hg19_v2_chr7_+_5632436_5632454	4.14008	AAUACUG	ENST00000340250.6|FSCN1|ENSG00000075618.13|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus) 	ENST00000382361.3|FSCN1|ENSG00000075618.13|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)
hg19_v2_chrX_+_64887512_64887537	3.88441	AAUACUG	ENST00000360270.5|MSN|ENSG00000147065.12|moesin
hg19_v2_chr10_+_102106829_102106881	3.71735	AAUACUG	ENST00000370355.2|SCD|ENSG00000099194.5|stearoyl-CoA desaturase (delta-9-desaturase)
hg19_v2_chr6_-_30654977_30655009	3.43696	AAUACUG	ENST00000399199.3|PPP1R18|ENSG00000146112.7|protein phosphatase 1, regulatory subunit 18
hg19_v2_chr7_-_41742697_41742714	3.4362	AAUACUG	ENST00000242208.4|INHBA|ENSG00000122641.9|inhibin, beta A
hg19_v2_chr2_+_210444142_210444194	2.79825	AAUACUG	ENST00000360351.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2 	ENST00000361559.4|MAP2|ENSG00000078018.15|microtubule-associated protein 2
hg19_v2_chr7_+_36429409_36429420	2.51652	AAUACUG	ENST00000265748.2|ANLN|ENSG00000011426.6|anillin, actin binding protein
hg19_v2_chr13_-_30881621_30881675	2.44727	AAUACUG	ENST00000380615.3|KATNAL1|ENSG00000102781.9|katanin p60 subunit A-like 1
hg19_v2_chr9_+_34990219_34990312	2.34455	AAUACUG	ENST00000541010.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000454002.2|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5 	ENST00000545841.1|DNAJB5|ENSG00000137094.10|DnaJ (Hsp40) homolog, subfamily B, member 5
hg19_v2_chr12_+_1800179_1800250	2.28481	AAUACUG	ENST00000357103.4|ADIPOR2|ENSG00000006831.9|adiponectin receptor 2
hg19_v2_chr21_-_16437255_16437340	2.2286	AAUACUG	ENST00000400199.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1 	ENST00000400202.1|NRIP1|ENSG00000180530.5|nuclear receptor interacting protein 1
hg19_v2_chr1_+_182992545_182992630	2.21841	AAUACUG	ENST00000258341.4|LAMC1|ENSG00000135862.5|laminin, gamma 1 (formerly LAMB2)
hg19_v2_chr1_+_84543734_84543775	2.15884	AAUACUG	ENST00000370689.2|PRKACB|ENSG00000142875.15|protein kinase, cAMP-dependent, catalytic, beta
hg19_v2_chr18_-_21166841_21166864	2.0874	AAUACUG	ENST00000269228.5|NPC1|ENSG00000141458.8|Niemann-Pick disease, type C1
hg19_v2_chr2_+_11886710_11886776	1.92762	AAUACUG	ENST00000256720.2|LPIN1|ENSG00000134324.7|lipin 1 	ENST00000441684.1|LPIN1|ENSG00000134324.7|lipin 1 	ENST00000423495.1|LPIN1|ENSG00000134324.7|lipin 1
hg19_v2_chr1_+_178694300_178694346	1.87325	AAUACUG	ENST00000367635.3|RALGPS2|ENSG00000116191.13|Ral GEF with PH domain and SH3 binding motif 2
hg19_v2_chr11_-_119599794_119599857	1.84921	AAUACUG	ENST00000264025.3|PVRL1|ENSG00000110400.6|poliovirus receptor-related 1 (herpesvirus entry mediator C)
hg19_v2_chr3_-_98620500_98620547	1.82015	AAUACUG	ENST00000326840.6|DCBLD2|ENSG00000057019.11|discoidin, CUB and LCCL domain containing 2
hg19_v2_chr1_+_201252580_201252640	1.7634	AAUACUG	ENST00000367324.3|PKP1|ENSG00000081277.7|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome) 	ENST00000263946.3|PKP1|ENSG00000081277.7|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)
hg19_v2_chr14_-_35182994_35183034	1.73666	AAUACUG	ENST00000341223.3|CFL2|ENSG00000165410.10|cofilin 2 (muscle)
hg19_v2_chr7_-_28220354_28220441	1.70178	AAUACUG	ENST00000283928.5|JAZF1|ENSG00000153814.7|JAZF zinc finger 1
hg19_v2_chr5_-_112630598_112630689	1.67478	AAUACUG	ENST00000302475.4|MCC|ENSG00000171444.13|mutated in colorectal cancers
hg19_v2_chr2_-_9143786_9143942	1.66887	AAUACUG	ENST00000462696.1|MBOAT2|ENSG00000143797.7|membrane bound O-acyltransferase domain containing 2 	ENST00000305997.3|MBOAT2|ENSG00000143797.7|membrane bound O-acyltransferase domain containing 2
hg19_v2_chr17_-_76870222_76870242	1.60825	AAUACUG	ENST00000585421.1|TIMP2|ENSG00000035862.8|TIMP metallopeptidase inhibitor 2
hg19_v2_chr9_+_112810878_112810985	1.58623	AAUACUG	ENST00000434623.2|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2 	ENST00000374525.1|AKAP2|ENSG00000241978.5|A kinase (PRKA) anchor protein 2
hg19_v2_chr3_+_44379944_44380019	1.57703	AAUACUG	ENST00000396078.3|TCAIM|ENSG00000179152.14|T cell activation inhibitor, mitochondrial 	ENST00000342649.4|TCAIM|ENSG00000179152.14|T cell activation inhibitor, mitochondrial
hg19_v2_chr2_+_102508955_102508955	1.57499	AAUACUG	ENST00000414004.2|FLJ20373|ENSG00000233404.2|FLJ20373
hg19_v2_chr11_+_119076745_119076792	1.54328	AAUACUG	ENST00000264033.4|CBL|ENSG00000110395.4|Cbl proto-oncogene, E3 ubiquitin protein ligase
hg19_v2_chr9_+_112542572_112542590	1.50619	AAUACUG	ENST00000374530.3|PALM2-AKAP2|ENSG00000157654.13|PALM2-AKAP2 readthrough
hg19_v2_chr9_+_132815985_132816018	1.49996	AAUACUG	ENST00000372410.3|GPR107|ENSG00000148358.15|G protein-coupled receptor 107
hg19_v2_chr3_-_52090461_52090566	1.46555	AAUACUG	ENST00000296483.6|DUSP7|ENSG00000164086.8|dual specificity phosphatase 7 	ENST00000495880.1|DUSP7|ENSG00000164086.8|dual specificity phosphatase 7
hg19_v2_chr12_-_109125285_109125372	1.42775	AAUACUG	ENST00000552871.1|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C 	ENST00000261401.3|CORO1C|ENSG00000110880.6|coronin, actin binding protein, 1C
hg19_v2_chr15_-_64673630_64673648	1.41874	AAUACUG	ENST00000558008.1|KIAA0101|ENSG00000166803.6|KIAA0101 	ENST00000559519.1|KIAA0101|ENSG00000166803.6|KIAA0101 	ENST00000380258.2|KIAA0101|ENSG00000166803.6|KIAA0101
hg19_v2_chr22_+_21271714_21271770	1.41462	AAUACUG	ENST00000354336.3|CRKL|ENSG00000099942.8|v-crk avian sarcoma virus CT10 oncogene homolog-like
hg19_v2_chr6_-_31869769_31869880	1.41224	AAUACUG	ENST00000375527.2|ZBTB12|ENSG00000204366.3|zinc finger and BTB domain containing 12
hg19_v2_chr3_+_150126101_150126122	1.35346	AAUACUG	ENST00000361875.3|TSC22D2|ENSG00000196428.8|TSC22 domain family, member 2 	ENST00000361136.2|TSC22D2|ENSG00000196428.8|TSC22 domain family, member 2
hg19_v2_chr6_+_43737939_43737956	1.317	AAUACUG	ENST00000372067.3|VEGFA|ENSG00000112715.16|vascular endothelial growth factor A
hg19_v2_chr5_+_38846101_38846174	1.31366	AAUACUG	ENST00000274276.3|OSMR|ENSG00000145623.8|oncostatin M receptor
hg19_v2_chr5_+_174905398_174905507	1.28818	AAUACUG	ENST00000321442.5|SFXN1|ENSG00000164466.8|sideroflexin 1
hg19_v2_chr3_+_50192537_50192563	1.27196	AAUACUG	ENST00000002829.3|SEMA3F|ENSG00000001617.7|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F
hg19_v2_chr2_+_28615669_28615733	1.26922	AAUACUG	ENST00000379619.1|FOSL2|ENSG00000075426.7|FOS-like antigen 2 	ENST00000264716.4|FOSL2|ENSG00000075426.7|FOS-like antigen 2
hg19_v2_chr3_-_27498235_27498278	1.26854	AAUACUG	ENST00000295736.5|SLC4A7|ENSG00000033867.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7 	ENST00000428386.1|SLC4A7|ENSG00000033867.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7 	ENST00000428179.1|SLC4A7|ENSG00000033867.12|solute carrier family 4, sodium bicarbonate cotransporter, member 7
hg19_v2_chr8_+_22224811_22224822	1.26035	AAUACUG	ENST00000381237.1|SLC39A14|ENSG00000104635.9|solute carrier family 39 (zinc transporter), member 14
hg19_v2_chr8_-_141645645_141645783	1.22763	AAUACUG	ENST00000519980.1|AGO2|ENSG00000123908.7|argonaute RISC catalytic component 2 	ENST00000220592.5|AGO2|ENSG00000123908.7|argonaute RISC catalytic component 2
hg19_v2_chr9_-_113800317_113800328	1.22266	AAUACUG	ENST00000374431.3|LPAR1|ENSG00000198121.9|lysophosphatidic acid receptor 1
hg19_v2_chr6_+_106546808_106546833	1.22152	AAUACUG	ENST00000369089.3|PRDM1|ENSG00000057657.10|PR domain containing 1, with ZNF domain
hg19_v2_chr11_-_128392085_128392232	1.21889	AAUACUG	ENST00000526145.2|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000531611.1|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000319397.6|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000345075.4|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1 	ENST00000535549.1|ETS1|ENSG00000134954.10|v-ets avian erythroblastosis virus E26 oncogene homolog 1
hg19_v2_chr2_-_122407097_122407163	1.21815	AAUACUG	ENST00000409078.3|CLASP1|ENSG00000074054.13|cytoplasmic linker associated protein 1
hg19_v2_chr5_+_149887672_149887698	1.20628	AAUACUG	ENST00000261797.6|NDST1|ENSG00000070614.10|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
hg19_v2_chr21_-_15755446_15755508	1.20213	AAUACUG	ENST00000544452.1|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13 	ENST00000285667.3|HSPA13|ENSG00000155304.4|heat shock protein 70kDa family, member 13
hg19_v2_chr1_-_117210290_117210376	1.19021	AAUACUG	ENST00000369483.1|IGSF3|ENSG00000143061.13|immunoglobulin superfamily, member 3 	ENST00000369486.3|IGSF3|ENSG00000143061.13|immunoglobulin superfamily, member 3
hg19_v2_chr1_+_25071848_25071944	1.18468	AAUACUG	ENST00000374379.4|CLIC4|ENSG00000169504.10|chloride intracellular channel 4
hg19_v2_chr1_+_110091189_110091268	1.1795	AAUACUG	ENST00000369851.4|GNAI3|ENSG00000065135.7|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3
hg19_v2_chr17_-_42908155_42908204	1.17633	AAUACUG	ENST00000426548.1|GJC1|ENSG00000182963.5|gap junction protein, gamma 1, 45kDa 	ENST00000590758.1|GJC1|ENSG00000182963.5|gap junction protein, gamma 1, 45kDa 	ENST00000591424.1|GJC1|ENSG00000182963.5|gap junction protein, gamma 1, 45kDa
hg19_v2_chr1_-_208417620_208417680	1.14901	AAUACUG	ENST00000367033.3|PLXNA2|ENSG00000076356.6|plexin A2
hg19_v2_chr1_-_231560790_231560790	1.14584	AAUACUG	ENST00000366641.3|EGLN1|ENSG00000135766.8|egl-9 family hypoxia-inducible factor 1
hg19_v2_chr7_+_73703728_73703807	1.07877	AAUACUG	ENST00000361545.5|CLIP2|ENSG00000106665.11|CAP-GLY domain containing linker protein 2 	ENST00000223398.6|CLIP2|ENSG00000106665.11|CAP-GLY domain containing linker protein 2
hg19_v2_chr6_-_10415470_10415508	1.05406	AAUACUG	ENST00000379604.2|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 	ENST00000379613.3|TFAP2A|ENSG00000137203.6|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
hg19_v2_chr7_-_94285511_94285522	1.05353	AAUACUG	ENST00000265735.7|SGCE|ENSG00000127990.11|sarcoglycan, epsilon
hg19_v2_chr19_-_11308190_11308244	1.03793	AAUACUG	ENST00000586659.1|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2 	ENST00000592903.1|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2 	ENST00000589359.1|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2 	ENST00000588724.1|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2 	ENST00000432929.2|KANK2|ENSG00000197256.6|KN motif and ankyrin repeat domains 2
hg19_v2_chr12_-_52585765_52585784	1.0314	AAUACUG	ENST00000313234.5|KRT80|ENSG00000167767.9|keratin 80 	ENST00000394815.2|KRT80|ENSG00000167767.9|keratin 80
hg19_v2_chr1_-_120190396_120190396	1.02816	AAUACUG	ENST00000421812.2|ZNF697|ENSG00000143067.4|zinc finger protein 697
hg19_v2_chr6_+_41040678_41040722	1.02326	AAUACUG	ENST00000341376.6|NFYA|ENSG00000001167.10|nuclear transcription factor Y, alpha 	ENST00000353205.5|NFYA|ENSG00000001167.10|nuclear transcription factor Y, alpha
hg19_v2_chr13_-_40177261_40177339	1.02053	AAUACUG	ENST00000379589.3|LHFP|ENSG00000183722.7|lipoma HMGIC fusion partner
hg19_v2_chr9_+_2621798_2621834	1.01594	AAUACUG	ENST00000382100.3|VLDLR|ENSG00000147852.11|very low density lipoprotein receptor
hg19_v2_chr9_-_139440314_139440314	1.00313	AAUACUG	ENST00000277541.6|NOTCH1|ENSG00000148400.9|notch 1
hg19_v2_chr2_+_208576355_208576475	0.992687	AAUACUG	ENST00000420822.1|CCNYL1|ENSG00000163249.5|cyclin Y-like 1 	ENST00000295414.3|CCNYL1|ENSG00000163249.5|cyclin Y-like 1 	ENST00000339882.5|CCNYL1|ENSG00000163249.5|cyclin Y-like 1
hg19_v2_chr1_+_230202936_230203001	0.974917	AAUACUG	ENST00000366672.4|GALNT2|ENSG00000143641.8|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)
hg19_v2_chr6_+_114178512_114178586	0.971064	AAUACUG	ENST00000368635.4|MARCKS|ENSG00000155130.5|myristoylated alanine-rich protein kinase C substrate
hg19_v2_chr3_-_185826855_185826911	0.968812	AAUACUG	ENST00000306376.5|ETV5|ENSG00000244405.3|ets variant 5
hg19_v2_chrX_-_131352152_131352204	0.967407	AAUACUG	ENST00000342983.2|RAP2C|ENSG00000123728.5|RAP2C, member of RAS oncogene family
hg19_v2_chr9_+_128509624_128509658	0.960249	AAUACUG	ENST00000342287.5|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3 	ENST00000373487.4|PBX3|ENSG00000167081.12|pre-B-cell leukemia homeobox 3
hg19_v2_chr9_-_136242909_136242953	0.957613	AAUACUG	ENST00000371991.3|SURF4|ENSG00000148248.9|surfeit 4 	ENST00000545297.1|SURF4|ENSG00000148248.9|surfeit 4
hg19_v2_chr15_+_63481668_63481812	0.937281	AAUACUG	ENST00000321437.4|RAB8B|ENSG00000166128.8|RAB8B, member RAS oncogene family 	ENST00000559006.1|RAB8B|ENSG00000166128.8|RAB8B, member RAS oncogene family 	ENST00000448330.2|RAB8B|ENSG00000166128.8|RAB8B, member RAS oncogene family
hg19_v2_chr19_-_40791302_40791443	0.931835	AAUACUG	ENST00000392038.2|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2 	ENST00000578123.1|AKT2|ENSG00000105221.12|v-akt murine thymoma viral oncogene homolog 2
hg19_v2_chr9_+_112403088_112403142	0.926284	AAUACUG	ENST00000448454.2|PALM2|ENSG00000243444.3|paralemmin 2
hg19_v2_chr22_-_50913371_50913486	0.920802	AAUACUG	ENST00000348911.6|SBF1|ENSG00000100241.16|SET binding factor 1 	ENST00000380817.3|SBF1|ENSG00000100241.16|SET binding factor 1 	ENST00000390679.3|SBF1|ENSG00000100241.16|SET binding factor 1
hg19_v2_chrX_-_54522558_54522612	0.904791	AAUACUG	ENST00000375135.3|FGD1|ENSG00000102302.7|FYVE, RhoGEF and PH domain containing 1
hg19_v2_chr7_-_98741642_98741713	0.903761	AAUACUG	ENST00000361368.2|SMURF1|ENSG00000198742.5|SMAD specific E3 ubiquitin protein ligase 1
hg19_v2_chr8_-_82024290_82024310	0.897934	AAUACUG	ENST00000220597.4|PAG1|ENSG00000076641.4|phosphoprotein associated with glycosphingolipid microdomains 1
hg19_v2_chr1_-_28969517_28969605	0.897286	AAUACUG	ENST00000263974.4|TAF12|ENSG00000120656.7|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa 	ENST00000373824.4|TAF12|ENSG00000120656.7|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa
hg19_v2_chr17_-_53499310_53499353	0.889733	AAUACUG	ENST00000262065.3|MMD|ENSG00000108960.3|monocyte to macrophage differentiation-associated
hg19_v2_chr11_+_94822968_94823042	0.885828	AAUACUG	ENST00000278505.4|ENDOD1|ENSG00000149218.4|endonuclease domain containing 1
hg19_v2_chr1_-_78444776_78444800	0.884149	AAUACUG	ENST00000370767.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1 	ENST00000421641.1|FUBP1|ENSG00000162613.12|far upstream element (FUSE) binding protein 1
hg19_v2_chr11_-_46940074_46940193	0.877593	AAUACUG	ENST00000378623.1|LRP4|ENSG00000134569.5|low density lipoprotein receptor-related protein 4 	ENST00000534404.1|LRP4|ENSG00000134569.5|low density lipoprotein receptor-related protein 4
hg19_v2_chr10_+_120967072_120967101	0.877132	AAUACUG	ENST00000392870.2|GRK5|ENSG00000198873.10|G protein-coupled receptor kinase 5
hg19_v2_chr4_-_73434498_73434516	0.872937	AAUACUG	ENST00000286657.4|ADAMTS3|ENSG00000156140.4|ADAM metallopeptidase with thrombospondin type 1 motif, 3
hg19_v2_chr2_+_228336849_228336904	0.87171	AAUACUG	ENST00000409979.2|AGFG1|ENSG00000173744.13|ArfGAP with FG repeats 1 	ENST00000310078.8|AGFG1|ENSG00000173744.13|ArfGAP with FG repeats 1
hg19_v2_chr15_+_52121822_52121833	0.868334	AAUACUG	ENST00000558455.1|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous) 	ENST00000308580.7|TMOD3|ENSG00000138594.8|tropomodulin 3 (ubiquitous)
hg19_v2_chr22_-_36236265_36236481	0.863277	AAUACUG	ENST00000414461.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000416721.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000449924.2|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000262829.7|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2 	ENST00000397305.3|RBFOX2|ENSG00000100320.18|RNA binding protein, fox-1 homolog (C. elegans) 2
hg19_v2_chr3_-_69435224_69435280	0.861238	AAUACUG	ENST00000398540.3|FRMD4B|ENSG00000114541.10|FERM domain containing 4B
hg19_v2_chr9_-_110251836_110251927	0.855312	AAUACUG	ENST00000374672.4|KLF4|ENSG00000136826.10|Kruppel-like factor 4 (gut)
hg19_v2_chr1_+_77333117_77333139	0.842819	AAUACUG	ENST00000477717.1|ST6GALNAC5|ENSG00000117069.10|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
hg19_v2_chr2_-_216300784_216300895	0.842356	AAUACUG	ENST00000421182.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000432072.2|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000323926.6|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000336916.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000357867.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000359671.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000346544.3|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000345488.5|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000357009.2|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000446046.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000356005.4|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000443816.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000426059.1|FN1|ENSG00000115414.14|fibronectin 1 	ENST00000354785.4|FN1|ENSG00000115414.14|fibronectin 1
hg19_v2_chr9_+_131644388_131644393	0.836228	AAUACUG	ENST00000372600.4|LRRC8A|ENSG00000136802.7|leucine rich repeat containing 8 family, member A
hg19_v2_chr14_+_52118576_52118673	0.832491	AAUACUG	ENST00000395718.2|FRMD6|ENSG00000139926.11|FERM domain containing 6 	ENST00000344768.5|FRMD6|ENSG00000139926.11|FERM domain containing 6
hg19_v2_chr1_-_225615599_225615802	0.83141	AAUACUG	ENST00000421383.1|LBR|ENSG00000143815.10|lamin B receptor 	ENST00000272163.4|LBR|ENSG00000143815.10|lamin B receptor
hg19_v2_chr10_-_105615164_105615323	0.830998	AAUACUG	ENST00000355946.2|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A 	ENST00000369774.4|SH3PXD2A|ENSG00000107957.12|SH3 and PX domains 2A
hg19_v2_chr12_+_120105558_120105694	0.82743	AAUACUG	ENST00000229328.5|PRKAB1|ENSG00000111725.6|protein kinase, AMP-activated, beta 1 non-catalytic subunit 	ENST00000541640.1|PRKAB1|ENSG00000111725.6|protein kinase, AMP-activated, beta 1 non-catalytic subunit
hg19_v2_chr12_-_106641728_106641805	0.81902	AAUACUG	ENST00000378026.4|CKAP4|ENSG00000136026.9|cytoskeleton-associated protein 4
hg19_v2_chr8_+_95653373_95653415	0.811226	AAUACUG	ENST00000358397.5|ESRP1|ENSG00000104413.11|epithelial splicing regulatory protein 1
hg19_v2_chr17_-_71640227_71640228	0.799615	AAUACUG	ENST00000388726.3|SDK2|ENSG00000069188.12|sidekick cell adhesion molecule 2 	ENST00000392650.3|SDK2|ENSG00000069188.12|sidekick cell adhesion molecule 2
hg19_v2_chr6_-_108395907_108395971	0.795618	AAUACUG	ENST00000193322.3|OSTM1|ENSG00000081087.10|osteopetrosis associated transmembrane protein 1
hg19_v2_chr9_-_34589700_34589709	0.794296	AAUACUG	ENST00000351266.4|CNTFR|ENSG00000122756.10|ciliary neurotrophic factor receptor
hg19_v2_chr8_-_49833978_49833996	0.785139	AAUACUG	ENST00000020945.1|SNAI2|ENSG00000019549.4|snail family zinc finger 2
hg19_v2_chr9_+_80912059_80912081	0.782862	AAUACUG	ENST00000347159.2|PSAT1|ENSG00000135069.9|phosphoserine aminotransferase 1 	ENST00000376588.3|PSAT1|ENSG00000135069.9|phosphoserine aminotransferase 1
hg19_v2_chr19_+_34287751_34287807	0.782474	AAUACUG	ENST00000590771.1|KCTD15|ENSG00000153885.10|potassium channel tetramerization domain containing 15 	ENST00000589786.1|KCTD15|ENSG00000153885.10|potassium channel tetramerization domain containing 15 	ENST00000284006.6|KCTD15|ENSG00000153885.10|potassium channel tetramerization domain containing 15 	ENST00000588881.1|KCTD15|ENSG00000153885.10|potassium channel tetramerization domain containing 15
hg19_v2_chr17_-_62658186_62658231	0.781642	AAUACUG	ENST00000262435.9|SMURF2|ENSG00000108854.11|SMAD specific E3 ubiquitin protein ligase 2
hg19_v2_chr11_+_118477144_118477156	0.776556	AAUACUG	ENST00000361417.2|PHLDB1|ENSG00000019144.12|pleckstrin homology-like domain, family B, member 1
hg19_v2_chr3_+_178866199_178866311	0.772753	AAUACUG	ENST00000263967.3|PIK3CA|ENSG00000121879.3|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
hg19_v2_chr16_+_8768422_8768453	0.769557	AAUACUG	ENST00000268251.8|ABAT|ENSG00000183044.7|4-aminobutyrate aminotransferase 	ENST00000564714.1|ABAT|ENSG00000183044.7|4-aminobutyrate aminotransferase
hg19_v2_chr2_+_201170703_201170716	0.763287	AAUACUG	ENST00000358677.5|SPATS2L|ENSG00000196141.8|spermatogenesis associated, serine-rich 2-like
hg19_v2_chr4_+_113066552_113066563	0.761752	AAUACUG	ENST00000309733.5|C4orf32|ENSG00000174749.5|chromosome 4 open reading frame 32
hg19_v2_chr2_-_166930131_166930149	0.738835	AAUACUG	ENST00000303395.4|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000409050.1|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000423058.2|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit 	ENST00000375405.3|SCN1A|ENSG00000144285.11|sodium channel, voltage-gated, type I, alpha subunit
hg19_v2_chr21_+_40177143_40177231	0.730513	AAUACUG	ENST00000360214.3|ETS2|ENSG00000157557.7|v-ets avian erythroblastosis virus E26 oncogene homolog 2
hg19_v2_chr15_-_23932437_23932459	0.725357	AAUACUG	ENST00000331837.4|NDN|ENSG00000182636.4|necdin, melanoma antigen (MAGE) family member
hg19_v2_chr9_+_5629025_5629119	0.721342	AAUACUG	ENST00000251879.6|KIAA1432|ENSG00000107036.7|KIAA1432 	ENST00000414202.2|KIAA1432|ENSG00000107036.7|KIAA1432
hg19_v2_chr1_-_175161890_175161929	0.715193	AAUACUG	ENST00000545251.2|KIAA0040|ENSG00000235750.5|KIAA0040 	ENST00000423313.1|KIAA0040|ENSG00000235750.5|KIAA0040
hg19_v2_chr15_-_49447835_49447858	0.703469	AAUACUG	ENST00000388901.5|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2 	ENST00000299259.6|COPS2|ENSG00000166200.10|COP9 signalosome subunit 2
hg19_v2_chr3_-_138553594_138553684	0.701602	AAUACUG	ENST00000477593.1|PIK3CB|ENSG00000051382.4|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta 	ENST00000483968.1|PIK3CB|ENSG00000051382.4|phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
hg19_v2_chr1_-_8086343_8086378	0.698721	AAUACUG	ENST00000474874.1|ERRFI1|ENSG00000116285.8|ERBB receptor feedback inhibitor 1 	ENST00000469499.1|ERRFI1|ENSG00000116285.8|ERBB receptor feedback inhibitor 1 	ENST00000377482.5|ERRFI1|ENSG00000116285.8|ERBB receptor feedback inhibitor 1
hg19_v2_chr12_-_8025442_8025459	0.69864	AAUACUG	ENST00000340749.5|SLC2A14|ENSG00000173262.7|solute carrier family 2 (facilitated glucose transporter), member 14 	ENST00000535295.1|SLC2A14|ENSG00000173262.7|solute carrier family 2 (facilitated glucose transporter), member 14 	ENST00000539234.1|SLC2A14|ENSG00000173262.7|solute carrier family 2 (facilitated glucose transporter), member 14
hg19_v2_chr4_-_122744998_122745093	0.6972	AAUACUG	ENST00000274026.5|CCNA2|ENSG00000145386.5|cyclin A2
hg19_v2_chr5_-_147162078_147162106	0.695181	AAUACUG	ENST00000507386.1|JAKMIP2|ENSG00000176049.11|janus kinase and microtubule interacting protein 2
hg19_v2_chr15_+_59063478_59063561	0.692613	AAUACUG	ENST00000559228.1|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B 	ENST00000450403.2|FAM63B|ENSG00000128923.6|family with sequence similarity 63, member B
hg19_v2_chr17_-_49198216_49198236	0.68912	AAUACUG	ENST00000262013.7|SPAG9|ENSG00000008294.16|sperm associated antigen 9 	ENST00000357122.4|SPAG9|ENSG00000008294.16|sperm associated antigen 9
hg19_v2_chr17_-_79885576_79885624	0.686929	AAUACUG	ENST00000574686.1|MAFG|ENSG00000197063.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G 	ENST00000357736.4|MAFG|ENSG00000197063.6|v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G
hg19_v2_chr6_+_160390102_160390147	0.686083	AAUACUG	ENST00000356956.1|IGF2R|ENSG00000197081.8|insulin-like growth factor 2 receptor
hg19_v2_chr12_+_57522258_57522313	0.68043	AAUACUG	ENST00000553277.1|LRP1|ENSG00000123384.9|low density lipoprotein receptor-related protein 1 	ENST00000243077.3|LRP1|ENSG00000123384.9|low density lipoprotein receptor-related protein 1
hg19_v2_chr5_-_172198190_172198206	0.676418	AAUACUG	ENST00000239223.3|DUSP1|ENSG00000120129.5|dual specificity phosphatase 1
hg19_v2_chr13_-_103451307_103451380	0.666815	AAUACUG	ENST00000376004.4|KDELC1|ENSG00000134901.8|KDEL (Lys-Asp-Glu-Leu) containing 1
hg19_v2_chr12_-_8088871_8088932	0.666096	AAUACUG	ENST00000075120.7|SLC2A3|ENSG00000059804.11|solute carrier family 2 (facilitated glucose transporter), member 3
hg19_v2_chr14_+_67826709_67826751	0.665512	AAUACUG	ENST00000256383.4|EIF2S1|ENSG00000134001.8|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa
hg19_v2_chr12_+_97300995_97301054	0.661076	AAUACUG	ENST00000266742.4|NEDD1|ENSG00000139350.7|neural precursor cell expressed, developmentally down-regulated 1 	ENST00000429527.2|NEDD1|ENSG00000139350.7|neural precursor cell expressed, developmentally down-regulated 1 	ENST00000554226.1|NEDD1|ENSG00000139350.7|neural precursor cell expressed, developmentally down-regulated 1 	ENST00000557478.1|NEDD1|ENSG00000139350.7|neural precursor cell expressed, developmentally down-regulated 1 	ENST00000557092.1|NEDD1|ENSG00000139350.7|neural precursor cell expressed, developmentally down-regulated 1 	ENST00000411739.2|NEDD1|ENSG00000139350.7|neural precursor cell expressed, developmentally down-regulated 1 	ENST00000553609.1|NEDD1|ENSG00000139350.7|neural precursor cell expressed, developmentally down-regulated 1
hg19_v2_chr12_-_28124903_28124957	0.660868	AAUACUG	ENST00000395872.1|PTHLH|ENSG00000087494.11|parathyroid hormone-like hormone 	ENST00000354417.3|PTHLH|ENSG00000087494.11|parathyroid hormone-like hormone 	ENST00000201015.4|PTHLH|ENSG00000087494.11|parathyroid hormone-like hormone
hg19_v2_chr5_+_14143728_14143829	0.660423	AAUACUG	ENST00000344204.4|TRIO|ENSG00000038382.13|trio Rho guanine nucleotide exchange factor 	ENST00000537187.1|TRIO|ENSG00000038382.13|trio Rho guanine nucleotide exchange factor
hg19_v2_chr11_-_47788847_47788919	0.659258	AAUACUG	ENST00000263773.5|FNBP4|ENSG00000109920.8|formin binding protein 4
hg19_v2_chr3_-_176914238_176914277	0.654603	AAUACUG	ENST00000430069.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1 	ENST00000428970.1|TBL1XR1|ENSG00000177565.11|transducin (beta)-like 1 X-linked receptor 1
hg19_v2_chr3_+_141205852_141205929	0.650007	AAUACUG	ENST00000286364.3|RASA2|ENSG00000155903.7|RAS p21 protein activator 2 	ENST00000452898.1|RASA2|ENSG00000155903.7|RAS p21 protein activator 2
hg19_v2_chr13_+_112721913_112721913	0.647345	AAUACUG	ENST00000330949.1|SOX1|ENSG00000182968.3|SRY (sex determining region Y)-box 1
hg19_v2_chr1_+_213123915_213123955	0.638227	AAUACUG	ENST00000366968.4|VASH2|ENSG00000143494.11|vasohibin 2 	ENST00000490792.1|VASH2|ENSG00000143494.11|vasohibin 2
hg19_v2_chr18_+_19321281_19321334	0.635634	AAUACUG	ENST00000261537.6|MIB1|ENSG00000101752.7|mindbomb E3 ubiquitin protein ligase 1
hg19_v2_chr12_-_118797475_118797527	0.634416	AAUACUG	ENST00000541786.1|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000419821.2|TAOK3|ENSG00000135090.9|TAO kinase 3 	ENST00000541878.1|TAOK3|ENSG00000135090.9|TAO kinase 3
hg19_v2_chr7_+_4721885_4721945	0.629491	AAUACUG	ENST00000328914.4|FOXK1|ENSG00000164916.9|forkhead box K1
hg19_v2_chr14_-_99737565_99737617	0.61604	AAUACUG	ENST00000357195.3|BCL11B|ENSG00000127152.13|B-cell CLL/lymphoma 11B (zinc finger protein)
hg19_v2_chrX_+_41192595_41192651	0.609799	AAUACUG	ENST00000399959.2|DDX3X|ENSG00000215301.5|DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked
hg19_v2_chr3_+_158991025_158991083	0.607146	AAUACUG	ENST00000337808.6|IQCJ-SCHIP1|ENSG00000250588.2|IQCJ-SCHIP1 readthrough
hg19_v2_chr8_+_104831472_104831510	0.606377	AAUACUG	ENST00000262231.10|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2 	ENST00000507740.1|RIMS2|ENSG00000176406.16|regulating synaptic membrane exocytosis 2
hg19_v2_chr13_-_21635631_21635744	0.606345	AAUACUG	ENST00000382592.4|LATS2|ENSG00000150457.7|large tumor suppressor kinase 2
hg19_v2_chr4_+_91048706_91048741	0.605189	AAUACUG	ENST00000509176.1|CCSER1|ENSG00000184305.10|coiled-coil serine-rich protein 1
hg19_v2_chr12_+_56325812_56325892	0.599602	AAUACUG	ENST00000394147.1|DGKA|ENSG00000065357.15|diacylglycerol kinase, alpha 80kDa 	ENST00000551156.1|DGKA|ENSG00000065357.15|diacylglycerol kinase, alpha 80kDa 	ENST00000553783.1|DGKA|ENSG00000065357.15|diacylglycerol kinase, alpha 80kDa 	ENST00000557080.1|DGKA|ENSG00000065357.15|diacylglycerol kinase, alpha 80kDa 	ENST00000432422.3|DGKA|ENSG00000065357.15|diacylglycerol kinase, alpha 80kDa 	ENST00000556001.1|DGKA|ENSG00000065357.15|diacylglycerol kinase, alpha 80kDa
hg19_v2_chr17_-_63052929_63052962	0.599359	AAUACUG	ENST00000439174.2|GNA13|ENSG00000120063.5|guanine nucleotide binding protein (G protein), alpha 13
hg19_v2_chr21_+_39628655_39628672	0.593136	AAUACUG	ENST00000398925.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15 	ENST00000398928.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15 	ENST00000328656.4|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15 	ENST00000443341.1|KCNJ15|ENSG00000157551.13|potassium inwardly-rectifying channel, subfamily J, member 15
hg19_v2_chr10_+_96162242_96162283	0.59175	AAUACUG	ENST00000225235.4|TBC1D12|ENSG00000108239.8|TBC1 domain family, member 12
hg19_v2_chr1_-_41131326_41131400	0.589234	AAUACUG	ENST00000372684.3|RIMS3|ENSG00000117016.5|regulating synaptic membrane exocytosis 3
hg19_v2_chr1_+_28285973_28285973	0.588494	AAUACUG	ENST00000373884.5|XKR8|ENSG00000158156.7|XK, Kell blood group complex subunit-related family, member 8
hg19_v2_chr14_-_34931458_34931562	0.586785	AAUACUG	ENST00000298130.4|SPTSSA|ENSG00000165389.6|serine palmitoyltransferase, small subunit A
hg19_v2_chr11_-_64901978_64902009	0.586715	AAUACUG	ENST00000294256.8|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin 	ENST00000377190.3|SYVN1|ENSG00000162298.12|synovial apoptosis inhibitor 1, synoviolin
hg19_v2_chr19_-_18632861_18632937	0.584857	AAUACUG	ENST00000262809.4|ELL|ENSG00000105656.8|elongation factor RNA polymerase II
hg19_v2_chr16_-_67281413_67281561	0.58044	AAUACUG	ENST00000258201.4|FHOD1|ENSG00000135723.9|formin homology 2 domain containing 1
hg19_v2_chr7_-_27183263_27183287	0.57481	AAUACUG	ENST00000222726.3|HOXA5|ENSG00000106004.4|homeobox A5
hg19_v2_chr4_-_68566832_68566897	0.570793	AAUACUG	ENST00000420827.2|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6 	ENST00000322244.5|UBA6|ENSG00000033178.8|ubiquitin-like modifier activating enzyme 6
hg19_v2_chr7_+_77166592_77166653	0.569649	AAUACUG	ENST00000248594.6|PTPN12|ENSG00000127947.11|protein tyrosine phosphatase, non-receptor type 12
hg19_v2_chr3_-_120170052_120170100	0.566802	AAUACUG	ENST00000295633.3|FSTL1|ENSG00000163430.5|follistatin-like 1
hg19_v2_chr8_+_8860314_8860388	0.566524	AAUACUG	ENST00000250263.7|ERI1|ENSG00000104626.10|exoribonuclease 1 	ENST00000519292.1|ERI1|ENSG00000104626.10|exoribonuclease 1
hg19_v2_chr5_+_70751442_70751456	0.562973	AAUACUG	ENST00000358731.4|BDP1|ENSG00000145734.14|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 	ENST00000380675.2|BDP1|ENSG00000145734.14|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB
hg19_v2_chrX_+_150151752_150151762	0.562554	AAUACUG	ENST00000325307.7|HMGB3|ENSG00000029993.10|high mobility group box 3
hg19_v2_chr10_-_3827417_3827473	0.559571	AAUACUG	ENST00000497571.1|KLF6|ENSG00000067082.10|Kruppel-like factor 6 	ENST00000542957.1|KLF6|ENSG00000067082.10|Kruppel-like factor 6
hg19_v2_chr7_-_19748640_19748710	0.556751	AAUACUG	ENST00000222567.5|TWISTNB|ENSG00000105849.5|TWIST neighbor
hg19_v2_chr19_+_797392_797432	0.54798	AAUACUG	ENST00000350092.4|PTBP1|ENSG00000011304.12|polypyrimidine tract binding protein 1 	ENST00000349038.4|PTBP1|ENSG00000011304.12|polypyrimidine tract binding protein 1 	ENST00000586481.1|PTBP1|ENSG00000011304.12|polypyrimidine tract binding protein 1 	ENST00000585535.1|PTBP1|ENSG00000011304.12|polypyrimidine tract binding protein 1
hg19_v2_chr8_-_22550815_22550844	0.542829	AAUACUG	ENST00000317216.2|EGR3|ENSG00000179388.8|early growth response 3
hg19_v2_chr20_-_48729670_48729694	0.535553	AAUACUG	ENST00000371657.5|UBE2V1|ENSG00000244687.7|ubiquitin-conjugating enzyme E2 variant 1
hg19_v2_chr8_+_90769967_90769997	0.535379	AAUACUG	ENST00000220751.4|RIPK2|ENSG00000104312.6|receptor-interacting serine-threonine kinase 2
hg19_v2_chr3_+_159557637_159557650	0.534927	AAUACUG	ENST00000445224.2|SCHIP1|ENSG00000151967.14|schwannomin interacting protein 1
hg19_v2_chr9_+_35538616_35538650	0.530606	AAUACUG	ENST00000455600.1|RUSC2|ENSG00000198853.7|RUN and SH3 domain containing 2
hg19_v2_chr12_+_5541267_5541285	0.524925	AAUACUG	ENST00000423158.3|NTF3|ENSG00000185652.7|neurotrophin 3
hg19_v2_chr15_+_57884117_57884160	0.518458	AAUACUG	ENST00000267853.5|MYZAP|ENSG00000263155.1|myocardial zonula adherens protein
hg19_v2_chr20_+_62795827_62795878	0.517712	AAUACUG	ENST00000328439.1|MYT1|ENSG00000196132.7|myelin transcription factor 1 	ENST00000536311.1|MYT1|ENSG00000196132.7|myelin transcription factor 1
hg19_v2_chr17_-_72919317_72919368	0.512714	AAUACUG	ENST00000319642.1|USH1G|ENSG00000182040.4|Usher syndrome 1G (autosomal recessive)
hg19_v2_chr9_+_470288_470336	0.509571	AAUACUG	ENST00000382303.1|KANK1|ENSG00000107104.14|KN motif and ankyrin repeat domains 1
hg19_v2_chr14_+_55518349_55518423	0.506969	AAUACUG	ENST00000395468.4|MAPK1IP1L|ENSG00000168175.10|mitogen-activated protein kinase 1 interacting protein 1-like
hg19_v2_chr3_+_171758344_171758358	0.505802	AAUACUG	ENST00000336824.4|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B 	ENST00000423424.1|FNDC3B|ENSG00000075420.8|fibronectin type III domain containing 3B
hg19_v2_chr11_+_128563652_128563689	0.505426	AAUACUG	ENST00000527786.2|FLI1|ENSG00000151702.12|Fli-1 proto-oncogene, ETS transcription factor
hg19_v2_chr6_+_30687978_30688141	0.503273	AAUACUG	ENST00000327892.8|TUBB|ENSG00000196230.8|tubulin, beta class I 	ENST00000435534.1|TUBB|ENSG00000196230.8|tubulin, beta class I
hg19_v2_chr9_+_33817461_33817565	0.497301	AAUACUG	ENST00000263228.3|UBE2R2|ENSG00000107341.4|ubiquitin-conjugating enzyme E2R 2
hg19_v2_chr6_+_4890226_4890276	0.496045	AAUACUG	ENST00000343762.5|CDYL|ENSG00000153046.13|chromodomain protein, Y-like
hg19_v2_chr4_+_156588350_156588406	0.492658	AAUACUG	ENST00000296518.7|GUCY1A3|ENSG00000164116.12|guanylate cyclase 1, soluble, alpha 3
hg19_v2_chr10_-_23003460_23003562	0.491602	AAUACUG	ENST00000376573.4|PIP4K2A|ENSG00000150867.9|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
hg19_v2_chr1_+_40627038_40627071	0.491033	AAUACUG	ENST00000372771.4|RLF|ENSG00000117000.8|rearranged L-myc fusion
hg19_v2_chr22_-_22307199_22307242	0.485593	AAUACUG	ENST00000397495.4|PPM1F|ENSG00000100034.9|protein phosphatase, Mg2+/Mn2+ dependent, 1F 	ENST00000263212.5|PPM1F|ENSG00000100034.9|protein phosphatase, Mg2+/Mn2+ dependent, 1F
hg19_v2_chr1_-_214724566_214724566	0.484793	AAUACUG	ENST00000366956.5|PTPN14|ENSG00000152104.7|protein tyrosine phosphatase, non-receptor type 14
hg19_v2_chr7_-_111846435_111846471	0.484466	AAUACUG	ENST00000437633.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4 	ENST00000428084.1|DOCK4|ENSG00000128512.15|dedicator of cytokinesis 4
hg19_v2_chr14_-_53417732_53417815	0.481081	AAUACUG	ENST00000399304.3|FERMT2|ENSG00000073712.9|fermitin family member 2 	ENST00000395631.2|FERMT2|ENSG00000073712.9|fermitin family member 2 	ENST00000341590.3|FERMT2|ENSG00000073712.9|fermitin family member 2 	ENST00000343279.4|FERMT2|ENSG00000073712.9|fermitin family member 2
hg19_v2_chr10_+_52751010_52751118	0.477828	AAUACUG	ENST00000373985.1|PRKG1|ENSG00000185532.10|protein kinase, cGMP-dependent, type I
hg19_v2_chr3_-_33686743_33686807	0.477482	AAUACUG	ENST00000333778.6|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2 	ENST00000539981.1|CLASP2|ENSG00000163539.11|cytoplasmic linker associated protein 2
hg19_v2_chr17_-_48227877_48227877	0.472847	AAUACUG	ENST00000316878.6|PPP1R9B|ENSG00000108819.9|protein phosphatase 1, regulatory subunit 9B
hg19_v2_chr1_+_199996702_199996732	0.462131	AAUACUG	ENST00000367362.3|NR5A2|ENSG00000116833.9|nuclear receptor subfamily 5, group A, member 2
hg19_v2_chr7_-_6312206_6312308	0.46213	AAUACUG	ENST00000350796.3|CYTH3|ENSG00000008256.11|cytohesin 3
hg19_v2_chr10_+_89622870_89622870	0.461432	AAUACUG	ENST00000371953.3|PTEN|ENSG00000171862.5|phosphatase and tensin homolog
hg19_v2_chr13_-_107187462_107187462	0.455217	AAUACUG	ENST00000245323.4|EFNB2|ENSG00000125266.6|ephrin-B2
hg19_v2_chr10_+_60094735_60094749	0.45302	AAUACUG	ENST00000373910.4|UBE2D1|ENSG00000072401.10|ubiquitin-conjugating enzyme E2D 1
hg19_v2_chr8_-_122653630_122653661	0.45009	AAUACUG	ENST00000303924.4|HAS2|ENSG00000170961.6|hyaluronan synthase 2
hg19_v2_chr14_-_75593708_75593783	0.447053	AAUACUG	ENST00000557673.1|NEK9|ENSG00000119638.8|NIMA-related kinase 9 	ENST00000238616.5|NEK9|ENSG00000119638.8|NIMA-related kinase 9
hg19_v2_chr10_-_99052382_99052413	0.44653	AAUACUG	ENST00000453547.2|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000466484.1|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19 	ENST00000316676.8|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358308.3|ARHGAP19-SLIT1|ENSG00000269891.1|ARHGAP19-SLIT1 readthrough (NMD candidate) 	ENST00000358531.4|ARHGAP19|ENSG00000213390.6|Rho GTPase activating protein 19
hg19_v2_chr2_+_114647504_114647557	0.433389	AAUACUG	ENST00000263238.2|ACTR3|ENSG00000115091.7|ARP3 actin-related protein 3 homolog (yeast)
hg19_v2_chr20_-_48770174_48770243	0.4306	AAUACUG	ENST00000341698.2|TMEM189-UBE2V1|ENSG00000124208.16|TMEM189-UBE2V1 readthrough
hg19_v2_chr9_-_23821273_23821313	0.427395	AAUACUG	ENST00000380110.4|ELAVL2|ENSG00000107105.10|ELAV like neuron-specific RNA binding protein 2
hg19_v2_chr18_-_30353025_30353126	0.426241	AAUACUG	ENST00000359358.4|KLHL14|ENSG00000197705.5|kelch-like family member 14
hg19_v2_chr7_+_138916231_138916231	0.425269	AAUACUG	ENST00000473989.3|UBN2|ENSG00000157741.10|ubinuclein 2 	ENST00000288561.8|UBN2|ENSG00000157741.10|ubinuclein 2
hg19_v2_chr20_+_46130601_46130613	0.424201	AAUACUG	ENST00000341724.6|NCOA3|ENSG00000124151.14|nuclear receptor coactivator 3
hg19_v2_chr2_+_231577532_231577639	0.423778	AAUACUG	ENST00000258418.5|CAB39|ENSG00000135932.6|calcium binding protein 39
hg19_v2_chr5_-_171433819_171433911	0.423461	AAUACUG	ENST00000296933.6|FBXW11|ENSG00000072803.13|F-box and WD repeat domain containing 11
hg19_v2_chr5_+_31193847_31193887	0.419399	AAUACUG	ENST00000514738.1|CDH6|ENSG00000113361.8|cadherin 6, type 2, K-cadherin (fetal kidney) 	ENST00000265071.2|CDH6|ENSG00000113361.8|cadherin 6, type 2, K-cadherin (fetal kidney)
hg19_v2_chr7_+_77469439_77469497	0.418894	AAUACUG	ENST00000450574.1|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000416283.2|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2 	ENST00000248550.7|PHTF2|ENSG00000006576.12|putative homeodomain transcription factor 2
hg19_v2_chr7_-_42276612_42276782	0.417028	AAUACUG	ENST00000395925.3|GLI3|ENSG00000106571.8|GLI family zinc finger 3 	ENST00000437480.1|GLI3|ENSG00000106571.8|GLI family zinc finger 3
hg19_v2_chr11_+_12695944_12695989	0.414688	AAUACUG	ENST00000361905.4|TEAD1|ENSG00000187079.10|TEA domain family member 1 (SV40 transcriptional enhancer factor)
hg19_v2_chr2_+_48541776_48541874	0.413848	AAUACUG	ENST00000413569.1|FOXN2|ENSG00000170802.11|forkhead box N2 	ENST00000340553.3|FOXN2|ENSG00000170802.11|forkhead box N2
hg19_v2_chr2_+_99061298_99061413	0.413832	AAUACUG	ENST00000409016.4|INPP4A|ENSG00000040933.11|inositol polyphosphate-4-phosphatase, type I, 107kDa 	ENST00000409851.3|INPP4A|ENSG00000040933.11|inositol polyphosphate-4-phosphatase, type I, 107kDa 	ENST00000409463.1|INPP4A|ENSG00000040933.11|inositol polyphosphate-4-phosphatase, type I, 107kDa 	ENST00000074304.5|INPP4A|ENSG00000040933.11|inositol polyphosphate-4-phosphatase, type I, 107kDa 	ENST00000545415.1|INPP4A|ENSG00000040933.11|inositol polyphosphate-4-phosphatase, type I, 107kDa 	ENST00000409540.3|INPP4A|ENSG00000040933.11|inositol polyphosphate-4-phosphatase, type I, 107kDa
hg19_v2_chr20_-_48770244_48770335	0.41141	AAUACUG	ENST00000371650.5|TMEM189|ENSG00000240849.6|transmembrane protein 189 	ENST00000371652.4|TMEM189|ENSG00000240849.6|transmembrane protein 189 	ENST00000557021.1|TMEM189|ENSG00000240849.6|transmembrane protein 189
hg19_v2_chr4_+_144257915_144258009	0.409921	AAUACUG	ENST00000262995.4|GAB1|ENSG00000109458.4|GRB2-associated binding protein 1
hg19_v2_chr4_-_176923483_176923514	0.405521	AAUACUG	ENST00000280187.7|GPM6A|ENSG00000150625.12|glycoprotein M6A 	ENST00000512509.1|GPM6A|ENSG00000150625.12|glycoprotein M6A
hg19_v2_chr14_+_53196872_53196959	0.405383	AAUACUG	ENST00000442123.2|STYX|ENSG00000198252.7|serine/threonine/tyrosine interacting protein 	ENST00000354586.4|STYX|ENSG00000198252.7|serine/threonine/tyrosine interacting protein
hg19_v2_chr17_+_57970469_57970600	0.401856	AAUACUG	ENST00000443572.2|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000406116.3|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000225577.4|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1 	ENST00000393021.3|RPS6KB1|ENSG00000108443.9|ribosomal protein S6 kinase, 70kDa, polypeptide 1
hg19_v2_chr10_-_81205373_81205429	0.401743	AAUACUG	ENST00000372336.3|ZCCHC24|ENSG00000165424.6|zinc finger, CCHC domain containing 24
hg19_v2_chrX_-_15872914_15873054	0.398368	AAUACUG	ENST00000380291.1|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000545766.1|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000421527.2|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit 	ENST00000329235.2|AP1S2|ENSG00000182287.9|adaptor-related protein complex 1, sigma 2 subunit
hg19_v2_chr3_-_123603137_123603203	0.397408	AAUACUG	ENST00000360304.3|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000359169.1|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000346322.5|MYLK|ENSG00000065534.14|myosin light chain kinase 	ENST00000360772.3|MYLK|ENSG00000065534.14|myosin light chain kinase
hg19_v2_chr8_+_70378852_70378866	0.395459	AAUACUG	ENST00000525061.1|SULF1|ENSG00000137573.9|sulfatase 1 	ENST00000458141.2|SULF1|ENSG00000137573.9|sulfatase 1 	ENST00000260128.4|SULF1|ENSG00000137573.9|sulfatase 1
hg19_v2_chr10_-_120514720_120514758	0.394823	AAUACUG	ENST00000369151.3|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1 	ENST00000340214.4|CACUL1|ENSG00000151893.10|CDK2-associated, cullin domain 1
hg19_v2_chr2_+_45168875_45168916	0.3947	AAUACUG	ENST00000260653.3|SIX3|ENSG00000138083.3|SIX homeobox 3
hg19_v2_chr12_+_56360550_56360566	0.393622	AAUACUG	ENST00000266970.4|CDK2|ENSG00000123374.6|cyclin-dependent kinase 2
hg19_v2_chr3_-_156272872_156272923	0.393385	AAUACUG	ENST00000476217.1|SSR3|ENSG00000114850.2|signal sequence receptor, gamma (translocon-associated protein gamma)
hg19_v2_chr6_-_24721054_24721074	0.388412	AAUACUG	ENST00000378119.4|C6orf62|ENSG00000112308.8|chromosome 6 open reading frame 62
hg19_v2_chr16_-_70472946_70473024	0.387692	AAUACUG	ENST00000342907.2|ST3GAL2|ENSG00000157350.8|ST3 beta-galactoside alpha-2,3-sialyltransferase 2
hg19_v2_chr17_-_36956155_36956223	0.385174	AAUACUG	ENST00000269554.3|PIP4K2B|ENSG00000141720.7|phosphatidylinositol-5-phosphate 4-kinase, type II, beta
hg19_v2_chr17_-_45266542_45266683	0.384326	AAUACUG	ENST00000531206.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000527547.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000446365.2|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000575483.1|CDC27|ENSG00000004897.7|cell division cycle 27 	ENST00000066544.3|CDC27|ENSG00000004897.7|cell division cycle 27
hg19_v2_chr4_+_87856129_87856186	0.382553	AAUACUG	ENST00000395146.4|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1 	ENST00000507468.1|AFF1|ENSG00000172493.16|AF4/FMR2 family, member 1
hg19_v2_chr11_+_120195992_120196023	0.381339	AAUACUG	ENST00000314475.2|TMEM136|ENSG00000181264.4|transmembrane protein 136 	ENST00000529187.1|TMEM136|ENSG00000181264.4|transmembrane protein 136
hg19_v2_chr20_+_62526467_62526540	0.380566	AAUACUG	ENST00000369911.2|DNAJC5|ENSG00000101152.6|DnaJ (Hsp40) homolog, subfamily C, member 5 	ENST00000360864.4|DNAJC5|ENSG00000101152.6|DnaJ (Hsp40) homolog, subfamily C, member 5
hg19_v2_chr12_+_79258547_79258607	0.380202	AAUACUG	ENST00000457153.2|SYT1|ENSG00000067715.9|synaptotagmin I
hg19_v2_chr8_+_32405728_32405749	0.379311	AAUACUG	ENST00000523079.1|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000338921.4|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000356819.4|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000287845.5|NRG1|ENSG00000157168.14|neuregulin 1 	ENST00000341377.5|NRG1|ENSG00000157168.14|neuregulin 1
hg19_v2_chr9_-_35732362_35732392	0.376623	AAUACUG	ENST00000314888.9|TLN1|ENSG00000137076.14|talin 1 	ENST00000540444.1|TLN1|ENSG00000137076.14|talin 1
hg19_v2_chr2_+_198669365_198669426	0.376374	AAUACUG	ENST00000428675.1|PLCL1|ENSG00000115896.11|phospholipase C-like 1
hg19_v2_chr13_-_33859819_33859910	0.374153	AAUACUG	ENST00000336934.5|STARD13|ENSG00000133121.16|StAR-related lipid transfer (START) domain containing 13
hg19_v2_chr7_-_73133959_73134022	0.373525	AAUACUG	ENST00000395155.3|STX1A|ENSG00000106089.7|syntaxin 1A (brain) 	ENST00000395154.3|STX1A|ENSG00000106089.7|syntaxin 1A (brain) 	ENST00000222812.3|STX1A|ENSG00000106089.7|syntaxin 1A (brain) 	ENST00000395156.3|STX1A|ENSG00000106089.7|syntaxin 1A (brain)
hg19_v2_chr9_-_73029540_73029540	0.372041	AAUACUG	ENST00000377126.2|KLF9|ENSG00000119138.3|Kruppel-like factor 9
hg19_v2_chr2_-_47168906_47168994	0.371104	AAUACUG	ENST00000444761.2|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2 	ENST00000409147.1|MCFD2|ENSG00000180398.7|multiple coagulation factor deficiency 2
hg19_v2_chr3_-_124774802_124774852	0.368464	AAUACUG	ENST00000311127.4|HEG1|ENSG00000173706.8|heart development protein with EGF-like domains 1
hg19_v2_chr17_+_5185552_5185595	0.363377	AAUACUG	ENST00000262477.6|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000408982.2|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000575991.1|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000537505.1|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1 	ENST00000546142.2|RABEP1|ENSG00000029725.12|rabaptin, RAB GTPase binding effector protein 1
hg19_v2_chr20_+_39765581_39765646	0.363116	AAUACUG	ENST00000244007.3|PLCG1|ENSG00000124181.10|phospholipase C, gamma 1
hg19_v2_chr12_-_8815404_8815438	0.362925	AAUACUG	ENST00000359478.2|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5 	ENST00000396549.2|MFAP5|ENSG00000197614.6|microfibrillar associated protein 5
hg19_v2_chr1_+_200708671_200708744	0.358843	AAUACUG	ENST00000358823.2|CAMSAP2|ENSG00000118200.10|calmodulin regulated spectrin-associated protein family, member 2
hg19_v2_chr8_-_48651648_48651648	0.358342	AAUACUG	ENST00000408965.3|CEBPD|ENSG00000221869.4|CCAAT/enhancer binding protein (C/EBP), delta
hg19_v2_chr3_+_141106643_141106681	0.354455	AAUACUG	ENST00000514251.1|ZBTB38|ENSG00000177311.6|zinc finger and BTB domain containing 38
hg19_v2_chr14_+_62229075_62229118	0.35214	AAUACUG	ENST00000216294.4|SNAPC1|ENSG00000023608.4|small nuclear RNA activating complex, polypeptide 1, 43kDa
hg19_v2_chr16_-_65155833_65155976	0.351682	AAUACUG	ENST00000566827.1|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast) 	ENST00000394156.3|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast) 	ENST00000562998.1|CDH11|ENSG00000140937.9|cadherin 11, type 2, OB-cadherin (osteoblast)
hg19_v2_chr20_+_52824367_52824409	0.351527	AAUACUG	ENST00000371419.2|PFDN4|ENSG00000101132.5|prefoldin subunit 4
hg19_v2_chr22_-_42017021_42017100	0.350481	AAUACUG	ENST00000263256.6|DESI1|ENSG00000100418.7|desumoylating isopeptidase 1
hg19_v2_chr3_-_182698381_182698431	0.347948	AAUACUG	ENST00000292782.4|DCUN1D1|ENSG00000043093.9|DCN1, defective in cullin neddylation 1, domain containing 1
hg19_v2_chr3_+_121903181_121903235	0.341816	AAUACUG	ENST00000498619.1|CASR|ENSG00000036828.9|calcium-sensing receptor
hg19_v2_chr9_-_123555655_123555712	0.340953	AAUACUG	ENST00000340778.5|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2 	ENST00000453291.1|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2 	ENST00000608872.1|FBXW2|ENSG00000119402.12|F-box and WD repeat domain containing 2
hg19_v2_chr8_-_8751068_8751158	0.340638	AAUACUG	ENST00000276282.6|MFHAS1|ENSG00000147324.6|malignant fibrous histiocytoma amplified sequence 1
hg19_v2_chr12_-_51611477_51611612	0.338389	AAUACUG	ENST00000389243.4|POU6F1|ENSG00000184271.11|POU class 6 homeobox 1
hg19_v2_chr7_-_35077653_35077653	0.336782	AAUACUG	ENST00000310974.4|DPY19L1|ENSG00000173852.9|dpy-19-like 1 (C. elegans)
hg19_v2_chr7_+_28452130_28452154	0.334368	AAUACUG	ENST00000357727.2|CREB5|ENSG00000146592.12|cAMP responsive element binding protein 5
hg19_v2_chr21_+_17102311_17102496	0.331615	AAUACUG	ENST00000285679.6|USP25|ENSG00000155313.11|ubiquitin specific peptidase 25 	ENST00000351097.5|USP25|ENSG00000155313.11|ubiquitin specific peptidase 25 	ENST00000285681.2|USP25|ENSG00000155313.11|ubiquitin specific peptidase 25 	ENST00000400183.2|USP25|ENSG00000155313.11|ubiquitin specific peptidase 25
hg19_v2_chr5_-_179050660_179050722	0.330808	AAUACUG	ENST00000519056.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000506721.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000503105.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000504348.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000508103.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000510431.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000515158.1|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000393432.4|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H) 	ENST00000442819.2|HNRNPH1|ENSG00000169045.13|heterogeneous nuclear ribonucleoprotein H1 (H)
hg19_v2_chr5_-_142783175_142783297	0.330629	AAUACUG	ENST00000231509.3|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 	ENST00000394464.2|NR3C1|ENSG00000113580.10|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)
hg19_v2_chrX_+_9754461_9754496	0.329945	AAUACUG	ENST00000380913.3|SHROOM2|ENSG00000146950.8|shroom family member 2
hg19_v2_chr19_+_2164126_2164168	0.329892	AAUACUG	ENST00000398665.3|DOT1L|ENSG00000104885.13|DOT1-like histone H3K79 methyltransferase
hg19_v2_chr9_-_34458531_34458582	0.329399	AAUACUG	ENST00000379089.1|FAM219A|ENSG00000164970.10|family with sequence similarity 219, member A 	ENST00000379087.1|FAM219A|ENSG00000164970.10|family with sequence similarity 219, member A 	ENST00000379084.1|FAM219A|ENSG00000164970.10|family with sequence similarity 219, member A 	ENST00000379081.1|FAM219A|ENSG00000164970.10|family with sequence similarity 219, member A 	ENST00000379080.1|FAM219A|ENSG00000164970.10|family with sequence similarity 219, member A 	ENST00000422409.1|FAM219A|ENSG00000164970.10|family with sequence similarity 219, member A 	ENST00000379078.1|FAM219A|ENSG00000164970.10|family with sequence similarity 219, member A 	ENST00000445726.1|FAM219A|ENSG00000164970.10|family with sequence similarity 219, member A 	ENST00000297620.4|FAM219A|ENSG00000164970.10|family with sequence similarity 219, member A
hg19_v2_chr10_+_64893039_64893128	0.32824	AAUACUG	ENST00000277746.6|NRBF2|ENSG00000148572.10|nuclear receptor binding factor 2 	ENST00000435510.2|NRBF2|ENSG00000148572.10|nuclear receptor binding factor 2
hg19_v2_chr12_+_72148614_72148699	0.322772	AAUACUG	ENST00000261263.3|RAB21|ENSG00000080371.4|RAB21, member RAS oncogene family
hg19_v2_chr6_+_163835669_163835693	0.321636	AAUACUG	ENST00000453779.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000275262.7|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000392127.2|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding 	ENST00000361752.3|QKI|ENSG00000112531.12|QKI, KH domain containing, RNA binding
hg19_v2_chr18_+_59000815_59000828	0.321514	AAUACUG	ENST00000262717.4|CDH20|ENSG00000101542.5|cadherin 20, type 2
hg19_v2_chr1_-_161059380_161059392	0.319732	AAUACUG	ENST00000368012.3|PVRL4|ENSG00000143217.7|poliovirus receptor-related 4
hg19_v2_chr1_-_154943212_154943230	0.319294	AAUACUG	ENST00000368445.5|SHC1|ENSG00000160691.14|SHC (Src homology 2 domain containing) transforming protein 1 	ENST00000448116.2|SHC1|ENSG00000160691.14|SHC (Src homology 2 domain containing) transforming protein 1 	ENST00000368449.4|SHC1|ENSG00000160691.14|SHC (Src homology 2 domain containing) transforming protein 1
hg19_v2_chr15_+_72766651_72766680	0.316925	AAUACUG	ENST00000379887.4|ARIH1|ENSG00000166233.8|ariadne RBR E3 ubiquitin protein ligase 1
hg19_v2_chr4_-_153457197_153457268	0.316891	AAUACUG	ENST00000281708.4|FBXW7|ENSG00000109670.9|F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase
hg19_v2_chr6_+_170863421_170863484	0.315824	AAUACUG	ENST00000392092.2|TBP|ENSG00000112592.8|TATA box binding protein 	ENST00000540980.1|TBP|ENSG00000112592.8|TATA box binding protein 	ENST00000230354.6|TBP|ENSG00000112592.8|TATA box binding protein
hg19_v2_chrX_+_53078273_53078273	0.30951	AAUACUG	ENST00000332582.4|GPR173|ENSG00000184194.5|G protein-coupled receptor 173
hg19_v2_chr3_-_129407535_129407575	0.309324	AAUACUG	ENST00000432054.2|TMCC1|ENSG00000172765.12|transmembrane and coiled-coil domain family 1
hg19_v2_chr8_+_106330920_106330979	0.305125	AAUACUG	ENST00000407775.2|ZFPM2|ENSG00000169946.9|zinc finger protein, FOG family member 2
hg19_v2_chr3_+_101292939_101293063	0.303655	AAUACUG	ENST00000265260.3|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000469941.1|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein 	ENST00000296024.5|PCNP|ENSG00000081154.7|PEST proteolytic signal containing nuclear protein
hg19_v2_chr1_+_2985760_2985775	0.303232	AAUACUG	ENST00000378391.2|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000514189.1|PRDM16|ENSG00000142611.12|PR domain containing 16 	ENST00000270722.5|PRDM16|ENSG00000142611.12|PR domain containing 16
hg19_v2_chr15_-_56535464_56535521	0.301985	AAUACUG	ENST00000559447.2|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000422057.1|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000317318.6|RFX7|ENSG00000181827.10|regulatory factor X, 7 	ENST00000423270.1|RFX7|ENSG00000181827.10|regulatory factor X, 7
hg19_v2_chrX_-_110038990_110038997	0.301419	AAUACUG	ENST00000372045.1|CHRDL1|ENSG00000101938.10|chordin-like 1 	ENST00000394797.4|CHRDL1|ENSG00000101938.10|chordin-like 1
hg19_v2_chr1_+_66999799_66999965	0.295231	AAUACUG	ENST00000371035.3|SGIP1|ENSG00000118473.17|SH3-domain GRB2-like (endophilin) interacting protein 1 	ENST00000371036.3|SGIP1|ENSG00000118473.17|SH3-domain GRB2-like (endophilin) interacting protein 1 	ENST00000371037.4|SGIP1|ENSG00000118473.17|SH3-domain GRB2-like (endophilin) interacting protein 1
hg19_v2_chr8_-_74884511_74884546	0.295007	AAUACUG	ENST00000518127.1|TCEB1|ENSG00000154582.12|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
hg19_v2_chr2_-_151344172_151344243	0.294296	AAUACUG	ENST00000375734.2|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000263895.4|RND3|ENSG00000115963.9|Rho family GTPase 3 	ENST00000454202.1|RND3|ENSG00000115963.9|Rho family GTPase 3
hg19_v2_chr20_+_58152524_58152566	0.291069	AAUACUG	ENST00000359926.3|PHACTR3|ENSG00000087495.12|phosphatase and actin regulator 3
hg19_v2_chr17_+_57274914_57274927	0.289904	AAUACUG	ENST00000582004.1|PRR11|ENSG00000068489.8|proline rich 11 	ENST00000577660.1|CTD-2510F5.6|ENSG00000265303.1|Uncharacterized protein
hg19_v2_chr7_-_132261253_132261323	0.28859	AAUACUG	ENST00000321063.4|PLXNA4|ENSG00000221866.5|plexin A4
hg19_v2_chr21_+_35445827_35445886	0.284	AAUACUG	ENST00000608209.1|SLC5A3|ENSG00000272962.1|sodium/myo-inositol cotransporter  	ENST00000381151.3|SLC5A3|ENSG00000198743.5|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3
hg19_v2_chr12_-_47219733_47219785	0.281805	AAUACUG	ENST00000547477.1|SLC38A4|ENSG00000139209.11|solute carrier family 38, member 4 	ENST00000447411.1|SLC38A4|ENSG00000139209.11|solute carrier family 38, member 4 	ENST00000266579.4|SLC38A4|ENSG00000139209.11|solute carrier family 38, member 4
hg19_v2_chr10_-_119806085_119806114	0.281725	AAUACUG	ENST00000355624.3|RAB11FIP2|ENSG00000107560.6|RAB11 family interacting protein 2 (class I)
hg19_v2_chr3_-_71774516_71774587	0.281636	AAUACUG	ENST00000425534.3|EIF4E3|ENSG00000163412.8|eukaryotic translation initiation factor 4E family member 3
hg19_v2_chr1_+_93811438_93811548	0.281165	AAUACUG	ENST00000370272.4|DR1|ENSG00000117505.8|down-regulator of transcription 1, TBP-binding (negative cofactor 2) 	ENST00000370267.1|DR1|ENSG00000117505.8|down-regulator of transcription 1, TBP-binding (negative cofactor 2)
hg19_v2_chr12_-_67072714_67072925	0.280852	AAUACUG	ENST00000545666.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000398016.3|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000359742.4|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000286445.7|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1 	ENST00000538211.1|GRIP1|ENSG00000155974.7|glutamate receptor interacting protein 1
hg19_v2_chrX_+_114827818_114827842	0.27983	AAUACUG	ENST00000420625.2|PLS3|ENSG00000102024.13|plastin 3
hg19_v2_chr7_-_26578407_26578451	0.279257	AAUACUG	ENST00000242109.3|KIAA0087|ENSG00000122548.3|KIAA0087
hg19_v2_chrX_+_136648297_136648319	0.27657	AAUACUG	ENST00000287538.5|ZIC3|ENSG00000156925.7|Zic family member 3
hg19_v2_chr17_-_62207485_62207511	0.275538	AAUACUG	ENST00000433197.3|ERN1|ENSG00000178607.11|endoplasmic reticulum to nucleus signaling 1
hg19_v2_chrX_-_54384425_54384495	0.268795	AAUACUG	ENST00000375169.3|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3 	ENST00000354646.2|WNK3|ENSG00000196632.6|WNK lysine deficient protein kinase 3
hg19_v2_chrX_-_119077695_119077757	0.262682	AAUACUG	ENST00000371410.3|NKAP|ENSG00000101882.5|NFKB activating protein
hg19_v2_chr12_+_119419294_119419308	0.262151	AAUACUG	ENST00000267260.4|SRRM4|ENSG00000139767.4|serine/arginine repetitive matrix 4
hg19_v2_chr6_+_64281906_64281922	0.261174	AAUACUG	ENST00000370651.3|PTP4A1|ENSG00000112245.6|protein tyrosine phosphatase type IVA, member 1
hg19_v2_chr11_-_115375107_115375283	0.260385	AAUACUG	ENST00000545380.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000452722.3|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000537058.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000536727.1|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000542447.2|CADM1|ENSG00000182985.12|cell adhesion molecule 1 	ENST00000331581.6|CADM1|ENSG00000182985.12|cell adhesion molecule 1
hg19_v2_chr7_+_39989611_39989716	0.258798	AAUACUG	ENST00000181839.4|CDK13|ENSG00000065883.10|cyclin-dependent kinase 13
hg19_v2_chr2_-_37193606_37193633	0.25605	AAUACUG	ENST00000379213.2|STRN|ENSG00000115808.7|striatin, calmodulin binding protein 	ENST00000263918.4|STRN|ENSG00000115808.7|striatin, calmodulin binding protein
hg19_v2_chr9_+_132934835_132934857	0.255234	AAUACUG	ENST00000372398.3|NCS1|ENSG00000107130.6|neuronal calcium sensor 1
hg19_v2_chr5_-_138775177_138775220	0.25485	AAUACUG	ENST00000302060.5|DNAJC18|ENSG00000170464.5|DnaJ (Hsp40) homolog, subfamily C, member 18
hg19_v2_chr3_-_56835967_56835995	0.253422	AAUACUG	ENST00000495373.1|ARHGEF3|ENSG00000163947.7|Rho guanine nucleotide exchange factor (GEF) 3 	ENST00000296315.3|ARHGEF3|ENSG00000163947.7|Rho guanine nucleotide exchange factor (GEF) 3
hg19_v2_chr3_+_10857885_10857920	0.249937	AAUACUG	ENST00000254488.2|SLC6A11|ENSG00000132164.5|solute carrier family 6 (neurotransmitter transporter), member 11 	ENST00000454147.1|SLC6A11|ENSG00000132164.5|solute carrier family 6 (neurotransmitter transporter), member 11
hg19_v2_chr16_+_9185450_9185516	0.24924	AAUACUG	ENST00000327827.7|C16orf72|ENSG00000182831.7|chromosome 16 open reading frame 72
hg19_v2_chr17_-_79829190_79829282	0.244027	AAUACUG	ENST00000581876.1|ARHGDIA|ENSG00000141522.7|Rho GDP dissociation inhibitor (GDI) alpha 	ENST00000584461.1|ARHGDIA|ENSG00000141522.7|Rho GDP dissociation inhibitor (GDI) alpha 	ENST00000583868.1|ARHGDIA|ENSG00000141522.7|Rho GDP dissociation inhibitor (GDI) alpha 	ENST00000400721.4|ARHGDIA|ENSG00000141522.7|Rho GDP dissociation inhibitor (GDI) alpha 	ENST00000269321.7|ARHGDIA|ENSG00000141522.7|Rho GDP dissociation inhibitor (GDI) alpha
hg19_v2_chr2_-_73053126_73053184	0.243767	AAUACUG	ENST00000272427.6|EXOC6B|ENSG00000144036.10|exocyst complex component 6B 	ENST00000410104.1|EXOC6B|ENSG00000144036.10|exocyst complex component 6B
hg19_v2_chr5_-_132299313_132299334	0.242061	AAUACUG	ENST00000265343.5|AFF4|ENSG00000072364.8|AF4/FMR2 family, member 4
hg19_v2_chr16_+_57279004_57279050	0.239286	AAUACUG	ENST00000219204.3|ARL2BP|ENSG00000102931.3|ADP-ribosylation factor-like 2 binding protein
hg19_v2_chr16_-_22385901_22385947	0.239001	AAUACUG	ENST00000268383.2|CDR2|ENSG00000140743.3|cerebellar degeneration-related protein 2, 62kDa
hg19_v2_chr12_-_96794143_96794264	0.237749	AAUACUG	ENST00000543119.2|CDK17|ENSG00000059758.3|cyclin-dependent kinase 17
hg19_v2_chr16_-_20911641_20911720	0.237333	AAUACUG	ENST00000564349.1|ERI2|ENSG00000196678.9|ERI1 exoribonuclease family member 2 	ENST00000324344.4|DCUN1D3|ENSG00000188215.5|DCN1, defective in cullin neddylation 1, domain containing 3
hg19_v2_chrX_-_19988382_19988416	0.236205	AAUACUG	ENST00000356980.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379687.3|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23 	ENST00000379682.4|CXorf23|ENSG00000173681.12|chromosome X open reading frame 23
hg19_v2_chr1_-_52456352_52456436	0.232979	AAUACUG	ENST00000371655.3|RAB3B|ENSG00000169213.6|RAB3B, member RAS oncogene family
hg19_v2_chr6_-_30585009_30585028	0.231922	AAUACUG	ENST00000376511.2|PPP1R10|ENSG00000204569.5|protein phosphatase 1, regulatory subunit 10
hg19_v2_chr8_-_67579418_67579498	0.231804	AAUACUG	ENST00000310421.4|VCPIP1|ENSG00000175073.7|valosin containing protein (p97)/p47 complex interacting protein 1
hg19_v2_chr17_-_18162230_18162366	0.231634	AAUACUG	ENST00000327031.4|FLII|ENSG00000177731.11|flightless I homolog (Drosophila)
hg19_v2_chr10_+_12171721_12171732	0.230888	AAUACUG	ENST00000379020.4|SEC61A2|ENSG00000065665.16|Sec61 alpha 2 subunit (S. cerevisiae) 	ENST00000379017.3|SEC61A2|ENSG00000065665.16|Sec61 alpha 2 subunit (S. cerevisiae)
hg19_v2_chrX_-_11445856_11445943	0.230463	AAUACUG	ENST00000380736.1|ARHGAP6|ENSG00000047648.17|Rho GTPase activating protein 6
hg19_v2_chr2_+_210867341_210867386	0.229292	AAUACUG	ENST00000408981.2|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000454822.1|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000429921.1|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000453724.1|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000540255.1|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000438265.1|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000429907.1|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000441588.1|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000445268.1|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000452025.1|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000438204.2|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000411934.2|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000435437.2|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase 	ENST00000354506.6|RPE|ENSG00000197713.10|ribulose-5-phosphate-3-epimerase
hg19_v2_chr9_-_101471479_101471522	0.227283	AAUACUG	ENST00000259455.2|GABBR2|ENSG00000136928.4|gamma-aminobutyric acid (GABA) B receptor, 2
hg19_v2_chr2_-_164592497_164592573	0.226821	AAUACUG	ENST00000333129.3|FIGN|ENSG00000182263.9|fidgetin 	ENST00000409634.1|FIGN|ENSG00000182263.9|fidgetin
hg19_v2_chr9_+_100745615_100745648	0.224129	AAUACUG	ENST00000339399.4|ANP32B|ENSG00000136938.8|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
hg19_v2_chr15_+_38544476_38544574	0.223101	AAUACUG	ENST00000299084.4|SPRED1|ENSG00000166068.8|sprouty-related, EVH1 domain containing 1
hg19_v2_chr20_-_60640866_60640901	0.222352	AAUACUG	ENST00000252996.4|TAF4|ENSG00000130699.12|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa
hg19_v2_chr8_+_11561660_11561751	0.222028	AAUACUG	ENST00000526716.1|GATA4|ENSG00000136574.13|GATA binding protein 4 	ENST00000335135.4|GATA4|ENSG00000136574.13|GATA binding protein 4 	ENST00000528027.1|GATA4|ENSG00000136574.13|GATA binding protein 4
hg19_v2_chr9_+_78505581_78505621	0.221246	AAUACUG	ENST00000376767.3|PCSK5|ENSG00000099139.9|proprotein convertase subtilisin/kexin type 5 	ENST00000376752.4|PCSK5|ENSG00000099139.9|proprotein convertase subtilisin/kexin type 5
hg19_v2_chr20_+_31350184_31350230	0.216875	AAUACUG	ENST00000328111.2|DNMT3B|ENSG00000088305.14|DNA (cytosine-5-)-methyltransferase 3 beta 	ENST00000353855.2|DNMT3B|ENSG00000088305.14|DNA (cytosine-5-)-methyltransferase 3 beta 	ENST00000348286.2|DNMT3B|ENSG00000088305.14|DNA (cytosine-5-)-methyltransferase 3 beta
hg19_v2_chr5_+_7396141_7396324	0.21611	AAUACUG	ENST00000338316.4|ADCY2|ENSG00000078295.11|adenylate cyclase 2 (brain)
hg19_v2_chr10_-_98273668_98273688	0.215613	AAUACUG	ENST00000357947.3|TLL2|ENSG00000095587.8|tolloid-like 2
hg19_v2_chr3_-_128212016_128212051	0.214698	AAUACUG	ENST00000498200.1|GATA2|ENSG00000179348.7|GATA binding protein 2 	ENST00000341105.2|GATA2|ENSG00000179348.7|GATA binding protein 2
hg19_v2_chr12_-_31744031_31744059	0.214485	AAUACUG	ENST00000389082.5|DENND5B|ENSG00000170456.10|DENN/MADD domain containing 5B
hg19_v2_chr3_+_33155444_33155492	0.21378	AAUACUG	ENST00000320954.6|CRTAP|ENSG00000170275.10|cartilage associated protein
hg19_v2_chr5_-_98262240_98262240	0.212739	AAUACUG	ENST00000284049.3|CHD1|ENSG00000153922.6|chromodomain helicase DNA binding protein 1
hg19_v2_chr1_+_52521928_52521948	0.21195	AAUACUG	ENST00000489308.2|BTF3L4|ENSG00000134717.13|basic transcription factor 3-like 4
hg19_v2_chr8_-_57906362_57906452	0.209016	AAUACUG	ENST00000262644.4|IMPAD1|ENSG00000104331.4|inositol monophosphatase domain containing 1
hg19_v2_chr11_-_62314268_62314307	0.206929	AAUACUG	ENST00000257247.7|AHNAK|ENSG00000124942.9|AHNAK nucleoprotein 	ENST00000531324.1|AHNAK|ENSG00000124942.9|AHNAK nucleoprotein 	ENST00000378024.4|AHNAK|ENSG00000124942.9|AHNAK nucleoprotein
hg19_v2_chr17_+_64298944_64298944	0.206319	AAUACUG	ENST00000413366.3|PRKCA|ENSG00000154229.7|protein kinase C, alpha
hg19_v2_chr12_+_27677085_27677189	0.205951	AAUACUG	ENST00000545334.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000540114.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000537927.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000318304.8|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000535047.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000542629.1|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1) 	ENST00000228425.6|PPFIBP1|ENSG00000110841.9|PTPRF interacting protein, binding protein 1 (liprin beta 1)
hg19_v2_chr10_+_114206956_114207040	0.205074	AAUACUG	ENST00000432306.1|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A 	ENST00000393077.2|VTI1A|ENSG00000151532.9|vesicle transport through interaction with t-SNAREs 1A
hg19_v2_chrX_+_16804544_16804613	0.204529	AAUACUG	ENST00000380122.5|TXLNG|ENSG00000086712.8|taxilin gamma 	ENST00000398155.4|TXLNG|ENSG00000086712.8|taxilin gamma
hg19_v2_chr2_+_153574428_153574428	0.204347	AAUACUG	ENST00000326446.5|ARL6IP6|ENSG00000177917.6|ADP-ribosylation-like factor 6 interacting protein 6
hg19_v2_chr5_+_143584814_143584840	0.204235	AAUACUG	ENST00000507359.3|KCTD16|ENSG00000183775.6|potassium channel tetramerization domain containing 16
hg19_v2_chr8_+_12803176_12803195	0.204039	AAUACUG	ENST00000524591.2|KIAA1456|ENSG00000250305.4|KIAA1456
hg19_v2_chr4_+_87515454_87515486	0.203385	AAUACUG	ENST00000427191.2|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 	ENST00000436978.1|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 	ENST00000502971.1|PTPN13|ENSG00000163629.8|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)
hg19_v2_chr18_+_59854480_59854551	0.203059	AAUACUG	ENST00000256858.6|KIAA1468|ENSG00000134444.9|KIAA1468 	ENST00000398130.2|KIAA1468|ENSG00000134444.9|KIAA1468
hg19_v2_chr10_+_76871454_76871467	0.202724	AAUACUG	ENST00000372687.4|SAMD8|ENSG00000156671.8|sterile alpha motif domain containing 8
hg19_v2_chr10_-_11653753_11653806	0.202327	AAUACUG	ENST00000609104.1|USP6NL|ENSG00000148429.10|USP6 N-terminal like
hg19_v2_chr3_+_142838091_142838173	0.201579	AAUACUG	ENST00000309575.3|CHST2|ENSG00000175040.4|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2
hg19_v2_chr8_+_95835438_95835537	0.201305	AAUACUG	ENST00000521860.1|INTS8|ENSG00000164941.9|integrator complex subunit 8 	ENST00000519457.1|INTS8|ENSG00000164941.9|integrator complex subunit 8 	ENST00000519053.1|INTS8|ENSG00000164941.9|integrator complex subunit 8 	ENST00000523731.1|INTS8|ENSG00000164941.9|integrator complex subunit 8 	ENST00000447247.1|INTS8|ENSG00000164941.9|integrator complex subunit 8
hg19_v2_chr14_-_31495569_31495636	0.198699	AAUACUG	ENST00000357479.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3 	ENST00000355683.5|STRN3|ENSG00000196792.7|striatin, calmodulin binding protein 3
hg19_v2_chr13_+_39261224_39261266	0.197293	AAUACUG	ENST00000280481.7|FREM2|ENSG00000150893.9|FRAS1 related extracellular matrix protein 2
hg19_v2_chr12_+_113659234_113659300	0.194872	AAUACUG	ENST00000551096.1|TPCN1|ENSG00000186815.8|two pore segment channel 1 	ENST00000551099.1|TPCN1|ENSG00000186815.8|two pore segment channel 1 	ENST00000335509.6|TPCN1|ENSG00000186815.8|two pore segment channel 1 	ENST00000552897.1|TPCN1|ENSG00000186815.8|two pore segment channel 1 	ENST00000550785.1|TPCN1|ENSG00000186815.8|two pore segment channel 1 	ENST00000549279.1|TPCN1|ENSG00000186815.8|two pore segment channel 1
hg19_v2_chr9_+_133454943_133455020	0.19454	AAUACUG	ENST00000319725.9|FUBP3|ENSG00000107164.15|far upstream element (FUSE) binding protein 3
hg19_v2_chr8_-_28243934_28243993	0.192005	AAUACUG	ENST00000521185.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000520290.1|ZNF395|ENSG00000186918.9|zinc finger protein 395 	ENST00000344423.5|ZNF395|ENSG00000186918.9|zinc finger protein 395
hg19_v2_chr18_+_43304092_43304121	0.191925	AAUACUG	ENST00000321925.4|SLC14A1|ENSG00000141469.12|solute carrier family 14 (urea transporter), member 1 (Kidd blood group) 	ENST00000587601.1|SLC14A1|ENSG00000141469.12|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)
hg19_v2_chr3_-_33138286_33138327	0.190532	AAUACUG	ENST00000416695.2|TMPPE|ENSG00000188167.4|transmembrane protein with metallophosphoesterase domain 	ENST00000342462.4|TMPPE|ENSG00000188167.4|transmembrane protein with metallophosphoesterase domain 	ENST00000399402.3|GLB1|ENSG00000170266.11|galactosidase, beta 1
hg19_v2_chr16_-_23160591_23160787	0.189742	AAUACUG	ENST00000219689.7|USP31|ENSG00000103404.10|ubiquitin specific peptidase 31
hg19_v2_chr4_-_90229142_90229217	0.189645	AAUACUG	ENST00000609438.1|GPRIN3|ENSG00000185477.4|GPRIN family member 3
hg19_v2_chr17_+_66508537_66508650	0.189104	AAUACUG	ENST00000392711.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000585427.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000589228.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000536854.2|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000588702.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha 	ENST00000589309.1|PRKAR1A|ENSG00000108946.10|protein kinase, cAMP-dependent, regulatory, type I, alpha
hg19_v2_chr3_-_125313934_125313934	0.18894	AAUACUG	ENST00000296220.5|OSBPL11|ENSG00000144909.7|oxysterol binding protein-like 11
hg19_v2_chr10_-_104262426_104262437	0.188483	AAUACUG	ENST00000487599.1|ACTR1A|ENSG00000138107.7|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)
hg19_v2_chr12_+_14518598_14518663	0.184359	AAUACUG	ENST00000261168.4|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000538511.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000545723.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000543189.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein 	ENST00000536444.1|ATF7IP|ENSG00000171681.8|activating transcription factor 7 interacting protein
hg19_v2_chr8_+_1449532_1449532	0.183984	AAUACUG	ENST00000421627.2|DLGAP2|ENSG00000198010.7|discs, large (Drosophila) homolog-associated protein 2
hg19_v2_chr2_-_9770706_9770753	0.183631	AAUACUG	ENST00000381844.4|YWHAQ|ENSG00000134308.9|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta
hg19_v2_chr20_+_61448376_61448418	0.183459	AAUACUG	ENST00000343916.3|COL9A3|ENSG00000092758.11|collagen, type IX, alpha 3
hg19_v2_chr7_-_75988321_75988348	0.18263	AAUACUG	ENST00000307630.3|YWHAG|ENSG00000170027.5|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
hg19_v2_chr10_-_88281494_88281572	0.182626	AAUACUG	ENST00000298767.5|WAPAL|ENSG00000062650.13|wings apart-like homolog (Drosophila)
hg19_v2_chr8_+_42128812_42128859	0.181281	AAUACUG	ENST00000520810.1|IKBKB|ENSG00000104365.9|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta 	ENST00000416505.2|IKBKB|ENSG00000104365.9|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta 	ENST00000519735.1|IKBKB|ENSG00000104365.9|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta 	ENST00000520835.1|IKBKB|ENSG00000104365.9|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta 	ENST00000379708.3|IKBKB|ENSG00000104365.9|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
hg19_v2_chr3_+_48956249_48956330	0.181097	AAUACUG	ENST00000452882.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000430423.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000356401.4|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000449376.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000420814.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000449729.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2 	ENST00000433170.1|ARIH2|ENSG00000177479.15|ariadne RBR E3 ubiquitin protein ligase 2
hg19_v2_chr10_+_74033672_74033688	0.178911	AAUACUG	ENST00000307365.3|DDIT4|ENSG00000168209.4|DNA-damage-inducible transcript 4
hg19_v2_chr2_-_227664474_227664508	0.177127	AAUACUG	ENST00000305123.5|IRS1|ENSG00000169047.5|insulin receptor substrate 1
hg19_v2_chr14_+_67707826_67707994	0.175451	AAUACUG	ENST00000261681.4|MPP5|ENSG00000072415.4|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
hg19_v2_chr18_-_60987220_60987386	0.174558	AAUACUG	ENST00000398117.1|BCL2|ENSG00000171791.10|B-cell CLL/lymphoma 2
hg19_v2_chr1_-_95392635_95392834	0.174472	AAUACUG	ENST00000538964.1|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000394202.4|CNN3|ENSG00000117519.11|calponin 3, acidic 	ENST00000370206.4|CNN3|ENSG00000117519.11|calponin 3, acidic
hg19_v2_chr5_-_141392538_141392606	0.173551	AAUACUG	ENST00000503794.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000510194.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000504424.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000513454.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000458112.2|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000542860.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000503229.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000500692.2|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000311337.6|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000504139.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1 	ENST00000505689.1|GNPDA1|ENSG00000113552.11|glucosamine-6-phosphate deaminase 1
hg19_v2_chr6_-_57087042_57087128	0.169749	AAUACUG	ENST00000317483.3|RAB23|ENSG00000112210.7|RAB23, member RAS oncogene family
hg19_v2_chr7_+_6414128_6414185	0.167191	AAUACUG	ENST00000348035.4|RAC1|ENSG00000136238.13|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 	ENST00000356142.4|RAC1|ENSG00000136238.13|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)
hg19_v2_chr17_-_56084578_56084707	0.162751	AAUACUG	ENST00000582730.2|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000584773.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000585096.1|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1 	ENST00000258962.4|SRSF1|ENSG00000136450.8|serine/arginine-rich splicing factor 1
hg19_v2_chr16_+_7382745_7382769	0.161665	AAUACUG	ENST00000436368.2|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000311745.5|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000355637.4|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1 	ENST00000340209.4|RBFOX1|ENSG00000078328.15|RNA binding protein, fox-1 homolog (C. elegans) 1
hg19_v2_chr3_-_149688896_149688970	0.161375	AAUACUG	ENST00000239940.7|PFN2|ENSG00000070087.9|profilin 2
hg19_v2_chr1_+_93544791_93544807	0.161238	AAUACUG	ENST00000545708.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000540243.1|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2 	ENST00000370298.4|MTF2|ENSG00000143033.13|metal response element binding transcription factor 2
hg19_v2_chr12_+_96588143_96588185	0.161023	AAUACUG	ENST00000228741.3|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2) 	ENST00000547249.1|ELK3|ENSG00000111145.3|ELK3, ETS-domain protein (SRF accessory protein 2)
hg19_v2_chr10_+_11206925_11206993	0.160261	AAUACUG	ENST00000354440.2|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000315874.4|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2 	ENST00000427450.1|CELF2|ENSG00000048740.13|CUGBP, Elav-like family member 2
hg19_v2_chr1_+_181057638_181057692	0.15995	AAUACUG	ENST00000367577.4|IER5|ENSG00000162783.8|immediate early response 5
hg19_v2_chr10_+_112404132_112404155	0.158121	AAUACUG	ENST00000369519.3|RBM20|ENSG00000203867.7|RNA binding motif protein 20
hg19_v2_chr16_+_69221028_69221092	0.156677	AAUACUG	ENST00000336278.4|SNTB2|ENSG00000168807.12|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
hg19_v2_chr2_-_36825281_36825342	0.156282	AAUACUG	ENST00000405912.3|FEZ2|ENSG00000171055.10|fasciculation and elongation protein zeta 2 (zygin II) 	ENST00000379245.4|FEZ2|ENSG00000171055.10|fasciculation and elongation protein zeta 2 (zygin II)
hg19_v2_chr2_+_28974668_28974729	0.155784	AAUACUG	ENST00000296122.6|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme 	ENST00000395366.2|PPP1CB|ENSG00000213639.5|protein phosphatase 1, catalytic subunit, beta isozyme
hg19_v2_chr7_-_11871815_11871831	0.155597	AAUACUG	ENST00000423059.4|THSD7A|ENSG00000005108.11|thrombospondin, type I, domain containing 7A
hg19_v2_chr3_-_196159268_196159345	0.154659	AAUACUG	ENST00000381887.3|UBXN7|ENSG00000163960.7|UBX domain protein 7 	ENST00000535858.1|UBXN7|ENSG00000163960.7|UBX domain protein 7 	ENST00000428095.1|UBXN7|ENSG00000163960.7|UBX domain protein 7 	ENST00000296328.4|UBXN7|ENSG00000163960.7|UBX domain protein 7
hg19_v2_chrX_+_146993449_146993498	0.154391	AAUACUG	ENST00000218200.8|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370471.3|FMR1|ENSG00000102081.9|fragile X mental retardation 1 	ENST00000370477.1|FMR1|ENSG00000102081.9|fragile X mental retardation 1
hg19_v2_chr18_+_55102917_55102985	0.153593	AAUACUG	ENST00000491143.2|ONECUT2|ENSG00000119547.5|one cut homeobox 2
hg19_v2_chr9_-_93405352_93405386	0.152788	AAUACUG	ENST00000375765.3|DIRAS2|ENSG00000165023.5|DIRAS family, GTP-binding RAS-like 2
hg19_v2_chr7_-_134896234_134896316	0.150663	AAUACUG	ENST00000354475.4|WDR91|ENSG00000105875.9|WD repeat domain 91 	ENST00000344400.5|WDR91|ENSG00000105875.9|WD repeat domain 91
hg19_v2_chr16_+_57220193_57220253	0.148226	AAUACUG	ENST00000564435.1|RSPRY1|ENSG00000159579.9|ring finger and SPRY domain containing 1 	ENST00000562959.1|RSPRY1|ENSG00000159579.9|ring finger and SPRY domain containing 1 	ENST00000394420.4|RSPRY1|ENSG00000159579.9|ring finger and SPRY domain containing 1 	ENST00000568505.2|RSPRY1|ENSG00000159579.9|ring finger and SPRY domain containing 1 	ENST00000537866.1|RSPRY1|ENSG00000159579.9|ring finger and SPRY domain containing 1
hg19_v2_chr6_-_110500905_110500921	0.147775	AAUACUG	ENST00000392587.2|WASF1|ENSG00000112290.8|WAS protein family, member 1
hg19_v2_chr18_-_33647487_33647547	0.146533	AAUACUG	ENST00000590898.1|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A 	ENST00000357384.4|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A 	ENST00000319040.6|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A 	ENST00000588737.1|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A 	ENST00000399022.4|RPRD1A|ENSG00000141425.13|regulation of nuclear pre-mRNA domain containing 1A
hg19_v2_chr1_+_197881592_197881635	0.146072	AAUACUG	ENST00000367391.1|LHX9|ENSG00000143355.11|LIM homeobox 9 	ENST00000367390.3|LHX9|ENSG00000143355.11|LIM homeobox 9
hg19_v2_chr4_-_6383594_6383600	0.145949	AAUACUG	ENST00000335585.5|PPP2R2C|ENSG00000074211.9|protein phosphatase 2, regulatory subunit B, gamma
hg19_v2_chr10_-_5855350_5855512	0.145919	AAUACUG	ENST00000456041.1|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000380181.3|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000418688.1|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000380132.4|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000609712.1|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2 	ENST00000380191.4|GDI2|ENSG00000057608.12|GDP dissociation inhibitor 2
hg19_v2_chr17_+_41052808_41052826	0.143231	AAUACUG	ENST00000592383.1|G6PC|ENSG00000131482.5|glucose-6-phosphatase, catalytic subunit 	ENST00000253801.2|G6PC|ENSG00000131482.5|glucose-6-phosphatase, catalytic subunit 	ENST00000585489.1|G6PC|ENSG00000131482.5|glucose-6-phosphatase, catalytic subunit
hg19_v2_chr4_+_141445311_141445332	0.143059	AAUACUG	ENST00000323570.3|ELMOD2|ENSG00000179387.5|ELMO/CED-12 domain containing 2 	ENST00000511887.2|ELMOD2|ENSG00000179387.5|ELMO/CED-12 domain containing 2
hg19_v2_chr1_+_33283043_33283198	0.142925	AAUACUG	ENST00000373476.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000373475.5|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000529027.1|S100PBP|ENSG00000116497.13|S100P binding protein 	ENST00000398243.3|S100PBP|ENSG00000116497.13|S100P binding protein
hg19_v2_chr2_+_113033164_113033219	0.142445	AAUACUG	ENST00000409871.1|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6 	ENST00000343936.4|ZC3H6|ENSG00000188177.9|zinc finger CCCH-type containing 6
hg19_v2_chr1_+_50574585_50574638	0.142177	AAUACUG	ENST00000371824.1|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4 	ENST00000371823.4|ELAVL4|ENSG00000162374.12|ELAV like neuron-specific RNA binding protein 4
hg19_v2_chr2_+_206547215_206547232	0.139843	AAUACUG	ENST00000360409.3|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000540178.1|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000540841.1|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000355117.4|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000450507.1|NRP2|ENSG00000118257.12|neuropilin 2 	ENST00000417189.1|NRP2|ENSG00000118257.12|neuropilin 2
hg19_v2_chr12_+_12870055_12870119	0.136037	AAUACUG	ENST00000228872.4|CDKN1B|ENSG00000111276.6|cyclin-dependent kinase inhibitor 1B (p27, Kip1)
hg19_v2_chr1_+_87380299_87380475	0.135995	AAUACUG	ENST00000370551.4|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1 	ENST00000370550.5|HS2ST1|ENSG00000153936.12|heparan sulfate 2-O-sulfotransferase 1
hg19_v2_chr10_+_105726862_105726986	0.135973	AAUACUG	ENST00000335753.4|SLK|ENSG00000065613.9|STE20-like kinase 	ENST00000369755.3|SLK|ENSG00000065613.9|STE20-like kinase
hg19_v2_chr2_+_166095898_166095940	0.135534	AAUACUG	ENST00000424833.1|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000375437.2|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit 	ENST00000357398.3|SCN2A|ENSG00000136531.9|sodium channel, voltage-gated, type II, alpha subunit
hg19_v2_chr8_-_89339705_89339721	0.13515	AAUACUG	ENST00000286614.6|MMP16|ENSG00000156103.11|matrix metallopeptidase 16 (membrane-inserted)
hg19_v2_chr8_-_13372395_13372429	0.134472	AAUACUG	ENST00000276297.4|DLC1|ENSG00000164741.10|deleted in liver cancer 1 	ENST00000511869.1|DLC1|ENSG00000164741.10|deleted in liver cancer 1
hg19_v2_chr11_+_74459876_74459930	0.134392	AAUACUG	ENST00000299563.4|RNF169|ENSG00000166439.5|ring finger protein 169
hg19_v2_chr14_-_73925225_73925323	0.133699	AAUACUG	ENST00000356296.4|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000355058.3|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000359560.3|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000557597.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000554394.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000555238.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000535282.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000555987.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000555394.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila) 	ENST00000554546.1|NUMB|ENSG00000133961.15|numb homolog (Drosophila)
hg19_v2_chr10_-_30348439_30348531	0.131555	AAUACUG	ENST00000375377.1|KIAA1462|ENSG00000165757.8|KIAA1462
hg19_v2_chr15_+_40532058_40532072	0.129832	AAUACUG	ENST00000260404.4|PAK6|ENSG00000137843.7|p21 protein (Cdc42/Rac)-activated kinase 6
hg19_v2_chr6_-_97285336_97285378	0.12773	AAUACUG	ENST00000229955.3|GPR63|ENSG00000112218.7|G protein-coupled receptor 63 	ENST00000417980.1|GPR63|ENSG00000112218.7|G protein-coupled receptor 63
hg19_v2_chr18_+_55018044_55018044	0.125662	AAUACUG	ENST00000324000.3|ST8SIA3|ENSG00000177511.5|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3
hg19_v2_chr15_+_76196200_76196227	0.123819	AAUACUG	ENST00000308275.3|FBXO22|ENSG00000167196.9|F-box protein 22 	ENST00000453211.2|FBXO22|ENSG00000167196.9|F-box protein 22
hg19_v2_chr10_+_27793197_27793247	0.123489	AAUACUG	ENST00000356940.6|RAB18|ENSG00000099246.12|RAB18, member RAS oncogene family 	ENST00000535776.1|RAB18|ENSG00000099246.12|RAB18, member RAS oncogene family
hg19_v2_chr18_-_57027194_57027194	0.123209	AAUACUG	ENST00000251047.5|LMAN1|ENSG00000074695.5|lectin, mannose-binding, 1
hg19_v2_chr12_+_45609893_45609909	0.12237	AAUACUG	ENST00000320560.8|ANO6|ENSG00000177119.11|anoctamin 6
hg19_v2_chr2_+_99953816_99953894	0.12218	AAUACUG	ENST00000289371.6|EIF5B|ENSG00000158417.6|eukaryotic translation initiation factor 5B
hg19_v2_chr9_-_16870704_16870841	0.122084	AAUACUG	ENST00000380672.4|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380667.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000380666.2|BNC2|ENSG00000173068.13|basonuclin 2 	ENST00000486514.1|BNC2|ENSG00000173068.13|basonuclin 2
hg19_v2_chr19_-_4400415_4400570	0.120818	AAUACUG	ENST00000598564.1|SH3GL1|ENSG00000141985.5|SH3-domain GRB2-like 1 	ENST00000417295.2|SH3GL1|ENSG00000141985.5|SH3-domain GRB2-like 1 	ENST00000269886.3|SH3GL1|ENSG00000141985.5|SH3-domain GRB2-like 1
hg19_v2_chr5_+_133984462_133984514	0.1199	AAUACUG	ENST00000398844.2|SEC24A|ENSG00000113615.8|SEC24 family member A 	ENST00000322887.4|SEC24A|ENSG00000113615.8|SEC24 family member A
hg19_v2_chr7_-_4998802_4998861	0.11987	AAUACUG	ENST00000406755.1|MMD2|ENSG00000136297.10|monocyte to macrophage differentiation-associated 2 	ENST00000404774.3|MMD2|ENSG00000136297.10|monocyte to macrophage differentiation-associated 2 	ENST00000401401.3|MMD2|ENSG00000136297.10|monocyte to macrophage differentiation-associated 2
hg19_v2_chr5_-_41510656_41510713	0.11898	AAUACUG	ENST00000377801.3|PLCXD3|ENSG00000182836.5|phosphatidylinositol-specific phospholipase C, X domain containing 3
hg19_v2_chr13_-_53422640_53422780	0.117122	AAUACUG	ENST00000338862.4|PCDH8|ENSG00000136099.9|protocadherin 8 	ENST00000377942.3|PCDH8|ENSG00000136099.9|protocadherin 8
hg19_v2_chr22_+_21771656_21771693	0.116272	AAUACUG	ENST00000407464.2|HIC2|ENSG00000169635.5|hypermethylated in cancer 2
hg19_v2_chr9_+_115513003_115513137	0.116175	AAUACUG	ENST00000374232.3|SNX30|ENSG00000148158.12|sorting nexin family member 30
hg19_v2_chr3_+_182511266_182511308	0.115769	AAUACUG	ENST00000323116.5|ATP11B|ENSG00000058063.11|ATPase, class VI, type 11B 	ENST00000493826.1|ATP11B|ENSG00000058063.11|ATPase, class VI, type 11B
hg19_v2_chr4_-_83295103_83295157	0.115615	AAUACUG	ENST00000313899.7|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 	ENST00000352301.4|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 	ENST00000509107.1|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 	ENST00000353341.4|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 	ENST00000541060.1|HNRNPD|ENSG00000138668.14|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
hg19_v2_chr2_+_9614652_9614704	0.115004	AAUACUG	ENST00000497473.1|IAH1|ENSG00000134330.14|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae) 	ENST00000470914.1|IAH1|ENSG00000134330.14|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae) 	ENST00000481367.1|IAH1|ENSG00000134330.14|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae) 	ENST00000545602.1|IAH1|ENSG00000134330.14|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)
hg19_v2_chr9_+_33265011_33265059	0.111913	AAUACUG	ENST00000419016.2|CHMP5|ENSG00000086065.9|charged multivesicular body protein 5
hg19_v2_chr5_+_77656339_77656362	0.110566	AAUACUG	ENST00000538629.1|SCAMP1|ENSG00000085365.13|secretory carrier membrane protein 1
hg19_v2_chr22_+_40297079_40297104	0.109914	AAUACUG	ENST00000344138.4|GRAP2|ENSG00000100351.12|GRB2-related adaptor protein 2 	ENST00000543252.1|GRAP2|ENSG00000100351.12|GRB2-related adaptor protein 2
hg19_v2_chr17_-_7518145_7518234	0.108952	AAUACUG	ENST00000250113.7|FXR2|ENSG00000129245.7|fragile X mental retardation, autosomal homolog 2 	ENST00000571597.1|FXR2|ENSG00000129245.7|fragile X mental retardation, autosomal homolog 2
hg19_v2_chr11_+_129939779_129939801	0.108535	AAUACUG	ENST00000533195.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000533713.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000528499.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000539648.1|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2 	ENST00000263574.5|APLP2|ENSG00000084234.12|amyloid beta (A4) precursor-like protein 2
hg19_v2_chr1_-_72748417_72748510	0.1079	AAUACUG	ENST00000357731.5|NEGR1|ENSG00000172260.9|neuronal growth regulator 1
hg19_v2_chr3_+_128444965_128444985	0.105806	AAUACUG	ENST00000265062.3|RAB7A|ENSG00000075785.8|RAB7A, member RAS oncogene family
hg19_v2_chrX_+_9983602_9983602	0.104307	AAUACUG	ENST00000380861.4|WWC3|ENSG00000047644.13|WWC family member 3
hg19_v2_chr6_+_1389989_1390069	0.103487	AAUACUG	ENST00000259806.1|FOXF2|ENSG00000137273.3|forkhead box F2
hg19_v2_chr16_+_69373323_69373371	0.10249	AAUACUG	ENST00000254940.5|NIP7|ENSG00000132603.9|NIP7, nucleolar pre-rRNA processing protein
hg19_v2_chr10_-_121356007_121356147	0.100032	AAUACUG	ENST00000369093.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1 	ENST00000436547.2|TIAL1|ENSG00000151923.13|TIA1 cytotoxic granule-associated RNA binding protein-like 1
hg19_v2_chr4_+_25235597_25235692	0.100005	AAUACUG	ENST00000264864.6|PI4K2B|ENSG00000038210.9|phosphatidylinositol 4-kinase type 2 beta
hg19_v2_chr12_+_19592602_19592648	0.0999507	AAUACUG	ENST00000398864.3|AEBP2|ENSG00000139154.10|AE binding protein 2 	ENST00000266508.9|AEBP2|ENSG00000139154.10|AE binding protein 2
hg19_v2_chr16_-_56459354_56459471	0.0981831	AAUACUG	ENST00000290649.5|AMFR|ENSG00000159461.10|autocrine motility factor receptor, E3 ubiquitin protein ligase
hg19_v2_chrX_+_109246285_109246352	0.0975551	AAUACUG	ENST00000372073.1|TMEM164|ENSG00000157600.7|transmembrane protein 164 	ENST00000372068.2|TMEM164|ENSG00000157600.7|transmembrane protein 164 	ENST00000288381.4|TMEM164|ENSG00000157600.7|transmembrane protein 164
hg19_v2_chr3_+_67048721_67048760	0.0958388	AAUACUG	ENST00000295568.4|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8 	ENST00000484414.1|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8 	ENST00000460576.1|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8 	ENST00000417314.2|KBTBD8|ENSG00000163376.7|kelch repeat and BTB (POZ) domain containing 8
hg19_v2_chr2_-_131850951_131851065	0.0955234	AAUACUG	ENST00000409185.1|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B 	ENST00000389915.3|FAM168B|ENSG00000152102.13|family with sequence similarity 168, member B
hg19_v2_chr12_+_112856690_112856731	0.0954657	AAUACUG	ENST00000392597.1|PTPN11|ENSG00000179295.11|protein tyrosine phosphatase, non-receptor type 11 	ENST00000351677.2|PTPN11|ENSG00000179295.11|protein tyrosine phosphatase, non-receptor type 11
hg19_v2_chr16_-_80838195_80838228	0.0954422	AAUACUG	ENST00000570137.2|CDYL2|ENSG00000166446.10|chromodomain protein, Y-like 2
hg19_v2_chr19_+_9945962_9946023	0.094987	AAUACUG	ENST00000587625.1|PIN1|ENSG00000127445.9|peptidylprolyl cis/trans isomerase, NIMA-interacting 1 	ENST00000247970.4|PIN1|ENSG00000127445.9|peptidylprolyl cis/trans isomerase, NIMA-interacting 1 	ENST00000588695.1|PIN1|ENSG00000127445.9|peptidylprolyl cis/trans isomerase, NIMA-interacting 1
hg19_v2_chr16_+_86544113_86544145	0.094579	AAUACUG	ENST00000262426.4|FOXF1|ENSG00000103241.5|forkhead box F1
hg19_v2_chrX_-_41782249_41782287	0.0880063	AAUACUG	ENST00000442742.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000421587.2|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000378166.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000318588.9|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family) 	ENST00000361962.4|CASK|ENSG00000147044.16|calcium/calmodulin-dependent serine protein kinase (MAGUK family)
hg19_v2_chr10_-_105218645_105218645	0.0868532	AAUACUG	ENST00000329905.5|CALHM1|ENSG00000185933.6|calcium homeostasis modulator 1
hg19_v2_chr11_+_111473108_111473226	0.0864832	AAUACUG	ENST00000304987.3|SIK2|ENSG00000170145.4|salt-inducible kinase 2
hg19_v2_chr5_+_179921430_179921461	0.0864325	AAUACUG	ENST00000393356.1|CNOT6|ENSG00000113300.7|CCR4-NOT transcription complex, subunit 6
hg19_v2_chr15_+_83478370_83478426	0.0840654	AAUACUG	ENST00000286760.4|WHAMM|ENSG00000156232.6|WAS protein homolog associated with actin, golgi membranes and microtubules
hg19_v2_chr12_+_99038998_99039078	0.0822668	AAUACUG	ENST00000359972.2|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000357310.1|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000339433.3|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1 	ENST00000333991.1|APAF1|ENSG00000120868.9|apoptotic peptidase activating factor 1
hg19_v2_chr6_-_17987694_17987913	0.0812929	AAUACUG	ENST00000378814.5|KIF13A|ENSG00000137177.14|kinesin family member 13A 	ENST00000378843.2|KIF13A|ENSG00000137177.14|kinesin family member 13A 	ENST00000378826.2|KIF13A|ENSG00000137177.14|kinesin family member 13A 	ENST00000378816.5|KIF13A|ENSG00000137177.14|kinesin family member 13A 	ENST00000259711.6|KIF13A|ENSG00000137177.14|kinesin family member 13A 	ENST00000502704.1|KIF13A|ENSG00000137177.14|kinesin family member 13A
hg19_v2_chr5_-_49737184_49737239	0.0810071	AAUACUG	ENST00000508934.1|EMB|ENSG00000170571.7|embigin 	ENST00000303221.5|EMB|ENSG00000170571.7|embigin
hg19_v2_chr11_+_33278811_33279133	0.0804199	AAUACUG	ENST00000303296.4|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3 	ENST00000379016.3|HIPK3|ENSG00000110422.7|homeodomain interacting protein kinase 3
hg19_v2_chr16_-_15736953_15737025	0.0800697	AAUACUG	ENST00000548025.1|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000551742.1|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000602337.1|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000344181.3|KIAA0430|ENSG00000166783.15|KIAA0430 	ENST00000396368.3|KIAA0430|ENSG00000166783.15|KIAA0430
hg19_v2_chr18_+_18943554_18943587	0.077841	AAUACUG	ENST00000580732.2|GREB1L|ENSG00000141449.10|growth regulation by estrogen in breast cancer-like
hg19_v2_chr1_-_10532531_10532594	0.0769662	AAUACUG	ENST00000377036.2|DFFA|ENSG00000160049.7|DNA fragmentation factor, 45kDa, alpha polypeptide 	ENST00000377038.3|DFFA|ENSG00000160049.7|DNA fragmentation factor, 45kDa, alpha polypeptide
hg19_v2_chrX_-_124097620_124097666	0.0762212	AAUACUG	ENST00000371130.3|TENM1|ENSG00000009694.9|teneurin transmembrane protein 1 	ENST00000422452.2|TENM1|ENSG00000009694.9|teneurin transmembrane protein 1
hg19_v2_chr5_-_44388899_44388918	0.0737341	AAUACUG	ENST00000264664.4|FGF10|ENSG00000070193.4|fibroblast growth factor 10
hg19_v2_chr3_-_49449350_49449464	0.0733871	AAUACUG	ENST00000454011.2|RHOA|ENSG00000067560.6|ras homolog family member A 	ENST00000445425.1|RHOA|ENSG00000067560.6|ras homolog family member A 	ENST00000422781.1|RHOA|ENSG00000067560.6|ras homolog family member A
hg19_v2_chr12_+_53774423_53774658	0.0733623	AAUACUG	ENST00000426431.2|SP1|ENSG00000185591.5|Sp1 transcription factor
hg19_v2_chr14_+_29234870_29235050	0.0729065	AAUACUG	ENST00000382535.3|FOXG1|ENSG00000176165.7|forkhead box G1
hg19_v2_chr3_-_24536253_24536328	0.0726128	AAUACUG	ENST00000428492.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000396671.2|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000431815.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000418247.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000416420.1|THRB|ENSG00000151090.13|thyroid hormone receptor, beta 	ENST00000356447.4|THRB|ENSG00000151090.13|thyroid hormone receptor, beta
hg19_v2_chr11_-_35440796_35440916	0.0725465	AAUACUG	ENST00000278379.3|SLC1A2|ENSG00000110436.7|solute carrier family 1 (glial high affinity glutamate transporter), member 2
hg19_v2_chr11_+_70116779_70116858	0.0714514	AAUACUG	ENST00000253925.7|PPFIA1|ENSG00000131626.11|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 	ENST00000389547.3|PPFIA1|ENSG00000131626.11|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1
hg19_v2_chr8_+_56014949_56015048	0.0711487	AAUACUG	ENST00000327381.6|XKR4|ENSG00000206579.7|XK, Kell blood group complex subunit-related family, member 4
hg19_v2_chr4_+_184426147_184426237	0.0701421	AAUACUG	ENST00000302327.3|ING2|ENSG00000168556.5|inhibitor of growth family, member 2
hg19_v2_chr9_-_73736511_73736546	0.0693607	AAUACUG	ENST00000377110.3|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3 	ENST00000377111.2|TRPM3|ENSG00000083067.18|transient receptor potential cation channel, subfamily M, member 3
hg19_v2_chr12_-_7079805_7079988	0.0680473	AAUACUG	ENST00000536316.2|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000542912.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000440277.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000545167.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000546111.1|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000399433.2|PHB2|ENSG00000215021.4|prohibitin 2 	ENST00000535923.1|PHB2|ENSG00000215021.4|prohibitin 2
hg19_v2_chr10_-_115904361_115904375	0.0672237	AAUACUG	ENST00000428953.1|C10orf118|ENSG00000165813.12|chromosome 10 open reading frame 118 	ENST00000543782.1|C10orf118|ENSG00000165813.12|chromosome 10 open reading frame 118
hg19_v2_chr2_-_25475120_25475180	0.0665234	AAUACUG	ENST00000380746.4|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha 	ENST00000402667.1|DNMT3A|ENSG00000119772.12|DNA (cytosine-5-)-methyltransferase 3 alpha
hg19_v2_chr3_+_152017181_152017229	0.0664084	AAUACUG	ENST00000498502.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000324196.5|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000545754.1|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1 	ENST00000357472.3|MBNL1|ENSG00000152601.13|muscleblind-like splicing regulator 1
hg19_v2_chr1_+_182808474_182808504	0.0651279	AAUACUG	ENST00000367549.3|DHX9|ENSG00000135829.12|DEAH (Asp-Glu-Ala-His) box helicase 9
hg19_v2_chr14_-_64010046_64010107	0.0645528	AAUACUG	ENST00000337537.3|PPP2R5E|ENSG00000154001.9|protein phosphatase 2, regulatory subunit B', epsilon isoform
hg19_v2_chr2_+_187350883_187350962	0.0635509	AAUACUG	ENST00000337859.6|ZC3H15|ENSG00000065548.13|zinc finger CCCH-type containing 15
hg19_v2_chr1_-_240775447_240775462	0.061203	AAUACUG	ENST00000318160.4|GREM2|ENSG00000180875.4|gremlin 2, DAN family BMP antagonist
hg19_v2_chr22_+_39898325_39898382	0.061087	AAUACUG	ENST00000325301.2|MIEF1|ENSG00000100335.8|mitochondrial elongation factor 1 	ENST00000404569.1|MIEF1|ENSG00000100335.8|mitochondrial elongation factor 1
hg19_v2_chr4_-_100867864_100867889	0.0610327	AAUACUG	ENST00000442697.2|DNAJB14|ENSG00000164031.12|DnaJ (Hsp40) homolog, subfamily B, member 14
hg19_v2_chr4_+_90033968_90033968	0.0607096	AAUACUG	ENST00000317005.2|TIGD2|ENSG00000180346.2|tigger transposable element derived 2
hg19_v2_chr1_-_200379180_200379191	0.0602774	AAUACUG	ENST00000294740.3|ZNF281|ENSG00000162702.7|zinc finger protein 281
hg19_v2_chr3_+_196594727_196594816	0.0583125	AAUACUG	ENST00000445299.2|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5 	ENST00000323460.5|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5 	ENST00000419026.1|SENP5|ENSG00000119231.6|SUMO1/sentrin specific peptidase 5
hg19_v2_chr3_+_180630090_180630311	0.058194	AAUACUG	ENST00000357559.4|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1 	ENST00000305586.7|FXR1|ENSG00000114416.13|fragile X mental retardation, autosomal homolog 1
hg19_v2_chr18_+_63418068_63418157	0.0581845	AAUACUG	ENST00000397968.2|CDH7|ENSG00000081138.9|cadherin 7, type 2
hg19_v2_chr1_+_229406847_229406935	0.0572866	AAUACUG	ENST00000366690.4|RAB4A|ENSG00000168118.7|RAB4A, member RAS oncogene family
hg19_v2_chrX_-_6146876_6146924	0.0572799	AAUACUG	ENST00000381095.3|NLGN4X|ENSG00000146938.10|neuroligin 4, X-linked
hg19_v2_chr4_+_95129061_95129198	0.0552017	AAUACUG	ENST00000354268.4|SMARCAD1|ENSG00000163104.13|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
hg19_v2_chr13_-_79979919_79979945	0.0548206	AAUACUG	ENST00000267229.7|RBM26|ENSG00000139746.11|RNA binding motif protein 26
hg19_v2_chr1_+_193091080_193091222	0.0544099	AAUACUG	ENST00000367435.3|CDC73|ENSG00000134371.9|cell division cycle 73
hg19_v2_chr2_-_203776864_203776949	0.0538779	AAUACUG	ENST00000261015.4|WDR12|ENSG00000138442.5|WD repeat domain 12
hg19_v2_chr15_-_101792137_101792159	0.0536666	AAUACUG	ENST00000254190.3|CHSY1|ENSG00000131873.5|chondroitin sulfate synthase 1
hg19_v2_chr7_+_128379346_128379447	0.0498545	AAUACUG	ENST00000535011.2|CALU|ENSG00000128595.12|calumenin 	ENST00000542996.2|CALU|ENSG00000128595.12|calumenin 	ENST00000535623.1|CALU|ENSG00000128595.12|calumenin 	ENST00000538546.1|CALU|ENSG00000128595.12|calumenin 	ENST00000249364.4|CALU|ENSG00000128595.12|calumenin 	ENST00000449187.2|CALU|ENSG00000128595.12|calumenin
hg19_v2_chr11_-_66115032_66115163	0.0487479	AAUACUG	ENST00000311181.4|B3GNT1|ENSG00000174684.6|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1
hg19_v2_chr8_+_77593448_77593471	0.0485345	AAUACUG	ENST00000521891.2|ZFHX4|ENSG00000091656.11|zinc finger homeobox 4
hg19_v2_chr22_+_48972118_48972153	0.0450594	AAUACUG	ENST00000358295.5|FAM19A5|ENSG00000219438.4|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5
hg19_v2_chr8_-_17104356_17104395	0.0446166	AAUACUG	ENST00000361272.4|CNOT7|ENSG00000198791.7|CCR4-NOT transcription complex, subunit 7 	ENST00000523917.1|CNOT7|ENSG00000198791.7|CCR4-NOT transcription complex, subunit 7
hg19_v2_chr12_+_56862301_56862327	0.0423966	AAUACUG	ENST00000338146.5|SPRYD4|ENSG00000176422.10|SPRY domain containing 4
hg19_v2_chr20_-_48099182_48099214	0.040122	AAUACUG	ENST00000371741.4|KCNB1|ENSG00000158445.7|potassium voltage-gated channel, Shab-related subfamily, member 1
hg19_v2_chr3_+_183853052_183853179	0.0395433	AAUACUG	ENST00000273783.3|EIF2B5|ENSG00000145191.7|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa 	ENST00000432569.1|EIF2B5|ENSG00000145191.7|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa 	ENST00000444495.1|EIF2B5|ENSG00000145191.7|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa
hg19_v2_chr9_-_36400213_36400296	0.0387891	AAUACUG	ENST00000259605.6|RNF38|ENSG00000137075.13|ring finger protein 38 	ENST00000353739.4|RNF38|ENSG00000137075.13|ring finger protein 38
hg19_v2_chr2_+_228029281_228029330	0.0386831	AAUACUG	ENST00000396578.3|COL4A3|ENSG00000169031.14|collagen, type IV, alpha 3 (Goodpasture antigen)
hg19_v2_chr6_-_90062543_90062567	0.0382546	AAUACUG	ENST00000435041.2|UBE2J1|ENSG00000198833.6|ubiquitin-conjugating enzyme E2, J1
hg19_v2_chr2_+_169312350_169312372	0.0376788	AAUACUG	ENST00000305747.6|CERS6|ENSG00000172292.10|ceramide synthase 6
hg19_v2_chr5_-_89825328_89825422	0.0357307	AAUACUG	ENST00000500869.2|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000315948.6|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3 	ENST00000509384.1|LYSMD3|ENSG00000176018.8|LysM, putative peptidoglycan-binding, domain containing 3
hg19_v2_chr4_-_48271802_48271881	0.0330021	AAUACUG	ENST00000381501.3|TEC|ENSG00000135605.8|tec protein tyrosine kinase
hg19_v2_chr2_-_69870835_69870853	0.0319847	AAUACUG	ENST00000409085.4|AAK1|ENSG00000115977.14|AP2 associated kinase 1 	ENST00000406297.3|AAK1|ENSG00000115977.14|AP2 associated kinase 1
hg19_v2_chr17_+_54671047_54671075	0.031682	AAUACUG	ENST00000332822.4|NOG|ENSG00000183691.4|noggin
hg19_v2_chr16_+_50582222_50582241	0.0309301	AAUACUG	ENST00000268459.3|NKD1|ENSG00000140807.4|naked cuticle homolog 1 (Drosophila)
hg19_v2_chr17_-_42580738_42580798	0.0307066	AAUACUG	ENST00000585614.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000591680.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000434000.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000588554.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8 	ENST00000592154.1|GPATCH8|ENSG00000186566.7|G patch domain containing 8
hg19_v2_chr3_+_4535025_4535040	0.0298525	AAUACUG	ENST00000302640.8|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000354582.6|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000423119.2|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000357086.4|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1 	ENST00000456211.2|ITPR1|ENSG00000150995.13|inositol 1,4,5-trisphosphate receptor, type 1
hg19_v2_chr2_+_148778570_148778589	0.0297986	AAUACUG	ENST00000407073.1|MBD5|ENSG00000204406.7|methyl-CpG binding domain protein 5
hg19_v2_chr21_-_39870339_39870443	0.0293892	AAUACUG	ENST00000429727.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398905.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000398907.1|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000453032.2|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog 	ENST00000288319.7|ERG|ENSG00000157554.14|v-ets avian erythroblastosis virus E26 oncogene homolog
hg19_v2_chr17_+_57287228_57287413	0.0274551	AAUACUG	ENST00000578922.1|SMG8|ENSG00000167447.8|SMG8 nonsense mediated mRNA decay factor 	ENST00000300917.5|SMG8|ENSG00000167447.8|SMG8 nonsense mediated mRNA decay factor
hg19_v2_chr14_+_50087468_50087543	0.0270895	AAUACUG	ENST00000305386.2|MGAT2|ENSG00000168282.4|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
hg19_v2_chr17_+_25799008_25799036	0.0261014	AAUACUG	ENST00000583370.1|KSR1|ENSG00000141068.9|kinase suppressor of ras 1 	ENST00000398988.3|KSR1|ENSG00000141068.9|kinase suppressor of ras 1 	ENST00000268763.6|KSR1|ENSG00000141068.9|kinase suppressor of ras 1
hg19_v2_chr14_-_71067360_71067400	0.0255976	AAUACUG	ENST00000554963.1|MED6|ENSG00000133997.7|mediator complex subunit 6 	ENST00000430055.2|MED6|ENSG00000133997.7|mediator complex subunit 6 	ENST00000440435.2|MED6|ENSG00000133997.7|mediator complex subunit 6 	ENST00000256379.5|MED6|ENSG00000133997.7|mediator complex subunit 6
hg19_v2_chr6_-_146135880_146135952	0.0251577	AAUACUG	ENST00000237281.4|FBXO30|ENSG00000118496.4|F-box protein 30
hg19_v2_chr4_-_140477928_140477990	0.0244918	AAUACUG	ENST00000274031.3|SETD7|ENSG00000145391.9|SET domain containing (lysine methyltransferase) 7
hg19_v2_chrX_-_80065146_80065250	0.024421	AAUACUG	ENST00000373275.4|BRWD3|ENSG00000165288.10|bromodomain and WD repeat domain containing 3
hg19_v2_chr16_-_2246436_2246526	0.0240112	AAUACUG	ENST00000343516.6|CASKIN1|ENSG00000167971.14|CASK interacting protein 1
hg19_v2_chr5_-_132948216_132948255	0.0237759	AAUACUG	ENST00000265342.7|FSTL4|ENSG00000053108.12|follistatin-like 4
hg19_v2_chr15_-_44486632_44486664	0.022821	AAUACUG	ENST00000484674.1|FRMD5|ENSG00000171877.15|FERM domain containing 5
hg19_v2_chr17_+_73629500_73629532	0.0214859	AAUACUG	ENST00000375215.3|SMIM5|ENSG00000204323.5|small integral membrane protein 5
hg19_v2_chr3_-_52312636_52312673	0.0212721	AAUACUG	ENST00000296490.3|WDR82|ENSG00000164091.7|WD repeat domain 82
hg19_v2_chrX_+_110339439_110339605	0.0199521	AAUACUG	ENST00000372010.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3 	ENST00000519681.1|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3 	ENST00000372007.5|PAK3|ENSG00000077264.10|p21 protein (Cdc42/Rac)-activated kinase 3
hg19_v2_chr4_-_55991752_55991770	0.0199108	AAUACUG	ENST00000263923.4|KDR|ENSG00000128052.8|kinase insert domain receptor (a type III receptor tyrosine kinase)
hg19_v2_chr2_+_85198216_85198305	0.0189428	AAUACUG	ENST00000456682.1|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1 	ENST00000409785.4|KCMF1|ENSG00000176407.13|potassium channel modulatory factor 1
hg19_v2_chr7_+_108210012_108210012	0.0188761	AAUACUG	ENST00000249356.3|DNAJB9|ENSG00000128590.4|DnaJ (Hsp40) homolog, subfamily B, member 9
hg19_v2_chr13_+_28813645_28813770	0.0175434	AAUACUG	ENST00000282391.5|PAN3|ENSG00000152520.9|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)
hg19_v2_chr1_+_202317815_202317854	0.016284	AAUACUG	ENST00000608999.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000336894.4|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B 	ENST00000480184.1|PPP1R12B|ENSG00000077157.16|protein phosphatase 1, regulatory subunit 12B
hg19_v2_chr12_-_54673871_54673925	0.0137939	AAUACUG	ENST00000209875.4|CBX5|ENSG00000094916.9|chromobox homolog 5
hg19_v2_chr6_-_34360413_34360453	0.0117223	AAUACUG	ENST00000607016.1|NUDT3|ENSG00000272325.1|nudix (nucleoside diphosphate linked moiety X)-type motif 3
hg19_v2_chr2_-_158485387_158485517	0.0113399	AAUACUG	ENST00000243349.8|ACVR1C|ENSG00000123612.11|activin A receptor, type IC
hg19_v2_chr1_+_24882560_24882620	0.0112912	AAUACUG	ENST00000374392.2|NCMAP|ENSG00000184454.6|noncompact myelin associated protein
hg19_v2_chr15_+_80351910_80351955	0.00982267	AAUACUG	ENST00000261749.6|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6 	ENST00000561060.1|ZFAND6|ENSG00000086666.14|zinc finger, AN1-type domain 6
hg19_v2_chr10_-_27443155_27443288	0.00934813	AAUACUG	ENST00000427324.1|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase 	ENST00000326799.3|YME1L1|ENSG00000136758.14|YME1-like 1 ATPase
hg19_v2_chr1_+_32479430_32479597	0.0064107	AAUACUG	ENST00000327300.7|KHDRBS1|ENSG00000121774.13|KH domain containing, RNA binding, signal transduction associated 1 	ENST00000492989.1|KHDRBS1|ENSG00000121774.13|KH domain containing, RNA binding, signal transduction associated 1
hg19_v2_chr8_-_74005349_74005507	0.00573507	AAUACUG	ENST00000297354.6|SBSPON|ENSG00000164764.10|somatomedin B and thrombospondin, type 1 domain containing
hg19_v2_chr11_+_9685604_9685706	0.00572386	AAUACUG	ENST00000447399.2|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit 	ENST00000318950.6|SWAP70|ENSG00000133789.10|SWAP switching B-cell complex 70kDa subunit
hg19_v2_chr21_-_34100244_34100277	0.0048515	AAUACUG	ENST00000382491.3|SYNJ1|ENSG00000159082.13|synaptojanin 1 	ENST00000357345.3|SYNJ1|ENSG00000159082.13|synaptojanin 1 	ENST00000429236.1|SYNJ1|ENSG00000159082.13|synaptojanin 1
hg19_v2_chr9_+_36036430_36036430	0.00396702	AAUACUG	ENST00000377966.3|RECK|ENSG00000122707.7|reversion-inducing-cysteine-rich protein with kazal motifs
hg19_v2_chr4_-_79860506_79860600	0.00390154	AAUACUG	ENST00000295462.3|PAQR3|ENSG00000163291.10|progestin and adipoQ receptor family member III 	ENST00000380645.4|PAQR3|ENSG00000163291.10|progestin and adipoQ receptor family member III 	ENST00000512733.1|PAQR3|ENSG00000163291.10|progestin and adipoQ receptor family member III
hg19_v2_chr6_+_37225540_37225558	0.00339033	AAUACUG	ENST00000373491.3|TBC1D22B|ENSG00000065491.8|TBC1 domain family, member 22B
hg19_v2_chr1_-_115212696_115212732	0.00309716	AAUACUG	ENST00000393276.3|DENND2C|ENSG00000175984.10|DENN/MADD domain containing 2C 	ENST00000393277.1|DENND2C|ENSG00000175984.10|DENN/MADD domain containing 2C
hg19_v2_chr9_-_86323118_86323164	0.00267468	AAUACUG	ENST00000376395.4|UBQLN1|ENSG00000135018.9|ubiquilin 1
hg19_v2_chr1_+_33005020_33005077	0.0016145	AAUACUG	ENST00000373510.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A 	ENST00000316459.4|ZBTB8A|ENSG00000160062.10|zinc finger and BTB domain containing 8A
