hg19_v2_chr7_-_131241361_131241398	0.918527	CCAGUGU	ENST00000378555.3|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000322985.9|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000541194.1|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000537928.1|PODXL|ENSG00000128567.12|podocalyxin-like
hg19_v2_chrY_+_15016725_15016769	0.808397	CCAGUGU	ENST00000336079.3|DDX3Y|ENSG00000067048.12|DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
hg19_v2_chr2_-_19558373_19558414	0.567099	CCAGUGU	ENST00000272223.2|OSR1|ENSG00000143867.5|odd-skipped related transciption factor 1
hg19_v2_chr14_+_67999999_68000036	0.513062	CCAGUGU	ENST00000329153.5|PLEKHH1|ENSG00000054690.9|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
hg19_v2_chr14_+_105267250_105267250	0.43941	CCAGUGU	ENST00000342537.7|ZBTB42|ENSG00000179627.9|zinc finger and BTB domain containing 42
hg19_v2_chr3_+_186648274_186648301	0.419662	CCAGUGU	ENST00000169298.3|ST6GAL1|ENSG00000073849.10|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
hg19_v2_chr9_-_3525968_3526016	0.391802	CCAGUGU	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chr18_-_74207146_74207183	0.373635	CCAGUGU	ENST00000443185.2|ZNF516|ENSG00000101493.6|zinc finger protein 516
hg19_v2_chr19_+_45312347_45312378	0.322688	CCAGUGU	ENST00000270233.6|BCAM|ENSG00000187244.6|basal cell adhesion molecule (Lutheran blood group) 	ENST00000591520.1|BCAM|ENSG00000187244.6|basal cell adhesion molecule (Lutheran blood group)
hg19_v2_chr4_+_55524085_55524110	0.318239	CCAGUGU	ENST00000412167.2|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog 	ENST00000288135.5|KIT|ENSG00000157404.11|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog
hg19_v2_chr14_-_91884115_91884127	0.314489	CCAGUGU	ENST00000389857.6|CCDC88C|ENSG00000015133.14|coiled-coil domain containing 88C
hg19_v2_chr11_-_79151695_79151710	0.291928	CCAGUGU	ENST00000278550.7|TENM4|ENSG00000149256.10|teneurin transmembrane protein 4
hg19_v2_chr6_+_17281573_17281605	0.290341	CCAGUGU	ENST00000379052.5|RBM24|ENSG00000112183.10|RNA binding motif protein 24
hg19_v2_chr20_+_48429356_48429458	0.285341	CCAGUGU	ENST00000361573.2|SLC9A8|ENSG00000197818.7|solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 	ENST00000541138.1|SLC9A8|ENSG00000197818.7|solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 	ENST00000539601.1|SLC9A8|ENSG00000197818.7|solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8
hg19_v2_chr3_+_160473996_160474033	0.277319	CCAGUGU	ENST00000498165.1|PPM1L|ENSG00000163590.9|protein phosphatase, Mg2+/Mn2+ dependent, 1L
hg19_v2_chr4_-_23891693_23891706	0.267657	CCAGUGU	ENST00000264867.2|PPARGC1A|ENSG00000109819.4|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha
hg19_v2_chr8_+_37553261_37553282	0.263937	CCAGUGU	ENST00000331569.4|ZNF703|ENSG00000183779.5|zinc finger protein 703
hg19_v2_chr2_+_191273052_191273121	0.259059	CCAGUGU	ENST00000417958.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000432036.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000392328.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6
hg19_v2_chr20_+_19193269_19193294	0.246858	CCAGUGU	ENST00000328041.6|SLC24A3|ENSG00000185052.7|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3
hg19_v2_chr3_-_114790179_114790222	0.240805	CCAGUGU	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr15_-_48470558_48470714	0.239245	CCAGUGU	ENST00000324324.7|MYEF2|ENSG00000104177.13|myelin expression factor 2
hg19_v2_chr10_+_69644404_69644427	0.230382	CCAGUGU	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr9_-_94186131_94186174	0.22435	CCAGUGU	ENST00000297689.3|NFIL3|ENSG00000165030.3|nuclear factor, interleukin 3 regulated
hg19_v2_chr6_+_21593972_21594071	0.223544	CCAGUGU	ENST00000244745.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4 	ENST00000543472.1|SOX4|ENSG00000124766.4|SRY (sex determining region Y)-box 4
hg19_v2_chr1_+_244214577_244214593	0.220826	CCAGUGU	ENST00000358704.4|ZBTB18|ENSG00000179456.9|zinc finger and BTB domain containing 18
hg19_v2_chr2_+_170590321_170590408	0.211681	CCAGUGU	ENST00000392647.2|KLHL23|ENSG00000213160.5|kelch-like family member 23
hg19_v2_chr5_-_59189545_59189625	0.199085	CCAGUGU	ENST00000340635.6|PDE4D|ENSG00000113448.12|phosphodiesterase 4D, cAMP-specific
hg19_v2_chr19_+_58258164_58258201	0.192815	CCAGUGU	ENST00000317178.5|ZNF776|ENSG00000152443.8|zinc finger protein 776
hg19_v2_chr15_-_77363513_77363570	0.1885	CCAGUGU	ENST00000267970.4|TSPAN3|ENSG00000140391.10|tetraspanin 3
hg19_v2_chr7_+_69064300_69064342	0.1864	CCAGUGU	ENST00000342771.4|AUTS2|ENSG00000158321.11|autism susceptibility candidate 2
hg19_v2_chr22_-_46373004_46373016	0.184649	CCAGUGU	ENST00000339464.4|WNT7B|ENSG00000188064.5|wingless-type MMTV integration site family, member 7B
hg19_v2_chr5_+_172483347_172483407	0.182647	CCAGUGU	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr3_-_183273477_183273504	0.182136	CCAGUGU	ENST00000341319.3|KLHL6|ENSG00000172578.7|kelch-like family member 6
hg19_v2_chr10_-_62149433_62149488	0.168512	CCAGUGU	ENST00000280772.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr10_-_14590644_14590669	0.165391	CCAGUGU	ENST00000378470.1|FAM107B|ENSG00000065809.9|family with sequence similarity 107, member B
hg19_v2_chr4_+_184826418_184826522	0.164056	CCAGUGU	ENST00000308497.4|STOX2|ENSG00000173320.5|storkhead box 2 	ENST00000438269.1|STOX2|ENSG00000173320.5|storkhead box 2
hg19_v2_chr19_+_13906250_13906274	0.162218	CCAGUGU	ENST00000254323.2|ZSWIM4|ENSG00000132003.5|zinc finger, SWIM-type containing 4
hg19_v2_chr11_+_121322832_121322912	0.159466	CCAGUGU	ENST00000260197.7|SORL1|ENSG00000137642.8|sortilin-related receptor, L(DLR class) A repeats containing
hg19_v2_chr5_+_98104978_98105010	0.157767	CCAGUGU	ENST00000308234.7|RGMB|ENSG00000174136.7|repulsive guidance molecule family member b
hg19_v2_chr17_+_74261277_74261292	0.15752	CCAGUGU	ENST00000327490.6|UBALD2|ENSG00000185262.7|UBA-like domain containing 2
hg19_v2_chr17_-_16118835_16118867	0.152314	CCAGUGU	ENST00000582357.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000436828.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000411510.1|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1 	ENST00000268712.3|NCOR1|ENSG00000141027.16|nuclear receptor corepressor 1
hg19_v2_chr19_-_58662139_58662182	0.147779	CCAGUGU	ENST00000598312.1|ZNF329|ENSG00000181894.10|zinc finger protein 329
hg19_v2_chr10_+_99496872_99496954	0.141792	CCAGUGU	ENST00000337540.7|ZFYVE27|ENSG00000155256.13|zinc finger, FYVE domain containing 27 	ENST00000357540.4|ZFYVE27|ENSG00000155256.13|zinc finger, FYVE domain containing 27 	ENST00000370613.3|ZFYVE27|ENSG00000155256.13|zinc finger, FYVE domain containing 27 	ENST00000370610.3|ZFYVE27|ENSG00000155256.13|zinc finger, FYVE domain containing 27 	ENST00000393677.4|ZFYVE27|ENSG00000155256.13|zinc finger, FYVE domain containing 27 	ENST00000453958.2|ZFYVE27|ENSG00000155256.13|zinc finger, FYVE domain containing 27 	ENST00000359980.3|ZFYVE27|ENSG00000155256.13|zinc finger, FYVE domain containing 27
hg19_v2_chr7_-_21985489_21985547	0.141452	CCAGUGU	ENST00000356195.5|CDCA7L|ENSG00000164649.15|cell division cycle associated 7-like 	ENST00000447180.1|CDCA7L|ENSG00000164649.15|cell division cycle associated 7-like 	ENST00000373934.4|CDCA7L|ENSG00000164649.15|cell division cycle associated 7-like 	ENST00000457951.1|CDCA7L|ENSG00000164649.15|cell division cycle associated 7-like
hg19_v2_chr6_-_107436473_107436543	0.140595	CCAGUGU	ENST00000369042.1|BEND3|ENSG00000178409.9|BEN domain containing 3
hg19_v2_chr10_-_46030841_46030846	0.13942	CCAGUGU	ENST00000453424.2|MARCH8|ENSG00000165406.11|membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase
hg19_v2_chr2_+_29204161_29204178	0.134488	CCAGUGU	ENST00000379558.4|FAM179A|ENSG00000189350.8|family with sequence similarity 179, member A 	ENST00000403861.2|FAM179A|ENSG00000189350.8|family with sequence similarity 179, member A
hg19_v2_chr1_+_15943995_15944014	0.133782	CCAGUGU	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr8_-_66754172_66754201	0.132174	CCAGUGU	ENST00000401827.3|PDE7A|ENSG00000205268.6|phosphodiesterase 7A
hg19_v2_chr19_-_56092187_56092248	0.131771	CCAGUGU	ENST00000325421.4|ZNF579|ENSG00000218891.2|zinc finger protein 579 	ENST00000592239.1|ZNF579|ENSG00000218891.2|zinc finger protein 579
hg19_v2_chr17_+_55162453_55162594	0.130105	CCAGUGU	ENST00000575322.1|AKAP1|ENSG00000121057.8|A kinase (PRKA) anchor protein 1 	ENST00000337714.3|AKAP1|ENSG00000121057.8|A kinase (PRKA) anchor protein 1 	ENST00000314126.3|AKAP1|ENSG00000121057.8|A kinase (PRKA) anchor protein 1
hg19_v2_chr3_+_88188254_88188254	0.127237	CCAGUGU	ENST00000309495.5|ZNF654|ENSG00000175105.5|zinc finger protein 654
hg19_v2_chr3_-_195270162_195270209	0.126808	CCAGUGU	ENST00000438848.1|PPP1R2|ENSG00000184203.3|protein phosphatase 1, regulatory (inhibitor) subunit 2 	ENST00000328432.3|PPP1R2|ENSG00000184203.3|protein phosphatase 1, regulatory (inhibitor) subunit 2
hg19_v2_chr3_-_9291063_9291136	0.126119	CCAGUGU	ENST00000383836.3|SRGAP3|ENSG00000196220.11|SLIT-ROBO Rho GTPase activating protein 3
hg19_v2_chr11_+_61520075_61520136	0.125416	CCAGUGU	ENST00000278836.5|MYRF|ENSG00000124920.9|myelin regulatory factor
hg19_v2_chr11_+_63706444_63706486	0.123367	CCAGUGU	ENST00000377793.4|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000456907.2|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit 	ENST00000539656.1|NAA40|ENSG00000110583.8|N(alpha)-acetyltransferase 40, NatD catalytic subunit
hg19_v2_chr14_+_75536280_75536321	0.122271	CCAGUGU	ENST00000238686.8|ZC2HC1C|ENSG00000119703.12|zinc finger, C2HC-type containing 1C
hg19_v2_chr4_-_53525406_53525502	0.121549	CCAGUGU	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr13_+_28813645_28813770	0.120829	CCAGUGU	ENST00000282391.5|PAN3|ENSG00000152520.9|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr1_+_218519577_218519594	0.119742	CCAGUGU	ENST00000366930.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2 	ENST00000366929.4|TGFB2|ENSG00000092969.7|transforming growth factor, beta 2
hg19_v2_chr8_-_91997427_91997504	0.119348	CCAGUGU	ENST00000517562.2|RP11-122A3.2|ENSG00000253250.2|chromosome 8 open reading frame 88
hg19_v2_chr9_-_37465396_37465454	0.116113	CCAGUGU	ENST00000307750.4|ZBTB5|ENSG00000168795.4|zinc finger and BTB domain containing 5
hg19_v2_chr16_+_71929397_71929492	0.115968	CCAGUGU	ENST00000537613.1|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast) 	ENST00000424485.2|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast) 	ENST00000606369.1|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast) 	ENST00000329908.8|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast) 	ENST00000538850.1|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast) 	ENST00000541918.1|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast) 	ENST00000534994.1|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast) 	ENST00000378798.5|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast) 	ENST00000539186.1|IST1|ENSG00000182149.16|increased sodium tolerance 1 homolog (yeast)
hg19_v2_chr2_+_109335929_109336002	0.11347	CCAGUGU	ENST00000283195.6|RANBP2|ENSG00000153201.11|RAN binding protein 2
hg19_v2_chr6_-_137113604_137113666	0.113277	CCAGUGU	ENST00000359015.4|MAP3K5|ENSG00000197442.8|mitogen-activated protein kinase kinase kinase 5
hg19_v2_chr1_+_27561007_27561061	0.112099	CCAGUGU	ENST00000319394.3|WDTC1|ENSG00000142784.11|WD and tetratricopeptide repeats 1
hg19_v2_chr9_-_128003606_128003631	0.111271	CCAGUGU	ENST00000324460.6|HSPA5|ENSG00000044574.7|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg19_v2_chr1_-_21671968_21672009	0.110809	CCAGUGU	ENST00000415912.2|ECE1|ENSG00000117298.10|endothelin converting enzyme 1
hg19_v2_chr12_+_104682496_104682651	0.108489	CCAGUGU	ENST00000378070.4|TXNRD1|ENSG00000198431.11|thioredoxin reductase 1
hg19_v2_chr20_+_11871371_11871428	0.107674	CCAGUGU	ENST00000254977.3|BTBD3|ENSG00000132640.10|BTB (POZ) domain containing 3
hg19_v2_chr2_-_213403565_213403584	0.107374	CCAGUGU	ENST00000342788.4|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 	ENST00000436443.1|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4
hg19_v2_chr16_-_30798492_30798535	0.104882	CCAGUGU	ENST00000262525.4|ZNF629|ENSG00000102870.4|zinc finger protein 629
hg19_v2_chr17_-_58603568_58603610	0.10176	CCAGUGU	ENST00000083182.3|APPBP2|ENSG00000062725.5|amyloid beta precursor protein (cytoplasmic tail) binding protein 2
hg19_v2_chr2_-_219433014_219433100	0.10154	CCAGUGU	ENST00000418019.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000454775.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000338465.5|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000415516.1|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37 	ENST00000258399.3|USP37|ENSG00000135913.6|ubiquitin specific peptidase 37
hg19_v2_chr10_-_98346801_98346812	0.101453	CCAGUGU	ENST00000371142.4|TM9SF3|ENSG00000077147.10|transmembrane 9 superfamily member 3
hg19_v2_chr1_+_51701924_51702001	0.10139	CCAGUGU	ENST00000242719.3|RNF11|ENSG00000123091.4|ring finger protein 11
hg19_v2_chr21_+_40177143_40177231	0.0998002	CCAGUGU	ENST00000360214.3|ETS2|ENSG00000157557.7|v-ets avian erythroblastosis virus E26 oncogene homolog 2
hg19_v2_chr11_-_77532050_77532066	0.0995503	CCAGUGU	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr11_+_62104897_62104975	0.0986361	CCAGUGU	ENST00000415229.2|ASRGL1|ENSG00000162174.8|asparaginase like 1 	ENST00000535727.1|ASRGL1|ENSG00000162174.8|asparaginase like 1 	ENST00000301776.5|ASRGL1|ENSG00000162174.8|asparaginase like 1
hg19_v2_chr12_-_48744554_48744733	0.0967261	CCAGUGU	ENST00000544117.2|ZNF641|ENSG00000167528.8|zinc finger protein 641 	ENST00000548932.1|ZNF641|ENSG00000167528.8|zinc finger protein 641 	ENST00000549125.1|ZNF641|ENSG00000167528.8|zinc finger protein 641 	ENST00000301042.3|ZNF641|ENSG00000167528.8|zinc finger protein 641 	ENST00000547026.1|ZNF641|ENSG00000167528.8|zinc finger protein 641
hg19_v2_chr2_-_39664405_39664453	0.0963694	CCAGUGU	ENST00000341681.5|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3 	ENST00000263881.3|MAP4K3|ENSG00000011566.10|mitogen-activated protein kinase kinase kinase kinase 3
hg19_v2_chr14_-_39901618_39901704	0.0944075	CCAGUGU	ENST00000554932.1|FBXO33|ENSG00000165355.7|F-box protein 33 	ENST00000298097.7|FBXO33|ENSG00000165355.7|F-box protein 33
hg19_v2_chr22_-_46933067_46933067	0.0933184	CCAGUGU	ENST00000262738.3|CELSR1|ENSG00000075275.12|cadherin, EGF LAG seven-pass G-type receptor 1 	ENST00000395964.1|CELSR1|ENSG00000075275.12|cadherin, EGF LAG seven-pass G-type receptor 1
hg19_v2_chr16_-_23160591_23160787	0.092949	CCAGUGU	ENST00000219689.7|USP31|ENSG00000103404.10|ubiquitin specific peptidase 31
hg19_v2_chr12_-_9102549_9102591	0.0920666	CCAGUGU	ENST00000000412.3|M6PR|ENSG00000003056.3|mannose-6-phosphate receptor (cation dependent)
hg19_v2_chr8_+_23430157_23430157	0.0916364	CCAGUGU	ENST00000399967.3|FP15737|ENSG00000215298.3|FP15737
hg19_v2_chr6_+_10556215_10556240	0.0914336	CCAGUGU	ENST00000316170.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr2_+_36582857_36583069	0.091111	CCAGUGU	ENST00000280527.2|CRIM1|ENSG00000150938.5|cysteine rich transmembrane BMP regulator 1 (chordin-like)
hg19_v2_chr11_-_102323489_102323576	0.090207	CCAGUGU	ENST00000361236.3|TMEM123|ENSG00000152558.10|transmembrane protein 123
hg19_v2_chr1_-_231473578_231473619	0.088099	CCAGUGU	ENST00000360394.2|EXOC8|ENSG00000116903.6|exocyst complex component 8 	ENST00000366645.1|EXOC8|ENSG00000116903.6|exocyst complex component 8
hg19_v2_chr16_-_50402836_50402930	0.0878673	CCAGUGU	ENST00000394688.3|BRD7|ENSG00000166164.11|bromodomain containing 7
hg19_v2_chr11_-_95522907_95522989	0.0867087	CCAGUGU	ENST00000358780.5|FAM76B|ENSG00000077458.8|family with sequence similarity 76, member B 	ENST00000542135.1|FAM76B|ENSG00000077458.8|family with sequence similarity 76, member B
hg19_v2_chr14_-_36278412_36278437	0.0865439	CCAGUGU	ENST00000389698.3|RALGAPA1|ENSG00000174373.11|Ral GTPase activating protein, alpha subunit 1 (catalytic) 	ENST00000258840.6|RALGAPA1|ENSG00000174373.11|Ral GTPase activating protein, alpha subunit 1 (catalytic)
hg19_v2_chr4_+_95129061_95129198	0.0848551	CCAGUGU	ENST00000354268.4|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr19_+_34745442_34745502	0.0847576	CCAGUGU	ENST00000299505.6|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588470.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000589583.1|KIAA0355|ENSG00000166398.8|KIAA0355 	ENST00000588338.2|KIAA0355|ENSG00000166398.8|KIAA0355
hg19_v2_chr12_+_12870055_12870119	0.0830742	CCAGUGU	ENST00000228872.4|CDKN1B|ENSG00000111276.6|cyclin-dependent kinase inhibitor 1B (p27, Kip1)
hg19_v2_chr19_-_6459746_6459816	0.0830704	CCAGUGU	ENST00000301454.4|SLC25A23|ENSG00000125648.10|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23 	ENST00000334510.5|SLC25A23|ENSG00000125648.10|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
hg19_v2_chr22_+_39853258_39853349	0.0823721	CCAGUGU	ENST00000341184.6|MGAT3|ENSG00000128268.11|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase
hg19_v2_chr9_-_36400213_36400296	0.0817367	CCAGUGU	ENST00000259605.6|RNF38|ENSG00000137075.13|ring finger protein 38 	ENST00000353739.4|RNF38|ENSG00000137075.13|ring finger protein 38
hg19_v2_chr20_+_19867150_19867175	0.0806795	CCAGUGU	ENST00000255006.6|RIN2|ENSG00000132669.8|Ras and Rab interactor 2
hg19_v2_chr17_+_685513_685621	0.0792729	CCAGUGU	ENST00000304478.4|RNMTL1|ENSG00000171861.6|RNA methyltransferase like 1
hg19_v2_chr3_-_189838670_189838718	0.0790532	CCAGUGU	ENST00000319332.5|LEPREL1|ENSG00000090530.5|leprecan-like 1
hg19_v2_chr12_+_102271129_102271164	0.0786254	CCAGUGU	ENST00000258534.8|DRAM1|ENSG00000136048.9|DNA-damage regulated autophagy modulator 1
hg19_v2_chr3_-_125094093_125094198	0.0779274	CCAGUGU	ENST00000484491.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000492394.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000471196.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000468369.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000544464.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000485866.1|ZNF148|ENSG00000163848.14|zinc finger protein 148 	ENST00000360647.4|ZNF148|ENSG00000163848.14|zinc finger protein 148
hg19_v2_chr17_+_53342311_53342400	0.0778163	CCAGUGU	ENST00000226067.5|HLF|ENSG00000108924.9|hepatic leukemia factor
hg19_v2_chr10_+_89264625_89264637	0.0777683	CCAGUGU	ENST00000371996.4|MINPP1|ENSG00000107789.11|multiple inositol-polyphosphate phosphatase 1 	ENST00000371994.4|MINPP1|ENSG00000107789.11|multiple inositol-polyphosphate phosphatase 1
hg19_v2_chr13_-_30424821_30424847	0.0771583	CCAGUGU	ENST00000380680.4|UBL3|ENSG00000122042.9|ubiquitin-like 3
hg19_v2_chr6_-_8435706_8435756	0.0766639	CCAGUGU	ENST00000379660.4|SLC35B3|ENSG00000124786.8|solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3
hg19_v2_chr12_+_11802753_11802834	0.074286	CCAGUGU	ENST00000396373.4|ETV6|ENSG00000139083.6|ets variant 6
hg19_v2_chr7_+_5229819_5229900	0.0741877	CCAGUGU	ENST00000288828.4|WIPI2|ENSG00000157954.10|WD repeat domain, phosphoinositide interacting 2 	ENST00000401525.3|WIPI2|ENSG00000157954.10|WD repeat domain, phosphoinositide interacting 2 	ENST00000404704.3|WIPI2|ENSG00000157954.10|WD repeat domain, phosphoinositide interacting 2
hg19_v2_chr8_+_144679984_144680074	0.0740071	CCAGUGU	ENST00000504548.2|TIGD5|ENSG00000179886.4|tigger transposable element derived 5 	ENST00000321385.3|TIGD5|ENSG00000179886.4|tigger transposable element derived 5
hg19_v2_chr17_-_3749515_3749551	0.0732245	CCAGUGU	ENST00000158149.3|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85 	ENST00000389005.4|C17orf85|ENSG00000074356.12|chromosome 17 open reading frame 85
hg19_v2_chr12_-_14956396_14956474	0.0718976	CCAGUGU	ENST00000535328.1|WBP11|ENSG00000084463.3|WW domain binding protein 11 	ENST00000261167.2|WBP11|ENSG00000084463.3|WW domain binding protein 11
hg19_v2_chr22_-_21213029_21213106	0.0702693	CCAGUGU	ENST00000572273.1|PI4KA|ENSG00000241973.6|phosphatidylinositol 4-kinase, catalytic, alpha 	ENST00000255882.6|PI4KA|ENSG00000241973.6|phosphatidylinositol 4-kinase, catalytic, alpha
hg19_v2_chr4_-_141075330_141075381	0.0697847	CCAGUGU	ENST00000509479.2|MAML3|ENSG00000196782.8|mastermind-like 3 (Drosophila)
hg19_v2_chr6_+_30951487_30951504	0.0679376	CCAGUGU	ENST00000486149.2|MUC21|ENSG00000204544.5|mucin 21, cell surface associated 	ENST00000376296.3|MUC21|ENSG00000204544.5|mucin 21, cell surface associated
hg19_v2_chr3_-_52713729_52713784	0.0659374	CCAGUGU	ENST00000296302.7|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000356770.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000337303.4|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409057.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000410007.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409114.3|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000409767.1|PBRM1|ENSG00000163939.14|polybromo 1 	ENST00000423351.1|PBRM1|ENSG00000163939.14|polybromo 1
hg19_v2_chr15_-_34394119_34394149	0.0649755	CCAGUGU	ENST00000256545.4|EMC7|ENSG00000134153.5|ER membrane protein complex subunit 7
hg19_v2_chr21_-_34144157_34144175	0.0648675	CCAGUGU	ENST00000331923.4|PAXBP1|ENSG00000159086.10|PAX3 and PAX7 binding protein 1
hg19_v2_chr14_-_92572894_92572965	0.0648505	CCAGUGU	ENST00000532032.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000506466.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000555381.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000557311.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000554592.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000554672.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000553491.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000556220.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000502250.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000503767.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000393287.5|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000340660.6|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000545170.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000429774.2|ATXN3|ENSG00000066427.17|ataxin 3
hg19_v2_chr9_-_127952032_127952098	0.0646438	CCAGUGU	ENST00000456642.1|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373546.3|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373547.4|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit
hg19_v2_chr4_-_78740511_78740544	0.0646164	CCAGUGU	ENST00000504123.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000264903.4|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like 	ENST00000515441.1|CNOT6L|ENSG00000138767.8|CCR4-NOT transcription complex, subunit 6-like
hg19_v2_chr4_+_170541660_170541677	0.0639224	CCAGUGU	ENST00000513761.1|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3 	ENST00000347613.4|CLCN3|ENSG00000109572.9|chloride channel, voltage-sensitive 3
hg19_v2_chr10_-_25012597_25012732	0.0638171	CCAGUGU	ENST00000396432.2|ARHGAP21|ENSG00000107863.12|Rho GTPase activating protein 21
hg19_v2_chr12_-_51477333_51477426	0.0636091	CCAGUGU	ENST00000228515.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000548206.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000546935.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2 	ENST00000548981.1|CSRNP2|ENSG00000110925.2|cysteine-serine-rich nuclear protein 2
hg19_v2_chr2_+_148778570_148778589	0.0632256	CCAGUGU	ENST00000407073.1|MBD5|ENSG00000204406.7|methyl-CpG binding domain protein 5
hg19_v2_chr17_-_27621125_27621143	0.0630578	CCAGUGU	ENST00000579665.1|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2 	ENST00000225388.4|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2
hg19_v2_chrX_+_49644470_49644470	0.0630232	CCAGUGU	ENST00000508866.2|USP27X|ENSG00000242013.4|ubiquitin specific peptidase 27, X-linked
hg19_v2_chr17_-_26733179_26733237	0.0624649	CCAGUGU	ENST00000440501.1|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1 	ENST00000321666.5|SLC46A1|ENSG00000076351.8|solute carrier family 46 (folate transporter), member 1
hg19_v2_chr17_+_28804380_28804460	0.0613018	CCAGUGU	ENST00000225724.5|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000451249.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000467337.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000581721.1|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1 	ENST00000414833.2|GOSR1|ENSG00000108587.10|golgi SNAP receptor complex member 1
hg19_v2_chr17_+_45973516_45973618	0.0610996	CCAGUGU	ENST00000376741.4|SP2|ENSG00000167182.11|Sp2 transcription factor
hg19_v2_chr10_-_105615164_105615323	0.0610148	CCAGUGU	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr1_+_100435315_100435345	0.0606867	CCAGUGU	ENST00000370155.3|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 	ENST00000465289.1|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3
hg19_v2_chr1_+_160085501_160085563	0.0606129	CCAGUGU	ENST00000361216.3|ATP1A2|ENSG00000018625.10|ATPase, Na+/K+ transporting, alpha 2 polypeptide
hg19_v2_chr18_+_43753974_43754019	0.0595372	CCAGUGU	ENST00000282059.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25 	ENST00000321319.6|C18orf25|ENSG00000152242.6|chromosome 18 open reading frame 25
hg19_v2_chr5_+_140079919_140080042	0.058245	CCAGUGU	ENST00000274712.3|ZMAT2|ENSG00000146007.6|zinc finger, matrin-type 2
hg19_v2_chr15_+_64680003_64680063	0.0580453	CCAGUGU	ENST00000261884.3|TRIP4|ENSG00000103671.5|thyroid hormone receptor interactor 4
hg19_v2_chr9_+_115249100_115249358	0.0580134	CCAGUGU	ENST00000337530.6|KIAA1958|ENSG00000165185.10|KIAA1958 	ENST00000374244.3|KIAA1958|ENSG00000165185.10|KIAA1958 	ENST00000536272.1|KIAA1958|ENSG00000165185.10|KIAA1958
hg19_v2_chr2_+_64751433_64751472	0.0578529	CCAGUGU	ENST00000238856.4|AFTPH|ENSG00000119844.10|aftiphilin 	ENST00000422803.1|AFTPH|ENSG00000119844.10|aftiphilin 	ENST00000238855.7|AFTPH|ENSG00000119844.10|aftiphilin
hg19_v2_chr1_-_89531041_89531050	0.0568777	CCAGUGU	ENST00000370473.4|GBP1|ENSG00000117228.9|guanylate binding protein 1, interferon-inducible
hg19_v2_chr11_-_66115032_66115163	0.0538772	CCAGUGU	ENST00000311181.4|B3GNT1|ENSG00000174684.6|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
hg19_v2_chr2_+_148602058_148602185	0.0537211	CCAGUGU	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr1_+_33005020_33005077	0.0524604	CCAGUGU	ENST00000373510.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A 	ENST00000316459.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A
hg19_v2_chr3_-_136471204_136471249	0.0523232	CCAGUGU	ENST00000480733.1|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000383202.2|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000236698.5|STAG1|ENSG00000118007.8|stromal antigen 1 	ENST00000434713.2|STAG1|ENSG00000118007.8|stromal antigen 1
hg19_v2_chr1_+_147400506_147400549	0.052141	CCAGUGU	ENST00000314163.7|GPR89B|ENSG00000188092.10|G protein-coupled receptor 89B 	ENST00000468618.2|GPR89B|ENSG00000188092.10|G protein-coupled receptor 89B
hg19_v2_chr1_+_145883868_145883868	0.0519502	CCAGUGU	ENST00000447947.2|GPR89C|ENSG00000196644.8|G protein-coupled receptor 89C
hg19_v2_chr1_+_193091080_193091222	0.0509124	CCAGUGU	ENST00000367435.3|CDC73|ENSG00000134371.9|cell division cycle 73
hg19_v2_chr11_+_9685604_9685706	0.0505402	CCAGUGU	ENST00000447399.2|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit 	ENST00000318950.6|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit
hg19_v2_chr19_-_56135928_56135967	0.0500163	CCAGUGU	ENST00000591479.1|ZNF784|ENSG00000179922.5|zinc finger protein 784 	ENST00000325351.4|ZNF784|ENSG00000179922.5|zinc finger protein 784
hg19_v2_chrX_-_99891796_99891811	0.0493236	CCAGUGU	ENST00000373020.4|TSPAN6|ENSG00000000003.10|tetraspanin 6
hg19_v2_chr22_+_30279144_30279202	0.0488136	CCAGUGU	ENST00000401950.2|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000333027.3|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000445401.1|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000323630.5|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000351488.3|MTMR3|ENSG00000100330.11|myotubularin related protein 3
hg19_v2_chr8_-_71316021_71316068	0.0480861	CCAGUGU	ENST00000452400.2|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chr19_-_12595586_12595643	0.048002	CCAGUGU	ENST00000397732.3|ZNF709|ENSG00000242852.2|zinc finger protein 709
hg19_v2_chr12_+_53574464_53574539	0.0478055	CCAGUGU	ENST00000416904.3|ZNF740|ENSG00000139651.9|zinc finger protein 740
hg19_v2_chr14_-_23388338_23388393	0.0477831	CCAGUGU	ENST00000555209.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000554256.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557403.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557549.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000555676.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557571.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557464.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000554618.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000556862.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000555722.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000346528.5|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000542016.2|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000399922.2|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000557227.1|RBM23|ENSG00000100461.13|RNA binding motif protein 23 	ENST00000359890.3|RBM23|ENSG00000100461.13|RNA binding motif protein 23
hg19_v2_chr22_-_37415475_37415681	0.0464635	CCAGUGU	ENST00000403892.3|TST|ENSG00000128311.9|thiosulfate sulfurtransferase (rhodanese) 	ENST00000249042.3|TST|ENSG00000128311.9|thiosulfate sulfurtransferase (rhodanese) 	ENST00000438203.1|TST|ENSG00000128311.9|thiosulfate sulfurtransferase (rhodanese)
hg19_v2_chr15_-_75135453_75135538	0.0459732	CCAGUGU	ENST00000569437.1|ULK3|ENSG00000140474.8|unc-51 like kinase 3 	ENST00000440863.2|ULK3|ENSG00000140474.8|unc-51 like kinase 3
hg19_v2_chr11_-_65381643_65381767	0.0459002	CCAGUGU	ENST00000309100.3|MAP3K11|ENSG00000173327.3|mitogen-activated protein kinase kinase kinase 11 	ENST00000529839.1|MAP3K11|ENSG00000173327.3|mitogen-activated protein kinase kinase kinase 11 	ENST00000526293.1|MAP3K11|ENSG00000173327.3|mitogen-activated protein kinase kinase kinase 11
hg19_v2_chr19_+_49660997_49661036	0.0454133	CCAGUGU	ENST00000598691.1|TRPM4|ENSG00000130529.11|transient receptor potential cation channel, subfamily M, member 4 	ENST00000252826.5|TRPM4|ENSG00000130529.11|transient receptor potential cation channel, subfamily M, member 4
hg19_v2_chr19_+_12902289_12902310	0.0449326	CCAGUGU	ENST00000302754.4|JUNB|ENSG00000171223.4|jun B proto-oncogene
hg19_v2_chr1_-_145827015_145827103	0.0444371	CCAGUGU	ENST00000534502.1|GPR89A|ENSG00000117262.14|G protein-coupled receptor 89A 	ENST00000313835.9|GPR89A|ENSG00000117262.14|G protein-coupled receptor 89A 	ENST00000454423.3|GPR89A|ENSG00000117262.14|G protein-coupled receptor 89A
hg19_v2_chr3_+_180630090_180630311	0.043877	CCAGUGU	ENST00000357559.4|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1 	ENST00000305586.7|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1
hg19_v2_chr11_+_67250490_67250527	0.0434977	CCAGUGU	ENST00000528641.2|AIP|ENSG00000110711.5|aryl hydrocarbon receptor interacting protein 	ENST00000279146.3|AIP|ENSG00000110711.5|aryl hydrocarbon receptor interacting protein
hg19_v2_chr1_-_153895377_153895465	0.0411751	CCAGUGU	ENST00000368655.4|GATAD2B|ENSG00000143614.7|GATA zinc finger domain containing 2B
hg19_v2_chr22_+_31031639_31031804	0.0401556	CCAGUGU	ENST00000343605.4|SLC35E4|ENSG00000100036.11|solute carrier family 35, member E4 	ENST00000300385.8|SLC35E4|ENSG00000100036.11|solute carrier family 35, member E4
hg19_v2_chr15_+_67813406_67813492	0.0383617	CCAGUGU	ENST00000342683.4|C15orf61|ENSG00000189227.4|chromosome 15 open reading frame 61
hg19_v2_chr3_+_9404526_9404782	0.0382406	CCAGUGU	ENST00000452837.2|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000417036.1|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000419437.1|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000345094.3|THUMPD3|ENSG00000134077.11|THUMP domain containing 3 	ENST00000515662.2|THUMPD3|ENSG00000134077.11|THUMP domain containing 3
hg19_v2_chr1_+_160313062_160313160	0.0377492	CCAGUGU	ENST00000294785.5|NCSTN|ENSG00000162736.11|nicastrin 	ENST00000368063.1|NCSTN|ENSG00000162736.11|nicastrin 	ENST00000437169.1|NCSTN|ENSG00000162736.11|nicastrin
hg19_v2_chr15_+_84322827_84322861	0.0367112	CCAGUGU	ENST00000286744.5|ADAMTSL3|ENSG00000156218.8|ADAMTS-like 3 	ENST00000567476.1|ADAMTSL3|ENSG00000156218.8|ADAMTS-like 3
hg19_v2_chr12_-_56652111_56652183	0.0366451	CCAGUGU	ENST00000267116.7|ANKRD52|ENSG00000139645.9|ankyrin repeat domain 52
hg19_v2_chr12_+_65004292_65004306	0.0364016	CCAGUGU	ENST00000542104.1|RASSF3|ENSG00000153179.7|Ras association (RalGDS/AF-6) domain family member 3 	ENST00000336061.2|RASSF3|ENSG00000153179.7|Ras association (RalGDS/AF-6) domain family member 3
hg19_v2_chr4_+_20702059_20702104	0.035729	CCAGUGU	ENST00000444671.2|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000510700.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000506745.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000514663.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000509469.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000515339.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000513861.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000502374.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000538990.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000511160.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000504630.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000513590.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000514292.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000502938.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000509625.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000505160.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000507634.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000513459.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like 	ENST00000511089.1|PACRGL|ENSG00000163138.14|PARK2 co-regulated-like
hg19_v2_chrX_+_23801280_23801297	0.0354998	CCAGUGU	ENST00000379251.3|SAT1|ENSG00000130066.12|spermidine/spermine N1-acetyltransferase 1 	ENST00000379253.3|SAT1|ENSG00000130066.12|spermidine/spermine N1-acetyltransferase 1 	ENST00000379254.1|SAT1|ENSG00000130066.12|spermidine/spermine N1-acetyltransferase 1 	ENST00000379270.4|SAT1|ENSG00000130066.12|spermidine/spermine N1-acetyltransferase 1
hg19_v2_chr1_+_19923454_19923561	0.0354658	CCAGUGU	ENST00000602662.1|MINOS1-NBL1|ENSG00000270136.1|MINOS1-NBL1 readthrough 	ENST00000322753.6|MINOS1|ENSG00000173436.9|mitochondrial inner membrane organizing system 1 	ENST00000602293.1|MINOS1-NBL1|ENSG00000270136.1|MINOS1-NBL1 readthrough
hg19_v2_chr17_-_62502639_62502849	0.0353722	CCAGUGU	ENST00000225792.5|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000581697.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000584279.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000577922.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5
hg19_v2_chrX_-_30885319_30885319	0.034464	CCAGUGU	ENST00000378933.1|TAB3|ENSG00000157625.11|TGF-beta activated kinase 1/MAP3K7 binding protein 3
hg19_v2_chr11_-_62414070_62414104	0.0341191	CCAGUGU	ENST00000540933.1|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000346178.4|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000356638.3|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000534779.1|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB 	ENST00000525994.1|GANAB|ENSG00000089597.12|glucosidase, alpha; neutral AB
hg19_v2_chr7_-_105517021_105517050	0.0340795	CCAGUGU	ENST00000318724.4|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1 	ENST00000419735.3|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr20_-_62601218_62601291	0.0338141	CCAGUGU	ENST00000369888.1|ZNF512B|ENSG00000196700.3|zinc finger protein 512B
hg19_v2_chr5_-_56247935_56247959	0.0338062	CCAGUGU	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr14_-_50698276_50698304	0.0331903	CCAGUGU	ENST00000216373.5|SOS2|ENSG00000100485.7|son of sevenless homolog 2 (Drosophila)
hg19_v2_chr1_+_38259540_38259569	0.0314489	CCAGUGU	ENST00000397631.3|MANEAL|ENSG00000185090.10|mannosidase, endo-alpha-like
hg19_v2_chr12_+_53774423_53774658	0.0304783	CCAGUGU	ENST00000426431.2|SP1|ENSG00000185591.5|Sp1 transcription factor
hg19_v2_chr8_+_98881268_98881382	0.0304515	CCAGUGU	ENST00000254898.5|MATN2|ENSG00000132561.9|matrilin 2 	ENST00000524308.1|MATN2|ENSG00000132561.9|matrilin 2 	ENST00000522025.2|MATN2|ENSG00000132561.9|matrilin 2
hg19_v2_chr19_-_16682987_16683243	0.0303517	CCAGUGU	ENST00000431408.1|SLC35E1|ENSG00000127526.9|solute carrier family 35, member E1 	ENST00000436553.2|SLC35E1|ENSG00000127526.9|solute carrier family 35, member E1 	ENST00000595753.1|SLC35E1|ENSG00000127526.9|solute carrier family 35, member E1
hg19_v2_chr18_+_60190226_60190314	0.0302818	CCAGUGU	ENST00000269499.5|ZCCHC2|ENSG00000141664.5|zinc finger, CCHC domain containing 2
hg19_v2_chr8_-_102217796_102217960	0.0301251	CCAGUGU	ENST00000519744.1|ZNF706|ENSG00000120963.7|zinc finger protein 706 	ENST00000311212.4|ZNF706|ENSG00000120963.7|zinc finger protein 706 	ENST00000521272.1|ZNF706|ENSG00000120963.7|zinc finger protein 706 	ENST00000519882.1|ZNF706|ENSG00000120963.7|zinc finger protein 706
hg19_v2_chr1_-_147245484_147245494	0.0299613	CCAGUGU	ENST00000271348.2|GJA5|ENSG00000143140.6|gap junction protein, alpha 5, 40kDa
hg19_v2_chr17_-_5389477_5389537	0.0298421	CCAGUGU	ENST00000572834.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000570848.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000571971.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000158771.4|DERL2|ENSG00000072849.6|derlin 2
hg19_v2_chr2_-_11606275_11606289	0.0294258	CCAGUGU	ENST00000381525.3|E2F6|ENSG00000169016.12|E2F transcription factor 6 	ENST00000362009.4|E2F6|ENSG00000169016.12|E2F transcription factor 6
hg19_v2_chr9_+_131445928_131445934	0.0292475	CCAGUGU	ENST00000372692.4|SET|ENSG00000119335.12|SET nuclear oncogene
hg19_v2_chr1_+_36348790_36348822	0.0288171	CCAGUGU	ENST00000373204.4|AGO1|ENSG00000092847.6|argonaute RISC catalytic component 1
hg19_v2_chrX_-_77395186_77395203	0.0285074	CCAGUGU	ENST00000341864.5|TAF9B|ENSG00000187325.4|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa
hg19_v2_chr17_+_35849937_35850006	0.0282905	CCAGUGU	ENST00000394389.4|DUSP14|ENSG00000161326.8|dual specificity phosphatase 14
hg19_v2_chr14_-_91526922_91527001	0.0281375	CCAGUGU	ENST00000418736.2|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5 	ENST00000261991.3|RPS6KA5|ENSG00000100784.5|ribosomal protein S6 kinase, 90kDa, polypeptide 5
hg19_v2_chr19_-_5978090_5978129	0.02781	CCAGUGU	ENST00000592621.1|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000034275.8|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000591092.1|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000591333.1|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000590623.1|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000439268.2|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000587159.1|RANBP3|ENSG00000031823.10|RAN binding protein 3
hg19_v2_chr10_+_97803151_97803348	0.0274115	CCAGUGU	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr5_-_89825328_89825422	0.0271387	CCAGUGU	ENST00000500869.2|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000315948.6|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000509384.1|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3
hg19_v2_chr1_+_162467595_162467655	0.026613	CCAGUGU	ENST00000538489.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1 	ENST00000489294.1|UHMK1|ENSG00000152332.11|U2AF homology motif (UHM) kinase 1
hg19_v2_chr9_-_73029540_73029540	0.0247464	CCAGUGU	ENST00000377126.2|KLF9|ENSG00000119138.3|Kruppel-like factor 9
hg19_v2_chr3_+_38495333_38495422	0.0246037	CCAGUGU	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr11_-_2906979_2907111	0.0245175	CCAGUGU	ENST00000380725.1|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000313407.6|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000430149.2|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000440480.2|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2) 	ENST00000414822.3|CDKN1C|ENSG00000129757.8|cyclin-dependent kinase inhibitor 1C (p57, Kip2)
hg19_v2_chr10_+_111767720_111767752	0.0235946	CCAGUGU	ENST00000356080.4|ADD3|ENSG00000148700.9|adducin 3 (gamma) 	ENST00000277900.8|ADD3|ENSG00000148700.9|adducin 3 (gamma)
hg19_v2_chrX_+_117480036_117480139	0.0226792	CCAGUGU	ENST00000371822.5|WDR44|ENSG00000131725.9|WD repeat domain 44 	ENST00000254029.3|WDR44|ENSG00000131725.9|WD repeat domain 44 	ENST00000371825.3|WDR44|ENSG00000131725.9|WD repeat domain 44
hg19_v2_chr19_+_10654561_10654600	0.0219908	CCAGUGU	ENST00000309469.4|ATG4D|ENSG00000130734.5|autophagy related 4D, cysteine peptidase
hg19_v2_chr19_+_57874835_57874966	0.0219578	CCAGUGU	ENST00000543226.1|TRAPPC2P1|ENSG00000256060.2|trafficking protein particle complex 2 pseudogene 1 	ENST00000282282.3|ZNF547|ENSG00000152433.10|zinc finger protein 547 	ENST00000597658.1|AC003002.4|ENSG00000268133.1|Uncharacterized protein  	ENST00000596755.1|TRAPPC2P1|ENSG00000256060.2|trafficking protein particle complex 2 pseudogene 1
hg19_v2_chr22_+_25960786_25960854	0.0217954	CCAGUGU	ENST00000324198.6|ADRBK2|ENSG00000100077.10|adrenergic, beta, receptor kinase 2
hg19_v2_chr4_+_25314388_25314437	0.0216215	CCAGUGU	ENST00000302874.4|ZCCHC4|ENSG00000168228.10|zinc finger, CCHC domain containing 4
hg19_v2_chr17_+_61086917_61086921	0.0215672	CCAGUGU	ENST00000424789.2|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 	ENST00000389520.4|TANC2|ENSG00000170921.10|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
hg19_v2_chr2_-_201936302_201936416	0.0214854	CCAGUGU	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr17_+_46125707_46125746	0.0210446	CCAGUGU	ENST00000584137.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000362042.3|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000585291.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000357480.5|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1
hg19_v2_chr1_+_19970657_19970796	0.0209751	CCAGUGU	ENST00000375136.3|NBL1|ENSG00000158747.9|neuroblastoma 1, DAN family BMP antagonist
hg19_v2_chr10_+_98592009_98592061	0.0202958	CCAGUGU	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr1_-_156023580_156023605	0.0199023	CCAGUGU	ENST00000368309.3|UBQLN4|ENSG00000160803.7|ubiquilin 4
hg19_v2_chr9_+_116638562_116638606	0.0198356	CCAGUGU	ENST00000374126.5|ZNF618|ENSG00000157657.10|zinc finger protein 618 	ENST00000288466.7|ZNF618|ENSG00000157657.10|zinc finger protein 618
hg19_v2_chr22_-_32146106_32146141	0.0197051	CCAGUGU	ENST00000327423.6|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000397493.2|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000434485.1|PRR14L|ENSG00000183530.9|proline rich 14-like 	ENST00000412743.1|PRR14L|ENSG00000183530.9|proline rich 14-like
hg19_v2_chrX_-_77150985_77151090	0.0194173	CCAGUGU	ENST00000358075.6|MAGT1|ENSG00000102158.15|magnesium transporter 1
hg19_v2_chr1_-_70820357_70820435	0.0185794	CCAGUGU	ENST00000370944.4|ANKRD13C|ENSG00000118454.8|ankyrin repeat domain 13C 	ENST00000262346.6|ANKRD13C|ENSG00000118454.8|ankyrin repeat domain 13C
hg19_v2_chr4_-_40631859_40631889	0.0183784	CCAGUGU	ENST00000295971.7|RBM47|ENSG00000163694.10|RNA binding motif protein 47 	ENST00000319592.4|RBM47|ENSG00000163694.10|RNA binding motif protein 47
hg19_v2_chr5_+_154320623_154320673	0.0177831	CCAGUGU	ENST00000523037.1|MRPL22|ENSG00000082515.12|mitochondrial ribosomal protein L22 	ENST00000265229.8|MRPL22|ENSG00000082515.12|mitochondrial ribosomal protein L22 	ENST00000439747.3|MRPL22|ENSG00000082515.12|mitochondrial ribosomal protein L22 	ENST00000522038.1|MRPL22|ENSG00000082515.12|mitochondrial ribosomal protein L22
hg19_v2_chr8_+_70378852_70378866	0.0177168	CCAGUGU	ENST00000525061.1|SULF1|ENSG00000137573.9|sulfatase 1 	ENST00000458141.2|SULF1|ENSG00000137573.9|sulfatase 1 	ENST00000260128.4|SULF1|ENSG00000137573.9|sulfatase 1
hg19_v2_chr13_+_48877895_48877929	0.0173747	CCAGUGU	ENST00000267163.4|RB1|ENSG00000139687.9|retinoblastoma 1
hg19_v2_chr9_-_111882195_111882255	0.0173207	CCAGUGU	ENST00000374586.3|TMEM245|ENSG00000106771.8|transmembrane protein 245
hg19_v2_chr1_+_222886694_222886742	0.0172619	CCAGUGU	ENST00000426638.1|BROX|ENSG00000162819.7|BRO1 domain and CAAX motif containing 	ENST00000537020.1|BROX|ENSG00000162819.7|BRO1 domain and CAAX motif containing 	ENST00000539697.1|BROX|ENSG00000162819.7|BRO1 domain and CAAX motif containing
hg19_v2_chr10_+_60272814_60272900	0.0171591	CCAGUGU	ENST00000373886.3|BICC1|ENSG00000122870.7|bicaudal C homolog 1 (Drosophila)
hg19_v2_chr5_+_167181917_167181979	0.0166806	CCAGUGU	ENST00000519204.1|TENM2|ENSG00000145934.11|teneurin transmembrane protein 2
hg19_v2_chr3_-_113415441_113415500	0.0166246	CCAGUGU	ENST00000491165.1|KIAA2018|ENSG00000176542.5|KIAA2018 	ENST00000316407.4|KIAA2018|ENSG00000176542.5|KIAA2018
hg19_v2_chr16_+_31044812_31044931	0.0164775	CCAGUGU	ENST00000313843.3|STX4|ENSG00000103496.10|syntaxin 4
hg19_v2_chr3_-_156877997_156878004	0.0162663	CCAGUGU	ENST00000295926.3|CCNL1|ENSG00000163660.7|cyclin L1
hg19_v2_chr16_-_67840442_67840555	0.01608	CCAGUGU	ENST00000536251.1|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000448631.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000602677.1|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000411657.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000425512.2|RANBP10|ENSG00000141084.6|RAN binding protein 10 	ENST00000317506.3|RANBP10|ENSG00000141084.6|RAN binding protein 10
hg19_v2_chr6_+_44094627_44094662	0.0158519	CCAGUGU	ENST00000259746.9|TMEM63B|ENSG00000137216.14|transmembrane protein 63B
hg19_v2_chr2_-_101767715_101767881	0.0151171	CCAGUGU	ENST00000376840.4|TBC1D8|ENSG00000204634.8|TBC1 domain family, member 8 (with GRAM domain) 	ENST00000409318.1|TBC1D8|ENSG00000204634.8|TBC1 domain family, member 8 (with GRAM domain)
hg19_v2_chr18_+_32558208_32558340	0.0148997	CCAGUGU	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr19_-_12662240_12662310	0.0147772	CCAGUGU	ENST00000416136.1|ZNF564|ENSG00000249709.3|zinc finger protein 564 	ENST00000428311.1|ZNF709|ENSG00000196826.7|ZNF709
hg19_v2_chr12_-_92539614_92539673	0.0147451	CCAGUGU	ENST00000256015.3|BTG1|ENSG00000133639.3|B-cell translocation gene 1, anti-proliferative
hg19_v2_chr7_+_140774032_140774032	0.0147008	CCAGUGU	ENST00000565468.1|TMEM178B|ENSG00000261115.1|transmembrane protein 178B
hg19_v2_chr6_-_146135880_146135952	0.0139944	CCAGUGU	ENST00000237281.4|FBXO30|ENSG00000118496.4|F-box protein 30
hg19_v2_chr16_+_77224732_77224887	0.0137741	CCAGUGU	ENST00000569610.1|MON1B|ENSG00000103111.10|MON1 secretory trafficking family member B 	ENST00000248248.3|MON1B|ENSG00000103111.10|MON1 secretory trafficking family member B 	ENST00000567291.1|MON1B|ENSG00000103111.10|MON1 secretory trafficking family member B 	ENST00000320859.6|MON1B|ENSG00000103111.10|MON1 secretory trafficking family member B 	ENST00000563612.1|MON1B|ENSG00000103111.10|MON1 secretory trafficking family member B 	ENST00000563279.1|MON1B|ENSG00000103111.10|MON1 secretory trafficking family member B
hg19_v2_chr1_+_89149905_89149995	0.0135563	CCAGUGU	ENST00000316005.7|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370521.3|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370505.3|PKN2|ENSG00000065243.14|protein kinase N2
hg19_v2_chr17_-_27916621_27916680	0.012593	CCAGUGU	ENST00000225394.3|GIT1|ENSG00000108262.11|G protein-coupled receptor kinase interacting ArfGAP 1
hg19_v2_chr15_-_65809581_65809617	0.0124365	CCAGUGU	ENST00000341861.5|DPP8|ENSG00000074603.14|dipeptidyl-peptidase 8
hg19_v2_chr11_-_57298187_57298276	0.012266	CCAGUGU	ENST00000525158.1|TIMM10|ENSG00000134809.4|translocase of inner mitochondrial membrane 10 homolog (yeast) 	ENST00000257245.4|TIMM10|ENSG00000134809.4|translocase of inner mitochondrial membrane 10 homolog (yeast) 	ENST00000525587.1|TIMM10|ENSG00000134809.4|translocase of inner mitochondrial membrane 10 homolog (yeast)
hg19_v2_chr11_-_92931098_92931173	0.011438	CCAGUGU	ENST00000326402.4|SLC36A4|ENSG00000180773.10|solute carrier family 36 (proton/amino acid symporter), member 4
hg19_v2_chr2_-_242212227_242212301	0.0111059	CCAGUGU	ENST00000427007.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000458564.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000452065.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000427183.2|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000426343.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000422080.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000449504.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000449864.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein 	ENST00000391975.1|HDLBP|ENSG00000115677.12|high density lipoprotein binding protein
hg19_v2_chr8_+_30241995_30242045	0.0110377	CCAGUGU	ENST00000397323.4|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing 	ENST00000339877.4|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing 	ENST00000320203.4|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing 	ENST00000287771.5|RBPMS|ENSG00000157110.11|RNA binding protein with multiple splicing
hg19_v2_chr10_+_102295616_102295713	0.0106483	CCAGUGU	ENST00000299163.6|HIF1AN|ENSG00000166135.9|hypoxia inducible factor 1, alpha subunit inhibitor
hg19_v2_chr10_-_88281494_88281572	0.0101619	CCAGUGU	ENST00000298767.5|WAPAL|ENSG00000062650.13|wings apart-like homolog (Drosophila)
hg19_v2_chr12_+_109535373_109535414	0.0100451	CCAGUGU	ENST00000242576.2|UNG|ENSG00000076248.6|uracil-DNA glycosylase
hg19_v2_chr2_+_70485220_70485293	0.00900743	CCAGUGU	ENST00000433351.2|PCYOX1|ENSG00000116005.7|prenylcysteine oxidase 1 	ENST00000264441.5|PCYOX1|ENSG00000116005.7|prenylcysteine oxidase 1
hg19_v2_chr17_+_57697216_57697235	0.00886965	CCAGUGU	ENST00000393043.1|CLTC|ENSG00000141367.7|clathrin, heavy chain (Hc) 	ENST00000269122.3|CLTC|ENSG00000141367.7|clathrin, heavy chain (Hc)
hg19_v2_chr17_+_37026106_37026123	0.00808357	CCAGUGU	ENST00000318008.6|LASP1|ENSG00000002834.13|LIM and SH3 protein 1
hg19_v2_chr14_-_55878538_55878576	0.00779887	CCAGUGU	ENST00000247178.5|ATG14|ENSG00000126775.8|autophagy related 14
hg19_v2_chr11_+_120207787_120207962	0.0070255	CCAGUGU	ENST00000397843.2|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12 	ENST00000356641.3|ARHGEF12|ENSG00000196914.4|Rho guanine nucleotide exchange factor (GEF) 12
hg19_v2_chr12_+_52345448_52345532	0.0057588	CCAGUGU	ENST00000257963.4|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000541224.1|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000426655.2|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000536420.1|ACVR1B|ENSG00000135503.8|activin A receptor, type IB 	ENST00000415850.2|ACVR1B|ENSG00000135503.8|activin A receptor, type IB
hg19_v2_chr6_+_72596604_72596727	0.0051873	CCAGUGU	ENST00000348717.5|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000517960.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000518273.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000522291.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000521978.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000520567.1|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1 	ENST00000264839.7|RIMS1|ENSG00000079841.14|regulating synaptic membrane exocytosis 1
hg19_v2_chr2_+_157291953_157292003	0.00515266	CCAGUGU	ENST00000310454.6|GPD2|ENSG00000115159.11|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
hg19_v2_chr11_-_27528301_27528336	0.00491349	CCAGUGU	ENST00000524596.1|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans) 	ENST00000278193.2|LIN7C|ENSG00000148943.7|lin-7 homolog C (C. elegans)
hg19_v2_chr5_-_176778523_176778684	0.00446028	CCAGUGU	ENST00000513877.1|LMAN2|ENSG00000169223.10|lectin, mannose-binding 2 	ENST00000515209.1|LMAN2|ENSG00000169223.10|lectin, mannose-binding 2 	ENST00000514458.1|LMAN2|ENSG00000169223.10|lectin, mannose-binding 2 	ENST00000502560.1|LMAN2|ENSG00000169223.10|lectin, mannose-binding 2
hg19_v2_chr15_+_85923856_85923987	0.00376455	CCAGUGU	ENST00000560302.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000394518.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000361243.2|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13 	ENST00000560256.1|AKAP13|ENSG00000170776.15|A kinase (PRKA) anchor protein 13
hg19_v2_chr6_-_116601044_116601106	0.0027122	CCAGUGU	ENST00000368608.3|TSPYL1|ENSG00000189241.6|TSPY-like 1
hg19_v2_chr3_-_15106747_15106842	0.0025963	CCAGUGU	ENST00000449354.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25 	ENST00000444840.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25 	ENST00000253686.2|MRPS25|ENSG00000131368.3|mitochondrial ribosomal protein S25
hg19_v2_chr1_-_115212696_115212732	0.00167809	CCAGUGU	ENST00000393276.3|DENND2C|ENSG00000175984.10|DENN/MADD domain containing 2C 	ENST00000393277.1|DENND2C|ENSG00000175984.10|DENN/MADD domain containing 2C
hg19_v2_chr20_-_4804244_4804293	0.00146399	CCAGUGU	ENST00000379400.3|RASSF2|ENSG00000101265.11|Ras association (RalGDS/AF-6) domain family member 2
hg19_v2_chr9_+_37422663_37422743	0.00119358	CCAGUGU	ENST00000318158.6|GRHPR|ENSG00000137106.13|glyoxylate reductase/hydroxypyruvate reductase 	ENST00000607784.1|GRHPR|ENSG00000137106.13|glyoxylate reductase/hydroxypyruvate reductase
hg19_v2_chrX_-_103087136_103087209	0.000248162	CCAGUGU	ENST00000243298.2|RAB9B|ENSG00000123570.3|RAB9B, member RAS oncogene family
