hg19_v2_chr13_+_43355683_43355705	5.67036	ACAUUCA	ENST00000537894.1|FAM216B|ENSG00000179813.2|family with sequence similarity 216, member B
hg19_v2_chr7_-_131241361_131241398	3.82305	ACAUUCA	ENST00000378555.3|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000322985.9|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000541194.1|PODXL|ENSG00000128567.12|podocalyxin-like 	ENST00000537928.1|PODXL|ENSG00000128567.12|podocalyxin-like
hg19_v2_chr4_+_75858290_75858305	3.16152	ACAUUCA	ENST00000513238.1|PARM1|ENSG00000169116.7|prostate androgen-regulated mucin-like protein 1
hg19_v2_chr5_-_100238956_100238994	3.11959	ACAUUCA	ENST00000231461.5|ST8SIA4|ENSG00000113532.8|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
hg19_v2_chrY_+_15016725_15016769	2.85132	ACAUUCA	ENST00000336079.3|DDX3Y|ENSG00000067048.12|DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
hg19_v2_chr3_+_158288942_158288959	2.80186	ACAUUCA	ENST00000491767.1|MLF1|ENSG00000178053.13|myeloid leukemia factor 1 	ENST00000355893.5|MLF1|ENSG00000178053.13|myeloid leukemia factor 1
hg19_v2_chr5_+_140227048_140227048	2.58304	ACAUUCA	ENST00000532602.1|PCDHA9|ENSG00000204961.5|protocadherin alpha 9
hg19_v2_chr5_-_137368708_137368721	2.50854	ACAUUCA	ENST00000033079.3|FAM13B|ENSG00000031003.6|family with sequence similarity 13, member B
hg19_v2_chr5_+_140254884_140255058	2.49766	ACAUUCA	ENST00000398631.2|PCDHA12|ENSG00000251664.2|protocadherin alpha 12
hg19_v2_chr5_+_140248518_140248689	2.4584	ACAUUCA	ENST00000398640.2|PCDHA11|ENSG00000249158.2|protocadherin alpha 11
hg19_v2_chr5_+_140213815_140213969	2.39185	ACAUUCA	ENST00000525929.1|PCDHA7|ENSG00000204963.4|protocadherin alpha 7 	ENST00000378125.3|PCDHA7|ENSG00000204963.4|protocadherin alpha 7
hg19_v2_chr3_+_3841108_3841126	2.38182	ACAUUCA	ENST00000319331.3|LRRN1|ENSG00000175928.5|leucine rich repeat neuronal 1
hg19_v2_chr17_+_55333876_55333939	2.35179	ACAUUCA	ENST00000284073.2|MSI2|ENSG00000153944.6|musashi RNA-binding protein 2
hg19_v2_chr5_+_140220769_140220907	2.32871	ACAUUCA	ENST00000531613.1|PCDHA8|ENSG00000204962.4|protocadherin alpha 8 	ENST00000378123.3|PCDHA8|ENSG00000204962.4|protocadherin alpha 8
hg19_v2_chr9_-_3525968_3526016	2.31037	ACAUUCA	ENST00000382004.3|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000302303.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression) 	ENST00000449190.1|RFX3|ENSG00000080298.11|regulatory factor X, 3 (influences HLA class II expression)
hg19_v2_chr8_+_75896731_75896750	2.18844	ACAUUCA	ENST00000262207.4|CRISPLD1|ENSG00000121005.4|cysteine-rich secretory protein LCCL domain containing 1
hg19_v2_chr1_-_46598284_46598356	2.15283	ACAUUCA	ENST00000423209.1|PIK3R3|ENSG00000117461.10|phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 	ENST00000262741.5|PIK3R3|ENSG00000117461.10|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
hg19_v2_chr22_-_39548627_39548692	2.0075	ACAUUCA	ENST00000216133.5|CBX7|ENSG00000100307.8|chromobox homolog 7
hg19_v2_chr6_-_20212630_20212726	1.7603	ACAUUCA	ENST00000324607.7|MBOAT1|ENSG00000172197.9|membrane bound O-acyltransferase domain containing 1 	ENST00000541730.1|MBOAT1|ENSG00000172197.9|membrane bound O-acyltransferase domain containing 1 	ENST00000536798.1|MBOAT1|ENSG00000172197.9|membrane bound O-acyltransferase domain containing 1
hg19_v2_chr1_+_118148556_118148681	1.73675	ACAUUCA	ENST00000369448.3|FAM46C|ENSG00000183508.4|family with sequence similarity 46, member C
hg19_v2_chr14_-_95786200_95786257	1.70503	ACAUUCA	ENST00000298912.4|CLMN|ENSG00000165959.7|calmin (calponin-like, transmembrane)
hg19_v2_chrY_+_14813160_14813160	1.57691	ACAUUCA	ENST00000338981.3|USP9Y|ENSG00000114374.8|ubiquitin specific peptidase 9, Y-linked
hg19_v2_chr14_+_100259666_100259685	1.32054	ACAUUCA	ENST00000262233.6|EML1|ENSG00000066629.12|echinoderm microtubule associated protein like 1 	ENST00000334192.4|EML1|ENSG00000066629.12|echinoderm microtubule associated protein like 1
hg19_v2_chr12_-_56652111_56652183	1.30591	ACAUUCA	ENST00000267116.7|ANKRD52|ENSG00000139645.9|ankyrin repeat domain 52
hg19_v2_chr5_-_121413974_121413986	1.30386	ACAUUCA	ENST00000231004.4|LOX|ENSG00000113083.8|lysyl oxidase
hg19_v2_chr6_-_154831779_154831801	1.28123	ACAUUCA	ENST00000607772.1|CNKSR3|ENSG00000153721.13|CNKSR family member 3
hg19_v2_chr5_+_75699040_75699090	1.26506	ACAUUCA	ENST00000274364.6|IQGAP2|ENSG00000145703.11|IQ motif containing GTPase activating protein 2
hg19_v2_chr12_-_22697343_22697500	1.26054	ACAUUCA	ENST00000446597.1|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000536386.1|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000396028.2|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000545552.1|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000544930.1|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5 	ENST00000333957.4|C2CD5|ENSG00000111731.8|C2 calcium-dependent domain containing 5
hg19_v2_chr12_+_6898638_6898669	1.24942	ACAUUCA	ENST00000011653.4|CD4|ENSG00000010610.5|CD4 molecule
hg19_v2_chr7_+_30174426_30174441	1.24631	ACAUUCA	ENST00000324453.8|C7orf41|ENSG00000180354.11|maturin, neural progenitor differentiation regulator homolog (Xenopus)
hg19_v2_chr19_-_6110474_6110551	1.23074	ACAUUCA	ENST00000587181.1|RFX2|ENSG00000087903.8|regulatory factor X, 2 (influences HLA class II expression) 	ENST00000587321.1|RFX2|ENSG00000087903.8|regulatory factor X, 2 (influences HLA class II expression) 	ENST00000586806.1|RFX2|ENSG00000087903.8|regulatory factor X, 2 (influences HLA class II expression) 	ENST00000589742.1|RFX2|ENSG00000087903.8|regulatory factor X, 2 (influences HLA class II expression) 	ENST00000592546.1|RFX2|ENSG00000087903.8|regulatory factor X, 2 (influences HLA class II expression) 	ENST00000303657.5|RFX2|ENSG00000087903.8|regulatory factor X, 2 (influences HLA class II expression)
hg19_v2_chrX_+_9431324_9431371	1.22714	ACAUUCA	ENST00000407597.2|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000424279.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000536365.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000441088.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000380961.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked 	ENST00000415293.1|TBL1X|ENSG00000101849.11|transducin (beta)-like 1X-linked
hg19_v2_chr2_-_95825352_95825352	1.22055	ACAUUCA	ENST00000295208.2|ZNF514|ENSG00000144026.7|zinc finger protein 514
hg19_v2_chr5_+_140165876_140165876	1.20876	ACAUUCA	ENST00000504120.2|PCDHA1|ENSG00000204970.5|protocadherin alpha 1 	ENST00000394633.3|PCDHA1|ENSG00000204970.5|protocadherin alpha 1 	ENST00000378133.3|PCDHA1|ENSG00000204970.5|protocadherin alpha 1
hg19_v2_chr20_-_50419055_50419066	1.20738	ACAUUCA	ENST00000217086.4|SALL4|ENSG00000101115.8|spalt-like transcription factor 4
hg19_v2_chr1_+_210406121_210406162	1.18323	ACAUUCA	ENST00000367012.3|SERTAD4|ENSG00000082497.7|SERTA domain containing 4
hg19_v2_chrX_-_77395186_77395203	1.15496	ACAUUCA	ENST00000341864.5|TAF9B|ENSG00000187325.4|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa
hg19_v2_chr14_+_74111578_74111730	1.15003	ACAUUCA	ENST00000554113.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000555631.2|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000553645.2|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000311089.3|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000555919.3|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000554339.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1 	ENST00000554871.1|DNAL1|ENSG00000119661.10|dynein, axonemal, light chain 1
hg19_v2_chr2_+_191273052_191273121	1.13824	ACAUUCA	ENST00000417958.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000432036.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6 	ENST00000392328.1|MFSD6|ENSG00000151690.10|major facilitator superfamily domain containing 6
hg19_v2_chr6_-_79787902_79787958	1.13744	ACAUUCA	ENST00000275034.4|PHIP|ENSG00000146247.13|pleckstrin homology domain interacting protein
hg19_v2_chr12_+_32112340_32112358	1.11292	ACAUUCA	ENST00000540924.1|KIAA1551|ENSG00000174718.7|KIAA1551 	ENST00000312561.4|KIAA1551|ENSG00000174718.7|KIAA1551
hg19_v2_chr5_+_140306478_140306478	1.11062	ACAUUCA	ENST00000253807.2|PCDHAC1|ENSG00000248383.3|protocadherin alpha subfamily C, 1
hg19_v2_chr1_-_92351769_92351787	1.07075	ACAUUCA	ENST00000212355.4|TGFBR3|ENSG00000069702.6|transforming growth factor, beta receptor III
hg19_v2_chr5_+_172483347_172483407	1.05144	ACAUUCA	ENST00000522692.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000296953.2|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000540014.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor 	ENST00000520420.1|CREBRF|ENSG00000164463.8|CREB3 regulatory factor
hg19_v2_chr5_+_140261703_140261854	1.0496	ACAUUCA	ENST00000409494.1|PCDHA13|ENSG00000239389.3|protocadherin alpha 13 	ENST00000289272.2|PCDHA13|ENSG00000239389.3|protocadherin alpha 13
hg19_v2_chr15_-_51914996_51915035	1.03842	ACAUUCA	ENST00000251076.5|DMXL2|ENSG00000104093.9|Dmx-like 2
hg19_v2_chr15_+_43803143_43803158	1.03818	ACAUUCA	ENST00000382031.1|MAP1A|ENSG00000166963.8|microtubule-associated protein 1A
hg19_v2_chr5_+_140345820_140345820	1.03541	ACAUUCA	ENST00000289269.5|PCDHAC2|ENSG00000243232.3|protocadherin alpha subfamily C, 2
hg19_v2_chr15_-_61521495_61521518	1.01465	ACAUUCA	ENST00000335670.6|RORA|ENSG00000069667.11|RAR-related orphan receptor A
hg19_v2_chr14_-_39901618_39901704	1.00893	ACAUUCA	ENST00000554932.1|FBXO33|ENSG00000165355.7|F-box protein 33 	ENST00000298097.7|FBXO33|ENSG00000165355.7|F-box protein 33
hg19_v2_chr6_+_138483058_138483159	1.00217	ACAUUCA	ENST00000251691.4|KIAA1244|ENSG00000112379.8|KIAA1244
hg19_v2_chr9_-_80646374_80646374	0.998882	ACAUUCA	ENST00000286548.4|GNAQ|ENSG00000156052.6|guanine nucleotide binding protein (G protein), q polypeptide
hg19_v2_chr16_+_69599861_69599887	0.988266	ACAUUCA	ENST00000354436.2|NFAT5|ENSG00000102908.16|nuclear factor of activated T-cells 5, tonicity-responsive
hg19_v2_chr17_+_53342311_53342400	0.981833	ACAUUCA	ENST00000226067.5|HLF|ENSG00000108924.9|hepatic leukemia factor
hg19_v2_chr6_-_107436473_107436543	0.976837	ACAUUCA	ENST00000369042.1|BEND3|ENSG00000178409.9|BEN domain containing 3
hg19_v2_chr21_-_40685477_40685496	0.961114	ACAUUCA	ENST00000342449.3|BRWD1|ENSG00000185658.9|bromodomain and WD repeat domain containing 1
hg19_v2_chr12_+_111843749_111843763	0.941802	ACAUUCA	ENST00000341259.2|SH2B3|ENSG00000111252.6|SH2B adaptor protein 3
hg19_v2_chr12_+_108525517_108525531	0.938772	ACAUUCA	ENST00000332082.4|WSCD2|ENSG00000075035.5|WSC domain containing 2
hg19_v2_chr1_-_169455169_169455241	0.934732	ACAUUCA	ENST00000367804.4|SLC19A2|ENSG00000117479.8|solute carrier family 19 (thiamine transporter), member 2 	ENST00000236137.5|SLC19A2|ENSG00000117479.8|solute carrier family 19 (thiamine transporter), member 2
hg19_v2_chr8_+_120885949_120885976	0.928606	ACAUUCA	ENST00000523492.1|DEPTOR|ENSG00000155792.5|DEP domain containing MTOR-interacting protein 	ENST00000286234.5|DEPTOR|ENSG00000155792.5|DEP domain containing MTOR-interacting protein
hg19_v2_chr16_+_57126428_57126450	0.918027	ACAUUCA	ENST00000290776.8|CPNE2|ENSG00000140848.12|copine II
hg19_v2_chr13_+_100634004_100634026	0.90517	ACAUUCA	ENST00000376335.3|ZIC2|ENSG00000043355.6|Zic family member 2
hg19_v2_chr18_-_12377283_12377313	0.891597	ACAUUCA	ENST00000269143.3|AFG3L2|ENSG00000141385.5|AFG3-like AAA ATPase 2
hg19_v2_chr1_-_225840747_225840860	0.875364	ACAUUCA	ENST00000366843.2|ENAH|ENSG00000154380.12|enabled homolog (Drosophila) 	ENST00000366844.3|ENAH|ENSG00000154380.12|enabled homolog (Drosophila)
hg19_v2_chr3_-_64211112_64211152	0.872289	ACAUUCA	ENST00000295902.6|PRICKLE2|ENSG00000163637.7|prickle homolog 2 (Drosophila)
hg19_v2_chr4_+_159690218_159690290	0.852827	ACAUUCA	ENST00000264433.6|FNIP2|ENSG00000052795.8|folliculin interacting protein 2
hg19_v2_chr2_+_45878790_45878913	0.84185	ACAUUCA	ENST00000306156.3|PRKCE|ENSG00000171132.9|protein kinase C, epsilon
hg19_v2_chr22_-_39239987_39240041	0.836278	ACAUUCA	ENST00000333039.2|NPTXR|ENSG00000221890.2|neuronal pentraxin receptor
hg19_v2_chr5_-_132073210_132073330	0.827159	ACAUUCA	ENST00000378735.1|KIF3A|ENSG00000131437.11|kinesin family member 3A 	ENST00000378746.4|KIF3A|ENSG00000131437.11|kinesin family member 3A
hg19_v2_chr1_-_57045228_57045242	0.823646	ACAUUCA	ENST00000371250.3|PPAP2B|ENSG00000162407.8|phosphatidic acid phosphatase type 2B
hg19_v2_chr4_+_184826418_184826522	0.822095	ACAUUCA	ENST00000308497.4|STOX2|ENSG00000173320.5|storkhead box 2 	ENST00000438269.1|STOX2|ENSG00000173320.5|storkhead box 2
hg19_v2_chr9_+_91933407_91933458	0.813261	ACAUUCA	ENST00000375807.3|SECISBP2|ENSG00000187742.10|SECIS binding protein 2 	ENST00000339901.4|SECISBP2|ENSG00000187742.10|SECIS binding protein 2
hg19_v2_chr9_-_130742792_130742821	0.81151	ACAUUCA	ENST00000373095.1|FAM102A|ENSG00000167106.7|family with sequence similarity 102, member A
hg19_v2_chr5_+_140207536_140207650	0.811421	ACAUUCA	ENST00000529310.1|PCDHA6|ENSG00000081842.13|protocadherin alpha 6 	ENST00000527624.1|PCDHA6|ENSG00000081842.13|protocadherin alpha 6
hg19_v2_chr13_-_110438914_110438937	0.811107	ACAUUCA	ENST00000375856.3|IRS2|ENSG00000185950.7|insulin receptor substrate 2
hg19_v2_chr5_+_140186647_140186773	0.807742	ACAUUCA	ENST00000512229.2|PCDHA4|ENSG00000204967.6|protocadherin alpha 4 	ENST00000356878.4|PCDHA4|ENSG00000204967.6|protocadherin alpha 4 	ENST00000530339.1|PCDHA4|ENSG00000204967.6|protocadherin alpha 4
hg19_v2_chr12_+_12764773_12764852	0.803508	ACAUUCA	ENST00000228865.2|CREBL2|ENSG00000111269.2|cAMP responsive element binding protein-like 2
hg19_v2_chr11_+_125034586_125034604	0.797392	ACAUUCA	ENST00000298282.9|PKNOX2|ENSG00000165495.11|PBX/knotted 1 homeobox 2
hg19_v2_chr12_-_90049828_90049847	0.792544	ACAUUCA	ENST00000261173.2|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1 	ENST00000348959.3|ATP2B1|ENSG00000070961.10|ATPase, Ca++ transporting, plasma membrane 1
hg19_v2_chr17_-_9929581_9929626	0.783805	ACAUUCA	ENST00000437099.2|GAS7|ENSG00000007237.14|growth arrest-specific 7 	ENST00000396115.2|GAS7|ENSG00000007237.14|growth arrest-specific 7
hg19_v2_chr14_-_25519095_25519280	0.779309	ACAUUCA	ENST00000419632.2|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn) 	ENST00000358326.2|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn) 	ENST00000396700.1|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn) 	ENST00000548724.1|STXBP6|ENSG00000168952.11|syntaxin binding protein 6 (amisyn)
hg19_v2_chr4_+_77356248_77356295	0.778163	ACAUUCA	ENST00000296043.6|SHROOM3|ENSG00000138771.10|shroom family member 3
hg19_v2_chr1_+_114472222_114472377	0.769068	ACAUUCA	ENST00000369558.1|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1 	ENST00000369561.4|HIPK1|ENSG00000163349.17|homeodomain interacting protein kinase 1
hg19_v2_chr5_-_473135_473246	0.767307	ACAUUCA	ENST00000342584.3|CTD-2228K2.5|ENSG00000188242.4|Uncharacterized protein
hg19_v2_chr3_+_69812877_69812962	0.764828	ACAUUCA	ENST00000457080.1|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor 	ENST00000328528.6|MITF|ENSG00000187098.10|microphthalmia-associated transcription factor
hg19_v2_chr20_+_30865429_30865480	0.764223	ACAUUCA	ENST00000375712.3|KIF3B|ENSG00000101350.6|kinesin family member 3B
hg19_v2_chr2_+_179345173_179345221	0.763657	ACAUUCA	ENST00000234453.5|PLEKHA3|ENSG00000116095.6|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
hg19_v2_chr7_-_47621736_47621747	0.757017	ACAUUCA	ENST00000311160.9|TNS3|ENSG00000136205.12|tensin 3
hg19_v2_chr20_+_48429356_48429458	0.742904	ACAUUCA	ENST00000361573.2|SLC9A8|ENSG00000197818.7|solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 	ENST00000541138.1|SLC9A8|ENSG00000197818.7|solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 	ENST00000539601.1|SLC9A8|ENSG00000197818.7|solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8
hg19_v2_chr1_+_164528866_164528877	0.737255	ACAUUCA	ENST00000420696.2|PBX1|ENSG00000185630.14|pre-B-cell leukemia homeobox 1
hg19_v2_chr7_-_95225768_95225967	0.736906	ACAUUCA	ENST00000005178.5|PDK4|ENSG00000004799.7|pyruvate dehydrogenase kinase, isozyme 4
hg19_v2_chr14_+_57735614_57735629	0.700471	ACAUUCA	ENST00000261558.3|AP5M1|ENSG00000053770.7|adaptor-related protein complex 5, mu 1 subunit
hg19_v2_chr10_-_1779663_1779676	0.697827	ACAUUCA	ENST00000381312.1|ADARB2|ENSG00000185736.11|adenosine deaminase, RNA-specific, B2 (non-functional)
hg19_v2_chr5_-_180288248_180288291	0.680055	ACAUUCA	ENST00000512132.1|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein 	ENST00000506439.1|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein 	ENST00000502412.1|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein 	ENST00000359141.6|ZFP62|ENSG00000196670.9|ZFP62 zinc finger protein
hg19_v2_chr11_-_74109422_74109518	0.672789	ACAUUCA	ENST00000298198.4|PGM2L1|ENSG00000165434.6|phosphoglucomutase 2-like 1
hg19_v2_chr10_-_43133950_43133994	0.668099	ACAUUCA	ENST00000359467.3|ZNF33B|ENSG00000196693.10|zinc finger protein 33B
hg19_v2_chr4_-_174451370_174451387	0.664961	ACAUUCA	ENST00000359562.4|HAND2|ENSG00000164107.7|heart and neural crest derivatives expressed 2
hg19_v2_chr2_-_45236540_45236577	0.656124	ACAUUCA	ENST00000303077.6|SIX2|ENSG00000170577.7|SIX homeobox 2
hg19_v2_chr16_+_50775948_50775961	0.655515	ACAUUCA	ENST00000569681.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000569418.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome) 	ENST00000540145.1|CYLD|ENSG00000083799.13|cylindromatosis (turban tumor syndrome)
hg19_v2_chr13_-_20357057_20357105	0.653419	ACAUUCA	ENST00000338910.4|PSPC1|ENSG00000121390.13|paraspeckle component 1
hg19_v2_chrX_-_130037198_130037234	0.652329	ACAUUCA	ENST00000370935.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000338144.3|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2 	ENST00000394363.1|ENOX2|ENSG00000165675.12|ecto-NOX disulfide-thiol exchanger 2
hg19_v2_chr2_-_222436988_222437031	0.64194	ACAUUCA	ENST00000409854.1|EPHA4|ENSG00000116106.7|EPH receptor A4 	ENST00000281821.2|EPHA4|ENSG00000116106.7|EPH receptor A4 	ENST00000392071.4|EPHA4|ENSG00000116106.7|EPH receptor A4 	ENST00000443796.1|EPHA4|ENSG00000116106.7|EPH receptor A4
hg19_v2_chr5_+_102455853_102455961	0.640296	ACAUUCA	ENST00000515845.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000321521.9|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2 	ENST00000507921.1|PPIP5K2|ENSG00000145725.15|diphosphoinositol pentakisphosphate kinase 2
hg19_v2_chr4_-_85887503_85887544	0.637898	ACAUUCA	ENST00000509172.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000322366.6|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000295888.4|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3 	ENST00000502713.1|WDFY3|ENSG00000163625.11|WD repeat and FYVE domain containing 3
hg19_v2_chr10_+_70480963_70481010	0.63664	ACAUUCA	ENST00000265872.6|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000535016.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000538031.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000543719.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000539539.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000543225.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000536012.1|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1 	ENST00000494903.2|CCAR1|ENSG00000060339.9|cell division cycle and apoptosis regulator 1
hg19_v2_chr22_+_24666763_24666876	0.629708	ACAUUCA	ENST00000437398.1|SPECC1L|ENSG00000100014.15|sperm antigen with calponin homology and coiled-coil domains 1-like 	ENST00000421374.1|SPECC1L|ENSG00000100014.15|sperm antigen with calponin homology and coiled-coil domains 1-like 	ENST00000314328.9|SPECC1L|ENSG00000100014.15|sperm antigen with calponin homology and coiled-coil domains 1-like 	ENST00000541492.1|SPECC1L|ENSG00000100014.15|sperm antigen with calponin homology and coiled-coil domains 1-like
hg19_v2_chr12_-_12419703_12419811	0.626747	ACAUUCA	ENST00000543091.1|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6 	ENST00000261349.4|LRP6|ENSG00000070018.4|low density lipoprotein receptor-related protein 6
hg19_v2_chr10_-_52008313_52008370	0.626244	ACAUUCA	ENST00000329428.6|ASAH2|ENSG00000188611.10|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 	ENST00000395526.4|ASAH2|ENSG00000188611.10|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2 	ENST00000447815.1|ASAH2|ENSG00000188611.10|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2
hg19_v2_chr3_+_32147997_32148009	0.624704	ACAUUCA	ENST00000282541.5|GPD1L|ENSG00000152642.6|glycerol-3-phosphate dehydrogenase 1-like
hg19_v2_chr7_-_152133059_152133102	0.620621	ACAUUCA	ENST00000262189.6|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C 	ENST00000355193.2|KMT2C|ENSG00000055609.13|lysine (K)-specific methyltransferase 2C
hg19_v2_chr3_+_23986748_23986761	0.61778	ACAUUCA	ENST00000312521.4|NR1D2|ENSG00000174738.8|nuclear receptor subfamily 1, group D, member 2
hg19_v2_chr11_+_111807863_111807937	0.611523	ACAUUCA	ENST00000440460.2|DIXDC1|ENSG00000150764.9|DIX domain containing 1
hg19_v2_chr3_+_174577070_174577136	0.608254	ACAUUCA	ENST00000454872.1|NAALADL2|ENSG00000177694.10|N-acetylated alpha-linked acidic dipeptidase-like 2
hg19_v2_chr14_-_61190754_61190852	0.608099	ACAUUCA	ENST00000216513.4|SIX4|ENSG00000100625.8|SIX homeobox 4
hg19_v2_chr17_+_61699766_61699826	0.607085	ACAUUCA	ENST00000579585.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000584573.1|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361733.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3 	ENST00000361357.3|MAP3K3|ENSG00000198909.3|mitogen-activated protein kinase kinase kinase 3
hg19_v2_chr10_+_69644404_69644427	0.605057	ACAUUCA	ENST00000212015.6|SIRT1|ENSG00000096717.7|sirtuin 1
hg19_v2_chr3_+_187930719_187930729	0.602133	ACAUUCA	ENST00000312675.4|LPP|ENSG00000145012.8|LIM domain containing preferred translocation partner in lipoma
hg19_v2_chr1_-_84464780_84464862	0.600381	ACAUUCA	ENST00000260505.8|TTLL7|ENSG00000137941.12|tubulin tyrosine ligase-like family, member 7
hg19_v2_chr20_-_50159198_50159299	0.599273	ACAUUCA	ENST00000371564.3|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 	ENST00000396009.3|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 	ENST00000610033.1|NFATC2|ENSG00000101096.15|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
hg19_v2_chr13_-_77601282_77601308	0.597331	ACAUUCA	ENST00000355619.5|FBXL3|ENSG00000005812.6|F-box and leucine-rich repeat protein 3
hg19_v2_chr12_-_77459306_77459365	0.592639	ACAUUCA	ENST00000547316.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000416496.2|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000550669.1|E2F7|ENSG00000165891.11|E2F transcription factor 7 	ENST00000322886.7|E2F7|ENSG00000165891.11|E2F transcription factor 7
hg19_v2_chr7_-_100287071_100287071	0.587969	ACAUUCA	ENST00000275732.5|GIGYF1|ENSG00000146830.9|GRB10 interacting GYF protein 1
hg19_v2_chr1_-_39339777_39339777	0.579442	ACAUUCA	ENST00000397572.2|MYCBP|ENSG00000214114.4|MYC binding protein
hg19_v2_chr14_+_55738021_55738176	0.578239	ACAUUCA	ENST00000313833.4|FBXO34|ENSG00000178974.5|F-box protein 34
hg19_v2_chr6_+_143929307_143929322	0.577966	ACAUUCA	ENST00000427704.2|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2 	ENST00000305766.6|PHACTR2|ENSG00000112419.10|phosphatase and actin regulator 2
hg19_v2_chr5_+_140180635_140180783	0.577448	ACAUUCA	ENST00000522353.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3 	ENST00000532566.2|PCDHA3|ENSG00000255408.2|protocadherin alpha 3
hg19_v2_chr3_-_135914615_135914701	0.577211	ACAUUCA	ENST00000309993.2|MSL2|ENSG00000174579.3|male-specific lethal 2 homolog (Drosophila)
hg19_v2_chr5_+_56469775_56469837	0.573966	ACAUUCA	ENST00000424459.3|GPBP1|ENSG00000062194.11|GC-rich promoter binding protein 1
hg19_v2_chr1_+_147013182_147013329	0.566707	ACAUUCA	ENST00000234739.3|BCL9|ENSG00000116128.5|B-cell CLL/lymphoma 9
hg19_v2_chr11_+_118307179_118307228	0.56631	ACAUUCA	ENST00000534358.1|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000531904.2|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000389506.5|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A 	ENST00000354520.4|KMT2A|ENSG00000118058.16|lysine (K)-specific methyltransferase 2A
hg19_v2_chr22_+_29168652_29168770	0.560089	ACAUUCA	ENST00000249064.4|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117 	ENST00000444523.1|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117 	ENST00000448492.2|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117 	ENST00000421503.2|CCDC117|ENSG00000159873.5|coiled-coil domain containing 117
hg19_v2_chr20_+_11871371_11871428	0.559609	ACAUUCA	ENST00000254977.3|BTBD3|ENSG00000132640.10|BTB (POZ) domain containing 3
hg19_v2_chr20_+_60718785_60718853	0.556258	ACAUUCA	ENST00000421564.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000450482.1|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1 	ENST00000331758.3|SS18L1|ENSG00000184402.10|synovial sarcoma translocation gene on chromosome 18-like 1
hg19_v2_chr9_+_96338860_96338939	0.555068	ACAUUCA	ENST00000375376.4|PHF2|ENSG00000197724.6|PHD finger protein 2
hg19_v2_chr12_+_50451331_50451429	0.553418	ACAUUCA	ENST00000228468.4|ASIC1|ENSG00000110881.7|acid-sensing (proton-gated) ion channel 1
hg19_v2_chr15_+_41952591_41952672	0.551001	ACAUUCA	ENST00000566718.1|MGA|ENSG00000174197.12|MGA, MAX dimerization protein 	ENST00000219905.7|MGA|ENSG00000174197.12|MGA, MAX dimerization protein 	ENST00000389936.4|MGA|ENSG00000174197.12|MGA, MAX dimerization protein 	ENST00000545763.1|MGA|ENSG00000174197.12|MGA, MAX dimerization protein
hg19_v2_chr6_+_69345166_69345259	0.546539	ACAUUCA	ENST00000370598.1|BAI3|ENSG00000135298.9|brain-specific angiogenesis inhibitor 3
hg19_v2_chr17_+_56160768_56160786	0.544828	ACAUUCA	ENST00000579991.2|DYNLL2|ENSG00000264364.2|dynein, light chain, LC8-type 2
hg19_v2_chr8_+_21915368_21915399	0.544578	ACAUUCA	ENST00000265800.5|DMTN|ENSG00000158856.13|dematin actin binding protein 	ENST00000517418.1|DMTN|ENSG00000158856.13|dematin actin binding protein
hg19_v2_chr16_+_2587998_2588011	0.538923	ACAUUCA	ENST00000441549.3|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1 	ENST00000268673.7|PDPK1|ENSG00000140992.14|3-phosphoinositide dependent protein kinase-1
hg19_v2_chr6_-_166075557_166075588	0.538544	ACAUUCA	ENST00000539869.2|PDE10A|ENSG00000112541.9|phosphodiesterase 10A 	ENST00000366882.1|PDE10A|ENSG00000112541.9|phosphodiesterase 10A
hg19_v2_chr3_-_53080047_53080103	0.538135	ACAUUCA	ENST00000482396.1|SFMBT1|ENSG00000163935.9|Scm-like with four mbt domains 1 	ENST00000358080.2|SFMBT1|ENSG00000163935.9|Scm-like with four mbt domains 1 	ENST00000296295.6|SFMBT1|ENSG00000163935.9|Scm-like with four mbt domains 1 	ENST00000394752.3|SFMBT1|ENSG00000163935.9|Scm-like with four mbt domains 1
hg19_v2_chrX_-_20284958_20285039	0.537354	ACAUUCA	ENST00000379565.3|RPS6KA3|ENSG00000177189.8|ribosomal protein S6 kinase, 90kDa, polypeptide 3
hg19_v2_chr4_+_81951957_81952119	0.530881	ACAUUCA	ENST00000282701.2|BMP3|ENSG00000152785.6|bone morphogenetic protein 3
hg19_v2_chr2_+_36582857_36583069	0.530618	ACAUUCA	ENST00000280527.2|CRIM1|ENSG00000150938.5|cysteine rich transmembrane BMP regulator 1 (chordin-like)
hg19_v2_chr2_-_97535708_97535843	0.518996	ACAUUCA	ENST00000305476.5|SEMA4C|ENSG00000168758.6|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
hg19_v2_chr13_-_36705425_36705445	0.518735	ACAUUCA	ENST00000255448.4|DCLK1|ENSG00000133083.10|doublecortin-like kinase 1 	ENST00000360631.3|DCLK1|ENSG00000133083.10|doublecortin-like kinase 1 	ENST00000379892.4|DCLK1|ENSG00000133083.10|doublecortin-like kinase 1
hg19_v2_chr5_+_173315283_173315335	0.515992	ACAUUCA	ENST00000265085.5|CPEB4|ENSG00000113742.8|cytoplasmic polyadenylation element binding protein 4
hg19_v2_chr12_+_118814344_118814369	0.509243	ACAUUCA	ENST00000397564.2|SUDS3|ENSG00000111707.7|suppressor of defective silencing 3 homolog (S. cerevisiae)
hg19_v2_chrX_-_24045303_24045303	0.508529	ACAUUCA	ENST00000328046.8|KLHL15|ENSG00000174010.9|kelch-like family member 15
hg19_v2_chr16_+_50187556_50187779	0.506239	ACAUUCA	ENST00000561678.1|PAPD5|ENSG00000121274.8|PAP associated domain containing 5 	ENST00000357464.3|PAPD5|ENSG00000121274.8|PAP associated domain containing 5
hg19_v2_chr17_-_77770830_77770915	0.500034	ACAUUCA	ENST00000269385.4|CBX8|ENSG00000141570.6|chromobox homolog 8
hg19_v2_chr3_-_11762202_11762226	0.499692	ACAUUCA	ENST00000445411.1|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila) 	ENST00000404339.1|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila) 	ENST00000273038.3|VGLL4|ENSG00000144560.9|vestigial like 4 (Drosophila)
hg19_v2_chr17_-_27621125_27621143	0.496895	ACAUUCA	ENST00000579665.1|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2 	ENST00000225388.4|NUFIP2|ENSG00000108256.4|nuclear fragile X mental retardation protein interacting protein 2
hg19_v2_chrX_+_40944871_40944888	0.496857	ACAUUCA	ENST00000378308.2|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked 	ENST00000324545.8|USP9X|ENSG00000124486.8|ubiquitin specific peptidase 9, X-linked
hg19_v2_chr5_+_10353780_10353890	0.49399	ACAUUCA	ENST00000449913.2|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000503788.1|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase 	ENST00000274140.5|MARCH6|ENSG00000145495.10|membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase
hg19_v2_chr5_+_139027877_139027918	0.493377	ACAUUCA	ENST00000302517.3|CXXC5|ENSG00000171604.7|CXXC finger protein 5
hg19_v2_chr16_-_87525651_87525651	0.491482	ACAUUCA	ENST00000268616.4|ZCCHC14|ENSG00000140948.7|zinc finger, CCHC domain containing 14
hg19_v2_chr9_-_127703333_127703398	0.489136	ACAUUCA	ENST00000373555.4|GOLGA1|ENSG00000136935.9|golgin A1
hg19_v2_chr14_+_90863327_90863356	0.486928	ACAUUCA	ENST00000356978.4|CALM1|ENSG00000198668.6|calmodulin 1 (phosphorylase kinase, delta)
hg19_v2_chr10_+_60144782_60144887	0.486204	ACAUUCA	ENST00000487519.1|TFAM|ENSG00000108064.6|transcription factor A, mitochondrial
hg19_v2_chr14_-_94254821_94254836	0.48214	ACAUUCA	ENST00000393140.1|PRIMA1|ENSG00000175785.8|proline rich membrane anchor 1
hg19_v2_chr4_-_125633876_125633897	0.479717	ACAUUCA	ENST00000504087.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50 	ENST00000515641.1|ANKRD50|ENSG00000151458.7|ankyrin repeat domain 50
hg19_v2_chr3_+_155588300_155588369	0.463219	ACAUUCA	ENST00000496455.2|GMPS|ENSG00000163655.11|guanine monphosphate synthase
hg19_v2_chr7_+_8008418_8008443	0.457335	ACAUUCA	ENST00000223145.5|GLCCI1|ENSG00000106415.8|glucocorticoid induced transcript 1
hg19_v2_chr3_+_16926441_16926463	0.456988	ACAUUCA	ENST00000418129.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2 	ENST00000396755.2|PLCL2|ENSG00000154822.11|phospholipase C-like 2
hg19_v2_chr4_+_26862400_26862416	0.456512	ACAUUCA	ENST00000467011.1|STIM2|ENSG00000109689.10|stromal interaction molecule 2 	ENST00000412829.2|STIM2|ENSG00000109689.10|stromal interaction molecule 2
hg19_v2_chr3_-_69101413_69101457	0.454978	ACAUUCA	ENST00000398559.2|TMF1|ENSG00000144747.10|TATA element modulatory factor 1
hg19_v2_chrX_+_70752917_70752933	0.453513	ACAUUCA	ENST00000373719.3|OGT|ENSG00000147162.9|O-linked N-acetylglucosamine (GlcNAc) transferase
hg19_v2_chr14_-_21493884_21494007	0.452472	ACAUUCA	ENST00000556974.1|NDRG2|ENSG00000165795.16|NDRG family member 2 	ENST00000554419.1|NDRG2|ENSG00000165795.16|NDRG family member 2 	ENST00000298687.5|NDRG2|ENSG00000165795.16|NDRG family member 2 	ENST00000397858.1|NDRG2|ENSG00000165795.16|NDRG family member 2 	ENST00000360463.3|NDRG2|ENSG00000165795.16|NDRG family member 2 	ENST00000350792.3|NDRG2|ENSG00000165795.16|NDRG family member 2 	ENST00000397847.2|NDRG2|ENSG00000165795.16|NDRG family member 2
hg19_v2_chr12_+_102271129_102271164	0.449702	ACAUUCA	ENST00000258534.8|DRAM1|ENSG00000136048.9|DNA-damage regulated autophagy modulator 1
hg19_v2_chr12_+_121837844_121837892	0.440621	ACAUUCA	ENST00000361234.5|RNF34|ENSG00000170633.12|ring finger protein 34, E3 ubiquitin protein ligase
hg19_v2_chr15_+_78556428_78556510	0.440124	ACAUUCA	ENST00000394855.3|DNAJA4|ENSG00000140403.8|DnaJ (Hsp40) homolog, subfamily A, member 4 	ENST00000489435.2|DNAJA4|ENSG00000140403.8|DnaJ (Hsp40) homolog, subfamily A, member 4
hg19_v2_chr1_-_207224307_207224422	0.436625	ACAUUCA	ENST00000315927.4|YOD1|ENSG00000180667.6|YOD1 deubiquitinase
hg19_v2_chr12_+_68042495_68042508	0.433882	ACAUUCA	ENST00000344096.3|DYRK2|ENSG00000127334.10|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2
hg19_v2_chr16_-_73082274_73082274	0.433336	ACAUUCA	ENST00000268489.5|ZFHX3|ENSG00000140836.10|zinc finger homeobox 3
hg19_v2_chr2_-_172750733_172750762	0.432484	ACAUUCA	ENST00000392592.4|SLC25A12|ENSG00000115840.9|solute carrier family 25 (aspartate/glutamate carrier), member 12 	ENST00000422440.2|SLC25A12|ENSG00000115840.9|solute carrier family 25 (aspartate/glutamate carrier), member 12
hg19_v2_chrX_+_24711997_24712075	0.431748	ACAUUCA	ENST00000379068.3|POLA1|ENSG00000101868.6|polymerase (DNA directed), alpha 1, catalytic subunit 	ENST00000379059.3|POLA1|ENSG00000101868.6|polymerase (DNA directed), alpha 1, catalytic subunit
hg19_v2_chr5_+_71403061_71403169	0.429078	ACAUUCA	ENST00000512974.1|MAP1B|ENSG00000131711.10|microtubule-associated protein 1B 	ENST00000296755.7|MAP1B|ENSG00000131711.10|microtubule-associated protein 1B
hg19_v2_chr17_+_65821780_65821826	0.427429	ACAUUCA	ENST00000321892.4|BPTF|ENSG00000171634.12|bromodomain PHD finger transcription factor 	ENST00000335221.5|BPTF|ENSG00000171634.12|bromodomain PHD finger transcription factor 	ENST00000306378.6|BPTF|ENSG00000171634.12|bromodomain PHD finger transcription factor
hg19_v2_chr2_+_242641442_242641478	0.425006	ACAUUCA	ENST00000313552.6|ING5|ENSG00000168395.10|inhibitor of growth family, member 5 	ENST00000406941.1|ING5|ENSG00000168395.10|inhibitor of growth family, member 5
hg19_v2_chr1_+_26737253_26737269	0.424947	ACAUUCA	ENST00000326279.6|LIN28A|ENSG00000131914.6|lin-28 homolog A (C. elegans)
hg19_v2_chr5_+_140235469_140235634	0.424909	ACAUUCA	ENST00000506939.2|PCDHA10|ENSG00000250120.2|protocadherin alpha 10 	ENST00000307360.5|PCDHA10|ENSG00000250120.2|protocadherin alpha 10
hg19_v2_chr2_+_208394616_208394655	0.417847	ACAUUCA	ENST00000432329.2|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000353267.3|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1 	ENST00000445803.1|CREB1|ENSG00000118260.10|cAMP responsive element binding protein 1
hg19_v2_chr2_-_68479614_68479685	0.416241	ACAUUCA	ENST00000234310.3|PPP3R1|ENSG00000221823.6|protein phosphatase 3, regulatory subunit B, alpha
hg19_v2_chr12_-_89918522_89918588	0.414164	ACAUUCA	ENST00000529983.2|GALNT4|ENSG00000257594.2|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4)
hg19_v2_chr4_+_186064395_186064426	0.413032	ACAUUCA	ENST00000281456.6|SLC25A4|ENSG00000151729.6|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4
hg19_v2_chr2_-_202316260_202316308	0.412108	ACAUUCA	ENST00000332624.3|TRAK2|ENSG00000115993.7|trafficking protein, kinesin binding 2
hg19_v2_chr2_+_60983361_60983418	0.411323	ACAUUCA	ENST00000238714.3|PAPOLG|ENSG00000115421.8|poly(A) polymerase gamma
hg19_v2_chr10_+_20105157_20105184	0.41025	ACAUUCA	ENST00000377242.3|PLXDC2|ENSG00000120594.12|plexin domain containing 2 	ENST00000377252.4|PLXDC2|ENSG00000120594.12|plexin domain containing 2
hg19_v2_chr20_+_35201857_35201891	0.409126	ACAUUCA	ENST00000373874.2|TGIF2|ENSG00000118707.5|TGFB-induced factor homeobox 2
hg19_v2_chr4_-_46996424_46996424	0.408765	ACAUUCA	ENST00000264318.3|GABRA4|ENSG00000109158.6|gamma-aminobutyric acid (GABA) A receptor, alpha 4
hg19_v2_chr5_-_90679145_90679176	0.403444	ACAUUCA	ENST00000265138.3|ARRDC3|ENSG00000113369.4|arrestin domain containing 3
hg19_v2_chr3_+_150804676_150804697	0.398648	ACAUUCA	ENST00000474524.1|MED12L|ENSG00000144893.8|mediator complex subunit 12-like 	ENST00000273432.4|MED12L|ENSG00000144893.8|mediator complex subunit 12-like
hg19_v2_chr4_+_48343339_48343414	0.396174	ACAUUCA	ENST00000264313.6|SLAIN2|ENSG00000109171.10|SLAIN motif family, member 2
hg19_v2_chr1_+_26438289_26438352	0.393005	ACAUUCA	ENST00000374271.4|PDIK1L|ENSG00000175087.5|PDLIM1 interacting kinase 1 like 	ENST00000374269.1|PDIK1L|ENSG00000175087.5|PDLIM1 interacting kinase 1 like
hg19_v2_chr5_-_111093406_111093458	0.38535	ACAUUCA	ENST00000379671.3|NREP|ENSG00000134986.9|neuronal regeneration related protein
hg19_v2_chr11_+_108093839_108093850	0.38354	ACAUUCA	ENST00000452508.2|ATM|ENSG00000149311.13|ataxia telangiectasia mutated
hg19_v2_chr2_+_64751433_64751472	0.383275	ACAUUCA	ENST00000238856.4|AFTPH|ENSG00000119844.10|aftiphilin 	ENST00000422803.1|AFTPH|ENSG00000119844.10|aftiphilin 	ENST00000238855.7|AFTPH|ENSG00000119844.10|aftiphilin
hg19_v2_chr12_-_16761007_16761080	0.381817	ACAUUCA	ENST00000354662.1|LMO3|ENSG00000048540.10|LIM domain only 3 (rhombotin-like 2) 	ENST00000441439.2|LMO3|ENSG00000048540.10|LIM domain only 3 (rhombotin-like 2)
hg19_v2_chr2_+_149402553_149402568	0.379964	ACAUUCA	ENST00000258484.6|EPC2|ENSG00000135999.7|enhancer of polycomb homolog 2 (Drosophila) 	ENST00000409654.1|EPC2|ENSG00000135999.7|enhancer of polycomb homolog 2 (Drosophila)
hg19_v2_chr12_-_89919965_89919978	0.377913	ACAUUCA	ENST00000548729.1|POC1B-GALNT4|ENSG00000259075.2|POC1B-GALNT4 readthrough
hg19_v2_chr10_-_32636106_32636150	0.377009	ACAUUCA	ENST00000263062.8|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila) 	ENST00000319778.6|EPC1|ENSG00000120616.11|enhancer of polycomb homolog 1 (Drosophila)
hg19_v2_chr6_-_136610911_136610990	0.37602	ACAUUCA	ENST00000530767.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000527759.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000527536.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000529826.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000531224.1|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1 	ENST00000353331.4|BCLAF1|ENSG00000029363.11|BCL2-associated transcription factor 1
hg19_v2_chr21_+_44394620_44394737	0.374658	ACAUUCA	ENST00000291547.5|PKNOX1|ENSG00000160199.10|PBX/knotted 1 homeobox 1
hg19_v2_chrX_+_72783026_72783049	0.37326	ACAUUCA	ENST00000373504.6|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1 	ENST00000373502.5|CHIC1|ENSG00000204116.7|cysteine-rich hydrophobic domain 1
hg19_v2_chr12_-_10766184_10766222	0.372707	ACAUUCA	ENST00000539554.1|MAGOHB|ENSG00000111196.5|mago-nashi homolog B (Drosophila) 	ENST00000381881.2|MAGOHB|ENSG00000111196.5|mago-nashi homolog B (Drosophila) 	ENST00000320756.2|MAGOHB|ENSG00000111196.5|mago-nashi homolog B (Drosophila)
hg19_v2_chr20_-_35580240_35580251	0.372506	ACAUUCA	ENST00000262878.4|SAMHD1|ENSG00000101347.7|SAM domain and HD domain 1
hg19_v2_chr14_-_96830207_96830207	0.371693	ACAUUCA	ENST00000359933.4|ATG2B|ENSG00000066739.7|autophagy related 2B
hg19_v2_chr2_-_160472952_160473080	0.370146	ACAUUCA	ENST00000541068.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000355831.2|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000343439.5|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B 	ENST00000392782.1|BAZ2B|ENSG00000123636.13|bromodomain adjacent to zinc finger domain, 2B
hg19_v2_chr1_-_51763661_51763672	0.368293	ACAUUCA	ENST00000530004.1|TTC39A|ENSG00000085831.11|tetratricopeptide repeat domain 39A
hg19_v2_chr7_-_111846435_111846471	0.365475	ACAUUCA	ENST00000437633.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000428084.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr11_+_47291193_47291267	0.36229	ACAUUCA	ENST00000428807.1|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000402799.1|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000406482.1|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000349238.3|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000311027.5|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000407859.3|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000395344.3|MADD|ENSG00000110514.14|MAP-kinase activating death domain 	ENST00000444117.1|MADD|ENSG00000110514.14|MAP-kinase activating death domain
hg19_v2_chr13_-_29069232_29069272	0.361775	ACAUUCA	ENST00000282397.4|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1 	ENST00000541932.1|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1 	ENST00000539099.1|FLT1|ENSG00000102755.6|fms-related tyrosine kinase 1
hg19_v2_chr12_-_112123726_112123809	0.361747	ACAUUCA	ENST00000419234.4|BRAP|ENSG00000089234.11|BRCA1 associated protein
hg19_v2_chr4_+_154125565_154125626	0.358935	ACAUUCA	ENST00000338700.5|TRIM2|ENSG00000109654.10|tripartite motif containing 2
hg19_v2_chr5_+_145583156_145583180	0.358881	ACAUUCA	ENST00000265271.5|RBM27|ENSG00000091009.6|RNA binding motif protein 27
hg19_v2_chr8_+_86089460_86089483	0.357703	ACAUUCA	ENST00000418930.2|E2F5|ENSG00000133740.6|E2F transcription factor 5, p130-binding
hg19_v2_chr6_+_87865262_87865339	0.357004	ACAUUCA	ENST00000369577.3|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000518845.1|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000339907.4|ZNF292|ENSG00000188994.8|zinc finger protein 292 	ENST00000496806.2|ZNF292|ENSG00000188994.8|zinc finger protein 292
hg19_v2_chr10_-_98346801_98346812	0.354867	ACAUUCA	ENST00000371142.4|TM9SF3|ENSG00000077147.10|transmembrane 9 superfamily member 3
hg19_v2_chr17_-_7382834_7382855	0.353217	ACAUUCA	ENST00000380599.4|ZBTB4|ENSG00000174282.7|zinc finger and BTB domain containing 4
hg19_v2_chr1_+_113615794_113615884	0.352905	ACAUUCA	ENST00000361127.5|LRIG2|ENSG00000198799.7|leucine-rich repeats and immunoglobulin-like domains 2
hg19_v2_chr11_-_77532050_77532066	0.352006	ACAUUCA	ENST00000308488.6|RSF1|ENSG00000048649.9|remodeling and spacing factor 1
hg19_v2_chr10_-_104474128_104474209	0.350759	ACAUUCA	ENST00000260746.5|ARL3|ENSG00000138175.8|ADP-ribosylation factor-like 3
hg19_v2_chr9_-_128003606_128003631	0.350442	ACAUUCA	ENST00000324460.6|HSPA5|ENSG00000044574.7|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)
hg19_v2_chr20_+_10199468_10199516	0.348246	ACAUUCA	ENST00000254976.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa 	ENST00000304886.2|SNAP25|ENSG00000132639.8|synaptosomal-associated protein, 25kDa
hg19_v2_chr4_+_7045042_7045262	0.345607	ACAUUCA	ENST00000310074.7|TADA2B|ENSG00000173011.11|transcriptional adaptor 2B 	ENST00000512388.1|TADA2B|ENSG00000173011.11|transcriptional adaptor 2B
hg19_v2_chr5_+_102201430_102201478	0.34559	ACAUUCA	ENST00000438793.3|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase 	ENST00000346918.2|PAM|ENSG00000145730.16|peptidylglycine alpha-amidating monooxygenase
hg19_v2_chr3_-_114790179_114790222	0.345196	ACAUUCA	ENST00000462705.1|ZBTB20|ENSG00000181722.11|zinc finger and BTB domain containing 20
hg19_v2_chr17_-_62502639_62502849	0.341999	ACAUUCA	ENST00000225792.5|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000581697.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000584279.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5 	ENST00000577922.1|DDX5|ENSG00000108654.7|DEAD (Asp-Glu-Ala-Asp) box helicase 5
hg19_v2_chr4_-_141677267_141677291	0.340279	ACAUUCA	ENST00000442267.2|TBC1D9|ENSG00000109436.7|TBC1 domain family, member 9 (with GRAM domain)
hg19_v2_chr12_+_69004619_69004699	0.334824	ACAUUCA	ENST00000250559.9|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000393436.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000425247.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000489473.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000422358.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000541167.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538283.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000341355.5|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000537460.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000450214.2|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000545270.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000538980.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000542018.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family 	ENST00000543393.1|RAP1B|ENSG00000127314.13|RAP1B, member of RAS oncogene family
hg19_v2_chr12_+_11802753_11802834	0.334714	ACAUUCA	ENST00000396373.4|ETV6|ENSG00000139083.6|ets variant 6
hg19_v2_chr5_-_81046922_81047072	0.334415	ACAUUCA	ENST00000514493.1|SSBP2|ENSG00000145687.11|single-stranded DNA binding protein 2 	ENST00000320672.4|SSBP2|ENSG00000145687.11|single-stranded DNA binding protein 2
hg19_v2_chr13_-_28545276_28545276	0.331875	ACAUUCA	ENST00000381020.7|CDX2|ENSG00000165556.9|caudal type homeobox 2
hg19_v2_chr16_+_53088885_53088961	0.331328	ACAUUCA	ENST00000566029.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9 	ENST00000447540.1|CHD9|ENSG00000177200.11|chromodomain helicase DNA binding protein 9
hg19_v2_chr8_+_37594130_37594169	0.330465	ACAUUCA	ENST00000518526.1|ERLIN2|ENSG00000147475.10|ER lipid raft associated 2 	ENST00000523887.1|ERLIN2|ENSG00000147475.10|ER lipid raft associated 2 	ENST00000276461.5|ERLIN2|ENSG00000147475.10|ER lipid raft associated 2
hg19_v2_chr7_+_73442102_73442139	0.329186	ACAUUCA	ENST00000445912.1|ELN|ENSG00000049540.12|elastin 	ENST00000252034.7|ELN|ENSG00000049540.12|elastin
hg19_v2_chr15_-_31283798_31283851	0.327434	ACAUUCA	ENST00000435680.1|MTMR10|ENSG00000166912.12|myotubularin related protein 10 	ENST00000425768.1|MTMR10|ENSG00000166912.12|myotubularin related protein 10
hg19_v2_chr12_+_120884222_120884380	0.327063	ACAUUCA	ENST00000551765.1|GATC|ENSG00000257218.1|glutamyl-tRNA(Gln) amidotransferase, subunit C 	ENST00000229384.5|GATC|ENSG00000257218.1|glutamyl-tRNA(Gln) amidotransferase, subunit C
hg19_v2_chr2_+_32582086_32582106	0.326588	ACAUUCA	ENST00000421745.2|BIRC6|ENSG00000115760.9|baculoviral IAP repeat containing 6
hg19_v2_chr8_-_57123815_57123867	0.32599	ACAUUCA	ENST00000316981.3|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000423799.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1 	ENST00000429357.2|PLAG1|ENSG00000181690.3|pleiomorphic adenoma gene 1
hg19_v2_chr1_+_198126093_198126207	0.32032	ACAUUCA	ENST00000367385.4|NEK7|ENSG00000151414.10|NIMA-related kinase 7 	ENST00000442588.1|NEK7|ENSG00000151414.10|NIMA-related kinase 7 	ENST00000538004.1|NEK7|ENSG00000151414.10|NIMA-related kinase 7
hg19_v2_chr2_-_220110187_220110200	0.318489	ACAUUCA	ENST00000295759.7|GLB1L|ENSG00000163521.11|galactosidase, beta 1-like 	ENST00000392089.2|GLB1L|ENSG00000163521.11|galactosidase, beta 1-like
hg19_v2_chr2_-_40679186_40679297	0.317975	ACAUUCA	ENST00000406785.2|SLC8A1|ENSG00000183023.14|solute carrier family 8 (sodium/calcium exchanger), member 1
hg19_v2_chr9_+_108210279_108210435	0.316287	ACAUUCA	ENST00000374716.4|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000374710.3|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000481272.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000484973.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000394926.3|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like 	ENST00000539376.1|FSD1L|ENSG00000106701.7|fibronectin type III and SPRY domain containing 1-like
hg19_v2_chr22_-_50217981_50217981	0.314863	ACAUUCA	ENST00000457780.2|BRD1|ENSG00000100425.14|bromodomain containing 1
hg19_v2_chr11_+_118958689_118958710	0.314468	ACAUUCA	ENST00000535253.1|HMBS|ENSG00000256269.2|hydroxymethylbilane synthase 	ENST00000392841.1|HMBS|ENSG00000256269.2|hydroxymethylbilane synthase
hg19_v2_chr6_-_91006461_91006517	0.311362	ACAUUCA	ENST00000257749.4|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2 	ENST00000343122.3|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2 	ENST00000406998.2|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2 	ENST00000453877.1|BACH2|ENSG00000112182.10|BTB and CNC homology 1, basic leucine zipper transcription factor 2
hg19_v2_chr2_-_218808771_218808851	0.308965	ACAUUCA	ENST00000449814.1|TNS1|ENSG00000079308.12|tensin 1 	ENST00000171887.4|TNS1|ENSG00000079308.12|tensin 1
hg19_v2_chr1_+_214161272_214161322	0.307697	ACAUUCA	ENST00000498508.2|PROX1|ENSG00000117707.11|prospero homeobox 1 	ENST00000366958.4|PROX1|ENSG00000117707.11|prospero homeobox 1
hg19_v2_chr3_+_37903432_37903475	0.305108	ACAUUCA	ENST00000443503.2|CTDSPL|ENSG00000144677.10|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
hg19_v2_chr17_-_38821373_38821440	0.302436	ACAUUCA	ENST00000394052.3|KRT222|ENSG00000213424.4|keratin 222
hg19_v2_chr4_-_170924888_170924950	0.299409	ACAUUCA	ENST00000502832.1|MFAP3L|ENSG00000198948.7|microfibrillar-associated protein 3-like 	ENST00000393704.3|MFAP3L|ENSG00000198948.7|microfibrillar-associated protein 3-like
hg19_v2_chr16_-_87739290_87739290	0.298305	ACAUUCA	ENST00000446344.1|FLJ00104|ENSG00000205047.3|HCG1980662; Uncharacterized protein
hg19_v2_chr12_-_498620_498693	0.297016	ACAUUCA	ENST00000399788.2|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A 	ENST00000382815.4|KDM5A|ENSG00000073614.7|lysine (K)-specific demethylase 5A
hg19_v2_chr17_+_38219063_38219154	0.294882	ACAUUCA	ENST00000584985.1|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000264637.4|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha 	ENST00000450525.2|THRA|ENSG00000126351.8|thyroid hormone receptor, alpha
hg19_v2_chr8_-_42698433_42698486	0.294224	ACAUUCA	ENST00000345117.2|THAP1|ENSG00000131931.4|THAP domain containing, apoptosis associated protein 1 	ENST00000254250.3|THAP1|ENSG00000131931.4|THAP domain containing, apoptosis associated protein 1
hg19_v2_chr3_+_32859510_32859546	0.289483	ACAUUCA	ENST00000383763.5|TRIM71|ENSG00000206557.5|tripartite motif containing 71, E3 ubiquitin protein ligase
hg19_v2_chr8_-_71316021_71316068	0.289172	ACAUUCA	ENST00000452400.2|NCOA2|ENSG00000140396.8|nuclear receptor coactivator 2
hg19_v2_chr10_+_180987_181009	0.287506	ACAUUCA	ENST00000381591.1|ZMYND11|ENSG00000015171.14|zinc finger, MYND-type containing 11
hg19_v2_chr9_+_130830451_130830572	0.286951	ACAUUCA	ENST00000373068.2|SLC25A25|ENSG00000148339.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 	ENST00000373069.5|SLC25A25|ENSG00000148339.8|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25
hg19_v2_chrX_-_134049262_134049297	0.284675	ACAUUCA	ENST00000370783.3|MOSPD1|ENSG00000101928.8|motile sperm domain containing 1
hg19_v2_chr2_+_86947296_86947434	0.282242	ACAUUCA	ENST00000283632.4|RMND5A|ENSG00000153561.8|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
hg19_v2_chr20_+_43514315_43514319	0.281822	ACAUUCA	ENST00000353703.4|YWHAB|ENSG00000166913.8|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
hg19_v2_chr6_+_43211418_43211418	0.277354	ACAUUCA	ENST00000259750.4|TTBK1|ENSG00000146216.7|tau tubulin kinase 1
hg19_v2_chr12_+_8850471_8850534	0.275598	ACAUUCA	ENST00000535829.1|RIMKLB|ENSG00000166532.11|ribosomal modification protein rimK-like family member B 	ENST00000357529.3|RIMKLB|ENSG00000166532.11|ribosomal modification protein rimK-like family member B
hg19_v2_chr5_+_36876833_36876894	0.275424	ACAUUCA	ENST00000282516.8|NIPBL|ENSG00000164190.12|Nipped-B homolog (Drosophila) 	ENST00000448238.2|NIPBL|ENSG00000164190.12|Nipped-B homolog (Drosophila)
hg19_v2_chr7_+_12250886_12250933	0.274408	ACAUUCA	ENST00000444443.1|TMEM106B|ENSG00000106460.14|transmembrane protein 106B 	ENST00000396667.3|TMEM106B|ENSG00000106460.14|transmembrane protein 106B
hg19_v2_chr1_+_167190066_167190156	0.27179	ACAUUCA	ENST00000367866.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000429375.2|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000452019.1|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000420254.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1 	ENST00000541643.3|POU2F1|ENSG00000143190.17|POU class 2 homeobox 1
hg19_v2_chr1_+_11072696_11072735	0.268768	ACAUUCA	ENST00000240185.3|TARDBP|ENSG00000120948.11|TAR DNA binding protein 	ENST00000476201.1|TARDBP|ENSG00000120948.11|TAR DNA binding protein
hg19_v2_chr8_-_91658303_91658327	0.268397	ACAUUCA	ENST00000458549.2|TMEM64|ENSG00000180694.9|transmembrane protein 64
hg19_v2_chr20_+_32077880_32077951	0.266805	ACAUUCA	ENST00000342704.6|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2 	ENST00000375279.2|CBFA2T2|ENSG00000078699.17|core-binding factor, runt domain, alpha subunit 2; translocated to, 2
hg19_v2_chr6_-_16761678_16761721	0.266274	ACAUUCA	ENST00000244769.4|ATXN1|ENSG00000124788.13|ataxin 1 	ENST00000436367.1|ATXN1|ENSG00000124788.13|ataxin 1
hg19_v2_chr9_-_127533519_127533576	0.265604	ACAUUCA	ENST00000487099.2|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000344523.4|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1 	ENST00000373584.3|NR6A1|ENSG00000148200.12|nuclear receptor subfamily 6, group A, member 1
hg19_v2_chr4_+_160188889_160188968	0.264195	ACAUUCA	ENST00000264431.4|RAPGEF2|ENSG00000109756.4|Rap guanine nucleotide exchange factor (GEF) 2
hg19_v2_chr5_-_89770582_89770603	0.261057	ACAUUCA	ENST00000316610.6|MBLAC2|ENSG00000176055.9|metallo-beta-lactamase domain containing 2
hg19_v2_chr11_-_68609377_68609399	0.25933	ACAUUCA	ENST00000265641.5|CPT1A|ENSG00000110090.8|carnitine palmitoyltransferase 1A (liver) 	ENST00000376618.2|CPT1A|ENSG00000110090.8|carnitine palmitoyltransferase 1A (liver)
hg19_v2_chr15_+_50716576_50716624	0.257964	ACAUUCA	ENST00000560297.1|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000307179.4|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000396444.3|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000433963.1|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8 	ENST00000425032.3|USP8|ENSG00000138592.9|ubiquitin specific peptidase 8
hg19_v2_chr15_+_77223960_77223994	0.254923	ACAUUCA	ENST00000394885.3|RCN2|ENSG00000117906.9|reticulocalbin 2, EF-hand calcium binding domain
hg19_v2_chr5_+_76011868_76012005	0.253327	ACAUUCA	ENST00000319211.4|F2R|ENSG00000181104.6|coagulation factor II (thrombin) receptor
hg19_v2_chr5_+_172068232_172068320	0.253128	ACAUUCA	ENST00000520919.1|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B 	ENST00000522853.1|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B 	ENST00000369800.5|NEURL1B|ENSG00000214357.4|neuralized E3 ubiquitin protein ligase 1B
hg19_v2_chrX_-_152864632_152864642	0.24932	ACAUUCA	ENST00000406277.2|FAM58A|ENSG00000147382.14|family with sequence similarity 58, member A
hg19_v2_chr9_-_91793675_91793698	0.248768	ACAUUCA	ENST00000375835.4|SHC3|ENSG00000148082.5|SHC (Src homology 2 domain containing) transforming protein 3 	ENST00000375830.1|SHC3|ENSG00000148082.5|SHC (Src homology 2 domain containing) transforming protein 3
hg19_v2_chr1_+_220701456_220701574	0.247875	ACAUUCA	ENST00000366918.4|MARK1|ENSG00000116141.11|MAP/microtubule affinity-regulating kinase 1 	ENST00000402574.1|MARK1|ENSG00000116141.11|MAP/microtubule affinity-regulating kinase 1
hg19_v2_chr2_-_69614373_69614397	0.244722	ACAUUCA	ENST00000361060.5|GFPT1|ENSG00000198380.8|glutamine--fructose-6-phosphate transaminase 1 	ENST00000357308.4|GFPT1|ENSG00000198380.8|glutamine--fructose-6-phosphate transaminase 1
hg19_v2_chr3_-_33481835_33481905	0.24409	ACAUUCA	ENST00000283629.3|UBP1|ENSG00000153560.7|upstream binding protein 1 (LBP-1a)
hg19_v2_chr15_-_50978965_50979012	0.242088	ACAUUCA	ENST00000560955.1|TRPM7|ENSG00000092439.9|transient receptor potential cation channel, subfamily M, member 7 	ENST00000313478.7|TRPM7|ENSG00000092439.9|transient receptor potential cation channel, subfamily M, member 7
hg19_v2_chr8_-_119964434_119964445	0.239727	ACAUUCA	ENST00000297350.4|TNFRSF11B|ENSG00000164761.4|tumor necrosis factor receptor superfamily, member 11b
hg19_v2_chr2_-_16847084_16847110	0.2392	ACAUUCA	ENST00000406434.1|FAM49A|ENSG00000197872.7|family with sequence similarity 49, member A 	ENST00000381323.3|FAM49A|ENSG00000197872.7|family with sequence similarity 49, member A
hg19_v2_chr10_+_114709999_114710031	0.239051	ACAUUCA	ENST00000355995.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000545257.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000543371.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000536810.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000355717.4|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000538897.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box) 	ENST00000534894.1|TCF7L2|ENSG00000148737.11|transcription factor 7-like 2 (T-cell specific, HMG-box)
hg19_v2_chr1_+_32930647_32930684	0.238405	ACAUUCA	ENST00000609129.1|ZBTB8B|ENSG00000273274.1|zinc finger and BTB domain containing 8B
hg19_v2_chr18_+_32558208_32558340	0.234604	ACAUUCA	ENST00000436190.2|MAPRE2|ENSG00000166974.8|microtubule-associated protein, RP/EB family, member 2
hg19_v2_chr17_+_47865917_47866068	0.229472	ACAUUCA	ENST00000259021.4|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000454930.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000509773.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000510819.1|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7 	ENST00000424009.2|KAT7|ENSG00000136504.7|K(lysine) acetyltransferase 7
hg19_v2_chr12_+_69864129_69864222	0.227076	ACAUUCA	ENST00000547219.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000299293.2|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549921.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550316.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000548154.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000547414.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550389.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550937.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000549092.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2 	ENST00000550169.1|FRS2|ENSG00000166225.4|fibroblast growth factor receptor substrate 2
hg19_v2_chr6_+_10556215_10556240	0.222152	ACAUUCA	ENST00000316170.3|GCNT2|ENSG00000111846.11|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
hg19_v2_chr5_-_79287060_79287093	0.221262	ACAUUCA	ENST00000512560.1|MTX3|ENSG00000177034.10|metaxin 3 	ENST00000509852.1|MTX3|ENSG00000177034.10|metaxin 3 	ENST00000512528.1|MTX3|ENSG00000177034.10|metaxin 3
hg19_v2_chr16_+_15068955_15068991	0.219883	ACAUUCA	ENST00000396410.4|PDXDC1|ENSG00000179889.14|pyridoxal-dependent decarboxylase domain containing 1 	ENST00000569715.1|PDXDC1|ENSG00000179889.14|pyridoxal-dependent decarboxylase domain containing 1 	ENST00000450288.2|PDXDC1|ENSG00000179889.14|pyridoxal-dependent decarboxylase domain containing 1
hg19_v2_chr13_-_84456527_84456541	0.217885	ACAUUCA	ENST00000377084.2|SLITRK1|ENSG00000178235.6|SLIT and NTRK-like family, member 1
hg19_v2_chr6_+_158957431_158957468	0.217735	ACAUUCA	ENST00000367090.3|TMEM181|ENSG00000146433.8|transmembrane protein 181
hg19_v2_chr19_-_5978090_5978129	0.216217	ACAUUCA	ENST00000592621.1|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000034275.8|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000591092.1|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000591333.1|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000590623.1|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000439268.2|RANBP3|ENSG00000031823.10|RAN binding protein 3 	ENST00000587159.1|RANBP3|ENSG00000031823.10|RAN binding protein 3
hg19_v2_chr4_+_113152881_113152912	0.214513	ACAUUCA	ENST00000274000.5|AP1AR|ENSG00000138660.7|adaptor-related protein complex 1 associated regulatory protein
hg19_v2_chr6_+_134274322_134274342	0.214122	ACAUUCA	ENST00000367871.1|TBPL1|ENSG00000028839.5|TBP-like 1 	ENST00000237264.4|TBPL1|ENSG00000028839.5|TBP-like 1
hg19_v2_chr11_-_30038490_30038590	0.213964	ACAUUCA	ENST00000328224.6|KCNA4|ENSG00000182255.6|potassium voltage-gated channel, shaker-related subfamily, member 4
hg19_v2_chrX_+_122993827_122993910	0.213655	ACAUUCA	ENST00000371199.3|XIAP|ENSG00000101966.8|X-linked inhibitor of apoptosis
hg19_v2_chr2_-_64881018_64881064	0.213566	ACAUUCA	ENST00000313349.3|SERTAD2|ENSG00000179833.4|SERTA domain containing 2
hg19_v2_chr14_+_105781048_105781101	0.213109	ACAUUCA	ENST00000458164.2|PACS2|ENSG00000179364.9|phosphofurin acidic cluster sorting protein 2 	ENST00000447393.1|PACS2|ENSG00000179364.9|phosphofurin acidic cluster sorting protein 2
hg19_v2_chr6_-_28367510_28367537	0.212628	ACAUUCA	ENST00000361028.1|ZSCAN12|ENSG00000158691.10|zinc finger and SCAN domain containing 12
hg19_v2_chr13_+_108870714_108870780	0.211972	ACAUUCA	ENST00000375898.3|ABHD13|ENSG00000139826.5|abhydrolase domain containing 13
hg19_v2_chr18_-_45456930_45456970	0.209438	ACAUUCA	ENST00000262160.6|SMAD2|ENSG00000175387.11|SMAD family member 2 	ENST00000587269.1|SMAD2|ENSG00000175387.11|SMAD family member 2
hg19_v2_chr16_+_85646763_85646822	0.209227	ACAUUCA	ENST00000411612.1|GSE1|ENSG00000131149.13|Gse1 coiled-coil protein 	ENST00000253458.7|GSE1|ENSG00000131149.13|Gse1 coiled-coil protein
hg19_v2_chr17_+_45727204_45727220	0.208155	ACAUUCA	ENST00000290158.4|KPNB1|ENSG00000108424.5|karyopherin (importin) beta 1
hg19_v2_chr12_+_94542459_94542513	0.207323	ACAUUCA	ENST00000258526.4|PLXNC1|ENSG00000136040.4|plexin C1
hg19_v2_chr2_+_148602058_148602185	0.206462	ACAUUCA	ENST00000241416.7|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000535787.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA 	ENST00000404590.1|ACVR2A|ENSG00000121989.10|activin A receptor, type IIA
hg19_v2_chr9_+_114659046_114659102	0.205376	ACAUUCA	ENST00000374279.3|UGCG|ENSG00000148154.5|UDP-glucose ceramide glucosyltransferase
hg19_v2_chr15_-_73925651_73925773	0.205265	ACAUUCA	ENST00000545878.1|NPTN|ENSG00000156642.12|neuroplastin 	ENST00000287226.8|NPTN|ENSG00000156642.12|neuroplastin 	ENST00000345330.4|NPTN|ENSG00000156642.12|neuroplastin
hg19_v2_chr11_+_85956182_85956289	0.203967	ACAUUCA	ENST00000327320.4|EED|ENSG00000074266.13|embryonic ectoderm development 	ENST00000351625.6|EED|ENSG00000074266.13|embryonic ectoderm development 	ENST00000534595.1|EED|ENSG00000074266.13|embryonic ectoderm development
hg19_v2_chr20_+_44657845_44657902	0.203041	ACAUUCA	ENST00000243964.3|SLC12A5|ENSG00000124140.8|solute carrier family 12 (potassium/chloride transporter), member 5
hg19_v2_chr3_+_53195136_53195240	0.202705	ACAUUCA	ENST00000394729.2|PRKCD|ENSG00000163932.9|protein kinase C, delta 	ENST00000330452.3|PRKCD|ENSG00000163932.9|protein kinase C, delta
hg19_v2_chr9_-_139334247_139334302	0.202586	ACAUUCA	ENST00000371712.3|INPP5E|ENSG00000148384.11|inositol polyphosphate-5-phosphatase, 72 kDa
hg19_v2_chr12_-_56848426_56848442	0.202521	ACAUUCA	ENST00000257979.4|MIP|ENSG00000135517.6|major intrinsic protein of lens fiber
hg19_v2_chr1_+_193091080_193091222	0.201861	ACAUUCA	ENST00000367435.3|CDC73|ENSG00000134371.9|cell division cycle 73
hg19_v2_chr10_-_81965307_81965351	0.201741	ACAUUCA	ENST00000537102.1|ANXA11|ENSG00000122359.13|annexin A11 	ENST00000372231.3|ANXA11|ENSG00000122359.13|annexin A11 	ENST00000438331.1|ANXA11|ENSG00000122359.13|annexin A11 	ENST00000422982.3|ANXA11|ENSG00000122359.13|annexin A11 	ENST00000360615.4|ANXA11|ENSG00000122359.13|annexin A11 	ENST00000265447.4|ANXA11|ENSG00000122359.13|annexin A11
hg19_v2_chr1_+_90286562_90286617	0.201551	ACAUUCA	ENST00000525774.1|LRRC8D|ENSG00000171492.10|leucine rich repeat containing 8 family, member D 	ENST00000337338.5|LRRC8D|ENSG00000171492.10|leucine rich repeat containing 8 family, member D
hg19_v2_chr6_+_147525541_147525566	0.201102	ACAUUCA	ENST00000367481.3|STXBP5|ENSG00000164506.10|syntaxin binding protein 5 (tomosyn) 	ENST00000546097.1|STXBP5|ENSG00000164506.10|syntaxin binding protein 5 (tomosyn)
hg19_v2_chr5_-_107717058_107717155	0.199817	ACAUUCA	ENST00000359660.5|FBXL17|ENSG00000145743.11|F-box and leucine-rich repeat protein 17
hg19_v2_chr10_+_129705299_129705386	0.198389	ACAUUCA	ENST00000254667.3|PTPRE|ENSG00000132334.12|protein tyrosine phosphatase, receptor type, E
hg19_v2_chr9_-_127905736_127905815	0.197831	ACAUUCA	ENST00000336505.6|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion 	ENST00000373549.4|SCAI|ENSG00000173611.13|suppressor of cancer cell invasion
hg19_v2_chr1_-_51425902_51425976	0.194857	ACAUUCA	ENST00000396153.2|FAF1|ENSG00000185104.15|Fas (TNFRSF6) associated factor 1
hg19_v2_chr5_+_34929677_34929789	0.194495	ACAUUCA	ENST00000342382.4|DNAJC21|ENSG00000168724.10|DnaJ (Hsp40) homolog, subfamily C, member 21 	ENST00000382021.2|DNAJC21|ENSG00000168724.10|DnaJ (Hsp40) homolog, subfamily C, member 21 	ENST00000303525.7|DNAJC21|ENSG00000168724.10|DnaJ (Hsp40) homolog, subfamily C, member 21
hg19_v2_chr5_+_133706865_133706888	0.194488	ACAUUCA	ENST00000265339.2|UBE2B|ENSG00000119048.3|ubiquitin-conjugating enzyme E2B
hg19_v2_chr2_-_197457335_197457421	0.193664	ACAUUCA	ENST00000260983.3|HECW2|ENSG00000138411.6|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2
hg19_v2_chr8_+_61591337_61591393	0.190831	ACAUUCA	ENST00000423902.2|CHD7|ENSG00000171316.7|chromodomain helicase DNA binding protein 7
hg19_v2_chr2_+_200775971_200775988	0.190453	ACAUUCA	ENST00000319974.5|C2orf69|ENSG00000178074.5|chromosome 2 open reading frame 69
hg19_v2_chr1_+_24286287_24286326	0.188831	ACAUUCA	ENST00000334351.7|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2 	ENST00000374468.1|PNRC2|ENSG00000189266.7|proline-rich nuclear receptor coactivator 2
hg19_v2_chr15_-_82338460_82338496	0.188157	ACAUUCA	ENST00000558133.1|MEX3B|ENSG00000183496.5|mex-3 RNA binding family member B 	ENST00000329713.4|MEX3B|ENSG00000183496.5|mex-3 RNA binding family member B
hg19_v2_chr7_+_114055052_114055378	0.18813	ACAUUCA	ENST00000462331.1|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000408937.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000403559.4|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000350908.4|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393498.2|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393495.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000378237.3|FOXP2|ENSG00000128573.18|forkhead box P2 	ENST00000393489.3|FOXP2|ENSG00000128573.18|forkhead box P2
hg19_v2_chr12_+_65563329_65563373	0.187228	ACAUUCA	ENST00000308330.2|LEMD3|ENSG00000174106.2|LEM domain containing 3
hg19_v2_chr6_+_139456226_139456300	0.185309	ACAUUCA	ENST00000367658.2|HECA|ENSG00000112406.4|headcase homolog (Drosophila)
hg19_v2_chr5_-_36152031_36152063	0.184511	ACAUUCA	ENST00000296603.4|LMBRD2|ENSG00000164187.6|LMBR1 domain containing 2
hg19_v2_chr3_+_20081515_20081570	0.184445	ACAUUCA	ENST00000263754.4|KAT2B|ENSG00000114166.7|K(lysine) acetyltransferase 2B
hg19_v2_chr14_+_55493920_55494013	0.184135	ACAUUCA	ENST00000395472.2|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4 	ENST00000555846.1|SOCS4|ENSG00000180008.8|suppressor of cytokine signaling 4
hg19_v2_chr7_+_140774032_140774032	0.183174	ACAUUCA	ENST00000565468.1|TMEM178B|ENSG00000261115.1|transmembrane protein 178B
hg19_v2_chr8_-_74791051_74791145	0.183058	ACAUUCA	ENST00000453587.2|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602969.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000602593.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000419880.3|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative) 	ENST00000517608.1|UBE2W|ENSG00000104343.15|ubiquitin-conjugating enzyme E2W (putative)
hg19_v2_chr3_+_38495333_38495422	0.17977	ACAUUCA	ENST00000352511.4|ACVR2B|ENSG00000114739.9|activin A receptor, type IIB
hg19_v2_chr17_+_42148097_42148119	0.178827	ACAUUCA	ENST00000269097.4|G6PC3|ENSG00000141349.4|glucose 6 phosphatase, catalytic, 3
hg19_v2_chr2_+_168725458_168725458	0.177748	ACAUUCA	ENST00000392690.3|B3GALT1|ENSG00000172318.4|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
hg19_v2_chr9_+_128024067_128024190	0.172958	ACAUUCA	ENST00000461379.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394084.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394105.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000470056.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394104.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000265956.4|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000394083.2|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000495955.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000467750.1|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1 	ENST00000297933.6|GAPVD1|ENSG00000165219.17|GTPase activating protein and VPS9 domains 1
hg19_v2_chr16_-_4166186_4166186	0.172168	ACAUUCA	ENST00000294016.3|ADCY9|ENSG00000162104.5|adenylate cyclase 9
hg19_v2_chr2_-_225450013_225450068	0.169031	ACAUUCA	ENST00000264414.4|CUL3|ENSG00000036257.8|cullin 3
hg19_v2_chr10_+_1095416_1095482	0.167544	ACAUUCA	ENST00000358220.1|WDR37|ENSG00000047056.10|WD repeat domain 37
hg19_v2_chr15_+_68346501_68346550	0.167135	ACAUUCA	ENST00000249636.6|PIAS1|ENSG00000033800.9|protein inhibitor of activated STAT, 1
hg19_v2_chr13_+_49550015_49550070	0.165777	ACAUUCA	ENST00000492622.2|FNDC3A|ENSG00000102531.12|fibronectin type III domain containing 3A
hg19_v2_chr9_-_14314066_14314075	0.165621	ACAUUCA	ENST00000397575.3|NFIB|ENSG00000147862.10|nuclear factor I/B
hg19_v2_chr13_+_28813645_28813770	0.163711	ACAUUCA	ENST00000282391.5|PAN3|ENSG00000152520.9|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr6_+_126277842_126277993	0.163335	ACAUUCA	ENST00000229633.5|HINT3|ENSG00000111911.5|histidine triad nucleotide binding protein 3
hg19_v2_chr12_+_124457746_124457842	0.161741	ACAUUCA	ENST00000392404.3|ZNF664|ENSG00000179195.11|zinc finger protein 664 	ENST00000538932.2|ZNF664|ENSG00000179195.11|zinc finger protein 664 	ENST00000540762.2|FAM101A|ENSG00000178882.9|family with sequence similarity 101, member A 	ENST00000337815.4|ZNF664|ENSG00000179195.11|zinc finger protein 664
hg19_v2_chr18_-_72921303_72921339	0.161407	ACAUUCA	ENST00000322342.3|ZADH2|ENSG00000180011.6|zinc binding alcohol dehydrogenase domain containing 2
hg19_v2_chr5_+_57878859_57878872	0.159644	ACAUUCA	ENST00000282878.4|RAB3C|ENSG00000152932.6|RAB3C, member RAS oncogene family
hg19_v2_chr12_-_48499591_48499663	0.158065	ACAUUCA	ENST00000551330.1|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000004980.5|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000339976.6|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1 	ENST00000448372.1|SENP1|ENSG00000079387.9|SUMO1/sentrin specific peptidase 1
hg19_v2_chr5_-_150080472_150080669	0.156184	ACAUUCA	ENST00000521464.1|RBM22|ENSG00000086589.7|RNA binding motif protein 22 	ENST00000518917.1|RBM22|ENSG00000086589.7|RNA binding motif protein 22 	ENST00000447771.2|RBM22|ENSG00000086589.7|RNA binding motif protein 22 	ENST00000540000.1|RBM22|ENSG00000086589.7|RNA binding motif protein 22 	ENST00000199814.4|RBM22|ENSG00000086589.7|RNA binding motif protein 22
hg19_v2_chr17_-_46692287_46692317	0.155328	ACAUUCA	ENST00000239144.4|HOXB8|ENSG00000120068.5|homeobox B8
hg19_v2_chr10_-_121356007_121356147	0.153708	ACAUUCA	ENST00000369093.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1 	ENST00000436547.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1
hg19_v2_chr1_-_197169672_197169672	0.153509	ACAUUCA	ENST00000367405.4|ZBTB41|ENSG00000177888.7|zinc finger and BTB domain containing 41
hg19_v2_chr4_+_38665810_38665827	0.150773	ACAUUCA	ENST00000261438.5|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic) 	ENST00000514033.1|KLF3|ENSG00000109787.8|Kruppel-like factor 3 (basic)
hg19_v2_chr1_+_29063271_29063283	0.150509	ACAUUCA	ENST00000373812.3|YTHDF2|ENSG00000198492.10|YTH domain family, member 2
hg19_v2_chr7_+_6144514_6144614	0.150065	ACAUUCA	ENST00000306177.5|USP42|ENSG00000106346.7|ubiquitin specific peptidase 42 	ENST00000465073.2|USP42|ENSG00000106346.7|ubiquitin specific peptidase 42
hg19_v2_chr12_-_101801505_101801598	0.149983	ACAUUCA	ENST00000539055.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000551688.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000551671.1|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1 	ENST00000261636.8|ARL1|ENSG00000120805.9|ADP-ribosylation factor-like 1
hg19_v2_chr6_-_18265050_18265072	0.148317	ACAUUCA	ENST00000397239.3|DEK|ENSG00000124795.10|DEK oncogene
hg19_v2_chr2_+_191513959_191514047	0.147928	ACAUUCA	ENST00000337386.5|NAB1|ENSG00000138386.12|NGFI-A binding protein 1 (EGR1 binding protein 1) 	ENST00000357215.5|NAB1|ENSG00000138386.12|NGFI-A binding protein 1 (EGR1 binding protein 1)
hg19_v2_chr16_+_56225248_56225307	0.147505	ACAUUCA	ENST00000262493.6|GNAO1|ENSG00000087258.9|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O
hg19_v2_chr9_+_36036430_36036430	0.14731	ACAUUCA	ENST00000377966.3|RECK|ENSG00000122707.7|reversion-inducing-cysteine-rich protein with kazal motifs
hg19_v2_chr7_-_156803329_156803362	0.146109	ACAUUCA	ENST00000252971.6|MNX1|ENSG00000130675.10|motor neuron and pancreas homeobox 1
hg19_v2_chr12_-_46766577_46766650	0.14558	ACAUUCA	ENST00000256689.5|SLC38A2|ENSG00000134294.9|solute carrier family 38, member 2
hg19_v2_chr22_+_40573921_40573946	0.144981	ACAUUCA	ENST00000454349.2|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B 	ENST00000335727.9|TNRC6B|ENSG00000100354.16|trinucleotide repeat containing 6B
hg19_v2_chr17_-_40540377_40540481	0.141289	ACAUUCA	ENST00000404395.3|STAT3|ENSG00000168610.10|signal transducer and activator of transcription 3 (acute-phase response factor) 	ENST00000389272.3|STAT3|ENSG00000168610.10|signal transducer and activator of transcription 3 (acute-phase response factor) 	ENST00000585517.1|STAT3|ENSG00000168610.10|signal transducer and activator of transcription 3 (acute-phase response factor) 	ENST00000588065.1|STAT3|ENSG00000168610.10|signal transducer and activator of transcription 3 (acute-phase response factor)
hg19_v2_chr1_-_70820357_70820435	0.13981	ACAUUCA	ENST00000370944.4|ANKRD13C|ENSG00000118454.8|ankyrin repeat domain 13C 	ENST00000262346.6|ANKRD13C|ENSG00000118454.8|ankyrin repeat domain 13C
hg19_v2_chr7_+_32535060_32535322	0.139384	ACAUUCA	ENST00000318709.4|AVL9|ENSG00000105778.13|AVL9 homolog (S. cerevisiase) 	ENST00000409301.1|AVL9|ENSG00000105778.13|AVL9 homolog (S. cerevisiase) 	ENST00000404479.1|AVL9|ENSG00000105778.13|AVL9 homolog (S. cerevisiase)
hg19_v2_chr5_-_32313019_32313081	0.137877	ACAUUCA	ENST00000280285.5|MTMR12|ENSG00000150712.6|myotubularin related protein 12 	ENST00000264934.5|MTMR12|ENSG00000150712.6|myotubularin related protein 12
hg19_v2_chr3_-_195270162_195270209	0.137778	ACAUUCA	ENST00000438848.1|PPP1R2|ENSG00000184203.3|protein phosphatase 1, regulatory (inhibitor) subunit 2 	ENST00000328432.3|PPP1R2|ENSG00000184203.3|protein phosphatase 1, regulatory (inhibitor) subunit 2
hg19_v2_chr6_-_152958521_152958549	0.137773	ACAUUCA	ENST00000367255.5|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1 	ENST00000265368.4|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1 	ENST00000448038.1|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1 	ENST00000341594.5|SYNE1|ENSG00000131018.18|spectrin repeat containing, nuclear envelope 1
hg19_v2_chr7_+_99613195_99613206	0.136878	ACAUUCA	ENST00000324306.6|ZKSCAN1|ENSG00000106261.12|zinc finger with KRAB and SCAN domains 1
hg19_v2_chr14_-_92572894_92572965	0.135796	ACAUUCA	ENST00000532032.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000506466.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000555381.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000557311.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000554592.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000554672.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000553491.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000556220.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000502250.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000503767.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000393287.5|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000340660.6|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000545170.1|ATXN3|ENSG00000066427.17|ataxin 3 	ENST00000429774.2|ATXN3|ENSG00000066427.17|ataxin 3
hg19_v2_chr1_+_93544791_93544807	0.133935	ACAUUCA	ENST00000545708.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000540243.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000370298.4|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2
hg19_v2_chr4_-_151936865_151936891	0.133422	ACAUUCA	ENST00000535741.1|LRBA|ENSG00000198589.6|LPS-responsive vesicle trafficking, beach and anchor containing
hg19_v2_chr10_+_97803151_97803348	0.131943	ACAUUCA	ENST00000403870.3|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000265992.5|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000465148.2|CCNJ|ENSG00000107443.11|cyclin J 	ENST00000534974.1|CCNJ|ENSG00000107443.11|cyclin J
hg19_v2_chr11_-_6255846_6255882	0.131929	ACAUUCA	ENST00000449352.2|FAM160A2|ENSG00000051009.6|family with sequence similarity 160, member A2
hg19_v2_chr1_-_212004090_212004168	0.131568	ACAUUCA	ENST00000366997.4|LPGAT1|ENSG00000123684.8|lysophosphatidylglycerol acyltransferase 1
hg19_v2_chr2_-_86948245_86948245	0.131003	ACAUUCA	ENST00000439940.2|CHMP3|ENSG00000115561.10|charged multivesicular body protein 3 	ENST00000604011.1|RNF103-CHMP3|ENSG00000249884.4|RNF103-CHMP3 readthrough
hg19_v2_chr14_+_45366472_45366514	0.130623	ACAUUCA	ENST00000325192.3|C14orf28|ENSG00000179476.3|chromosome 14 open reading frame 28
hg19_v2_chr12_+_122516626_122516645	0.130227	ACAUUCA	ENST00000319080.7|MLXIP|ENSG00000175727.9|MLX interacting protein
hg19_v2_chr12_+_27932803_27932953	0.127687	ACAUUCA	ENST00000381271.2|KLHL42|ENSG00000087448.5|kelch-like family member 42
hg19_v2_chr5_-_1524015_1524108	0.124007	ACAUUCA	ENST00000283415.3|LPCAT1|ENSG00000153395.5|lysophosphatidylcholine acyltransferase 1
hg19_v2_chr18_+_11851383_11851399	0.123612	ACAUUCA	ENST00000526991.2|CHMP1B|ENSG00000255112.2|charged multivesicular body protein 1B
hg19_v2_chr5_-_56247935_56247959	0.12194	ACAUUCA	ENST00000381199.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381226.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3 	ENST00000381213.3|MIER3|ENSG00000155545.15|mesoderm induction early response 1, family member 3
hg19_v2_chr3_-_118864893_118864915	0.120319	ACAUUCA	ENST00000354673.2|IGSF11|ENSG00000144847.8|immunoglobulin superfamily, member 11 	ENST00000425327.2|IGSF11|ENSG00000144847.8|immunoglobulin superfamily, member 11
hg19_v2_chrX_+_153665248_153665281	0.120299	ACAUUCA	ENST00000447750.2|GDI1|ENSG00000203879.7|GDP dissociation inhibitor 1
hg19_v2_chr1_-_228135599_228135640	0.119539	ACAUUCA	ENST00000272164.5|WNT9A|ENSG00000143816.7|wingless-type MMTV integration site family, member 9A
hg19_v2_chr11_-_61684962_61685063	0.11919	ACAUUCA	ENST00000394836.2|RAB3IL1|ENSG00000167994.7|RAB3A interacting protein (rabin3)-like 1
hg19_v2_chr2_+_30670077_30670125	0.118586	ACAUUCA	ENST00000466477.1|LCLAT1|ENSG00000172954.9|lysocardiolipin acyltransferase 1 	ENST00000465200.1|LCLAT1|ENSG00000172954.9|lysocardiolipin acyltransferase 1 	ENST00000379509.3|LCLAT1|ENSG00000172954.9|lysocardiolipin acyltransferase 1 	ENST00000319406.4|LCLAT1|ENSG00000172954.9|lysocardiolipin acyltransferase 1 	ENST00000488144.1|LCLAT1|ENSG00000172954.9|lysocardiolipin acyltransferase 1 	ENST00000465538.1|LCLAT1|ENSG00000172954.9|lysocardiolipin acyltransferase 1 	ENST00000309052.4|LCLAT1|ENSG00000172954.9|lysocardiolipin acyltransferase 1 	ENST00000359433.1|LCLAT1|ENSG00000172954.9|lysocardiolipin acyltransferase 1
hg19_v2_chr11_-_18656028_18656040	0.117526	ACAUUCA	ENST00000336349.5|SPTY2D1|ENSG00000179119.10|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)
hg19_v2_chr18_+_46065393_46065444	0.115582	ACAUUCA	ENST00000256413.3|CTIF|ENSG00000134030.9|CBP80/20-dependent translation initiation factor
hg19_v2_chr17_-_57970074_57970117	0.115026	ACAUUCA	ENST00000346141.6|TUBD1|ENSG00000108423.10|tubulin, delta 1
hg19_v2_chr3_+_186501336_186501386	0.114833	ACAUUCA	ENST00000323963.5|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2 	ENST00000440191.2|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2 	ENST00000356531.5|EIF4A2|ENSG00000156976.10|eukaryotic translation initiation factor 4A2
hg19_v2_chr12_+_54402790_54402832	0.114458	ACAUUCA	ENST00000040584.4|HOXC8|ENSG00000037965.4|homeobox C8
hg19_v2_chr13_-_77900814_77900935	0.113948	ACAUUCA	ENST00000544440.2|MYCBP2|ENSG00000005810.13|MYC binding protein 2, E3 ubiquitin protein ligase
hg19_v2_chr1_+_97187318_97187380	0.111485	ACAUUCA	ENST00000609116.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370198.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000370197.1|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000426398.2|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2 	ENST00000394184.3|PTBP2|ENSG00000117569.14|polypyrimidine tract binding protein 2
hg19_v2_chr17_-_66287257_66287276	0.107866	ACAUUCA	ENST00000327268.4|SLC16A6|ENSG00000108932.7|solute carrier family 16, member 6
hg19_v2_chr12_-_30848914_30848948	0.107142	ACAUUCA	ENST00000256079.4|IPO8|ENSG00000133704.5|importin 8
hg19_v2_chr17_+_2496971_2497040	0.105295	ACAUUCA	ENST00000397195.5|PAFAH1B1|ENSG00000007168.8|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
hg19_v2_chr2_+_112812778_112812800	0.102879	ACAUUCA	ENST00000283206.4|TMEM87B|ENSG00000153214.5|transmembrane protein 87B
hg19_v2_chr2_+_111878483_111878506	0.102624	ACAUUCA	ENST00000308659.8|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000357757.2|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000393253.2|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000337565.5|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator) 	ENST00000393256.3|BCL2L11|ENSG00000153094.17|BCL2-like 11 (apoptosis facilitator)
hg19_v2_chr5_+_140174429_140174550	0.102414	ACAUUCA	ENST00000520672.2|PCDHA2|ENSG00000204969.5|protocadherin alpha 2 	ENST00000378132.1|PCDHA2|ENSG00000204969.5|protocadherin alpha 2 	ENST00000526136.1|PCDHA2|ENSG00000204969.5|protocadherin alpha 2
hg19_v2_chr2_-_26101374_26101389	0.102209	ACAUUCA	ENST00000435504.4|ASXL2|ENSG00000143970.12|additional sex combs like 2 (Drosophila)
hg19_v2_chr3_-_24536253_24536328	0.0987229	ACAUUCA	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr3_+_45730733_45730773	0.0982614	ACAUUCA	ENST00000418611.1|SACM1L|ENSG00000211456.6|SAC1 suppressor of actin mutations 1-like (yeast) 	ENST00000389061.5|SACM1L|ENSG00000211456.6|SAC1 suppressor of actin mutations 1-like (yeast)
hg19_v2_chr10_+_104678032_104678094	0.0977482	ACAUUCA	ENST00000369878.4|CNNM2|ENSG00000148842.13|cyclin M2 	ENST00000369875.3|CNNM2|ENSG00000148842.13|cyclin M2
hg19_v2_chrX_-_153363188_153363212	0.0975998	ACAUUCA	ENST00000303391.6|MECP2|ENSG00000169057.15|methyl CpG binding protein 2 (Rett syndrome)
hg19_v2_chr10_+_98592009_98592061	0.0971907	ACAUUCA	ENST00000540664.1|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor 	ENST00000371103.3|LCOR|ENSG00000196233.7|ligand dependent nuclear receptor corepressor
hg19_v2_chr2_-_96931679_96931756	0.0941357	ACAUUCA	ENST00000258439.3|TMEM127|ENSG00000135956.4|transmembrane protein 127 	ENST00000432959.1|TMEM127|ENSG00000135956.4|transmembrane protein 127
hg19_v2_chr7_+_66205712_66205726	0.0934811	ACAUUCA	ENST00000451741.2|KCTD7|ENSG00000243335.4|potassium channel tetramerization domain containing 7 	ENST00000442563.1|RABGEF1|ENSG00000154710.11|RAB guanine nucleotide exchange factor (GEF) 1 	ENST00000450873.2|RABGEF1|ENSG00000154710.11|RAB guanine nucleotide exchange factor (GEF) 1 	ENST00000284957.5|RABGEF1|ENSG00000154710.11|RAB guanine nucleotide exchange factor (GEF) 1
hg19_v2_chr4_+_184020398_184020463	0.0929795	ACAUUCA	ENST00000403733.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2 	ENST00000378925.3|WWC2|ENSG00000151718.11|WW and C2 domain containing 2
hg19_v2_chr6_-_99873145_99873207	0.0916842	ACAUUCA	ENST00000369239.5|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein 	ENST00000438806.1|PNISR|ENSG00000132424.10|PNN-interacting serine/arginine-rich protein
hg19_v2_chr3_-_105587879_105587892	0.0913117	ACAUUCA	ENST00000264122.4|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000403724.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase 	ENST00000405772.1|CBLB|ENSG00000114423.14|Cbl proto-oncogene B, E3 ubiquitin protein ligase
hg19_v2_chr18_+_32073253_32073339	0.0909373	ACAUUCA	ENST00000283365.9|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000596745.1|DTNA|ENSG00000134769.17|dystrobrevin, alpha 	ENST00000315456.6|DTNA|ENSG00000134769.17|dystrobrevin, alpha
hg19_v2_chr10_+_31608054_31608156	0.0902524	ACAUUCA	ENST00000320985.10|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000361642.5|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000560721.2|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000558440.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000424869.1|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1 	ENST00000542815.3|ZEB1|ENSG00000148516.17|zinc finger E-box binding homeobox 1
hg19_v2_chr1_-_78225482_78225544	0.0899058	ACAUUCA	ENST00000524778.1|USP33|ENSG00000077254.10|ubiquitin specific peptidase 33 	ENST00000370794.3|USP33|ENSG00000077254.10|ubiquitin specific peptidase 33 	ENST00000370793.1|USP33|ENSG00000077254.10|ubiquitin specific peptidase 33 	ENST00000370792.3|USP33|ENSG00000077254.10|ubiquitin specific peptidase 33
hg19_v2_chr1_+_183441600_183441616	0.089596	ACAUUCA	ENST00000367537.3|SMG7|ENSG00000116698.16|SMG7 nonsense mediated mRNA decay factor
hg19_v2_chr15_-_65670360_65670378	0.0889261	ACAUUCA	ENST00000327987.4|IGDCC3|ENSG00000174498.9|immunoglobulin superfamily, DCC subclass, member 3
hg19_v2_chr1_-_109506036_109506129	0.0875024	ACAUUCA	ENST00000369976.1|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1 	ENST00000356970.2|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1 	ENST00000357393.4|AKNAD1|ENSG00000162641.14|AKNA domain containing 1 	ENST00000369971.2|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1 	ENST00000415331.1|CLCC1|ENSG00000121940.11|chloride channel CLIC-like 1
hg19_v2_chr3_+_88188254_88188254	0.0869598	ACAUUCA	ENST00000309495.5|ZNF654|ENSG00000175105.5|zinc finger protein 654
hg19_v2_chr4_-_40631859_40631889	0.0867841	ACAUUCA	ENST00000295971.7|RBM47|ENSG00000163694.10|RNA binding motif protein 47 	ENST00000319592.4|RBM47|ENSG00000163694.10|RNA binding motif protein 47
hg19_v2_chr2_-_198540719_198540748	0.0863659	ACAUUCA	ENST00000295049.4|RFTN2|ENSG00000162944.6|raftlin family member 2
hg19_v2_chr1_-_205719295_205719404	0.0848408	ACAUUCA	ENST00000367142.4|NUCKS1|ENSG00000069275.12|nuclear casein kinase and cyclin-dependent kinase substrate 1
hg19_v2_chr7_-_37956409_37956517	0.0847976	ACAUUCA	ENST00000436072.2|SFRP4|ENSG00000106483.7|secreted frizzled-related protein 4
hg19_v2_chr12_+_120875910_120876001	0.0845776	ACAUUCA	ENST00000551806.1|AL021546.6|ENSG00000111780.8|Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial
hg19_v2_chr1_+_203274639_203274664	0.0830592	ACAUUCA	ENST00000290551.4|BTG2|ENSG00000159388.5|BTG family, member 2
hg19_v2_chr7_+_104654623_104654669	0.0826877	ACAUUCA	ENST00000311117.3|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000334877.4|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000257745.4|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000334914.7|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000478990.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000495267.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E 	ENST00000476671.1|KMT2E|ENSG00000005483.15|lysine (K)-specific methyltransferase 2E
hg19_v2_chr1_+_100435315_100435345	0.0819143	ACAUUCA	ENST00000370155.3|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3 	ENST00000465289.1|SLC35A3|ENSG00000117620.8|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3
hg19_v2_chr10_-_48055018_48055018	0.0815461	ACAUUCA	ENST00000426610.2|ASAH2C|ENSG00000072444.10|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2C
hg19_v2_chr17_+_73452545_73452685	0.0800195	ACAUUCA	ENST00000314256.7|KIAA0195|ENSG00000177728.10|KIAA0195
hg19_v2_chrX_+_21392873_21392980	0.0794069	ACAUUCA	ENST00000379510.3|CNKSR2|ENSG00000149970.10|connector enhancer of kinase suppressor of Ras 2
hg19_v2_chr18_+_29598335_29598428	0.0789408	ACAUUCA	ENST00000217740.3|RNF125|ENSG00000101695.4|ring finger protein 125, E3 ubiquitin protein ligase
hg19_v2_chr15_-_34502278_34502318	0.0786748	ACAUUCA	ENST00000559515.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000256544.3|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000560108.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1 	ENST00000559462.1|KATNBL1|ENSG00000134152.6|katanin p80 subunit B-like 1
hg19_v2_chr13_-_76056250_76056280	0.0776668	ACAUUCA	ENST00000377636.3|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000431480.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000377625.2|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4 	ENST00000425511.1|TBC1D4|ENSG00000136111.8|TBC1 domain family, member 4
hg19_v2_chr12_+_110719032_110719113	0.0775392	ACAUUCA	ENST00000395494.2|ATP2A2|ENSG00000174437.12|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2
hg19_v2_chr16_-_17564738_17564834	0.0765149	ACAUUCA	ENST00000261381.6|XYLT1|ENSG00000103489.7|xylosyltransferase I
hg19_v2_chr13_-_31038370_31038509	0.0752408	ACAUUCA	ENST00000399489.1|HMGB1|ENSG00000189403.10|high mobility group box 1 	ENST00000339872.4|HMGB1|ENSG00000189403.10|high mobility group box 1
hg19_v2_chr7_-_80548667_80548688	0.0739558	ACAUUCA	ENST00000265361.3|SEMA3C|ENSG00000075223.9|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C
hg19_v2_chr8_-_134115118_134115298	0.073352	ACAUUCA	ENST00000395352.3|SLA|ENSG00000155926.9|Src-like-adaptor 	ENST00000338087.5|SLA|ENSG00000155926.9|Src-like-adaptor
hg19_v2_chr4_+_56815102_56815147	0.0733196	ACAUUCA	ENST00000257287.4|CEP135|ENSG00000174799.6|centrosomal protein 135kDa
hg19_v2_chr19_-_4066890_4066943	0.0731428	ACAUUCA	ENST00000322357.4|ZBTB7A|ENSG00000178951.4|zinc finger and BTB domain containing 7A
hg19_v2_chr10_-_98945677_98945729	0.0724264	ACAUUCA	ENST00000266058.4|SLIT1|ENSG00000187122.12|slit homolog 1 (Drosophila) 	ENST00000371041.3|SLIT1|ENSG00000187122.12|slit homolog 1 (Drosophila)
hg19_v2_chr10_-_61666267_61666414	0.0722446	ACAUUCA	ENST00000263102.6|CCDC6|ENSG00000108091.10|coiled-coil domain containing 6
hg19_v2_chrX_-_73834449_73834481	0.0689459	ACAUUCA	ENST00000332687.6|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting 	ENST00000349225.2|RLIM|ENSG00000131263.8|ring finger protein, LIM domain interacting
hg19_v2_chrX_-_153151586_153151644	0.0687126	ACAUUCA	ENST00000370060.1|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000370055.1|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule 	ENST00000420165.1|L1CAM|ENSG00000198910.8|L1 cell adhesion molecule
hg19_v2_chrX_+_24167746_24167811	0.0678607	ACAUUCA	ENST00000428571.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked 	ENST00000539115.1|ZFX|ENSG00000005889.11|zinc finger protein, X-linked
hg19_v2_chr1_-_39347255_39347303	0.0674162	ACAUUCA	ENST00000454994.2|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa 	ENST00000357771.3|GJA9|ENSG00000131233.8|gap junction protein, alpha 9, 59kDa
hg19_v2_chr9_-_138799070_138799284	0.0673914	ACAUUCA	ENST00000389532.4|CAMSAP1|ENSG00000130559.14|calmodulin regulated spectrin-associated protein 1 	ENST00000409386.3|CAMSAP1|ENSG00000130559.14|calmodulin regulated spectrin-associated protein 1
hg19_v2_chr12_-_122907091_122907186	0.0673302	ACAUUCA	ENST00000358808.2|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1 	ENST00000361654.4|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1 	ENST00000539080.1|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1 	ENST00000537178.1|CLIP1|ENSG00000130779.15|CAP-GLY domain containing linker protein 1
hg19_v2_chr13_+_97874574_97874609	0.0668761	ACAUUCA	ENST00000343600.4|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2 	ENST00000345429.6|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2 	ENST00000376673.3|MBNL2|ENSG00000139793.14|muscleblind-like splicing regulator 2
hg19_v2_chr3_+_14989076_14989113	0.0666586	ACAUUCA	ENST00000413118.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2 	ENST00000425241.1|NR2C2|ENSG00000177463.11|nuclear receptor subfamily 2, group C, member 2
hg19_v2_chr9_+_133569108_133569193	0.0663774	ACAUUCA	ENST00000372358.5|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000546165.1|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000372352.3|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000372351.3|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000372350.3|EXOSC2|ENSG00000130713.11|exosome component 2 	ENST00000495699.2|EXOSC2|ENSG00000130713.11|exosome component 2
hg19_v2_chr14_+_53019822_53019873	0.0659368	ACAUUCA	ENST00000321662.6|GPR137C|ENSG00000180998.7|G protein-coupled receptor 137C
hg19_v2_chr20_-_4804244_4804293	0.0636837	ACAUUCA	ENST00000379400.3|RASSF2|ENSG00000101265.11|Ras association (RalGDS/AF-6) domain family member 2
hg19_v2_chr4_+_141294628_141294821	0.0627834	ACAUUCA	ENST00000512749.1|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000608372.1|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000506597.1|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000394201.4|SCOC|ENSG00000153130.13|short coiled-coil protein 	ENST00000510586.1|SCOC|ENSG00000153130.13|short coiled-coil protein
hg19_v2_chrX_-_83442915_83442985	0.0613642	ACAUUCA	ENST00000262752.2|RPS6KA6|ENSG00000072133.6|ribosomal protein S6 kinase, 90kDa, polypeptide 6 	ENST00000543399.1|RPS6KA6|ENSG00000072133.6|ribosomal protein S6 kinase, 90kDa, polypeptide 6
hg19_v2_chr17_-_5389477_5389537	0.0611272	ACAUUCA	ENST00000572834.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000570848.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000571971.1|DERL2|ENSG00000072849.6|derlin 2 	ENST00000158771.4|DERL2|ENSG00000072849.6|derlin 2
hg19_v2_chr2_-_206950781_206950947	0.0609339	ACAUUCA	ENST00000403263.1|INO80D|ENSG00000114933.11|INO80 complex subunit D
hg19_v2_chr2_-_158485387_158485517	0.0600587	ACAUUCA	ENST00000243349.8|ACVR1C|ENSG00000123612.11|activin A receptor, type IC
hg19_v2_chr13_+_113344542_113344643	0.0600442	ACAUUCA	ENST00000487903.1|ATP11A|ENSG00000068650.14|ATPase, class VI, type 11A 	ENST00000375630.2|ATP11A|ENSG00000068650.14|ATPase, class VI, type 11A 	ENST00000375645.3|ATP11A|ENSG00000068650.14|ATPase, class VI, type 11A 	ENST00000283558.8|ATP11A|ENSG00000068650.14|ATPase, class VI, type 11A
hg19_v2_chr2_-_47798044_47798132	0.0594927	ACAUUCA	ENST00000327876.4|KCNK12|ENSG00000184261.4|potassium channel, subfamily K, member 12
hg19_v2_chr2_+_32502952_32503025	0.0586758	ACAUUCA	ENST00000238831.4|YIPF4|ENSG00000119820.6|Yip1 domain family, member 4
hg19_v2_chr6_+_124125286_124125362	0.0581796	ACAUUCA	ENST00000368416.1|NKAIN2|ENSG00000188580.9|Na+/K+ transporting ATPase interacting 2 	ENST00000368417.1|NKAIN2|ENSG00000188580.9|Na+/K+ transporting ATPase interacting 2 	ENST00000546092.1|NKAIN2|ENSG00000188580.9|Na+/K+ transporting ATPase interacting 2
hg19_v2_chr2_-_98612350_98612363	0.058171	ACAUUCA	ENST00000186436.5|TMEM131|ENSG00000075568.12|transmembrane protein 131
hg19_v2_chr12_+_67663056_67663067	0.0571527	ACAUUCA	ENST00000545606.1|CAND1|ENSG00000111530.8|cullin-associated and neddylation-dissociated 1
hg19_v2_chr15_-_78369994_78370069	0.0570936	ACAUUCA	ENST00000300584.3|TBC1D2B|ENSG00000167202.7|TBC1 domain family, member 2B 	ENST00000409931.3|TBC1D2B|ENSG00000167202.7|TBC1 domain family, member 2B
hg19_v2_chrX_-_74145273_74145319	0.0560242	ACAUUCA	ENST00000055682.6|KIAA2022|ENSG00000050030.9|KIAA2022
hg19_v2_chr5_+_161274685_161274747	0.0559089	ACAUUCA	ENST00000428797.2|GABRA1|ENSG00000022355.10|gamma-aminobutyric acid (GABA) A receptor, alpha 1
hg19_v2_chr1_+_202317815_202317854	0.0546746	ACAUUCA	ENST00000608999.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000336894.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000480184.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr12_-_93835665_93835750	0.0545252	ACAUUCA	ENST00000552442.1|UBE2N|ENSG00000177889.5|ubiquitin-conjugating enzyme E2N 	ENST00000550657.1|UBE2N|ENSG00000177889.5|ubiquitin-conjugating enzyme E2N
hg19_v2_chr9_-_127952032_127952098	0.0542646	ACAUUCA	ENST00000456642.1|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373546.3|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit 	ENST00000373547.4|PPP6C|ENSG00000119414.7|protein phosphatase 6, catalytic subunit
hg19_v2_chr12_-_96794143_96794264	0.0542541	ACAUUCA	ENST00000543119.2|CDK17|ENSG00000059758.3|cyclin-dependent kinase 17
hg19_v2_chr12_-_25403737_25403881	0.0534517	ACAUUCA	ENST00000256078.4|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000556131.1|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000311936.3|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog 	ENST00000557334.1|KRAS|ENSG00000133703.7|Kirsten rat sarcoma viral oncogene homolog
hg19_v2_chr1_-_37499726_37499850	0.053047	ACAUUCA	ENST00000373091.3|GRIK3|ENSG00000163873.5|glutamate receptor, ionotropic, kainate 3 	ENST00000373093.4|GRIK3|ENSG00000163873.5|glutamate receptor, ionotropic, kainate 3
hg19_v2_chr21_-_36260980_36261011	0.0523877	ACAUUCA	ENST00000344691.4|RUNX1|ENSG00000159216.14|runt-related transcription factor 1 	ENST00000358356.5|RUNX1|ENSG00000159216.14|runt-related transcription factor 1
hg19_v2_chr17_-_77813186_77813249	0.0519801	ACAUUCA	ENST00000448310.1|CBX4|ENSG00000141582.10|chromobox homolog 4 	ENST00000269397.4|CBX4|ENSG00000141582.10|chromobox homolog 4
hg19_v2_chr21_-_28338732_28338832	0.0500887	ACAUUCA	ENST00000284987.5|ADAMTS5|ENSG00000154736.5|ADAM metallopeptidase with thrombospondin type 1 motif, 5
hg19_v2_chr4_-_79860506_79860600	0.0490262	ACAUUCA	ENST00000295462.3|PAQR3|ENSG00000163291.10|progestin and adipoQ receptor family member III 	ENST00000380645.4|PAQR3|ENSG00000163291.10|progestin and adipoQ receptor family member III 	ENST00000512733.1|PAQR3|ENSG00000163291.10|progestin and adipoQ receptor family member III
hg19_v2_chr16_-_71843047_71843104	0.0469396	ACAUUCA	ENST00000299980.4|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit 	ENST00000393512.3|AP1G1|ENSG00000166747.8|adaptor-related protein complex 1, gamma 1 subunit
hg19_v2_chr4_-_100867864_100867889	0.0461898	ACAUUCA	ENST00000442697.2|DNAJB14|ENSG00000164031.12|DnaJ (Hsp40) homolog, subfamily B, member 14
hg19_v2_chr5_+_140201183_140201361	0.0458111	ACAUUCA	ENST00000529619.1|PCDHA5|ENSG00000204965.4|protocadherin alpha 5 	ENST00000529859.1|PCDHA5|ENSG00000204965.4|protocadherin alpha 5 	ENST00000378126.3|PCDHA5|ENSG00000204965.4|protocadherin alpha 5
hg19_v2_chr9_+_131799213_131799274	0.0450705	ACAUUCA	ENST00000358369.4|FAM73B|ENSG00000148343.14|family with sequence similarity 73, member B 	ENST00000406926.2|FAM73B|ENSG00000148343.14|family with sequence similarity 73, member B 	ENST00000277475.5|FAM73B|ENSG00000148343.14|family with sequence similarity 73, member B 	ENST00000450073.1|FAM73B|ENSG00000148343.14|family with sequence similarity 73, member B
hg19_v2_chr2_+_157291953_157292003	0.0447632	ACAUUCA	ENST00000310454.6|GPD2|ENSG00000115159.11|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)
hg19_v2_chr19_-_42759300_42759324	0.0443494	ACAUUCA	ENST00000222329.4|ERF|ENSG00000105722.5|Ets2 repressor factor
hg19_v2_chr4_+_3076388_3076431	0.0424254	ACAUUCA	ENST00000355072.5|HTT|ENSG00000197386.6|huntingtin
hg19_v2_chr3_-_53925863_53926015	0.0424162	ACAUUCA	ENST00000541726.1|SELK|ENSG00000113811.6|Selenoprotein K  	ENST00000495461.1|SELK|ENSG00000113811.6|Selenoprotein K
hg19_v2_chr5_-_98262240_98262240	0.0421088	ACAUUCA	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr11_+_33278811_33279133	0.0420767	ACAUUCA	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr19_-_38146289_38146401	0.0411241	ACAUUCA	ENST00000392144.1|ZFP30|ENSG00000120784.11|ZFP30 zinc finger protein 	ENST00000591444.1|ZFP30|ENSG00000120784.11|ZFP30 zinc finger protein 	ENST00000351218.2|ZFP30|ENSG00000120784.11|ZFP30 zinc finger protein 	ENST00000587809.1|ZFP30|ENSG00000120784.11|ZFP30 zinc finger protein
hg19_v2_chr6_+_13925098_13925163	0.0399853	ACAUUCA	ENST00000488300.1|RNF182|ENSG00000180537.8|ring finger protein 182 	ENST00000544682.1|RNF182|ENSG00000180537.8|ring finger protein 182 	ENST00000420478.2|RNF182|ENSG00000180537.8|ring finger protein 182
hg19_v2_chr5_+_112849373_112849416	0.0389962	ACAUUCA	ENST00000161863.4|YTHDC2|ENSG00000047188.11|YTH domain containing 2 	ENST00000515883.1|YTHDC2|ENSG00000047188.11|YTH domain containing 2
hg19_v2_chr8_+_62200509_62200590	0.0389099	ACAUUCA	ENST00000519846.1|CLVS1|ENSG00000177182.6|clavesin 1 	ENST00000518592.1|CLVS1|ENSG00000177182.6|clavesin 1 	ENST00000325897.4|CLVS1|ENSG00000177182.6|clavesin 1
hg19_v2_chr6_-_85474219_85474237	0.0381176	ACAUUCA	ENST00000369663.5|TBX18|ENSG00000112837.12|T-box 18
hg19_v2_chr3_-_50540854_50540887	0.0373996	ACAUUCA	ENST00000423994.2|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2 	ENST00000424201.2|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2 	ENST00000479441.1|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2 	ENST00000429770.1|CACNA2D2|ENSG00000007402.7|calcium channel, voltage-dependent, alpha 2/delta subunit 2
hg19_v2_chr14_-_64010046_64010107	0.0373092	ACAUUCA	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr10_+_64564469_64564535	0.0365286	ACAUUCA	ENST00000373783.1|ADO|ENSG00000181915.3|2-aminoethanethiol (cysteamine) dioxygenase
hg19_v2_chr1_+_186798073_186798147	0.0364113	ACAUUCA	ENST00000367466.3|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent) 	ENST00000442353.2|PLA2G4A|ENSG00000116711.8|phospholipase A2, group IVA (cytosolic, calcium-dependent)
hg19_v2_chr22_+_42372931_42372947	0.0363544	ACAUUCA	ENST00000328414.8|SEPT3|ENSG00000100167.15|septin 3 	ENST00000396425.3|SEPT3|ENSG00000100167.15|septin 3
hg19_v2_chr11_-_82782861_82782949	0.0362575	ACAUUCA	ENST00000524635.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000526205.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000527633.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533486.1|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family 	ENST00000533276.2|RAB30|ENSG00000137502.5|RAB30, member RAS oncogene family
hg19_v2_chr12_-_54673871_54673925	0.0362034	ACAUUCA	ENST00000209875.4|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr5_+_65018017_65018088	0.0351099	ACAUUCA	ENST00000380985.5|NLN|ENSG00000123213.18|neurolysin (metallopeptidase M3 family) 	ENST00000502464.1|NLN|ENSG00000123213.18|neurolysin (metallopeptidase M3 family)
hg19_v2_chr9_-_86595503_86595569	0.0349495	ACAUUCA	ENST00000376281.4|HNRNPK|ENSG00000165119.14|heterogeneous nuclear ribonucleoprotein K 	ENST00000376264.2|HNRNPK|ENSG00000165119.14|heterogeneous nuclear ribonucleoprotein K
hg19_v2_chr19_-_40562063_40562143	0.0347528	ACAUUCA	ENST00000598845.1|ZNF780B|ENSG00000128000.11|zinc finger protein 780B 	ENST00000593605.1|ZNF780B|ENSG00000128000.11|zinc finger protein 780B 	ENST00000221355.6|ZNF780B|ENSG00000128000.11|zinc finger protein 780B 	ENST00000434248.1|ZNF780B|ENSG00000128000.11|zinc finger protein 780B
hg19_v2_chr12_+_70636765_70636817	0.0329995	ACAUUCA	ENST00000552231.1|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000229195.3|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000547780.1|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2 	ENST00000418359.3|CNOT2|ENSG00000111596.7|CCR4-NOT transcription complex, subunit 2
hg19_v2_chr1_-_211752073_211752084	0.0324845	ACAUUCA	ENST00000367001.4|SLC30A1|ENSG00000170385.9|solute carrier family 30 (zinc transporter), member 1
hg19_v2_chr3_+_77088989_77089037	0.0307322	ACAUUCA	ENST00000461745.1|ROBO2|ENSG00000185008.13|roundabout, axon guidance receptor, homolog 2 (Drosophila)
hg19_v2_chr4_-_74486217_74486273	0.030254	ACAUUCA	ENST00000335049.5|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6 	ENST00000307439.5|RASSF6|ENSG00000169435.9|Ras association (RalGDS/AF-6) domain family member 6
hg19_v2_chr12_+_95867727_95867874	0.0296311	ACAUUCA	ENST00000323666.5|METAP2|ENSG00000111142.9|methionyl aminopeptidase 2 	ENST00000546753.1|METAP2|ENSG00000111142.9|methionyl aminopeptidase 2
hg19_v2_chr5_-_137090028_137090075	0.0290943	ACAUUCA	ENST00000314940.4|HNRNPA0|ENSG00000177733.4|heterogeneous nuclear ribonucleoprotein A0
hg19_v2_chr15_+_64680003_64680063	0.0289879	ACAUUCA	ENST00000261884.3|TRIP4|ENSG00000103671.5|thyroid hormone receptor interactor 4
hg19_v2_chr9_-_74980113_74980163	0.0276832	ACAUUCA	ENST00000376962.5|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000376960.4|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5 	ENST00000237937.3|ZFAND5|ENSG00000107372.8|zinc finger, AN1-type domain 5
hg19_v2_chr4_-_142053952_142053996	0.0271705	ACAUUCA	ENST00000515673.2|RNF150|ENSG00000170153.6|ring finger protein 150
hg19_v2_chr2_-_176032843_176032941	0.0271593	ACAUUCA	ENST00000392544.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000409499.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000426833.3|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000392543.2|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000538946.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000487334.2|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000409833.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000409635.1|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000264110.2|ATF2|ENSG00000115966.12|activating transcription factor 2 	ENST00000345739.5|ATF2|ENSG00000115966.12|activating transcription factor 2
hg19_v2_chr1_+_89149905_89149995	0.0270249	ACAUUCA	ENST00000316005.7|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370521.3|PKN2|ENSG00000065243.14|protein kinase N2 	ENST00000370505.3|PKN2|ENSG00000065243.14|protein kinase N2
hg19_v2_chr13_-_28194541_28194652	0.0267347	ACAUUCA	ENST00000316334.3|LNX2|ENSG00000139517.6|ligand of numb-protein X 2
hg19_v2_chr17_+_57297807_57297923	0.0259016	ACAUUCA	ENST00000284116.4|GDPD1|ENSG00000153982.6|glycerophosphodiester phosphodiesterase domain containing 1 	ENST00000581140.1|GDPD1|ENSG00000153982.6|glycerophosphodiester phosphodiesterase domain containing 1 	ENST00000581276.1|GDPD1|ENSG00000153982.6|glycerophosphodiester phosphodiesterase domain containing 1
hg19_v2_chr5_-_131132658_131132719	0.0237566	ACAUUCA	ENST00000514667.1|CTC-432M15.3|ENSG00000273217.1|Folliculin-interacting protein 1  	ENST00000511848.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1 	ENST00000510461.1|FNIP1|ENSG00000217128.7|folliculin interacting protein 1
hg19_v2_chr6_+_73331776_73331809	0.0231948	ACAUUCA	ENST00000370398.1|KCNQ5|ENSG00000185760.11|potassium voltage-gated channel, KQT-like subfamily, member 5
hg19_v2_chr1_+_110009215_110009250	0.0225877	ACAUUCA	ENST00000369872.3|SYPL2|ENSG00000143028.7|synaptophysin-like 2
hg19_v2_chr5_+_148960931_148961073	0.0225237	ACAUUCA	ENST00000333677.6|ARHGEF37|ENSG00000183111.7|Rho guanine nucleotide exchange factor (GEF) 37
hg19_v2_chr1_-_43855479_43855486	0.0220939	ACAUUCA	ENST00000290663.6|MED8|ENSG00000159479.12|mediator complex subunit 8 	ENST00000372457.4|MED8|ENSG00000159479.12|mediator complex subunit 8
hg19_v2_chr17_+_43224684_43224684	0.0219892	ACAUUCA	ENST00000332499.2|HEXIM1|ENSG00000186834.2|hexamethylene bis-acetamide inducible 1
hg19_v2_chr1_-_232697304_232697304	0.0216565	ACAUUCA	ENST00000366630.1|SIPA1L2|ENSG00000116991.6|signal-induced proliferation-associated 1 like 2
hg19_v2_chr7_+_30323923_30324060	0.0197245	ACAUUCA	ENST00000323037.4|ZNRF2|ENSG00000180233.9|zinc and ring finger 2
hg19_v2_chr4_+_1283639_1283705	0.018907	ACAUUCA	ENST00000303400.4|MAEA|ENSG00000090316.11|macrophage erythroblast attacher 	ENST00000505177.2|MAEA|ENSG00000090316.11|macrophage erythroblast attacher 	ENST00000503653.1|MAEA|ENSG00000090316.11|macrophage erythroblast attacher 	ENST00000264750.6|MAEA|ENSG00000090316.11|macrophage erythroblast attacher 	ENST00000502558.1|MAEA|ENSG00000090316.11|macrophage erythroblast attacher 	ENST00000452175.2|MAEA|ENSG00000090316.11|macrophage erythroblast attacher 	ENST00000514708.1|MAEA|ENSG00000090316.11|macrophage erythroblast attacher
hg19_v2_chr6_-_100912785_100912822	0.0179972	ACAUUCA	ENST00000369208.3|SIM1|ENSG00000112246.5|single-minded family bHLH transcription factor 1
hg19_v2_chr2_-_201936302_201936416	0.0175469	ACAUUCA	ENST00000453765.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000452799.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000446678.1|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B 	ENST00000418596.3|FAM126B|ENSG00000155744.5|family with sequence similarity 126, member B
hg19_v2_chr14_+_74318513_74318562	0.0168047	ACAUUCA	ENST00000555228.1|PTGR2|ENSG00000140043.7|prostaglandin reductase 2 	ENST00000555661.1|PTGR2|ENSG00000140043.7|prostaglandin reductase 2
hg19_v2_chr11_-_124543725_124543777	0.0160489	ACAUUCA	ENST00000545756.1|SIAE|ENSG00000110013.8|sialic acid acetylesterase 	ENST00000263593.3|SIAE|ENSG00000110013.8|sialic acid acetylesterase
hg19_v2_chr10_-_27149792_27149850	0.015608	ACAUUCA	ENST00000376140.3|ABI1|ENSG00000136754.12|abl-interactor 1 	ENST00000376170.4|ABI1|ENSG00000136754.12|abl-interactor 1
hg19_v2_chr1_+_171454659_171454723	0.013344	ACAUUCA	ENST00000367742.3|PRRC2C|ENSG00000117523.11|proline-rich coiled-coil 2C 	ENST00000338920.4|PRRC2C|ENSG00000117523.11|proline-rich coiled-coil 2C
hg19_v2_chr3_-_171178157_171178225	0.0131807	ACAUUCA	ENST00000465393.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000436636.2|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000369326.5|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000538048.1|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase 	ENST00000341852.6|TNIK|ENSG00000154310.12|TRAF2 and NCK interacting kinase
hg19_v2_chr10_-_30348439_30348531	0.0128554	ACAUUCA	ENST00000375377.1|KIAA1462|ENSG00000165757.8|KIAA1462
hg19_v2_chr20_-_9819479_9819532	0.0113312	ACAUUCA	ENST00000378423.1|PAK7|ENSG00000101349.12|p21 protein (Cdc42/Rac)-activated kinase 7 	ENST00000353224.5|PAK7|ENSG00000101349.12|p21 protein (Cdc42/Rac)-activated kinase 7
hg19_v2_chr1_-_156051789_156051838	0.0112465	ACAUUCA	ENST00000532414.2|MEX3A|ENSG00000254726.2|mex-3 RNA binding family member A
hg19_v2_chr5_-_54281491_54281517	0.00975705	ACAUUCA	ENST00000381405.4|ESM1|ENSG00000164283.8|endothelial cell-specific molecule 1
hg19_v2_chr8_-_59572301_59572435	0.00970868	ACAUUCA	ENST00000038176.3|NSMAF|ENSG00000035681.3|neutral sphingomyelinase (N-SMase) activation associated factor
hg19_v2_chr1_-_63153944_63154110	0.00887709	ACAUUCA	ENST00000340370.5|DOCK7|ENSG00000116641.11|dedicator of cytokinesis 7 	ENST00000404627.2|DOCK7|ENSG00000116641.11|dedicator of cytokinesis 7 	ENST00000251157.5|DOCK7|ENSG00000116641.11|dedicator of cytokinesis 7
hg19_v2_chr12_+_121124599_121124672	0.00815143	ACAUUCA	ENST00000228506.3|MLEC|ENSG00000110917.3|malectin
hg19_v2_chr14_-_27066636_27066701	0.00748634	ACAUUCA	ENST00000267422.7|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000344429.5|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000574031.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000465357.2|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1 	ENST00000547619.1|NOVA1|ENSG00000139910.15|neuro-oncological ventral antigen 1
hg19_v2_chr2_+_166326157_166326216	0.00620982	ACAUUCA	ENST00000421875.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000314499.7|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3 	ENST00000409664.1|CSRNP3|ENSG00000178662.11|cysteine-serine-rich nuclear protein 3
hg19_v2_chr4_-_42659102_42659161	0.00565879	ACAUUCA	ENST00000264449.10|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000510289.1|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 	ENST00000381668.5|ATP8A1|ENSG00000124406.12|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
hg19_v2_chr16_-_1464688_1464752	0.00535588	ACAUUCA	ENST00000389221.4|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000508903.2|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000397462.1|UNKL|ENSG00000059145.14|unkempt family zinc finger-like 	ENST00000301712.5|UNKL|ENSG00000059145.14|unkempt family zinc finger-like
hg19_v2_chr15_+_89346657_89346674	0.00470677	ACAUUCA	ENST00000439576.2|ACAN|ENSG00000157766.11|aggrecan
hg19_v2_chr10_-_119806085_119806114	0.00284565	ACAUUCA	ENST00000355624.3|RAB11FIP2|ENSG00000107560.6|RAB11 family interacting protein 2 (class I)
hg19_v2_chr8_-_124054587_124054663	0.00239306	ACAUUCA	ENST00000259512.4|DERL1|ENSG00000136986.5|derlin 1
hg19_v2_chr19_+_37862054_37862110	0.00130553	ACAUUCA	ENST00000483919.1|ZNF527|ENSG00000189164.10|zinc finger protein 527 	ENST00000588911.1|ZNF527|ENSG00000189164.10|zinc finger protein 527 	ENST00000436120.2|ZNF527|ENSG00000189164.10|zinc finger protein 527 	ENST00000587349.1|ZNF527|ENSG00000189164.10|zinc finger protein 527
hg19_v2_chr11_+_31531291_31531345	0.000481922	ACAUUCA	ENST00000350638.5|ELP4|ENSG00000109911.13|elongator acetyltransferase complex subunit 4 	ENST00000379163.5|ELP4|ENSG00000109911.13|elongator acetyltransferase complex subunit 4 	ENST00000395934.2|ELP4|ENSG00000109911.13|elongator acetyltransferase complex subunit 4
