hg19_v2_chr14_+_67999999_68000036	0.581504	CAGUAGU	ENST00000329153.5|PLEKHH1|ENSG00000054690.9|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
hg19_v2_chrX_-_8700171_8700227	0.571859	CAGUAGU	ENST00000262648.3|KAL1|ENSG00000011201.6|Kallmann syndrome 1 sequence
hg19_v2_chr5_+_75699040_75699090	0.536082	CAGUAGU	ENST00000274364.6|IQGAP2|ENSG00000145703.11|IQ motif containing GTPase activating protein 2
hg19_v2_chr5_-_121413974_121413986	0.488319	CAGUAGU	ENST00000231004.4|LOX|ENSG00000113083.8|lysyl oxidase
hg19_v2_chr16_+_58549378_58549392	0.445117	CAGUAGU	ENST00000310682.2|SETD6|ENSG00000103037.7|SET domain containing 6 	ENST00000394266.4|SETD6|ENSG00000103037.7|SET domain containing 6 	ENST00000219315.4|SETD6|ENSG00000103037.7|SET domain containing 6
hg19_v2_chrX_+_16964794_16964861	0.431631	CAGUAGU	ENST00000357277.3|REPS2|ENSG00000169891.13|RALBP1 associated Eps domain containing 2
hg19_v2_chr1_+_244214577_244214593	0.412849	CAGUAGU	ENST00000358704.4|ZBTB18|ENSG00000179456.9|zinc finger and BTB domain containing 18
hg19_v2_chr12_-_56652111_56652183	0.412448	CAGUAGU	ENST00000267116.7|ANKRD52|ENSG00000139645.9|ankyrin repeat domain 52
hg19_v2_chr1_+_61547894_61547980	0.391614	CAGUAGU	ENST00000403491.3|NFIA|ENSG00000162599.11|nuclear factor I/A
hg19_v2_chr1_-_57045228_57045242	0.37759	CAGUAGU	ENST00000371250.3|PPAP2B|ENSG00000162407.8|phosphatidic acid phosphatase type 2B
hg19_v2_chr9_-_3525968_3526016	0.348112	CAGUAGU	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chr15_-_77363513_77363570	0.32964	CAGUAGU	ENST00000267970.4|TSPAN3|ENSG00000140391.10|tetraspanin 3
hg19_v2_chr20_-_4982132_4982164	0.320524	CAGUAGU	ENST00000338244.1|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2 	ENST00000424750.2|SLC23A2|ENSG00000089057.10|solute carrier family 23 (ascorbic acid transporter), member 2
hg19_v2_chr8_-_130951940_130952118	0.300864	CAGUAGU	ENST00000522250.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000522941.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000522746.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000520204.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000519070.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000520254.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000519824.2|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B 	ENST00000519540.1|FAM49B|ENSG00000153310.14|family with sequence similarity 49, member B
hg19_v2_chr4_+_26862400_26862416	0.293372	CAGUAGU	ENST00000467011.1|STIM2|ENSG00000109689.10|stromal interaction molecule 2 	ENST00000412829.2|STIM2|ENSG00000109689.10|stromal interaction molecule 2
hg19_v2_chr3_+_61547585_61547585	0.280571	CAGUAGU	ENST00000295874.10|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G 	ENST00000474889.1|PTPRG|ENSG00000144724.14|protein tyrosine phosphatase, receptor type, G
hg19_v2_chr3_-_114790179_114790222	0.276136	CAGUAGU	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr13_-_86373536_86373623	0.274069	CAGUAGU	ENST00000400286.2|SLITRK6|ENSG00000184564.8|SLIT and NTRK-like family, member 6
hg19_v2_chr11_-_110583451_110583451	0.268742	CAGUAGU	ENST00000260283.4|ARHGAP20|ENSG00000137727.8|Rho GTPase activating protein 20 	ENST00000528829.1|ARHGAP20|ENSG00000137727.8|Rho GTPase activating protein 20
hg19_v2_chr8_+_123793633_123793703	0.252713	CAGUAGU	ENST00000314393.4|ZHX2|ENSG00000178764.6|zinc fingers and homeoboxes 2
hg19_v2_chr10_+_115803650_115803806	0.252276	CAGUAGU	ENST00000369295.2|ADRB1|ENSG00000043591.4|adrenoceptor beta 1
hg19_v2_chr14_-_53619816_53620056	0.237799	CAGUAGU	ENST00000323669.5|DDHD1|ENSG00000100523.10|DDHD domain containing 1 	ENST00000395606.1|DDHD1|ENSG00000100523.10|DDHD domain containing 1 	ENST00000357758.3|DDHD1|ENSG00000100523.10|DDHD domain containing 1
hg19_v2_chr8_+_81397876_81397902	0.233568	CAGUAGU	ENST00000430430.1|ZBTB10|ENSG00000205189.7|zinc finger and BTB domain containing 10
hg19_v2_chr7_-_95064264_95064510	0.228068	CAGUAGU	ENST00000536183.1|PON2|ENSG00000105854.8|paraoxonase 2 	ENST00000433091.2|PON2|ENSG00000105854.8|paraoxonase 2 	ENST00000222572.3|PON2|ENSG00000105854.8|paraoxonase 2
hg19_v2_chr22_+_25960786_25960854	0.222967	CAGUAGU	ENST00000324198.6|ADRBK2|ENSG00000100077.10|adrenergic, beta, receptor kinase 2
hg19_v2_chr5_-_100238956_100238994	0.221574	CAGUAGU	ENST00000231461.5|ST8SIA4|ENSG00000113532.8|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg19_v2_chr2_-_213403565_213403584	0.211256	CAGUAGU	ENST00000342788.4|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 	ENST00000436443.1|ERBB4|ENSG00000178568.9|v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4
hg19_v2_chrX_+_44732757_44732860	0.203526	CAGUAGU	ENST00000377967.4|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000536777.1|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000382899.4|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A 	ENST00000543216.1|KDM6A|ENSG00000147050.10|lysine (K)-specific demethylase 6A
hg19_v2_chr10_+_60144782_60144887	0.199556	CAGUAGU	ENST00000487519.1|TFAM|ENSG00000108064.6|transcription factor A, mitochondrial
hg19_v2_chr14_+_56046914_56046973	0.196283	CAGUAGU	ENST00000413890.2|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor) 	ENST00000395309.3|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor) 	ENST00000554567.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor) 	ENST00000555498.1|KTN1|ENSG00000126777.13|kinectin 1 (kinesin receptor)
hg19_v2_chr6_+_1312675_1312701	0.193976	CAGUAGU	ENST00000296839.2|FOXQ1|ENSG00000164379.4|forkhead box Q1
hg19_v2_chr13_-_30169807_30169839	0.19105	CAGUAGU	ENST00000380752.5|SLC7A1|ENSG00000139514.8|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
hg19_v2_chr2_+_198570081_198570142	0.189428	CAGUAGU	ENST00000282276.6|MARS2|ENSG00000247626.3|methionyl-tRNA synthetase 2, mitochondrial
hg19_v2_chr11_-_94964354_94964374	0.186009	CAGUAGU	ENST00000536441.1|SESN3|ENSG00000149212.6|sestrin 3
hg19_v2_chr2_+_46524537_46524553	0.181725	CAGUAGU	ENST00000263734.3|EPAS1|ENSG00000116016.9|endothelial PAS domain protein 1
hg19_v2_chr10_-_28571015_28571067	0.17907	CAGUAGU	ENST00000375719.3|MPP7|ENSG00000150054.14|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) 	ENST00000375732.1|MPP7|ENSG00000150054.14|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)
hg19_v2_chr16_-_71758602_71758604	0.177161	CAGUAGU	ENST00000568954.1|PHLPP2|ENSG00000040199.14|PH domain and leucine rich repeat protein phosphatase 2
hg19_v2_chr16_+_67880574_67880635	0.175412	CAGUAGU	ENST00000219169.4|NUTF2|ENSG00000102898.7|nuclear transport factor 2
hg19_v2_chrX_+_40944871_40944888	0.17304	CAGUAGU	ENST00000378308.2|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked 	ENST00000324545.8|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked
hg19_v2_chr10_+_11206925_11206993	0.165334	CAGUAGU	ENST00000354440.2|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000315874.4|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000427450.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr3_-_11762202_11762226	0.163993	CAGUAGU	ENST00000445411.1|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila) 	ENST00000404339.1|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila) 	ENST00000273038.3|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila)
hg19_v2_chrX_+_16804544_16804613	0.161033	CAGUAGU	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chr5_-_172756506_172756574	0.160481	CAGUAGU	ENST00000265087.4|STC2|ENSG00000113739.6|stanniocalcin 2
hg19_v2_chr2_+_27440229_27440280	0.15868	CAGUAGU	ENST00000264705.4|CAD|ENSG00000084774.9|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase 	ENST00000403525.1|CAD|ENSG00000084774.9|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase
hg19_v2_chr6_-_139695757_139695795	0.157785	CAGUAGU	ENST00000367651.2|CITED2|ENSG00000164442.8|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2
hg19_v2_chr5_+_139027877_139027918	0.151708	CAGUAGU	ENST00000302517.3|CXXC5|ENSG00000171604.7|CXXC finger protein 5
hg19_v2_chr5_-_693500_693511	0.150511	CAGUAGU	ENST00000360578.5|TPPP|ENSG00000171368.10|tubulin polymerization promoting protein
hg19_v2_chr10_-_89577910_89578010	0.149362	CAGUAGU	ENST00000308448.7|ATAD1|ENSG00000138138.9|ATPase family, AAA domain containing 1 	ENST00000541004.1|ATAD1|ENSG00000138138.9|ATPase family, AAA domain containing 1
hg19_v2_chr5_+_139175380_139175431	0.14869	CAGUAGU	ENST00000274710.3|PSD2|ENSG00000146005.3|pleckstrin and Sec7 domain containing 2
hg19_v2_chr1_+_29563011_29563151	0.146698	CAGUAGU	ENST00000345512.3|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000373779.3|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000356870.3|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000323874.8|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000428026.2|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U 	ENST00000460170.2|PTPRU|ENSG00000060656.15|protein tyrosine phosphatase, receptor type, U
hg19_v2_chr2_+_179345173_179345221	0.146376	CAGUAGU	ENST00000234453.5|PLEKHA3|ENSG00000116095.6|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
hg19_v2_chr2_+_191273052_191273121	0.143812	CAGUAGU	ENST00000417958.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000432036.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000392328.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6
hg19_v2_chr12_-_48099773_48099844	0.134115	CAGUAGU	ENST00000432584.3|RPAP3|ENSG00000005175.5|RNA polymerase II associated protein 3 	ENST00000005386.3|RPAP3|ENSG00000005175.5|RNA polymerase II associated protein 3
hg19_v2_chrX_-_130037198_130037234	0.131552	CAGUAGU	ENST00000370935.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000338144.3|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000394363.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2
hg19_v2_chr8_+_37553261_37553282	0.129534	CAGUAGU	ENST00000331569.4|ZNF703|ENSG00000183779.5|zinc finger protein 703
hg19_v2_chr2_-_24149977_24150007	0.129506	CAGUAGU	ENST00000238789.5|ATAD2B|ENSG00000119778.10|ATPase family, AAA domain containing 2B
hg19_v2_chr10_-_13570533_13570533	0.124389	CAGUAGU	ENST00000396900.2|BEND7|ENSG00000165626.12|BEN domain containing 7 	ENST00000396898.2|BEND7|ENSG00000165626.12|BEN domain containing 7
hg19_v2_chr2_+_45878790_45878913	0.120557	CAGUAGU	ENST00000306156.3|PRKCE|ENSG00000171132.9|protein kinase C, epsilon
hg19_v2_chr3_-_167813672_167813763	0.120174	CAGUAGU	ENST00000470487.1|GOLIM4|ENSG00000173905.4|golgi integral membrane protein 4
hg19_v2_chr4_+_103790120_103790186	0.119087	CAGUAGU	ENST00000273986.4|CISD2|ENSG00000145354.5|CDGSH iron sulfur domain 2
hg19_v2_chr2_+_42396472_42396563	0.114587	CAGUAGU	ENST00000318522.5|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4 	ENST00000402711.2|EML4|ENSG00000143924.14|echinoderm microtubule associated protein like 4
hg19_v2_chr14_+_23067146_23067160	0.111365	CAGUAGU	ENST00000428304.2|ABHD4|ENSG00000100439.6|abhydrolase domain containing 4
hg19_v2_chr17_+_30264014_30264086	0.111327	CAGUAGU	ENST00000322652.5|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit 	ENST00000580398.1|SUZ12|ENSG00000178691.6|SUZ12 polycomb repressive complex 2 subunit
hg19_v2_chr15_-_49338748_49338765	0.10581	CAGUAGU	ENST00000559471.1|SECISBP2L|ENSG00000138593.4|SECIS binding protein 2-like
hg19_v2_chr12_-_96794143_96794264	0.105526	CAGUAGU	ENST00000543119.2|CDK17|ENSG00000059758.3|cyclin-dependent kinase 17
hg19_v2_chr4_-_40631859_40631889	0.10441	CAGUAGU	ENST00000295971.7|RBM47|ENSG00000163694.10|RNA binding motif protein 47 	ENST00000319592.4|RBM47|ENSG00000163694.10|RNA binding motif protein 47
hg19_v2_chr3_+_137906109_137906153	0.101656	CAGUAGU	ENST00000481646.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000469044.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000491704.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8 	ENST00000461600.1|ARMC8|ENSG00000114098.13|armadillo repeat containing 8
hg19_v2_chr12_+_53574464_53574539	0.100145	CAGUAGU	ENST00000416904.3|ZNF740|ENSG00000139651.9|zinc finger protein 740
hg19_v2_chr15_-_61521495_61521518	0.0992071	CAGUAGU	ENST00000335670.6|RORA|ENSG00000069667.11|RAR-related orphan receptor A
hg19_v2_chr7_-_2883928_2883993	0.0984463	CAGUAGU	ENST00000275364.3|GNA12|ENSG00000146535.9|guanine nucleotide binding protein (G protein) alpha 12
hg19_v2_chr3_-_171178157_171178225	0.095299	CAGUAGU	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr1_-_205180664_205180727	0.0944556	CAGUAGU	ENST00000367161.3|DSTYK|ENSG00000133059.12|dual serine/threonine and tyrosine protein kinase 	ENST00000367162.3|DSTYK|ENSG00000133059.12|dual serine/threonine and tyrosine protein kinase 	ENST00000367160.4|DSTYK|ENSG00000133059.12|dual serine/threonine and tyrosine protein kinase
hg19_v2_chr12_+_56401268_56401443	0.08841	CAGUAGU	ENST00000262032.5|IKZF4|ENSG00000123411.10|IKAROS family zinc finger 4 (Eos)
hg19_v2_chr3_-_52931557_52931623	0.0859582	CAGUAGU	ENST00000504329.1|TMEM110-MUSTN1|ENSG00000248592.3|TMEM110-MUSTN1 readthrough 	ENST00000355083.5|TMEM110|ENSG00000213533.7|transmembrane protein 110
hg19_v2_chr2_+_148602058_148602185	0.0838966	CAGUAGU	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr1_+_15943995_15944014	0.0812282	CAGUAGU	ENST00000480945.1|DDI2|ENSG00000197312.7|DNA-damage inducible 1 homolog 2 (S. cerevisiae)
hg19_v2_chr4_+_123747834_123747863	0.0804878	CAGUAGU	ENST00000264498.3|FGF2|ENSG00000138685.8|fibroblast growth factor 2 (basic)
hg19_v2_chr15_-_37390482_37390572	0.0803563	CAGUAGU	ENST00000559085.1|MEIS2|ENSG00000134138.15|Meis homeobox 2 	ENST00000397624.3|MEIS2|ENSG00000134138.15|Meis homeobox 2
hg19_v2_chr11_+_33278811_33279133	0.0796389	CAGUAGU	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr5_+_141348598_141348626	0.0790599	CAGUAGU	ENST00000394520.2|RNF14|ENSG00000013561.13|ring finger protein 14 	ENST00000347642.3|RNF14|ENSG00000013561.13|ring finger protein 14
hg19_v2_chr15_+_33010175_33010211	0.0777092	CAGUAGU	ENST00000300177.4|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist 	ENST00000560677.1|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist 	ENST00000560830.1|GREM1|ENSG00000166923.6|gremlin 1, DAN family BMP antagonist
hg19_v2_chr1_-_211752073_211752084	0.0764737	CAGUAGU	ENST00000367001.4|SLC30A1|ENSG00000170385.9|solute carrier family 30 (zinc transporter), member 1
hg19_v2_chr17_+_36861735_36861795	0.0762099	CAGUAGU	ENST00000378137.5|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 	ENST00000325718.7|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg19_v2_chr15_-_34502278_34502318	0.0760385	CAGUAGU	ENST00000559515.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000256544.3|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000560108.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000559462.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1
hg19_v2_chr6_+_136172820_136172846	0.0746576	CAGUAGU	ENST00000308191.6|PDE7B|ENSG00000171408.9|phosphodiesterase 7B
hg19_v2_chr5_+_173315283_173315335	0.074626	CAGUAGU	ENST00000265085.5|CPEB4|ENSG00000113742.8|cytoplasmic polyadenylation element binding protein 4
hg19_v2_chr1_+_2985760_2985775	0.074485	CAGUAGU	ENST00000378391.2|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000514189.1|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000270722.5|PRDM16|ENSG00000142611.12|PR domain containing 16
hg19_v2_chr2_+_36582857_36583069	0.0735893	CAGUAGU	ENST00000280527.2|CRIM1|ENSG00000150938.5|cysteine rich transmembrane BMP regulator 1 (chordin-like)
hg19_v2_chr1_-_235491462_235491534	0.0733586	CAGUAGU	ENST00000418304.1|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000264183.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like) 	ENST00000349213.3|ARID4B|ENSG00000054267.16|AT rich interactive domain 4B (RBP1-like)
hg19_v2_chr1_-_46152174_46152302	0.0717814	CAGUAGU	ENST00000290795.3|GPBP1L1|ENSG00000159592.6|GC-rich promoter binding protein 1-like 1 	ENST00000355105.3|GPBP1L1|ENSG00000159592.6|GC-rich promoter binding protein 1-like 1
hg19_v2_chr17_+_73521763_73521870	0.0706013	CAGUAGU	ENST00000167462.5|LLGL2|ENSG00000073350.9|lethal giant larvae homolog 2 (Drosophila) 	ENST00000375227.4|LLGL2|ENSG00000073350.9|lethal giant larvae homolog 2 (Drosophila) 	ENST00000392550.3|LLGL2|ENSG00000073350.9|lethal giant larvae homolog 2 (Drosophila) 	ENST00000578363.1|LLGL2|ENSG00000073350.9|lethal giant larvae homolog 2 (Drosophila) 	ENST00000579392.1|LLGL2|ENSG00000073350.9|lethal giant larvae homolog 2 (Drosophila)
hg19_v2_chr20_+_33814457_33814506	0.0683864	CAGUAGU	ENST00000246186.6|MMP24|ENSG00000125966.8|matrix metallopeptidase 24 (membrane-inserted)
hg19_v2_chr6_+_10556215_10556240	0.0657925	CAGUAGU	ENST00000316170.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr10_+_20105157_20105184	0.0648097	CAGUAGU	ENST00000377242.3|PLXDC2|ENSG00000120594.12|plexin domain containing 2 	ENST00000377252.4|PLXDC2|ENSG00000120594.12|plexin domain containing 2
hg19_v2_chrX_-_83442915_83442985	0.0647938	CAGUAGU	ENST00000262752.2|RPS6KA6|ENSG00000072133.6|ribosomal protein S6 kinase, 90kDa, polypeptide 6 	ENST00000543399.1|RPS6KA6|ENSG00000072133.6|ribosomal protein S6 kinase, 90kDa, polypeptide 6
hg19_v2_chr3_+_122513642_122513664	0.0633774	CAGUAGU	ENST00000261038.5|DIRC2|ENSG00000138463.8|disrupted in renal carcinoma 2
hg19_v2_chr9_+_129089088_129089163	0.0629314	CAGUAGU	ENST00000361171.3|MVB12B|ENSG00000196814.10|multivesicular body subunit 12B 	ENST00000545391.1|MVB12B|ENSG00000196814.10|multivesicular body subunit 12B
hg19_v2_chr12_-_46662772_46662835	0.0622894	CAGUAGU	ENST00000549049.1|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1 	ENST00000439706.1|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1 	ENST00000398637.5|SLC38A1|ENSG00000111371.11|solute carrier family 38, member 1
hg19_v2_chr21_-_36260980_36261011	0.0615181	CAGUAGU	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr10_+_92980517_92980550	0.0614398	CAGUAGU	ENST00000336126.5|PCGF5|ENSG00000180628.10|polycomb group ring finger 5
hg19_v2_chr17_+_38219063_38219154	0.0611586	CAGUAGU	ENST00000584985.1|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000264637.4|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000450525.2|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha
hg19_v2_chr12_-_56583332_56583369	0.0609681	CAGUAGU	ENST00000347471.4|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 	ENST00000267064.4|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 	ENST00000394023.3|SMARCC2|ENSG00000139613.7|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
hg19_v2_chr8_+_125551338_125551425	0.060636	CAGUAGU	ENST00000276689.3|NDUFB9|ENSG00000147684.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa 	ENST00000518008.1|NDUFB9|ENSG00000147684.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa 	ENST00000522532.1|NDUFB9|ENSG00000147684.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa 	ENST00000517367.1|NDUFB9|ENSG00000147684.3|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa
hg19_v2_chr13_+_48877895_48877929	0.0591405	CAGUAGU	ENST00000267163.4|RB1|ENSG00000139687.9|retinoblastoma 1
hg19_v2_chr19_+_1205740_1205792	0.0573374	CAGUAGU	ENST00000326873.7|STK11|ENSG00000118046.10|serine/threonine kinase 11
hg19_v2_chr17_-_48546232_48546267	0.057116	CAGUAGU	ENST00000258969.4|CHAD|ENSG00000136457.5|chondroadherin
hg19_v2_chrX_-_77041685_77041716	0.0566294	CAGUAGU	ENST00000373344.5|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked 	ENST00000395603.3|ATRX|ENSG00000085224.16|alpha thalassemia/mental retardation syndrome X-linked
hg19_v2_chr17_-_7382834_7382855	0.0545063	CAGUAGU	ENST00000380599.4|ZBTB4|ENSG00000174282.7|zinc finger and BTB domain containing 4
hg19_v2_chr3_-_105587879_105587892	0.0532574	CAGUAGU	ENST00000264122.4|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000403724.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000405772.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr16_+_81348528_81348578	0.0525399	CAGUAGU	ENST00000568107.2|GAN|ENSG00000261609.3|gigaxonin
hg19_v2_chr2_-_47168906_47168994	0.0523799	CAGUAGU	ENST00000444761.2|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409147.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr8_-_42397037_42397121	0.0521445	CAGUAGU	ENST00000342228.3|SLC20A2|ENSG00000168575.5|solute carrier family 20 (phosphate transporter), member 2
hg19_v2_chr9_-_27573392_27573451	0.0517429	CAGUAGU	ENST00000380003.3|C9orf72|ENSG00000147894.10|chromosome 9 open reading frame 72
hg19_v2_chr6_+_26365443_26365503	0.0516468	CAGUAGU	ENST00000527422.1|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000356386.2|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000396934.3|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000377708.2|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000396948.1|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2 	ENST00000508906.2|BTN3A2|ENSG00000186470.9|butyrophilin, subfamily 3, member A2
hg19_v2_chr11_-_44331679_44331716	0.0515559	CAGUAGU	ENST00000329255.3|ALX4|ENSG00000052850.5|ALX homeobox 4
hg19_v2_chr17_+_27717415_27717618	0.0513269	CAGUAGU	ENST00000583121.1|TAOK1|ENSG00000160551.5|TAO kinase 1 	ENST00000261716.3|TAOK1|ENSG00000160551.5|TAO kinase 1
hg19_v2_chr8_-_74791051_74791145	0.0510846	CAGUAGU	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr1_-_70820357_70820435	0.0510577	CAGUAGU	ENST00000370944.4|ANKRD13C|ENSG00000118454.8|ankyrin repeat domain 13C 	ENST00000262346.6|ANKRD13C|ENSG00000118454.8|ankyrin repeat domain 13C
hg19_v2_chr11_+_66045634_66045710	0.0509221	CAGUAGU	ENST00000528852.1|CNIH2|ENSG00000174871.6|cornichon family AMPA receptor auxiliary protein 2 	ENST00000311445.6|CNIH2|ENSG00000174871.6|cornichon family AMPA receptor auxiliary protein 2
hg19_v2_chr1_-_19283163_19283180	0.0504423	CAGUAGU	ENST00000455833.2|IFFO2|ENSG00000169991.6|intermediate filament family orphan 2
hg19_v2_chr7_-_5821314_5821370	0.0482982	CAGUAGU	ENST00000425013.2|RNF216|ENSG00000011275.14|ring finger protein 216 	ENST00000389902.3|RNF216|ENSG00000011275.14|ring finger protein 216
hg19_v2_chr20_+_31407692_31407709	0.0474004	CAGUAGU	ENST00000375571.5|MAPRE1|ENSG00000101367.8|microtubule-associated protein, RP/EB family, member 1
hg19_v2_chr20_-_52210368_52210384	0.0468575	CAGUAGU	ENST00000371471.2|ZNF217|ENSG00000171940.9|zinc finger protein 217
hg19_v2_chr5_+_112312416_112312440	0.0451144	CAGUAGU	ENST00000389063.2|DCP2|ENSG00000172795.11|decapping mRNA 2
hg19_v2_chr5_+_172483347_172483407	0.0447063	CAGUAGU	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr15_+_31619013_31619095	0.0440099	CAGUAGU	ENST00000307145.3|KLF13|ENSG00000169926.5|Kruppel-like factor 13
hg19_v2_chr6_+_13615554_13615601	0.0432162	CAGUAGU	ENST00000451315.2|NOL7|ENSG00000225921.2|nucleolar protein 7, 27kDa
hg19_v2_chr16_+_11762270_11762344	0.0426115	CAGUAGU	ENST00000329565.5|SNN|ENSG00000184602.5|stannin
hg19_v2_chr2_+_48010221_48010307	0.042244	CAGUAGU	ENST00000234420.5|MSH6|ENSG00000116062.10|mutS homolog 6
hg19_v2_chr2_+_138721850_138721890	0.0417287	CAGUAGU	ENST00000329366.4|HNMT|ENSG00000150540.9|histamine N-methyltransferase 	ENST00000280097.3|HNMT|ENSG00000150540.9|histamine N-methyltransferase
hg19_v2_chr14_-_93582148_93582181	0.0415875	CAGUAGU	ENST00000267615.6|ITPK1|ENSG00000100605.12|inositol-tetrakisphosphate 1-kinase 	ENST00000553452.1|ITPK1|ENSG00000100605.12|inositol-tetrakisphosphate 1-kinase
hg19_v2_chr17_-_27621125_27621143	0.0415552	CAGUAGU	ENST00000579665.1|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2 	ENST00000225388.4|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2
hg19_v2_chr4_+_41937131_41937211	0.0408195	CAGUAGU	ENST00000504986.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000508448.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000513702.1|TMEM33|ENSG00000109133.8|transmembrane protein 33 	ENST00000325094.5|TMEM33|ENSG00000109133.8|transmembrane protein 33
hg19_v2_chr6_+_158733692_158733692	0.0404183	CAGUAGU	ENST00000367094.2|TULP4|ENSG00000130338.8|tubby like protein 4 	ENST00000367097.3|TULP4|ENSG00000130338.8|tubby like protein 4
hg19_v2_chr5_+_149109825_149109907	0.0398757	CAGUAGU	ENST00000360453.4|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000394320.3|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000309241.5|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg19_v2_chr2_+_159825143_159825190	0.0396373	CAGUAGU	ENST00000454300.1|TANC1|ENSG00000115183.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 	ENST00000263635.6|TANC1|ENSG00000115183.9|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1
hg19_v2_chr1_-_177133818_177133872	0.0394946	CAGUAGU	ENST00000424564.2|ASTN1|ENSG00000152092.11|astrotactin 1 	ENST00000361833.2|ASTN1|ENSG00000152092.11|astrotactin 1
hg19_v2_chr3_-_185655795_185655924	0.0388309	CAGUAGU	ENST00000342294.4|TRA2B|ENSG00000136527.13|transformer 2 beta homolog (Drosophila) 	ENST00000382191.4|TRA2B|ENSG00000136527.13|transformer 2 beta homolog (Drosophila) 	ENST00000453386.2|TRA2B|ENSG00000136527.13|transformer 2 beta homolog (Drosophila)
hg19_v2_chr17_+_34900737_34900821	0.0371591	CAGUAGU	ENST00000304718.4|GGNBP2|ENSG00000005955.8|gametogenetin binding protein 2 	ENST00000485685.2|GGNBP2|ENSG00000005955.8|gametogenetin binding protein 2
hg19_v2_chr13_-_76056250_76056280	0.0366578	CAGUAGU	ENST00000377636.3|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000431480.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000377625.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000425511.1|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4
hg19_v2_chr4_+_148538517_148538592	0.0346029	CAGUAGU	ENST00000296582.3|TMEM184C|ENSG00000164168.3|transmembrane protein 184C 	ENST00000508208.1|TMEM184C|ENSG00000164168.3|transmembrane protein 184C
hg19_v2_chr4_-_74124502_74124523	0.0335273	CAGUAGU	ENST00000358602.4|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000330838.6|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17 	ENST00000561029.1|ANKRD17|ENSG00000132466.13|ankyrin repeat domain 17
hg19_v2_chr15_+_85523671_85523747	0.032764	CAGUAGU	ENST00000310298.4|PDE8A|ENSG00000073417.10|phosphodiesterase 8A 	ENST00000557957.1|PDE8A|ENSG00000073417.10|phosphodiesterase 8A
hg19_v2_chr5_+_139493665_139493718	0.0325545	CAGUAGU	ENST00000331327.3|PURA|ENSG00000185129.4|purine-rich element binding protein A
hg19_v2_chr7_+_99613195_99613206	0.0317197	CAGUAGU	ENST00000324306.6|ZKSCAN1|ENSG00000106261.12|zinc finger with KRAB and SCAN domains 1
hg19_v2_chr8_+_29952914_29953016	0.0309819	CAGUAGU	ENST00000321250.8|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1 	ENST00000518001.1|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1 	ENST00000520682.1|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1 	ENST00000442880.2|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1 	ENST00000523116.1|LEPROTL1|ENSG00000104660.13|leptin receptor overlapping transcript-like 1
hg19_v2_chr12_+_62860581_62860629	0.0295112	CAGUAGU	ENST00000393632.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393630.3|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000280379.6|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000546600.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552738.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000393629.2|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae) 	ENST00000552115.1|MON2|ENSG00000061987.10|MON2 homolog (S. cerevisiae)
hg19_v2_chr10_+_111767720_111767752	0.0290619	CAGUAGU	ENST00000356080.4|ADD3|ENSG00000148700.9|adducin 3 (gamma) 	ENST00000277900.8|ADD3|ENSG00000148700.9|adducin 3 (gamma)
hg19_v2_chr1_+_167190066_167190156	0.0281858	CAGUAGU	ENST00000367866.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000429375.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000452019.1|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000420254.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000541643.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1
hg19_v2_chr7_-_105517021_105517050	0.0280253	CAGUAGU	ENST00000318724.4|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1 	ENST00000419735.3|ATXN7L1|ENSG00000146776.10|ataxin 7-like 1
hg19_v2_chr1_+_32573636_32573673	0.0274333	CAGUAGU	ENST00000373625.3|KPNA6|ENSG00000025800.9|karyopherin alpha 6 (importin alpha 7)
hg19_v2_chr2_-_158485387_158485517	0.026431	CAGUAGU	ENST00000243349.8|ACVR1C|ENSG00000123612.11|activin A receptor, type IC
hg19_v2_chr6_+_84569359_84569445	0.0259615	CAGUAGU	ENST00000369681.5|CYB5R4|ENSG00000065615.9|cytochrome b5 reductase 4 	ENST00000369679.4|CYB5R4|ENSG00000065615.9|cytochrome b5 reductase 4
hg19_v2_chr16_-_75498553_75498635	0.0257579	CAGUAGU	ENST00000569276.1|TMEM170A|ENSG00000166822.8|transmembrane protein 170A 	ENST00000357613.4|TMEM170A|ENSG00000166822.8|transmembrane protein 170A 	ENST00000561878.1|TMEM170A|ENSG00000166822.8|transmembrane protein 170A 	ENST00000567194.1|RP11-77K12.1|ENSG00000261717.1|Uncharacterized protein  	ENST00000566980.1|TMEM170A|ENSG00000166822.8|transmembrane protein 170A
hg19_v2_chr7_-_19157248_19157295	0.0254621	CAGUAGU	ENST00000242261.5|TWIST1|ENSG00000122691.8|twist family bHLH transcription factor 1
hg19_v2_chr15_+_41523335_41523350	0.0248745	CAGUAGU	ENST00000334660.5|CHP1|ENSG00000187446.7|calcineurin-like EF-hand protein 1
hg19_v2_chr6_-_137113604_137113666	0.0246312	CAGUAGU	ENST00000359015.4|MAP3K5|ENSG00000197442.8|mitogen-activated protein kinase kinase kinase 5
hg19_v2_chr3_+_152017181_152017229	0.0244225	CAGUAGU	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr1_+_224301787_224301836	0.0224633	CAGUAGU	ENST00000366862.5|FBXO28|ENSG00000143756.7|F-box protein 28 	ENST00000424254.2|FBXO28|ENSG00000143756.7|F-box protein 28
hg19_v2_chrX_-_77150985_77151090	0.0221913	CAGUAGU	ENST00000358075.6|MAGT1|ENSG00000102158.15|magnesium transporter 1
hg19_v2_chr4_-_79860506_79860600	0.0214909	CAGUAGU	ENST00000295462.3|PAQR3|ENSG00000163291.10|progestin and adipoQ receptor family member III 	ENST00000380645.4|PAQR3|ENSG00000163291.10|progestin and adipoQ receptor family member III 	ENST00000512733.1|PAQR3|ENSG00000163291.10|progestin and adipoQ receptor family member III
hg19_v2_chr17_+_5185552_5185595	0.0194841	CAGUAGU	ENST00000262477.6|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000408982.2|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000575991.1|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000537505.1|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000546142.2|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1
hg19_v2_chr1_-_184723942_184724047	0.0193986	CAGUAGU	ENST00000318130.8|EDEM3|ENSG00000116406.14|ER degradation enhancer, mannosidase alpha-like 3
hg19_v2_chr20_+_35201857_35201891	0.0189622	CAGUAGU	ENST00000373874.2|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2
hg19_v2_chr8_-_57123815_57123867	0.0183134	CAGUAGU	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr9_+_125703282_125703337	0.0180579	CAGUAGU	ENST00000373647.4|RABGAP1|ENSG00000011454.12|RAB GTPase activating protein 1 	ENST00000402311.1|RABGAP1|ENSG00000011454.12|RAB GTPase activating protein 1
hg19_v2_chr5_-_179780312_179780387	0.0162803	CAGUAGU	ENST00000253778.8|GFPT2|ENSG00000131459.8|glutamine-fructose-6-phosphate transaminase 2
hg19_v2_chr17_+_16593539_16593639	0.0159772	CAGUAGU	ENST00000340621.5|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000399273.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000443444.2|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000360524.8|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A 	ENST00000456009.1|CCDC144A|ENSG00000170160.12|coiled-coil domain containing 144A
hg19_v2_chr7_-_75988321_75988348	0.0153274	CAGUAGU	ENST00000307630.3|YWHAG|ENSG00000170027.5|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
hg19_v2_chr11_+_118307179_118307228	0.0144213	CAGUAGU	ENST00000534358.1|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000531904.2|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000389506.5|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000354520.4|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A
hg19_v2_chrX_+_119495934_119495997	0.0143564	CAGUAGU	ENST00000218008.3|ATP1B4|ENSG00000101892.7|ATPase, Na+/K+ transporting, beta 4 polypeptide 	ENST00000361319.3|ATP1B4|ENSG00000101892.7|ATPase, Na+/K+ transporting, beta 4 polypeptide 	ENST00000539306.1|ATP1B4|ENSG00000101892.7|ATPase, Na+/K+ transporting, beta 4 polypeptide
hg19_v2_chr4_-_129208940_129208976	0.0139982	CAGUAGU	ENST00000296425.5|PGRMC2|ENSG00000164040.12|progesterone receptor membrane component 2
hg19_v2_chrX_+_12993202_12993239	0.0135053	CAGUAGU	ENST00000451311.2|TMSB4X|ENSG00000205542.6|thymosin beta 4, X-linked 	ENST00000380636.1|TMSB4X|ENSG00000205542.6|thymosin beta 4, X-linked
hg19_v2_chr2_-_172967621_172967637	0.0129478	CAGUAGU	ENST00000234198.4|DLX2|ENSG00000115844.6|distal-less homeobox 2 	ENST00000466293.2|DLX2|ENSG00000115844.6|distal-less homeobox 2
hg19_v2_chr3_+_150804676_150804697	0.0129243	CAGUAGU	ENST00000474524.1|MED12L|ENSG00000144893.8|mediator complex subunit 12-like 	ENST00000273432.4|MED12L|ENSG00000144893.8|mediator complex subunit 12-like
hg19_v2_chr8_-_101965146_101965236	0.012776	CAGUAGU	ENST00000395957.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000395948.2|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 	ENST00000457309.1|YWHAZ|ENSG00000164924.13|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta
hg19_v2_chr10_-_88281494_88281572	0.0126503	CAGUAGU	ENST00000298767.5|WAPAL|ENSG00000062650.13|wings apart-like homolog (Drosophila)
hg19_v2_chrX_+_103411189_103411301	0.0112487	CAGUAGU	ENST00000493442.1|FAM199X|ENSG00000123575.8|family with sequence similarity 199, X-linked
hg19_v2_chrX_-_153363188_153363212	0.0101753	CAGUAGU	ENST00000303391.6|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chrX_+_78003204_78003248	0.00943265	CAGUAGU	ENST00000435339.3|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4 	ENST00000514744.1|LPAR4|ENSG00000147145.8|lysophosphatidic acid receptor 4
hg19_v2_chr8_-_17104356_17104395	0.0082142	CAGUAGU	ENST00000361272.4|CNOT7|ENSG00000198791.7|CCR4-NOT transcription complex, subunit 7 	ENST00000523917.1|CNOT7|ENSG00000198791.7|CCR4-NOT transcription complex, subunit 7
hg19_v2_chr14_+_100111447_100111480	0.00791314	CAGUAGU	ENST00000330710.5|HHIPL1|ENSG00000182218.5|HHIP-like 1 	ENST00000357223.2|HHIPL1|ENSG00000182218.5|HHIP-like 1
hg19_v2_chr3_+_107241783_107241850	0.00780164	CAGUAGU	ENST00000415149.2|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000402543.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000325805.8|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila) 	ENST00000427402.1|BBX|ENSG00000114439.14|bobby sox homolog (Drosophila)
hg19_v2_chr22_+_21771656_21771693	0.00756047	CAGUAGU	ENST00000407464.2|HIC2|ENSG00000169635.5|hypermethylated in cancer 2
hg19_v2_chr1_-_228135599_228135640	0.00695214	CAGUAGU	ENST00000272164.5|WNT9A|ENSG00000143816.7|wingless-type MMTV integration site family, member 9A
hg19_v2_chr18_-_43547223_43547312	0.00691785	CAGUAGU	ENST00000282041.5|EPG5|ENSG00000152223.8|ectopic P-granules autophagy protein 5 homolog (C. elegans)
hg19_v2_chr1_+_161736072_161736093	0.00690661	CAGUAGU	ENST00000367942.3|ATF6|ENSG00000118217.5|activating transcription factor 6
hg19_v2_chr5_-_53606396_53606431	0.0066852	CAGUAGU	ENST00000504924.1|ARL15|ENSG00000185305.6|ADP-ribosylation factor-like 15 	ENST00000507646.2|ARL15|ENSG00000185305.6|ADP-ribosylation factor-like 15 	ENST00000502271.1|ARL15|ENSG00000185305.6|ADP-ribosylation factor-like 15
hg19_v2_chr15_+_41221536_41221591	0.00662777	CAGUAGU	ENST00000249749.5|DLL4|ENSG00000128917.5|delta-like 4 (Drosophila)
hg19_v2_chrX_+_133507327_133507386	0.00605493	CAGUAGU	ENST00000332070.3|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000394292.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000370799.1|PHF6|ENSG00000156531.12|PHD finger protein 6 	ENST00000416404.2|PHF6|ENSG00000156531.12|PHD finger protein 6
hg19_v2_chr9_-_72374848_72374894	0.00396105	CAGUAGU	ENST00000377200.5|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1 	ENST00000340434.4|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1 	ENST00000472967.2|PTAR1|ENSG00000188647.8|protein prenyltransferase alpha subunit repeat containing 1
hg19_v2_chr7_+_107384142_107384173	0.00342844	CAGUAGU	ENST00000440859.3|CBLL1|ENSG00000105879.7|Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase
hg19_v2_chr7_-_105752651_105752777	0.00331868	CAGUAGU	ENST00000470347.1|SYPL1|ENSG00000008282.3|synaptophysin-like 1 	ENST00000455385.2|SYPL1|ENSG00000008282.3|synaptophysin-like 1
hg19_v2_chr2_+_44396000_44396053	0.0028837	CAGUAGU	ENST00000409895.4|PPM1B|ENSG00000138032.16|protein phosphatase, Mg2+/Mn2+ dependent, 1B 	ENST00000409432.3|PPM1B|ENSG00000138032.16|protein phosphatase, Mg2+/Mn2+ dependent, 1B 	ENST00000282412.4|PPM1B|ENSG00000138032.16|protein phosphatase, Mg2+/Mn2+ dependent, 1B 	ENST00000378551.2|PPM1B|ENSG00000138032.16|protein phosphatase, Mg2+/Mn2+ dependent, 1B 	ENST00000345249.4|PPM1B|ENSG00000138032.16|protein phosphatase, Mg2+/Mn2+ dependent, 1B
hg19_v2_chr12_+_862089_862343	0.00233542	CAGUAGU	ENST00000315939.6|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000537687.1|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1 	ENST00000447667.2|WNK1|ENSG00000060237.12|WNK lysine deficient protein kinase 1
hg19_v2_chrX_+_76709648_76709648	0.00230718	CAGUAGU	ENST00000439435.1|FGF16|ENSG00000196468.5|fibroblast growth factor 16
hg19_v2_chr15_+_83478370_83478426	0.00198543	CAGUAGU	ENST00000286760.4|WHAMM|ENSG00000156232.6|WAS protein homolog associated with actin, golgi membranes and microtubules
hg19_v2_chr12_-_102874416_102874425	0.00131159	CAGUAGU	ENST00000392904.1|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C) 	ENST00000337514.6|IGF1|ENSG00000017427.11|insulin-like growth factor 1 (somatomedin C)
hg19_v2_chr16_-_1464688_1464752	0.00127346	CAGUAGU	ENST00000389221.4|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000508903.2|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000397462.1|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000301712.5|UNKL|ENSG00000059145.14|unkempt family zinc finger-like
hg19_v2_chr12_+_22778009_22778112	0.00100444	CAGUAGU	ENST00000266517.4|ETNK1|ENSG00000139163.11|ethanolamine kinase 1 	ENST00000335148.3|ETNK1|ENSG00000139163.11|ethanolamine kinase 1
hg19_v2_chr12_+_53774423_53774658	0.00099433	CAGUAGU	ENST00000426431.2|SP1|ENSG00000185591.5|Sp1 transcription factor
