23 	ENST00000368068.3|MED23|ENSG00000112282.13|mediator complex subunit 23 	ENST00000368060.3|MED23|ENSG00000112282.13|mediator complex subunit 23
hg19_v2_chr19_-_15087839_15087849	0.0744559	FOXA2_FOXJ3	ENST00000600144.1|SLC1A6|ENSG00000105143.8|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6
hg19_v2_chr5_-_55529115_55529186	0.0719155	FOXA2_FOXJ3	ENST00000513241.2|ANKRD55|ENSG00000164512.13|ankyrin repeat domain 55 	ENST00000341048.4|ANKRD55|ENSG00000164512.13|ankyrin repeat domain 55
hg19_v2_chr7_-_115670792_115670798	0.0718874	FOXA2_FOXJ3	ENST00000265440.7|TFEC|ENSG00000105967.11|transcription factor EC 	ENST00000393485.1|TFEC|ENSG00000105967.11|transcription factor EC
hg19_v2_chr19_+_12721725_12721758	0.0715668	FOXA2_FOXJ3	ENST00000446165.1|ZNF791|ENSG00000173875.9|zinc finger protein 791 	ENST00000343325.4|ZNF791|ENSG00000173875.9|zinc finger protein 791 	ENST00000458122.3|ZNF791|ENSG00000173875.9|zinc finger protein 791
hg19_v2_chr5_-_146833222_146833261	0.071269	FOXA2_FOXJ3	ENST00000534907.1|DPYSL3|ENSG00000113657.8|dihydropyrimidinase-like 3
hg19_v2_chrX_+_26156460_26156460	0.071123	FOXA2_FOXJ3	ENST00000325250.1|MAGEB18|ENSG00000176774.5|melanoma antigen family B, 18
hg19_v2_chr1_-_100643765_100643829	0.0711084	FOXA2_FOXJ3	ENST00000370137.1|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39 	ENST00000370138.1|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39 	ENST00000342895.3|LRRC39|ENSG00000122477.8|leucine rich repeat containing 39
hg19_v2_chr20_+_48552908_48552949	0.0704156	FOXA2_FOXJ3	ENST00000244061.2|RNF114|ENSG00000124226.7|ring finger protein 114
hg19_v2_chr12_-_75905374_75905420	0.0700527	FOXA2_FOXJ3	ENST00000438169.2|KRR1|ENSG00000111615.8|KRR1, small subunit (SSU) processome component, homolog (yeast) 	ENST00000229214.4|KRR1|ENSG00000111615.8|KRR1, small subunit (SSU) processome component, homolog (yeast)
hg19_v2_chr10_-_129691195_129691212	0.0689371	FOXA2_FOXJ3	ENST00000368671.3|CLRN3|ENSG00000180745.4|clarin 3
hg19_v2_chr2_-_172750733_172750762	0.0685563	FOXA2_FOXJ3	ENST00000392592.4|SLC25A12|ENSG00000115840.9|solute carrier family 25 (aspartate/glutamate carrier), member 12 	ENST00000422440.2|SLC25A12|ENSG00000115840.9|solute carrier family 25 (aspartate/glutamate carrier), member 12
hg19_v2_chr13_+_73629107_73629148	0.0683084	FOXA2_FOXJ3	ENST00000539231.1|KLF5|ENSG00000102554.9|Kruppel-like factor 5 (intestinal)
hg19_v2_chr11_-_47447767_47447817	0.0682801	FOXA2_FOXJ3	ENST00000530651.1|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3 	ENST00000524447.2|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3 	ENST00000531051.2|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3 	ENST00000526993.1|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3 	ENST00000602866.1|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3
hg19_v2_chr7_-_115670804_115670867	0.0663905	FOXA2_FOXJ3	ENST00000320239.7|TFEC|ENSG00000105967.11|transcription factor EC
hg19_v2_chr14_+_97263641_97263764	0.0662574	FOXA2_FOXJ3	ENST00000216639.3|VRK1|ENSG00000100749.3|vaccinia related kinase 1
hg19_v2_chr1_+_43855545_43855557	0.0657883	FOXA2_FOXJ3	ENST00000372450.4|SZT2|ENSG00000198198.9|seizure threshold 2 homolog (mouse) 	ENST00000310739.4|SZT2|ENSG00000198198.9|seizure threshold 2 homolog (mouse)
hg19_v2_chrX_+_10124977_10125036	0.0655632	FOXA2_FOXJ3	ENST00000380833.4|CLCN4|ENSG00000073464.7|chloride channel, voltage-sensitive 4
hg19_v2_chr10_-_32217717_32217781	0.0653881	FOXA2_FOXJ3	ENST00000396144.4|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12 	ENST00000375245.4|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12 	ENST00000344936.2|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12 	ENST00000375250.5|ARHGAP12|ENSG00000165322.13|Rho GTPase activating protein 12
hg19_v2_chr17_+_16284604_16284661	0.0641434	FOXA2_FOXJ3	ENST00000395839.1|UBB|ENSG00000170315.9|ubiquitin B 	ENST00000395837.1|UBB|ENSG00000170315.9|ubiquitin B
hg19_v2_chr12_-_58240470_58240522	0.0631236	FOXA2_FOXJ3	ENST00000548823.1|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2 	ENST00000398073.2|CTDSP2|ENSG00000175215.5|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
hg19_v2_chr4_+_86749045_86749070	0.0627534	FOXA2_FOXJ3	ENST00000514229.1|ARHGAP24|ENSG00000138639.13|Rho GTPase activating protein 24
hg19_v2_chr11_-_118095718_118095753	0.0623944	FOXA2_FOXJ3	ENST00000526620.1|AMICA1|ENSG00000160593.13|adhesion molecule, interacts with CXADR antigen 1
hg19_v2_chr9_+_127962841_127962855	0.0621325	FOXA2_FOXJ3	ENST00000394124.4|RABEPK|ENSG00000136933.12|Rab9 effector protein with kelch motifs
hg19_v2_chr5_+_141346385_141346437	0.0619317	FOXA2_FOXJ3	ENST00000513019.1|RNF14|ENSG00000013561.13|ring finger protein 14 	ENST00000356143.1|RNF14|ENSG00000013561.13|ring finger protein 14
hg19_v2_chr14_+_23938891_23938953	0.0617	FOXA2_FOXJ3	ENST00000408901.3|NGDN|ENSG00000129460.11|neuroguidin, EIF4E binding protein 	ENST00000397154.3|NGDN|ENSG00000129460.11|neuroguidin, EIF4E binding protein 	ENST00000555128.1|NGDN|ENSG00000129460.11|neuroguidin, EIF4E binding protein
hg19_v2_chr21_+_34602200_34602298	0.0611394	FOXA2_FOXJ3	ENST00000382264.3|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2 	ENST00000382241.3|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2 	ENST00000404220.3|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2 	ENST00000342136.4|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2
hg19_v2_chr3_+_122513642_122513664	0.0610356	FOXA2_FOXJ3	ENST00000261038.5|DIRC2|ENSG00000138463.8|disrupted in renal carcinoma 2
hg19_v2_chr7_+_79998864_79998896	0.0604307	FOXA2_FOXJ3	ENST00000435819.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chr17_+_71229346_71229365	0.0599239	FOXA2_FOXJ3	ENST00000535032.2|C17orf80|ENSG00000141219.11|chromosome 17 open reading frame 80 	ENST00000582793.1|C17orf80|ENSG00000141219.11|chromosome 17 open reading frame 80
hg19_v2_chr10_+_62538089_62538244	0.0590186	FOXA2_FOXJ3	ENST00000519078.2|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1 	ENST00000395284.3|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1 	ENST00000316629.4|CDK1|ENSG00000170312.11|cyclin-dependent kinase 1
hg19_v2_chr9_-_110540419_110540419	0.0589041	FOXA2_FOXJ3	ENST00000398726.3|AL162389.1|ENSG00000214645.3|Uncharacterized protein
hg19_v2_chr19_-_53324884_53324922	0.0584856	FOXA2_FOXJ3	ENST00000457749.2|ZNF28|ENSG00000198538.6|zinc finger protein 28 	ENST00000414252.2|ZNF28|ENSG00000198538.6|zinc finger protein 28 	ENST00000391783.2|ZNF28|ENSG00000198538.6|zinc finger protein 28
hg19_v2_chr13_-_47471155_47471214	0.0577186	FOXA2_FOXJ3	ENST00000543956.1|HTR2A|ENSG00000102468.6|5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled 	ENST00000542664.1|HTR2A|ENSG00000102468.6|5-hydroxytryptamine (serotonin) receptor 2A, G protein-coupled
hg19_v2_chr20_+_36373032_36373047	0.0576504	FOXA2_FOXJ3	ENST00000373473.1|CTNNBL1|ENSG00000132792.14|catenin, beta like 1
hg19_v2_chr2_-_111334678_111334762	0.0576324	FOXA2_FOXJ3	ENST00000329516.3|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6 	ENST00000330331.5|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6 	ENST00000446930.1|RGPD6|ENSG00000183054.7|RANBP2-like and GRIP domain containing 6
hg19_v2_chr7_+_142919130_142919130	0.057304	FOXA2_FOXJ3	ENST00000408947.3|TAS2R40|ENSG00000221937.3|taste receptor, type 2, member 40
hg19_v2_chr8_-_41909496_41909512	0.0571791	FOXA2_FOXJ3	ENST00000265713.2|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000406337.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000396930.3|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000485568.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A 	ENST00000426524.1|KAT6A|ENSG00000083168.5|K(lysine) acetyltransferase 6A
hg19_v2_chr14_+_102606181_102606261	0.0571007	FOXA2_FOXJ3	ENST00000335263.5|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000322340.5|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000424963.2|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000342702.3|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000556807.1|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000499851.2|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000558567.1|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000299135.6|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000454394.2|WDR20|ENSG00000140153.13|WD repeat domain 20 	ENST00000556511.2|WDR20|ENSG00000140153.13|WD repeat domain 20
hg19_v2_chr2_+_120770645_120770669	0.0569919	FOXA2_FOXJ3	ENST00000443902.2|EPB41L5|ENSG00000115109.9|erythrocyte membrane protein band 4.1 like 5
hg19_v2_chr19_-_39826639_39826825	0.0562397	FOXA2_FOXJ3	ENST00000602185.1|GMFG|ENSG00000130755.8|glia maturation factor, gamma 	ENST00000598034.1|GMFG|ENSG00000130755.8|glia maturation factor, gamma 	ENST00000601387.1|GMFG|ENSG00000130755.8|glia maturation factor, gamma 	ENST00000595636.1|GMFG|ENSG00000130755.8|glia maturation factor, gamma 	ENST00000253054.8|GMFG|ENSG00000130755.8|glia maturation factor, gamma 	ENST00000594700.1|GMFG|ENSG00000130755.8|glia maturation factor, gamma 	ENST00000597595.1|GMFG|ENSG00000130755.8|glia maturation factor, gamma
hg19_v2_chr22_-_22337154_22337194	0.0555759	FOXA2_FOXJ3	ENST00000413067.2|TOP3B|ENSG00000100038.15|topoisomerase (DNA) III beta 	ENST00000437929.1|TOP3B|ENSG00000100038.15|topoisomerase (DNA) III beta 	ENST00000456075.1|TOP3B|ENSG00000100038.15|topoisomerase (DNA) III beta 	ENST00000434517.1|TOP3B|ENSG00000100038.15|topoisomerase (DNA) III beta 	ENST00000424393.1|TOP3B|ENSG00000100038.15|topoisomerase (DNA) III beta 	ENST00000449704.1|TOP3B|ENSG00000100038.15|topoisomerase (DNA) III beta 	ENST00000437103.1|TOP3B|ENSG00000100038.15|topoisomerase (DNA) III beta
hg19_v2_chr4_+_57845024_57845037	0.0555687	FOXA2_FOXJ3	ENST00000431623.2|POLR2B|ENSG00000047315.10|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 	ENST00000441246.2|POLR2B|ENSG00000047315.10|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
hg19_v2_chr9_-_35812236_35812274	0.0545418	FOXA2_FOXJ3	ENST00000340291.2|SPAG8|ENSG00000137098.9|sperm associated antigen 8
hg19_v2_chr4_-_140223670_140223705	0.0544841	FOXA2_FOXJ3	ENST00000394228.1|NDUFC1|ENSG00000109390.7|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa 	ENST00000539387.1|NDUFC1|ENSG00000109390.7|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa
hg19_v2_chr19_+_55417530_55417546	0.0543487	FOXA2_FOXJ3	ENST00000350790.5|NCR1|ENSG00000189430.8|natural cytotoxicity triggering receptor 1 	ENST00000338835.5|NCR1|ENSG00000189430.8|natural cytotoxicity triggering receptor 1 	ENST00000357397.5|NCR1|ENSG00000189430.8|natural cytotoxicity triggering receptor 1
hg19_v2_chr12_+_53836339_53836474	0.0536935	FOXA2_FOXJ3	ENST00000549135.1|PRR13|ENSG00000205352.6|proline rich 13
hg19_v2_chr16_+_22516172_22516172	0.0536097	FOXA2_FOXJ3	ENST00000543407.1|NPIPB5|ENSG00000243716.6|nuclear pore complex interacting protein family, member B5
hg19_v2_chr10_-_14050522_14050584	0.0532137	FOXA2_FOXJ3	ENST00000342409.2|FRMD4A|ENSG00000151474.15|FERM domain containing 4A
hg19_v2_chr1_+_241695670_241695705	0.0531617	FOXA2_FOXJ3	ENST00000366557.4|KMO|ENSG00000117009.7|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)
hg19_v2_chr8_-_93978357_93978379	0.0528789	FOXA2_FOXJ3	ENST00000522925.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000522903.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000537541.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000518748.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000519069.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000521988.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr9_-_39288092_39288300	0.0524141	FOXA2_FOXJ3	ENST00000323947.7|CNTNAP3|ENSG00000106714.13|contactin associated protein-like 3 	ENST00000297668.6|CNTNAP3|ENSG00000106714.13|contactin associated protein-like 3 	ENST00000377656.2|CNTNAP3|ENSG00000106714.13|contactin associated protein-like 3 	ENST00000377659.1|CNTNAP3|ENSG00000106714.13|contactin associated protein-like 3
hg19_v2_chr14_+_56078695_56078784	0.0523711	FOXA2_FOXJ3	ENST00000416613.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor)
hg19_v2_chr7_+_149570049_149570057	0.0523034	FOXA2_FOXJ3	ENST00000421974.2|ATP6V0E2|ENSG00000171130.13|ATPase, H+ transporting V0 subunit e2 	ENST00000456496.2|ATP6V0E2|ENSG00000171130.13|ATPase, H+ transporting V0 subunit e2
hg19_v2_chr5_+_162932554_162932661	0.0521739	FOXA2_FOXJ3	ENST00000321757.6|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta 	ENST00000421814.2|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta 	ENST00000518095.1|MAT2B|ENSG00000038274.12|methionine adenosyltransferase II, beta
hg19_v2_chr9_+_127054217_127054252	0.0521692	FOXA2_FOXJ3	ENST00000394199.2|NEK6|ENSG00000119408.12|NIMA-related kinase 6 	ENST00000546191.1|NEK6|ENSG00000119408.12|NIMA-related kinase 6
hg19_v2_chr2_+_110551851_110551977	0.0518976	FOXA2_FOXJ3	ENST00000272454.6|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5 	ENST00000430736.1|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5 	ENST00000016946.3|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5 	ENST00000441344.1|RGPD5|ENSG00000015568.8|RANBP2-like and GRIP domain containing 5
hg19_v2_chr12_-_96390108_96390143	0.051507	FOXA2_FOXJ3	ENST00000538703.1|HAL|ENSG00000084110.6|histidine ammonia-lyase 	ENST00000261208.3|HAL|ENSG00000084110.6|histidine ammonia-lyase
hg19_v2_chr21_-_46293644_46293752	0.0515001	FOXA2_FOXJ3	ENST00000330938.3|PTTG1IP|ENSG00000183255.7|pituitary tumor-transforming 1 interacting protein
hg19_v2_chr16_-_21877629_21877629	0.0501561	FOXA2_FOXJ3	ENST00000544693.1|NPIPB4|ENSG00000185864.12|nuclear pore complex interacting protein family, member B4
hg19_v2_chr2_+_65283529_65283599	0.0500844	FOXA2_FOXJ3	ENST00000546106.1|CEP68|ENSG00000011523.9|centrosomal protein 68kDa 	ENST00000537589.1|CEP68|ENSG00000011523.9|centrosomal protein 68kDa 	ENST00000260569.4|CEP68|ENSG00000011523.9|centrosomal protein 68kDa
hg19_v2_chr3_-_151102529_151102600	0.0499274	FOXA2_FOXJ3	ENST00000302632.3|P2RY12|ENSG00000169313.9|purinergic receptor P2Y, G-protein coupled, 12
hg19_v2_chrX_+_40440146_40440268	0.0487852	FOXA2_FOXJ3	ENST00000535539.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000378438.4|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000436783.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000544975.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000535777.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000447485.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2 	ENST00000423649.1|ATP6AP2|ENSG00000182220.9|ATPase, H+ transporting, lysosomal accessory protein 2
hg19_v2_chr14_-_90798273_90798323	0.0487344	FOXA2_FOXJ3	ENST00000357904.3|NRDE2|ENSG00000119720.13|NRDE-2, necessary for RNA interference, domain containing
hg19_v2_chr3_-_71179988_71180085	0.0485923	FOXA2_FOXJ3	ENST00000491238.1|FOXP1|ENSG00000114861.14|forkhead box P1
hg19_v2_chr7_+_12250886_12250933	0.0483861	FOXA2_FOXJ3	ENST00000444443.1|TMEM106B|ENSG00000106460.14|transmembrane protein 106B 	ENST00000396667.3|TMEM106B|ENSG00000106460.14|transmembrane protein 106B
hg19_v2_chr1_+_145883868_145883868	0.0482265	FOXA2_FOXJ3	ENST00000447947.2|GPR89C|ENSG00000196644.8|G protein-coupled receptor 89C
hg19_v2_chr11_-_94226964_94227025	0.0478361	FOXA2_FOXJ3	ENST00000538923.1|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 	ENST00000540013.1|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 	ENST00000407439.3|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 	ENST00000393241.4|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)
hg19_v2_chr8_+_87878640_87878673	0.047634	FOXA2_FOXJ3	ENST00000518476.1|CNBD1|ENSG00000176571.7|cyclic nucleotide binding domain containing 1
hg19_v2_chr7_+_80275621_80275648	0.04722	FOXA2_FOXJ3	ENST00000426978.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor) 	ENST00000432207.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chr16_+_15489603_15489627	0.0466045	FOXA2_FOXJ3	ENST00000568766.1|RP11-1021N1.1|ENSG00000261130.1|Uncharacterized protein  	ENST00000287594.7|MPV17L|ENSG00000156968.8|MPV17 mitochondrial membrane protein-like
hg19_v2_chr21_+_34602377_34602487	0.0465204	FOXA2_FOXJ3	ENST00000342101.3|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2 	ENST00000413881.1|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2 	ENST00000443073.1|IFNAR2|ENSG00000159110.15|interferon (alpha, beta and omega) receptor 2
hg19_v2_chr2_+_88047606_88047606	0.0456959	FOXA2_FOXJ3	ENST00000359481.4|PLGLB2|ENSG00000125551.14|plasminogen-like B2
hg19_v2_chr2_+_219646462_219646498	0.0452594	FOXA2_FOXJ3	ENST00000258415.4|CYP27A1|ENSG00000135929.4|cytochrome P450, family 27, subfamily A, polypeptide 1
hg19_v2_chr9_-_130679257_130679336	0.0442858	FOXA2_FOXJ3	ENST00000361444.3|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 	ENST00000335791.5|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 	ENST00000343609.2|ST6GALNAC4|ENSG00000136840.14|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4
hg19_v2_chr9_-_140196703_140196744	0.044225	FOXA2_FOXJ3	ENST00000356628.2|NRARP|ENSG00000198435.2|NOTCH-regulated ankyrin repeat protein
hg19_v2_chr1_-_114430169_114430195	0.0441353	FOXA2_FOXJ3	ENST00000393316.3|BCL2L15|ENSG00000188761.7|BCL2-like 15
hg19_v2_chr9_-_104198042_104198105	0.0429113	FOXA2_FOXJ3	ENST00000374855.4|ALDOB|ENSG00000136872.13|aldolase B, fructose-bisphosphate
hg19_v2_chr14_-_31926701_31926734	0.042536	FOXA2_FOXJ3	ENST00000310850.4|DTD2|ENSG00000129480.8|D-tyrosyl-tRNA deacylase 2 (putative)
hg19_v2_chr3_+_128968437_128968505	0.0423262	FOXA2_FOXJ3	ENST00000314797.6|COPG1|ENSG00000181789.10|coatomer protein complex, subunit gamma 1
hg19_v2_chr11_-_47447970_47448029	0.0421716	FOXA2_FOXJ3	ENST00000298852.3|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3 	ENST00000530912.1|PSMC3|ENSG00000165916.4|proteasome (prosome, macropain) 26S subunit, ATPase, 3
hg19_v2_chr11_+_62554860_62554902	0.0416728	FOXA2_FOXJ3	ENST00000533861.1|TMEM179B|ENSG00000185475.4|transmembrane protein 179B 	ENST00000333449.4|TMEM179B|ENSG00000185475.4|transmembrane protein 179B
hg19_v2_chr20_+_33104199_33104260	0.041488	FOXA2_FOXJ3	ENST00000357156.2|DYNLRB1|ENSG00000125971.12|dynein, light chain, roadblock-type 1 	ENST00000417166.2|DYNLRB1|ENSG00000125971.12|dynein, light chain, roadblock-type 1 	ENST00000300469.9|DYNLRB1|ENSG00000125971.12|dynein, light chain, roadblock-type 1 	ENST00000374846.3|DYNLRB1|ENSG00000125971.12|dynein, light chain, roadblock-type 1
hg19_v2_chr20_-_1165117_1165117	0.0413008	FOXA2_FOXJ3	ENST00000381894.3|TMEM74B|ENSG00000125895.5|transmembrane protein 74B
hg19_v2_chr17_-_26662464_26662519	0.0410254	FOXA2_FOXJ3	ENST00000579419.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000585313.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000395418.3|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000578985.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000577498.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000585089.1|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas) 	ENST00000357896.3|IFT20|ENSG00000109083.9|intraflagellar transport 20 homolog (Chlamydomonas)
hg19_v2_chr21_+_40817749_40817868	0.0402579	FOXA2_FOXJ3	ENST00000380637.3|SH3BGR|ENSG00000185437.9|SH3 domain binding glutamic acid-rich protein 	ENST00000380634.1|SH3BGR|ENSG00000185437.9|SH3 domain binding glutamic acid-rich protein 	ENST00000458295.1|SH3BGR|ENSG00000185437.9|SH3 domain binding glutamic acid-rich protein 	ENST00000440288.2|SH3BGR|ENSG00000185437.9|SH3 domain binding glutamic acid-rich protein 	ENST00000380631.1|SH3BGR|ENSG00000185437.9|SH3 domain binding glutamic acid-rich protein
hg19_v2_chr20_+_36322408_36322516	0.0401227	FOXA2_FOXJ3	ENST00000361383.6|CTNNBL1|ENSG00000132792.14|catenin, beta like 1 	ENST00000447935.1|CTNNBL1|ENSG00000132792.14|catenin, beta like 1 	ENST00000405275.2|CTNNBL1|ENSG00000132792.14|catenin, beta like 1
hg19_v2_chr2_+_202047843_202047918	0.0388529	FOXA2_FOXJ3	ENST00000272879.5|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase 	ENST00000374650.3|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase 	ENST00000346817.5|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase 	ENST00000313728.7|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase 	ENST00000448480.1|CASP10|ENSG00000003400.10|caspase 10, apoptosis-related cysteine peptidase
hg19_v2_chr17_-_41050716_41050751	0.0385922	FOXA2_FOXJ3	ENST00000417193.1|LINC00671|ENSG00000213373.3|long intergenic non-protein coding RNA 671 	ENST00000301683.3|LINC00671|ENSG00000213373.3|long intergenic non-protein coding RNA 671 	ENST00000436546.1|LINC00671|ENSG00000213373.3|long intergenic non-protein coding RNA 671 	ENST00000431109.2|LINC00671|ENSG00000213373.3|long intergenic non-protein coding RNA 671
hg19_v2_chr2_-_175260368_175260450	0.0380444	FOXA2_FOXJ3	ENST00000342016.3|CIR1|ENSG00000138433.11|corepressor interacting with RBPJ, 1 	ENST00000362053.5|CIR1|ENSG00000138433.11|corepressor interacting with RBPJ, 1
hg19_v2_chr5_+_140552218_140552244	0.037198	FOXA2_FOXJ3	ENST00000231137.3|PCDHB7|ENSG00000113212.4|protocadherin beta 7
hg19_v2_chr15_+_56657613_56657651	0.0351678	FOXA2_FOXJ3	ENST00000352903.2|TEX9|ENSG00000151575.10|testis expressed 9 	ENST00000537232.1|TEX9|ENSG00000151575.10|testis expressed 9 	ENST00000561221.2|TEX9|ENSG00000151575.10|testis expressed 9 	ENST00000558083.2|TEX9|ENSG00000151575.10|testis expressed 9
hg19_v2_chr11_-_118095801_118095814	0.0343177	FOXA2_FOXJ3	ENST00000356289.5|AMICA1|ENSG00000160593.13|adhesion molecule, interacts with CXADR antigen 1
hg19_v2_chr14_-_31926623_31926656	0.0343144	FOXA2_FOXJ3	ENST00000356180.4|DTD2|ENSG00000129480.8|D-tyrosyl-tRNA deacylase 2 (putative)
hg19_v2_chr6_+_54172653_54172764	0.0340565	FOXA2_FOXJ3	ENST00000370869.3|TINAG|ENSG00000137251.11|tubulointerstitial nephritis antigen
hg19_v2_chr18_-_25616519_25616549	0.0334154	FOXA2_FOXJ3	ENST00000399380.3|CDH2|ENSG00000170558.4|cadherin 2, type 1, N-cadherin (neuronal)
hg19_v2_chr14_+_50234827_50234886	0.0331933	FOXA2_FOXJ3	ENST00000554589.1|KLHDC2|ENSG00000165516.6|kelch domain containing 2 	ENST00000557247.1|KLHDC2|ENSG00000165516.6|kelch domain containing 2
hg19_v2_chr1_+_33439268_33439268	0.0326741	FOXA2_FOXJ3	ENST00000594612.1|FKSG48|ENSG00000267885.1|FKSG48
hg19_v2_chr14_+_24439148_24439196	0.03257	FOXA2_FOXJ3	ENST00000543805.1|DHRS4L2|ENSG00000187630.10|dehydrogenase/reductase (SDR family) member 4 like 2 	ENST00000534993.1|DHRS4L2|ENSG00000187630.10|dehydrogenase/reductase (SDR family) member 4 like 2
hg19_v2_chr5_+_71616188_71616230	0.0306255	FOXA2_FOXJ3	ENST00000380639.5|PTCD2|ENSG00000049883.10|pentatricopeptide repeat domain 2 	ENST00000543322.1|PTCD2|ENSG00000049883.10|pentatricopeptide repeat domain 2 	ENST00000503868.1|PTCD2|ENSG00000049883.10|pentatricopeptide repeat domain 2 	ENST00000510676.2|PTCD2|ENSG00000049883.10|pentatricopeptide repeat domain 2 	ENST00000536805.1|PTCD2|ENSG00000049883.10|pentatricopeptide repeat domain 2
hg19_v2_chr7_-_14880892_14881075	0.0302214	FOXA2_FOXJ3	ENST00000406247.3|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa 	ENST00000399322.3|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa 	ENST00000258767.5|DGKB|ENSG00000136267.9|diacylglycerol kinase, beta 90kDa
hg19_v2_chr11_-_94227029_94227074	0.0294114	FOXA2_FOXJ3	ENST00000323977.3|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 	ENST00000536754.1|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae) 	ENST00000323929.3|MRE11A|ENSG00000020922.8|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)
hg19_v2_chr11_+_58695174_58695188	0.0292907	FOXA2_FOXJ3	ENST00000317391.4|GLYATL1|ENSG00000166840.9|glycine-N-acyltransferase-like 1
hg19_v2_chr14_+_56127989_56128008	0.0288776	FOXA2_FOXJ3	ENST00000555573.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor)
hg19_v2_chr11_-_26593677_26593708	0.0284965	FOXA2_FOXJ3	ENST00000527569.1|MUC15|ENSG00000169550.8|mucin 15, cell surface associated
hg19_v2_chr8_+_67104323_67104350	0.0277244	FOXA2_FOXJ3	ENST00000518412.1|LINC00967|ENSG00000253138.1|long intergenic non-protein coding RNA 967 	ENST00000518035.1|LINC00967|ENSG00000253138.1|long intergenic non-protein coding RNA 967 	ENST00000517725.1|LINC00967|ENSG00000253138.1|long intergenic non-protein coding RNA 967
hg19_v2_chr2_-_191878681_191878823	0.0276596	FOXA2_FOXJ3	ENST00000409465.1|STAT1|ENSG00000115415.14|signal transducer and activator of transcription 1, 91kDa
hg19_v2_chr7_-_56119156_56119163	0.0272828	FOXA2_FOXJ3	ENST00000421312.1|PSPH|ENSG00000146733.9|phosphoserine phosphatase 	ENST00000416592.1|PSPH|ENSG00000146733.9|phosphoserine phosphatase
hg19_v2_chr4_+_88754113_88754139	0.026294	FOXA2_FOXJ3	ENST00000560249.1|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000540395.1|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000511670.1|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000361056.3|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein
hg19_v2_chr1_-_1310870_1310920	0.0261648	FOXA2_FOXJ3	ENST00000338338.5|AURKAIP1|ENSG00000175756.9|aurora kinase A interacting protein 1
hg19_v2_chr19_+_36630454_36630489	0.0257881	FOXA2_FOXJ3	ENST00000246533.3|CAPNS1|ENSG00000126247.6|calpain, small subunit 1
hg19_v2_chr1_-_3566627_3566676	0.0249209	FOXA2_FOXJ3	ENST00000419924.2|WRAP73|ENSG00000116213.11|WD repeat containing, antisense to TP73 	ENST00000270708.7|WRAP73|ENSG00000116213.11|WD repeat containing, antisense to TP73
hg19_v2_chr8_-_93978346_93978355	0.0246584	FOXA2_FOXJ3	ENST00000523580.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr1_-_3566590_3566622	0.0244025	FOXA2_FOXJ3	ENST00000424367.1|WRAP73|ENSG00000116213.11|WD repeat containing, antisense to TP73 	ENST00000378322.3|WRAP73|ENSG00000116213.11|WD repeat containing, antisense to TP73
hg19_v2_chr3_+_121902511_121902539	0.0242918	FOXA2_FOXJ3	ENST00000490131.1|CASR|ENSG00000036828.9|calcium-sensing receptor
hg19_v2_chr12_+_2986359_2986421	0.02381	FOXA2_FOXJ3	ENST00000538636.1|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000461997.2|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000489288.2|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000366285.2|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1 	ENST00000538700.1|RHNO1|ENSG00000171792.6|RAD9-HUS1-RAD1 interacting nuclear orphan 1
hg19_v2_chr16_-_28857677_28857729	0.0235692	FOXA2_FOXJ3	ENST00000313511.3|TUFM|ENSG00000178952.4|Tu translation elongation factor, mitochondrial
hg19_v2_chr14_+_38241588_38241588	0.0234809	FOXA2_FOXJ3	ENST00000476979.1|TTC6|ENSG00000139865.12|tetratricopeptide repeat domain 6
hg19_v2_chr2_-_3521518_3521518	0.0234684	FOXA2_FOXJ3	ENST00000382093.5|ADI1|ENSG00000182551.9|acireductone dioxygenase 1
hg19_v2_chr8_-_93978333_93978345	0.0226706	FOXA2_FOXJ3	ENST00000524037.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000520430.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000521617.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr1_+_181452678_181452716	0.0225193	FOXA2_FOXJ3	ENST00000367570.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000526775.1|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000357570.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000358338.5|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit 	ENST00000367567.4|CACNA1E|ENSG00000198216.6|calcium channel, voltage-dependent, R type, alpha 1E subunit
hg19_v2_chr7_-_33140498_33140517	0.0220467	FOXA2_FOXJ3	ENST00000448915.1|RP9|ENSG00000164610.4|retinitis pigmentosa 9 (autosomal dominant)
hg19_v2_chr2_-_180427304_180427323	0.0218602	FOXA2_FOXJ3	ENST00000336917.5|ZNF385B|ENSG00000144331.14|zinc finger protein 385B
hg19_v2_chr9_-_13175823_13175869	0.0217026	FOXA2_FOXJ3	ENST00000545857.1|MPDZ|ENSG00000107186.12|multiple PDZ domain protein
hg19_v2_chr8_-_93978309_93978331	0.021541	FOXA2_FOXJ3	ENST00000517858.1|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing 	ENST00000378861.5|TRIQK|ENSG00000205133.7|triple QxxK/R motif containing
hg19_v2_chr19_-_40030861_40030873	0.021459	FOXA2_FOXJ3	ENST00000390658.2|EID2|ENSG00000176396.9|EP300 interacting inhibitor of differentiation 2
hg19_v2_chr9_-_70490107_70490246	0.0211217	FOXA2_FOXJ3	ENST00000377395.4|CBWD5|ENSG00000147996.12|COBW domain containing 5 	ENST00000429800.2|CBWD5|ENSG00000147996.12|COBW domain containing 5 	ENST00000430059.2|CBWD5|ENSG00000147996.12|COBW domain containing 5 	ENST00000377384.1|CBWD5|ENSG00000147996.12|COBW domain containing 5 	ENST00000382405.3|CBWD5|ENSG00000147996.12|COBW domain containing 5
hg19_v2_chr3_-_183145873_183146063	0.0211071	FOXA2_FOXJ3	ENST00000447025.2|MCF2L2|ENSG00000053524.7|MCF.2 cell line derived transforming sequence-like 2 	ENST00000414362.2|MCF2L2|ENSG00000053524.7|MCF.2 cell line derived transforming sequence-like 2 	ENST00000328913.3|MCF2L2|ENSG00000053524.7|MCF.2 cell line derived transforming sequence-like 2
hg19_v2_chr12_+_32832134_32832196	0.0209823	FOXA2_FOXJ3	ENST00000452533.2|DNM1L|ENSG00000087470.13|dynamin 1-like
hg19_v2_chr5_+_159436120_159436176	0.0208719	FOXA2_FOXJ3	ENST00000522793.1|TTC1|ENSG00000113312.6|tetratricopeptide repeat domain 1 	ENST00000231238.5|TTC1|ENSG00000113312.6|tetratricopeptide repeat domain 1
hg19_v2_chr5_-_153418407_153418503	0.0200372	FOXA2_FOXJ3	ENST00000522858.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000522634.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000523705.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000524246.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000520313.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000518102.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000351797.4|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000520667.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000519808.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2 	ENST00000522395.1|FAM114A2|ENSG00000055147.13|family with sequence similarity 114, member A2
hg19_v2_chr7_-_139876812_139876860	0.0199357	FOXA2_FOXJ3	ENST00000397560.2|JHDM1D|ENSG00000006459.6|lysine (K)-specific demethylase 7A
hg19_v2_chr7_+_80275752_80275779	0.0197949	FOXA2_FOXJ3	ENST00000419819.2|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chr2_-_113191096_113191222	0.0197448	FOXA2_FOXJ3	ENST00000496537.1|RGPD8|ENSG00000169629.7|RANBP2-like and GRIP domain containing 8 	ENST00000330575.5|RGPD8|ENSG00000169629.7|RANBP2-like and GRIP domain containing 8 	ENST00000302558.3|RGPD8|ENSG00000169629.7|RANBP2-like and GRIP domain containing 8
hg19_v2_chr14_+_22636283_22636325	0.0196585	FOXA2_FOXJ3	ENST00000557168.1|TRAV30|ENSG00000259092.1|T cell receptor alpha variable 30
hg19_v2_chr18_-_52626622_52626739	0.0192453	FOXA2_FOXJ3	ENST00000591504.1|CCDC68|ENSG00000166510.9|coiled-coil domain containing 68
hg19_v2_chr8_+_48920960_48921011	0.0184856	FOXA2_FOXJ3	ENST00000523111.2|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000523432.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000521346.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2 	ENST00000517630.1|UBE2V2|ENSG00000169139.7|ubiquitin-conjugating enzyme E2 variant 2
hg19_v2_chr19_+_55417499_55417521	0.0178768	FOXA2_FOXJ3	ENST00000291890.4|NCR1|ENSG00000189430.8|natural cytotoxicity triggering receptor 1 	ENST00000447255.1|NCR1|ENSG00000189430.8|natural cytotoxicity triggering receptor 1 	ENST00000598576.1|NCR1|ENSG00000189430.8|natural cytotoxicity triggering receptor 1 	ENST00000594765.1|NCR1|ENSG00000189430.8|natural cytotoxicity triggering receptor 1
hg19_v2_chr10_+_90672113_90672113	0.0174269	FOXA2_FOXJ3	ENST00000371922.1|STAMBPL1|ENSG00000138134.7|STAM binding protein-like 1
hg19_v2_chr3_-_154042205_154042229	0.0172687	FOXA2_FOXJ3	ENST00000329463.5|DHX36|ENSG00000174953.9|DEAH (Asp-Glu-Ala-His) box polypeptide 36
hg19_v2_chr15_-_40600026_40600061	0.0169778	FOXA2_FOXJ3	ENST00000456256.2|PLCB2|ENSG00000137841.7|phospholipase C, beta 2 	ENST00000557821.1|PLCB2|ENSG00000137841.7|phospholipase C, beta 2
hg19_v2_chr4_-_186456766_186456794	0.0157712	FOXA2_FOXJ3	ENST00000284771.6|PDLIM3|ENSG00000154553.9|PDZ and LIM domain 3
hg19_v2_chr2_+_46844290_46844384	0.0157536	FOXA2_FOXJ3	ENST00000238892.3|CRIPT|ENSG00000119878.5|cysteine-rich PDZ-binding protein
hg19_v2_chr1_+_52082751_52082781	0.0157357	FOXA2_FOXJ3	ENST00000447887.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000435686.2|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000428468.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9 	ENST00000453295.1|OSBPL9|ENSG00000117859.14|oxysterol binding protein-like 9
hg19_v2_chr6_-_100016492_100016526	0.0156616	FOXA2_FOXJ3	ENST00000369217.4|CCNC|ENSG00000112237.8|cyclin C 	ENST00000369220.4|CCNC|ENSG00000112237.8|cyclin C 	ENST00000482541.2|CCNC|ENSG00000112237.8|cyclin C
hg19_v2_chr1_-_168464875_168464884	0.0151019	FOXA2_FOXJ3	ENST00000422253.1|RP5-968D22.3|ENSG00000237658.1|RP5-968D22.3
hg19_v2_chr4_+_187187337_187187369	0.0150913	FOXA2_FOXJ3	ENST00000492972.2|F11|ENSG00000088926.9|coagulation factor XI
hg19_v2_chr5_+_153418466_153418565	0.0144824	FOXA2_FOXJ3	ENST00000522782.1|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000439768.2|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000436816.1|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000322602.5|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000522177.1|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3 	ENST00000520899.1|MFAP3|ENSG00000037749.7|microfibrillar-associated protein 3
hg19_v2_chr1_-_28559502_28559570	0.0144817	FOXA2_FOXJ3	ENST00000263697.4|DNAJC8|ENSG00000126698.6|DnaJ (Hsp40) homolog, subfamily C, member 8
hg19_v2_chr16_+_66442411_66442461	0.0144493	FOXA2_FOXJ3	ENST00000499966.1|LINC00920|ENSG00000246898.1|long intergenic non-protein coding RNA 920
hg19_v2_chr11_+_2405833_2405893	0.0142994	FOXA2_FOXJ3	ENST00000527343.1|CD81|ENSG00000110651.7|CD81 molecule 	ENST00000464784.2|CD81|ENSG00000110651.7|CD81 molecule
hg19_v2_chr5_-_218251_218330	0.0136211	FOXA2_FOXJ3	ENST00000296824.3|CCDC127|ENSG00000164366.3|coiled-coil domain containing 127
hg19_v2_chr3_-_183145765_183145813	0.013517	FOXA2_FOXJ3	ENST00000473233.1|MCF2L2|ENSG00000053524.7|MCF.2 cell line derived transforming sequence-like 2
hg19_v2_chr11_-_9286921_9286937	0.0122311	FOXA2_FOXJ3	ENST00000328194.3|DENND5A|ENSG00000184014.3|DENN/MADD domain containing 5A
hg19_v2_chr4_-_186456652_186456668	0.0122014	FOXA2_FOXJ3	ENST00000284767.5|PDLIM3|ENSG00000154553.9|PDZ and LIM domain 3 	ENST00000284770.5|PDLIM3|ENSG00000154553.9|PDZ and LIM domain 3
hg19_v2_chr3_-_64009658_64009687	0.012143	FOXA2_FOXJ3	ENST00000394431.2|PSMD6|ENSG00000163636.6|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
hg19_v2_chr3_-_172859017_172859058	0.0121381	FOXA2_FOXJ3	ENST00000351008.3|SPATA16|ENSG00000144962.6|spermatogenesis associated 16
hg19_v2_chr7_-_30726065_30726065	0.0120882	FOXA2_FOXJ3	ENST00000341843.4|CRHR2|ENSG00000106113.14|corticotropin releasing hormone receptor 2
hg19_v2_chr17_+_42148225_42148317	0.0116249	FOXA2_FOXJ3	ENST00000591696.1|G6PC3|ENSG00000141349.4|glucose 6 phosphatase, catalytic, 3
hg19_v2_chr1_+_150488205_150488251	0.011456	FOXA2_FOXJ3	ENST00000416894.1|LINC00568|ENSG00000228126.1|long intergenic non-protein coding RNA 568
hg19_v2_chr4_+_74347400_74347479	0.0112408	FOXA2_FOXJ3	ENST00000226355.3|AFM|ENSG00000079557.3|afamin
hg19_v2_chr1_-_1342617_1342693	0.0102084	FOXA2_FOXJ3	ENST00000482352.1|MRPL20|ENSG00000242485.1|mitochondrial ribosomal protein L20 	ENST00000344843.7|MRPL20|ENSG00000242485.1|mitochondrial ribosomal protein L20
hg19_v2_chr7_+_62809239_62809239	0.0100882	FOXA2_FOXJ3	ENST00000456890.1|AC006455.1|ENSG00000230000.1|AC006455.1
hg19_v2_chr6_-_41715128_41715142	0.009564	FOXA2_FOXJ3	ENST00000356667.4|PGC|ENSG00000096088.12|progastricsin (pepsinogen C) 	ENST00000373025.3|PGC|ENSG00000096088.12|progastricsin (pepsinogen C) 	ENST00000425343.2|PGC|ENSG00000096088.12|progastricsin (pepsinogen C)
hg19_v2_chr3_+_132843652_132843709	0.00952693	FOXA2_FOXJ3	ENST00000508711.1|TMEM108|ENSG00000144868.9|transmembrane protein 108
hg19_v2_chr16_-_4817129_4817219	0.00943608	FOXA2_FOXJ3	ENST00000545009.1|ZNF500|ENSG00000103199.9|zinc finger protein 500 	ENST00000219478.6|ZNF500|ENSG00000103199.9|zinc finger protein 500
hg19_v2_chr13_-_103346854_103346854	0.00902487	FOXA2_FOXJ3	ENST00000267273.6|METTL21C|ENSG00000139780.7|methyltransferase like 21C
hg19_v2_chr13_-_46756351_46756459	0.00865255	FOXA2_FOXJ3	ENST00000323076.2|LCP1|ENSG00000136167.9|lymphocyte cytosolic protein 1 (L-plastin)
hg19_v2_chr14_+_35747825_35747847	0.0079523	FOXA2_FOXJ3	ENST00000540871.1|PSMA6|ENSG00000100902.6|proteasome (prosome, macropain) subunit, alpha type, 6
hg19_v2_chr1_+_203830703_203830743	0.00790637	FOXA2_FOXJ3	ENST00000414487.2|SNRPE|ENSG00000182004.8|small nuclear ribonucleoprotein polypeptide E
hg19_v2_chr7_+_80275953_80275969	0.00776391	FOXA2_FOXJ3	ENST00000538969.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor) 	ENST00000544133.1|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor) 	ENST00000433696.2|CD36|ENSG00000135218.13|CD36 molecule (thrombospondin receptor)
hg19_v2_chr3_+_119298523_119298644	0.00724894	FOXA2_FOXJ3	ENST00000357003.3|ADPRH|ENSG00000144843.7|ADP-ribosylarginine hydrolase
hg19_v2_chr9_-_21305312_21305312	0.00721277	FOXA2_FOXJ3	ENST00000259555.4|IFNA5|ENSG00000147873.4|interferon, alpha 5
hg19_v2_chr15_+_49462434_49462488	0.00714672	FOXA2_FOXJ3	ENST00000558145.1|GALK2|ENSG00000156958.10|galactokinase 2 	ENST00000543495.1|GALK2|ENSG00000156958.10|galactokinase 2 	ENST00000544523.1|GALK2|ENSG00000156958.10|galactokinase 2 	ENST00000560138.1|GALK2|ENSG00000156958.10|galactokinase 2
hg19_v2_chr2_-_191878874_191878976	0.00687545	FOXA2_FOXJ3	ENST00000392322.3|STAT1|ENSG00000115415.14|signal transducer and activator of transcription 1, 91kDa 	ENST00000392323.2|STAT1|ENSG00000115415.14|signal transducer and activator of transcription 1, 91kDa 	ENST00000424722.1|STAT1|ENSG00000115415.14|signal transducer and activator of transcription 1, 91kDa 	ENST00000361099.3|STAT1|ENSG00000115415.14|signal transducer and activator of transcription 1, 91kDa
hg19_v2_chr19_+_15160130_15160195	0.00680325	FOXA2_FOXJ3	ENST00000427043.3|CASP14|ENSG00000105141.4|caspase 14, apoptosis-related cysteine peptidase
hg19_v2_chr4_+_88754069_88754112	0.00592309	FOXA2_FOXJ3	ENST00000395102.4|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein 	ENST00000497649.2|MEPE|ENSG00000152595.12|matrix extracellular phosphoglycoprotein
hg19_v2_chr3_-_154042235_154042290	0.00589716	FOXA2_FOXJ3	ENST00000308361.6|DHX36|ENSG00000174953.9|DEAH (Asp-Glu-Ala-His) box polypeptide 36 	ENST00000496811.1|DHX36|ENSG00000174953.9|DEAH (Asp-Glu-Ala-His) box polypeptide 36 	ENST00000544526.1|DHX36|ENSG00000174953.9|DEAH (Asp-Glu-Ala-His) box polypeptide 36
hg19_v2_chr6_-_122792919_122792970	0.00586131	FOXA2_FOXJ3	ENST00000339697.4|SERINC1|ENSG00000111897.6|serine incorporator 1
hg19_v2_chr20_-_62582475_62582484	0.00510808	FOXA2_FOXJ3	ENST00000369908.5|UCKL1|ENSG00000198276.9|uridine-cytidine kinase 1-like 1
hg19_v2_chr4_+_68424434_68424453	0.00496378	FOXA2_FOXJ3	ENST00000265404.2|STAP1|ENSG00000035720.3|signal transducing adaptor family member 1 	ENST00000396225.1|STAP1|ENSG00000035720.3|signal transducing adaptor family member 1
hg19_v2_chr5_-_60240858_60240905	0.00471283	FOXA2_FOXJ3	ENST00000426742.2|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8 	ENST00000265038.5|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8 	ENST00000543101.1|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8 	ENST00000439176.1|ERCC8|ENSG00000049167.9|excision repair cross-complementing rodent repair deficiency, complementation group 8
hg19_v2_chr3_-_105588231_105588396	0.00423068	FOXA2_FOXJ3	ENST00000545639.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000394027.3|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000438603.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000447441.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000443752.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr22_-_22337204_22337215	0.00387503	FOXA2_FOXJ3	ENST00000430142.1|TOP3B|ENSG00000100038.15|topoisomerase (DNA) III beta 	ENST00000357179.5|TOP3B|ENSG00000100038.15|topoisomerase (DNA) III beta
hg19_v2_chr15_-_65321943_65321984	0.00363293	FOXA2_FOXJ3	ENST00000220058.4|MTFMT|ENSG00000103707.5|mitochondrial methionyl-tRNA formyltransferase
hg19_v2_chrX_-_133792480_133792522	0.00348727	FOXA2_FOXJ3	ENST00000359237.4|PLAC1|ENSG00000170965.5|placenta-specific 1
hg19_v2_chr5_-_131132658_131132719	0.00345555	FOXA2_FOXJ3	ENST00000514667.1|CTC-432M15.3|ENSG00000273217.1|Folliculin-interacting protein 1  	ENST00000511848.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000510461.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr15_+_35270552_35270552	0.00342216	FOXA2_FOXJ3	ENST00000391457.2|AC114546.1|ENSG00000212768.2|HCG37415; PRO1914; Uncharacterized protein
hg19_v2_chr12_+_32832203_32832270	0.00251268	FOXA2_FOXJ3	ENST00000553257.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000549701.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000358214.5|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000266481.6|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000551476.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000550154.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000547312.1|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000414834.2|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000381000.4|DNM1L|ENSG00000087470.13|dynamin 1-like 	ENST00000548750.1|DNM1L|ENSG00000087470.13|dynamin 1-like
hg19_v2_chr2_-_27886460_27886511	0.00185757	FOXA2_FOXJ3	ENST00000404798.2|SUPT7L|ENSG00000119760.11|suppressor of Ty 7 (S. cerevisiae)-like 	ENST00000405491.1|SUPT7L|ENSG00000119760.11|suppressor of Ty 7 (S. cerevisiae)-like 	ENST00000464789.2|SUPT7L|ENSG00000119760.11|suppressor of Ty 7 (S. cerevisiae)-like 	ENST00000406540.1|SUPT7L|ENSG00000119760.11|suppressor of Ty 7 (S. cerevisiae)-like
hg19_v2_chr11_+_22696314_22696332	0.00149768	FOXA2_FOXJ3	ENST00000532398.1|GAS2|ENSG00000148935.6|growth arrest-specific 2 	ENST00000433790.1|GAS2|ENSG00000148935.6|growth arrest-specific 2
hg19_v2_chrX_-_70329118_70329194	0.00146652	FOXA2_FOXJ3	ENST00000374188.3|IL2RG|ENSG00000147168.8|interleukin 2 receptor, gamma
hg19_v2_chr12_+_27175476_27175518	0.00114578	FOXA2_FOXJ3	ENST00000546323.1|MED21|ENSG00000152944.4|mediator complex subunit 21 	ENST00000282892.3|MED21|ENSG00000152944.4|mediator complex subunit 21
hg19_v2_chr13_+_41885341_41885443	0.000960969	FOXA2_FOXJ3	ENST00000379406.3|NAA16|ENSG00000172766.14|N(alpha)-acetyltransferase 16, NatA auxiliary subunit 	ENST00000379367.3|NAA16|ENSG00000172766.14|N(alpha)-acetyltransferase 16, NatA auxiliary subunit 	ENST00000403412.3|NAA16|ENSG00000172766.14|N(alpha)-acetyltransferase 16, NatA auxiliary subunit
hg19_v2_chrX_+_78003204_78003248	0.000750083	FOXA2_FOXJ3	ENST00000435339.3|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4 	ENST00000514744.1|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4
hg19_v2_chr15_+_57998923_57998934	0.000269735	FOXA2_FOXJ3	ENST00000380557.4|POLR2M|ENSG00000255529.3|polymerase (RNA) II (DNA directed) polypeptide M
