hg19_v2_chr15_-_61521495_61521518	0.263581	ACCCUGU	ENST00000335670.6|RORA|ENSG00000069667.11|RAR-related orphan receptor A
hg19_v2_chr3_+_238273_238302	0.197432	ACCCUGU	ENST00000256509.2|CHL1|ENSG00000134121.5|cell adhesion molecule L1-like
hg19_v2_chr1_-_217262969_217262995	0.189267	ACCCUGU	ENST00000361525.3|ESRRG|ENSG00000196482.12|estrogen-related receptor gamma
hg19_v2_chr1_+_210406121_210406162	0.151363	ACCCUGU	ENST00000367012.3|SERTAD4|ENSG00000082497.7|SERTA domain containing 4
hg19_v2_chr5_-_124080203_124080258	0.142897	ACCCUGU	ENST00000504926.1|ZNF608|ENSG00000168916.11|zinc finger protein 608
hg19_v2_chr3_-_9994021_9994126	0.132759	ACCCUGU	ENST00000411976.2|PRRT3|ENSG00000163704.7|proline-rich transmembrane protein 3 	ENST00000412055.1|PRRT3|ENSG00000163704.7|proline-rich transmembrane protein 3
hg19_v2_chr6_+_107811162_107811196	0.129303	ACCCUGU	ENST00000317357.5|SOBP|ENSG00000112320.7|sine oculis binding protein homolog (Drosophila)
hg19_v2_chr2_+_10183651_10183713	0.126525	ACCCUGU	ENST00000305883.1|KLF11|ENSG00000172059.6|Kruppel-like factor 11
hg19_v2_chr10_-_62149433_62149488	0.122133	ACCCUGU	ENST00000280772.2|ANK3|ENSG00000151150.16|ankyrin 3, node of Ranvier (ankyrin G)
hg19_v2_chr2_+_121103706_121103754	0.11567	ACCCUGU	ENST00000295228.3|INHBB|ENSG00000163083.5|inhibin, beta B
hg19_v2_chr19_+_10527449_10527619	0.111565	ACCCUGU	ENST00000592685.1|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific 	ENST00000380702.2|PDE4A|ENSG00000065989.11|phosphodiesterase 4A, cAMP-specific
hg19_v2_chr19_+_13135386_13135435	0.104395	ACCCUGU	ENST00000360105.4|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000588228.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor) 	ENST00000591028.1|NFIX|ENSG00000008441.12|nuclear factor I/X (CCAAT-binding transcription factor)
hg19_v2_chr7_+_94139105_94139197	0.103016	ACCCUGU	ENST00000297273.4|CASD1|ENSG00000127995.12|CAS1 domain containing 1
hg19_v2_chr1_+_110082487_110082535	0.0876984	ACCCUGU	ENST00000527748.1|GPR61|ENSG00000156097.8|G protein-coupled receptor 61
hg19_v2_chr16_+_57126428_57126450	0.0834365	ACCCUGU	ENST00000290776.8|CPNE2|ENSG00000140848.12|copine II
hg19_v2_chr6_+_117002339_117002400	0.0825423	ACCCUGU	ENST00000413340.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000368564.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6) 	ENST00000356348.1|KPNA5|ENSG00000196911.5|karyopherin alpha 5 (importin alpha 6)
hg19_v2_chr16_-_70719925_70719989	0.0799886	ACCCUGU	ENST00000338779.6|MTSS1L|ENSG00000132613.10|metastasis suppressor 1-like
hg19_v2_chr11_-_115375107_115375283	0.0758999	ACCCUGU	ENST00000545380.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000452722.3|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000537058.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000536727.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000542447.2|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000331581.6|CADM1|ENSG00000182985.12|cell adhesion molecule 1
hg19_v2_chr1_-_39339777_39339777	0.0742343	ACCCUGU	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chr16_+_69599861_69599887	0.0736669	ACCCUGU	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr1_-_94374946_94374994	0.0721066	ACCCUGU	ENST00000370238.3|GCLM|ENSG00000023909.5|glutamate-cysteine ligase, modifier subunit
hg19_v2_chr1_+_28052456_28052515	0.0712784	ACCCUGU	ENST00000373954.6|FAM76A|ENSG00000009780.11|family with sequence similarity 76, member A 	ENST00000419687.2|FAM76A|ENSG00000009780.11|family with sequence similarity 76, member A
hg19_v2_chr1_+_57110972_57111062	0.0705246	ACCCUGU	ENST00000371244.4|PRKAA2|ENSG00000162409.6|protein kinase, AMP-activated, alpha 2 catalytic subunit
hg19_v2_chr22_-_17602200_17602265	0.0702818	ACCCUGU	ENST00000399875.1|CECR6|ENSG00000183307.3|cat eye syndrome chromosome region, candidate 6
hg19_v2_chr5_-_160973649_160973713	0.0682101	ACCCUGU	ENST00000393959.1|GABRB2|ENSG00000145864.8|gamma-aminobutyric acid (GABA) A receptor, beta 2 	ENST00000517547.1|GABRB2|ENSG00000145864.8|gamma-aminobutyric acid (GABA) A receptor, beta 2
hg19_v2_chr4_-_100575781_100575805	0.0673038	ACCCUGU	ENST00000511828.1|RP11-766F14.2|ENSG00000248713.1|Protein LOC285556
hg19_v2_chr6_+_116421976_116422054	0.0644762	ACCCUGU	ENST00000319550.4|NT5DC1|ENSG00000178425.9|5'-nucleotidase domain containing 1 	ENST00000419791.1|NT5DC1|ENSG00000178425.9|5'-nucleotidase domain containing 1
hg19_v2_chr14_+_45366472_45366514	0.058776	ACCCUGU	ENST00000325192.3|C14orf28|ENSG00000179476.3|chromosome 14 open reading frame 28
hg19_v2_chr6_-_91006461_91006517	0.0577141	ACCCUGU	ENST00000257749.4|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2 	ENST00000343122.3|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2 	ENST00000406998.2|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2 	ENST00000453877.1|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg19_v2_chr18_+_9136758_9136852	0.0575123	ACCCUGU	ENST00000383440.2|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000262126.4|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12 	ENST00000577992.1|ANKRD12|ENSG00000101745.11|ankyrin repeat domain 12
hg19_v2_chr9_-_127533519_127533576	0.0564216	ACCCUGU	ENST00000487099.2|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000344523.4|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000373584.3|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1
hg19_v2_chrX_-_129402857_129402880	0.0539521	ACCCUGU	ENST00000447817.1|ZNF280C|ENSG00000056277.11|zinc finger protein 280C 	ENST00000370978.4|ZNF280C|ENSG00000056277.11|zinc finger protein 280C
hg19_v2_chr4_-_53525406_53525502	0.0524958	ACCCUGU	ENST00000451218.2|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46 	ENST00000441222.3|USP46|ENSG00000109189.8|ubiquitin specific peptidase 46
hg19_v2_chr19_-_55954230_55954230	0.0519689	ACCCUGU	ENST00000376325.4|SHISA7|ENSG00000187902.7|shisa family member 7
hg19_v2_chr5_+_56205081_56205092	0.0493919	ACCCUGU	ENST00000285947.2|SETD9|ENSG00000155542.7|SET domain containing 9 	ENST00000541720.1|SETD9|ENSG00000155542.7|SET domain containing 9
hg19_v2_chr7_+_20370746_20370778	0.0483307	ACCCUGU	ENST00000222573.4|ITGB8|ENSG00000105855.5|integrin, beta 8
hg19_v2_chr16_+_50187556_50187779	0.0471486	ACCCUGU	ENST00000561678.1|PAPD5|ENSG00000121274.8|PAP associated domain containing 5 	ENST00000357464.3|PAPD5|ENSG00000121274.8|PAP associated domain containing 5
hg19_v2_chr11_+_18344106_18344143	0.0438868	ACCCUGU	ENST00000534641.1|GTF2H1|ENSG00000110768.7|general transcription factor IIH, polypeptide 1, 62kDa 	ENST00000525831.1|GTF2H1|ENSG00000110768.7|general transcription factor IIH, polypeptide 1, 62kDa 	ENST00000265963.4|GTF2H1|ENSG00000110768.7|general transcription factor IIH, polypeptide 1, 62kDa
hg19_v2_chr1_+_93913713_93913839	0.0436384	ACCCUGU	ENST00000604705.1|FNBP1L|ENSG00000137942.12|formin binding protein 1-like 	ENST00000370253.2|FNBP1L|ENSG00000137942.12|formin binding protein 1-like
hg19_v2_chr5_-_45696253_45696427	0.0428349	ACCCUGU	ENST00000303230.4|HCN1|ENSG00000164588.4|hyperpolarization activated cyclic nucleotide-gated potassium channel 1
hg19_v2_chr10_+_180987_181009	0.0419812	ACCCUGU	ENST00000381591.1|ZMYND11|ENSG00000015171.14|zinc finger, MYND-type containing 11
hg19_v2_chr2_-_160472952_160473080	0.0407075	ACCCUGU	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr13_-_29069232_29069272	0.0382461	ACCCUGU	ENST00000282397.4|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1 	ENST00000541932.1|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1 	ENST00000539099.1|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1
hg19_v2_chr7_-_44924939_44924993	0.0376954	ACCCUGU	ENST00000395699.2|PURB|ENSG00000146676.5|purine-rich element binding protein B
hg19_v2_chr2_+_208394616_208394655	0.037514	ACCCUGU	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr12_+_69864129_69864222	0.036319	ACCCUGU	ENST00000547219.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000299293.2|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549921.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550316.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000548154.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000547414.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550389.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550937.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549092.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550169.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2
hg19_v2_chr1_-_19283163_19283180	0.0361151	ACCCUGU	ENST00000455833.2|IFFO2|ENSG00000169991.6|intermediate filament family orphan 2
hg19_v2_chr3_+_14989076_14989113	0.0353176	ACCCUGU	ENST00000413118.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2 	ENST00000425241.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2
hg19_v2_chr17_+_45727204_45727220	0.0351046	ACCCUGU	ENST00000290158.4|KPNB1|ENSG00000108424.5|karyopherin (importin) beta 1
hg19_v2_chr3_-_142166904_142166916	0.0339806	ACCCUGU	ENST00000264951.4|XRN1|ENSG00000114127.6|5'-3' exoribonuclease 1
hg19_v2_chr8_+_1449532_1449532	0.0329615	ACCCUGU	ENST00000421627.2|DLGAP2|ENSG00000198010.7|discs, large (Drosophila) homolog-associated protein 2
hg19_v2_chrX_+_9431324_9431371	0.0328506	ACCCUGU	ENST00000407597.2|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000424279.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000536365.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000441088.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000380961.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000415293.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked
hg19_v2_chr19_-_14316980_14316999	0.0328078	ACCCUGU	ENST00000361434.3|LPHN1|ENSG00000072071.12|latrophilin 1 	ENST00000340736.6|LPHN1|ENSG00000072071.12|latrophilin 1
hg19_v2_chr5_-_90679145_90679176	0.0327752	ACCCUGU	ENST00000265138.3|ARRDC3|ENSG00000113369.4|arrestin domain containing 3
hg19_v2_chr17_+_4487294_4487307	0.0323371	ACCCUGU	ENST00000338859.4|SMTNL2|ENSG00000188176.7|smoothelin-like 2
hg19_v2_chr10_-_75173785_75173844	0.0317317	ACCCUGU	ENST00000535178.1|ANXA7|ENSG00000138279.11|annexin A7 	ENST00000372921.5|ANXA7|ENSG00000138279.11|annexin A7 	ENST00000372919.4|ANXA7|ENSG00000138279.11|annexin A7
hg19_v2_chr17_-_48207157_48207246	0.028722	ACCCUGU	ENST00000330175.4|SAMD14|ENSG00000167100.10|sterile alpha motif domain containing 14 	ENST00000503131.1|SAMD14|ENSG00000167100.10|sterile alpha motif domain containing 14
hg19_v2_chr20_+_55204351_55204377	0.0274074	ACCCUGU	ENST00000201031.2|TFAP2C|ENSG00000087510.5|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)
hg19_v2_chr2_+_148778570_148778589	0.0272098	ACCCUGU	ENST00000407073.1|MBD5|ENSG00000204406.7|methyl-CpG binding domain protein 5
hg19_v2_chr7_-_138666053_138666146	0.0260427	ACCCUGU	ENST00000440172.1|KIAA1549|ENSG00000122778.5|KIAA1549 	ENST00000422774.1|KIAA1549|ENSG00000122778.5|KIAA1549
hg19_v2_chr18_-_45456930_45456970	0.0255858	ACCCUGU	ENST00000262160.6|SMAD2|ENSG00000175387.11|SMAD family member 2 	ENST00000587269.1|SMAD2|ENSG00000175387.11|SMAD family member 2
hg19_v2_chr9_-_130661916_130661950	0.0248479	ACCCUGU	ENST00000373142.1|ST6GALNAC6|ENSG00000160408.10|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 	ENST00000373146.1|ST6GALNAC6|ENSG00000160408.10|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 	ENST00000373144.3|ST6GALNAC6|ENSG00000160408.10|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
hg19_v2_chr2_-_206950781_206950947	0.0247127	ACCCUGU	ENST00000403263.1|INO80D|ENSG00000114933.11|INO80 complex subunit D
hg19_v2_chr5_+_63461642_63461722	0.0242845	ACCCUGU	ENST00000296615.6|RNF180|ENSG00000164197.7|ring finger protein 180 	ENST00000381081.2|RNF180|ENSG00000164197.7|ring finger protein 180 	ENST00000389100.4|RNF180|ENSG00000164197.7|ring finger protein 180
hg19_v2_chr10_-_79686284_79686527	0.0233393	ACCCUGU	ENST00000372391.2|DLG5|ENSG00000151208.12|discs, large homolog 5 (Drosophila) 	ENST00000372388.2|DLG5|ENSG00000151208.12|discs, large homolog 5 (Drosophila)
hg19_v2_chr4_-_66536057_66536071	0.0228179	ACCCUGU	ENST00000273854.3|EPHA5|ENSG00000145242.9|EPH receptor A5
hg19_v2_chr1_-_39347255_39347303	0.0228158	ACCCUGU	ENST00000454994.2|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa 	ENST00000357771.3|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa
hg19_v2_chr4_+_154125565_154125626	0.0226817	ACCCUGU	ENST00000338700.5|TRIM2|ENSG00000109654.10|tripartite motif containing 2
hg19_v2_chr1_+_109632425_109632425	0.0217478	ACCCUGU	ENST00000338272.8|TMEM167B|ENSG00000215717.5|transmembrane protein 167B
hg19_v2_chr17_-_27621125_27621143	0.0208723	ACCCUGU	ENST00000579665.1|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2 	ENST00000225388.4|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2
hg19_v2_chr22_+_40573921_40573946	0.0170916	ACCCUGU	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr14_+_23775971_23776000	0.0167459	ACCCUGU	ENST00000250405.5|BCL2L2|ENSG00000129473.5|BCL2-like 2
hg19_v2_chr1_+_89990431_89990493	0.0163506	ACCCUGU	ENST00000330947.2|LRRC8B|ENSG00000197147.8|leucine rich repeat containing 8 family, member B 	ENST00000358200.4|LRRC8B|ENSG00000197147.8|leucine rich repeat containing 8 family, member B
hg19_v2_chr7_-_112430647_112430776	0.0163264	ACCCUGU	ENST00000312814.6|TMEM168|ENSG00000146802.8|transmembrane protein 168
hg19_v2_chr11_-_18656028_18656040	0.015602	ACCCUGU	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chr2_-_37193606_37193633	0.0149587	ACCCUGU	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr1_+_22889953_22890070	0.0144789	ACCCUGU	ENST00000374644.4|EPHA8|ENSG00000070886.6|EPH receptor A8 	ENST00000166244.3|EPHA8|ENSG00000070886.6|EPH receptor A8 	ENST00000538803.1|EPHA8|ENSG00000070886.6|EPH receptor A8
hg19_v2_chr6_-_11044509_11044582	0.0143879	ACCCUGU	ENST00000354666.3|ELOVL2|ENSG00000197977.3|ELOVL fatty acid elongase 2
hg19_v2_chr7_-_72936531_72936602	0.0122516	ACCCUGU	ENST00000339594.4|BAZ1B|ENSG00000009954.6|bromodomain adjacent to zinc finger domain, 1B
hg19_v2_chr12_-_133405288_133405404	0.0118697	ACCCUGU	ENST00000204726.3|GOLGA3|ENSG00000090615.8|golgin A3
hg19_v2_chr17_-_76713100_76713122	0.0117862	ACCCUGU	ENST00000585509.1|CYTH1|ENSG00000108669.12|cytohesin 1
hg19_v2_chr17_+_46125707_46125746	0.011743	ACCCUGU	ENST00000584137.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000362042.3|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000585291.1|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1 	ENST00000357480.5|NFE2L1|ENSG00000082641.11|nuclear factor, erythroid 2-like 1
hg19_v2_chr4_+_184020398_184020463	0.0114867	ACCCUGU	ENST00000403733.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2 	ENST00000378925.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2
hg19_v2_chr10_+_98592009_98592061	0.0112689	ACCCUGU	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr5_+_149109825_149109907	0.0110428	ACCCUGU	ENST00000360453.4|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000394320.3|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta 	ENST00000309241.5|PPARGC1B|ENSG00000155846.12|peroxisome proliferator-activated receptor gamma, coactivator 1 beta
hg19_v2_chr17_-_73775839_73775868	0.0105804	ACCCUGU	ENST00000592643.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000591890.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000587171.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000254810.4|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B) 	ENST00000589599.1|H3F3B|ENSG00000132475.4|H3 histone, family 3B (H3.3B)
hg19_v2_chr19_+_3880581_3880692	0.00978599	ACCCUGU	ENST00000450849.2|ATCAY|ENSG00000167654.13|ataxia, cerebellar, Cayman type 	ENST00000301260.6|ATCAY|ENSG00000167654.13|ataxia, cerebellar, Cayman type 	ENST00000398448.3|ATCAY|ENSG00000167654.13|ataxia, cerebellar, Cayman type
hg19_v2_chr12_-_14956396_14956474	0.00949139	ACCCUGU	ENST00000535328.1|WBP11|ENSG00000084463.3|WW domain binding protein 11 	ENST00000261167.2|WBP11|ENSG00000084463.3|WW domain binding protein 11
hg19_v2_chr9_-_115983641_115983682	0.00943564	ACCCUGU	ENST00000238256.3|FKBP15|ENSG00000119321.4|FK506 binding protein 15, 133kDa
hg19_v2_chr17_+_36861735_36861795	0.00834828	ACCCUGU	ENST00000378137.5|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 	ENST00000325718.7|MLLT6|ENSG00000108292.12|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6
hg19_v2_chr4_+_134070439_134070470	0.0082142	ACCCUGU	ENST00000264360.5|PCDH10|ENSG00000138650.7|protocadherin 10
hg19_v2_chr9_-_86595503_86595569	0.00793222	ACCCUGU	ENST00000376281.4|HNRNPK|ENSG00000165119.14|heterogeneous nuclear ribonucleoprotein K 	ENST00000376264.2|HNRNPK|ENSG00000165119.14|heterogeneous nuclear ribonucleoprotein K
hg19_v2_chr9_+_100263912_100263988	0.00751074	ACCCUGU	ENST00000259365.4|TMOD1|ENSG00000136842.9|tropomodulin 1
hg19_v2_chr22_+_30279144_30279202	0.00713016	ACCCUGU	ENST00000401950.2|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000333027.3|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000445401.1|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000323630.5|MTMR3|ENSG00000100330.11|myotubularin related protein 3 	ENST00000351488.3|MTMR3|ENSG00000100330.11|myotubularin related protein 3
hg19_v2_chr22_+_45559722_45559881	0.00652278	ACCCUGU	ENST00000347635.4|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000407019.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000424634.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000417702.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000425733.2|NUP50|ENSG00000093000.14|nucleoporin 50kDa 	ENST00000430547.1|NUP50|ENSG00000093000.14|nucleoporin 50kDa
hg19_v2_chr11_+_65101225_65101359	0.00641979	ACCCUGU	ENST00000528416.1|DPF2|ENSG00000133884.5|D4, zinc and double PHD fingers family 2 	ENST00000415073.2|DPF2|ENSG00000133884.5|D4, zinc and double PHD fingers family 2 	ENST00000252268.4|DPF2|ENSG00000133884.5|D4, zinc and double PHD fingers family 2
hg19_v2_chr2_+_166326157_166326216	0.00613252	ACCCUGU	ENST00000421875.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000314499.7|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000409664.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3
hg19_v2_chr10_+_89622870_89622870	0.00603544	ACCCUGU	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr5_+_143584814_143584840	0.00558894	ACCCUGU	ENST00000507359.3|KCTD16|ENSG00000183775.6|potassium channel tetramerization domain containing 16
hg19_v2_chr2_+_111878483_111878506	0.00525197	ACCCUGU	ENST00000308659.8|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000357757.2|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000393253.2|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000337565.5|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000393256.3|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator)
hg19_v2_chr1_+_36396677_36396749	0.00473254	ACCCUGU	ENST00000373191.4|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3 	ENST00000397828.2|AGO3|ENSG00000126070.14|argonaute RISC catalytic component 3
hg19_v2_chr3_+_183873098_183873230	0.0043687	ACCCUGU	ENST00000313143.3|DVL3|ENSG00000161202.13|dishevelled segment polarity protein 3
hg19_v2_chr15_+_44719394_44719579	0.00383555	ACCCUGU	ENST00000260327.4|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 	ENST00000396780.1|CTDSPL2|ENSG00000137770.9|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
hg19_v2_chrX_-_54384425_54384495	0.00344835	ACCCUGU	ENST00000375169.3|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3 	ENST00000354646.2|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3
hg19_v2_chr1_+_202976493_202976530	0.00284147	ACCCUGU	ENST00000367242.3|TMEM183A|ENSG00000163444.7|transmembrane protein 183A
hg19_v2_chr6_+_71377473_71377520	0.00219739	ACCCUGU	ENST00000370452.3|SMAP1|ENSG00000112305.10|small ArfGAP 1 	ENST00000316999.5|SMAP1|ENSG00000112305.10|small ArfGAP 1 	ENST00000370455.3|SMAP1|ENSG00000112305.10|small ArfGAP 1
hg19_v2_chr10_-_30348439_30348531	0.00183536	ACCCUGU	ENST00000375377.1|KIAA1462|ENSG00000165757.8|KIAA1462
hg19_v2_chr10_-_121632266_121632418	0.00164244	ACCCUGU	ENST00000360003.3|MCMBP|ENSG00000197771.8|minichromosome maintenance complex binding protein 	ENST00000369077.3|MCMBP|ENSG00000197771.8|minichromosome maintenance complex binding protein
hg19_v2_chr4_+_79697495_79697538	0.00148818	ACCCUGU	ENST00000502871.1|BMP2K|ENSG00000138756.13|BMP2 inducible kinase 	ENST00000335016.5|BMP2K|ENSG00000138756.13|BMP2 inducible kinase
hg19_v2_chr21_+_45285050_45285069	0.000964494	ACCCUGU	ENST00000291572.8|AGPAT3|ENSG00000160216.14|1-acylglycerol-3-phosphate O-acyltransferase 3
hg19_v2_chr14_+_33408449_33408525	0.000917204	ACCCUGU	ENST00000346562.2|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000341321.4|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000548645.1|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000356141.4|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3 	ENST00000357798.5|NPAS3|ENSG00000151322.14|neuronal PAS domain protein 3
