hg19_v2_chr19_+_1450112_1450187	0.00953178	CACCUCC	ENST00000590469.1|APC2|ENSG00000115266.7|adenomatosis polyposis coli 2 	ENST00000233607.2|APC2|ENSG00000115266.7|adenomatosis polyposis coli 2 	ENST00000238483.4|APC2|ENSG00000115266.7|adenomatosis polyposis coli 2 	ENST00000590877.1|APC2|ENSG00000115266.7|adenomatosis polyposis coli 2
hg19_v2_chr6_-_30524951_30524957	0.00934938	CACCUCC	ENST00000376621.3|GNL1|ENSG00000204590.8|guanine nucleotide binding protein-like 1
hg19_v2_chr8_+_11141925_11141937	0.00904911	CACCUCC	ENST00000221086.3|MTMR9|ENSG00000104643.5|myotubularin related protein 9
hg19_v2_chr9_+_35749203_35749350	0.00787148	CACCUCC	ENST00000456972.2|RGP1|ENSG00000107185.8|RGP1 retrograde golgi transport homolog (S. cerevisiae) 	ENST00000378078.4|RGP1|ENSG00000107185.8|RGP1 retrograde golgi transport homolog (S. cerevisiae)
hg19_v2_chr1_+_46972668_46972669	0.00699585	CACCUCC	ENST00000371956.4|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1 	ENST00000360032.3|DMBX1|ENSG00000197587.6|diencephalon/mesencephalon homeobox 1
hg19_v2_chr3_-_48471454_48471594	0.00657583	CACCUCC	ENST00000296440.6|PLXNB1|ENSG00000164050.8|plexin B1 	ENST00000448774.2|PLXNB1|ENSG00000164050.8|plexin B1
hg19_v2_chr11_-_45687128_45687214	0.00622419	CACCUCC	ENST00000308064.2|CHST1|ENSG00000175264.3|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
hg19_v2_chr7_-_20826504_20826526	0.00523725	CACCUCC	ENST00000418710.2|SP8|ENSG00000164651.12|Sp8 transcription factor 	ENST00000361443.4|SP8|ENSG00000164651.12|Sp8 transcription factor
hg19_v2_chr3_-_45017609_45017687	0.00322744	CACCUCC	ENST00000342790.4|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3 	ENST00000424952.2|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3 	ENST00000296127.3|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3 	ENST00000455235.1|ZDHHC3|ENSG00000163812.9|zinc finger, DHHC-type containing 3
hg19_v2_chr10_+_99609996_99609996	0.00308976	CACCUCC	ENST00000370602.1|GOLGA7B|ENSG00000155265.6|golgin A7 family, member B
hg19_v2_chr6_+_30539153_30539255	0.00293158	CACCUCC	ENST00000326195.8|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000376545.3|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000396515.4|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000441867.1|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1 	ENST00000468958.1|ABCF1|ENSG00000204574.8|ATP-binding cassette, sub-family F (GCN20), member 1
hg19_v2_chr15_-_73661605_73661605	0.00291981	CACCUCC	ENST00000261917.3|HCN4|ENSG00000138622.3|hyperpolarization activated cyclic nucleotide-gated potassium channel 4
hg19_v2_chr1_+_11714914_11714976	0.00285783	CACCUCC	ENST00000425796.1|FBXO44|ENSG00000132879.9|F-box protein 44 	ENST00000376770.1|FBXO44|ENSG00000132879.9|F-box protein 44 	ENST00000376768.1|FBXO44|ENSG00000132879.9|F-box protein 44 	ENST00000251547.5|FBXO44|ENSG00000132879.9|F-box protein 44 	ENST00000376760.1|FBXO44|ENSG00000132879.9|F-box protein 44 	ENST00000376762.4|FBXO44|ENSG00000132879.9|F-box protein 44
hg19_v2_chr9_-_123691047_123691188	0.00285575	CACCUCC	ENST00000373887.3|TRAF1|ENSG00000056558.6|TNF receptor-associated factor 1
hg19_v2_chrX_-_53449593_53449677	0.00284085	CACCUCC	ENST00000375340.6|SMC1A|ENSG00000072501.13|structural maintenance of chromosomes 1A 	ENST00000322213.4|SMC1A|ENSG00000072501.13|structural maintenance of chromosomes 1A
hg19_v2_chr9_-_101471479_101471522	0.0026816	CACCUCC	ENST00000259455.2|GABBR2|ENSG00000136928.4|gamma-aminobutyric acid (GABA) B receptor, 2
hg19_v2_chr22_+_40390930_40390994	0.00243204	CACCUCC	ENST00000333407.6|FAM83F|ENSG00000133477.12|family with sequence similarity 83, member F
hg19_v2_chr11_+_73087309_73087452	0.0022683	CACCUCC	ENST00000064780.2|RELT|ENSG00000054967.8|RELT tumor necrosis factor receptor 	ENST00000545687.1|RELT|ENSG00000054967.8|RELT tumor necrosis factor receptor
hg19_v2_chr2_-_169104651_169104651	0.00220264	CACCUCC	ENST00000355999.4|STK39|ENSG00000198648.6|serine threonine kinase 39
hg19_v2_chr15_+_90544532_90544624	0.00196605	CACCUCC	ENST00000268154.4|ZNF710|ENSG00000140548.5|zinc finger protein 710
hg19_v2_chr2_-_25475120_25475180	0.00187534	CACCUCC	ENST00000380746.4|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha 	ENST00000402667.1|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha
hg19_v2_chr11_-_64570706_64570717	0.00181366	CACCUCC	ENST00000294066.2|MAP4K2|ENSG00000168067.7|mitogen-activated protein kinase kinase kinase kinase 2 	ENST00000377350.3|MAP4K2|ENSG00000168067.7|mitogen-activated protein kinase kinase kinase kinase 2
hg19_v2_chr8_+_61591337_61591393	0.00174617	CACCUCC	ENST00000423902.2|CHD7|ENSG00000171316.7|chromodomain helicase DNA binding protein 7
hg19_v2_chr22_-_39268308_39268319	0.00173491	CACCUCC	ENST00000407418.3|CBX6|ENSG00000183741.7|chromobox homolog 6
hg19_v2_chr14_-_77843390_77843462	0.00171896	CACCUCC	ENST00000216468.7|TMED8|ENSG00000100580.7|transmembrane emp24 protein transport domain containing 8
hg19_v2_chr5_+_175792459_175792513	0.00169563	CACCUCC	ENST00000310389.5|ARL10|ENSG00000175414.6|ADP-ribosylation factor-like 10
hg19_v2_chr16_+_30935418_30935418	0.00143633	CACCUCC	ENST00000338343.4|FBXL19|ENSG00000099364.12|F-box and leucine-rich repeat protein 19
hg19_v2_chr8_+_56014949_56015048	0.00129622	CACCUCC	ENST00000327381.6|XKR4|ENSG00000206579.7|XK, Kell blood group complex subunit-related family, member 4
hg19_v2_chr16_-_66584059_66584315	0.00126954	CACCUCC	ENST00000417693.3|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000544898.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000569718.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000527284.1|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000299697.7|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial 	ENST00000451102.2|TK2|ENSG00000166548.11|thymidine kinase 2, mitochondrial
hg19_v2_chr14_+_23790655_23790680	0.00121693	CACCUCC	ENST00000397276.2|PABPN1|ENSG00000100836.6|poly(A) binding protein, nuclear 1
hg19_v2_chr20_+_42875887_42875921	0.000893447	CACCUCC	ENST00000342560.5|GDAP1L1|ENSG00000124194.11|ganglioside induced differentiation associated protein 1-like 1
hg19_v2_chr17_+_56160768_56160786	0.000687686	CACCUCC	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chr2_-_153574480_153574552	0.000649072	CACCUCC	ENST00000410080.1|PRPF40A|ENSG00000196504.11|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)
hg19_v2_chr17_-_42298331_42298361	0.000559444	CACCUCC	ENST00000343638.5|UBTF|ENSG00000108312.10|upstream binding transcription factor, RNA polymerase I
hg19_v2_chr14_+_23776024_23776105	0.000233724	CACCUCC	ENST00000553781.1|BCL2L2-PABPN1|ENSG00000258643.1|BCL2L2-PABPN1 readthrough 	ENST00000556100.1|BCL2L2-PABPN1|ENSG00000258643.1|BCL2L2-PABPN1 readthrough 	ENST00000557236.1|BCL2L2|ENSG00000129473.5|BCL2-like 2 	ENST00000557579.1|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr14_-_23755297_23755350	0.00017786	CACCUCC	ENST00000357460.5|HOMEZ|ENSG00000215271.6|homeobox and leucine zipper encoding
hg19_v2_chr22_-_44708731_44708746	7.38417e-05	CACCUCC	ENST00000381176.4|KIAA1644|ENSG00000138944.7|KIAA1644
