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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G67580

Z-value: 3.12

Transcription factors associated with AT5G67580

Gene Symbol Gene ID Gene Info
AT5G67580
AT5G67580 Homeodomain-like/winged-helix DNA-binding family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
TRB2arTal_v1_Chr5_-_26957725_269577740.591.0e-03Click!

Activity profile of AT5G67580 motif

Sorted Z-values of AT5G67580 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_-_162905 10.80 AT3G01420.1
DOX1
Peroxidase superfamily protein
Chr4_+_15828228 9.97 AT4G32810.1
AT4G32810.2
CCD8
carotenoid cleavage dioxygenase 8
Chr1_-_9131779 9.91 AT1G26390.1
AT1G26390
FAD-binding Berberine family protein
Chr1_-_11668690 9.80 AT1G32350.1
AT1G32350.2
AOX1D
alternative oxidase 1D
Chr2_+_13581534 9.11 AT2G31945.1
AT2G31945
transmembrane protein
Chr4_+_1464467 8.93 AT4G03320.1
Tic20-IV
translocon at the inner envelope membrane of chloroplasts 20-IV
Chr3_+_22216540 8.55 AT3G60140.2
AT3G60140.1
DIN2
Glycosyl hydrolase superfamily protein
Chr5_-_6042938 8.08 AT5G18270.2
AT5G18270.1
ANAC087
NAC domain containing protein 87
Chr3_-_1063103 7.93 AT3G04070.2
AT3G04070.1
NAC047
NAC domain containing protein 47
Chr4_+_2224422 7.89 AT4G04460.2
AT4G04460.1
AT4G04460
Saposin-like aspartyl protease family protein
Chr1_-_1996355 7.82 AT1G06520.1
GPAT1
glycerol-3-phosphate acyltransferase 1
Chr1_-_19698482 7.76 AT1G52890.1
NAC019
NAC domain containing protein 19
Chr4_+_10974456 7.73 AT4G20320.2
AT4G20320.4
AT4G20320.3
AT4G20320.1
AT4G20320.5
AT4G20320.6
AT4G20320
CTP synthase family protein
Chr3_-_2699257 7.62 AT3G08860.2
PYD4
PYRIMIDINE 4
Chr3_-_2699420 7.46 AT3G08860.1
PYD4
PYRIMIDINE 4
Chr2_-_19291632 7.39 AT2G46950.2
AT2G46950.1
CYP709B2
cytochrome P450, family 709, subfamily B, polypeptide 2
Chr3_-_23410360 7.36 AT3G63380.1
AT3G63380
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Chr4_+_11269985 7.20 AT4G21120.1
AT4G21120.2
AAT1
amino acid transporter 1
Chr1_+_5389952 7.11 AT1G15670.1
AT1G15670
Galactose oxidase/kelch repeat superfamily protein
Chr2_-_16014991 6.98 AT2G38240.1
AT2G38240
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr2_+_17251819 6.87 AT2G41380.1
AT2G41380
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_+_22824414 6.80 AT1G61800.2
AT1G61800.1
GPT2
glucose-6-phosphate/phosphate translocator 2
Chr1_-_27755297 6.75 AT1G73810.1
AT1G73810
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Chr1_-_17076417 6.74 AT1G45145.1
TRX5
thioredoxin H-type 5
Chr5_-_9000345 6.73 AT5G25820.1
AT5G25820
Exostosin family protein
Chr4_-_7686873 6.51 AT4G13250.2
AT4G13250.1
NYC1
NAD(P)-binding Rossmann-fold superfamily protein
Chr2_-_18077517 6.47 AT2G43570.1
CHI
chitinase
Chr4_+_18409846 6.46 AT4G39670.1
AT4G39670
Glycolipid transfer protein (GLTP) family protein
Chr4_-_6718550 6.43 AT4G10960.1
UGE5
UDP-D-glucose/UDP-D-galactose 4-epimerase 5
Chr3_+_6089381 6.43 AT3G17790.1
PAP17
purple acid phosphatase 17
Chr1_-_9128568 6.38 AT1G26380.1
AT1G26380
FAD-binding Berberine family protein
Chr5_-_25089603 6.38 AT5G62480.3
AT5G62480.2
AT5G62480.1
GSTU9
glutathione S-transferase tau 9
Chr3_-_23150606 6.33 AT3G62590.1
AT3G62590
alpha/beta-Hydrolases superfamily protein
Chr5_+_1153740 6.23 AT5G04200.1
MC9
metacaspase 9
Chr5_-_26531176 6.11 AT5G66440.1
AT5G66440
tRNA-methyltransferase non-catalytic subunit trm6MTase subunit
Chr1_+_6515373 6.09 AT1G18870.1
AT1G18870.3
ICS2
isochorismate synthase 2
Chr1_-_23019494 6.06 AT1G62300.1
WRKY6
WRKY family transcription factor
Chr5_-_2079005 6.02 AT5G06720.1
PA2
peroxidase 2
Chr1_+_10537648 6.02 AT1G30040.2
GA2OX2
gibberellin 2-oxidase
Chr1_-_28991385 5.97 AT1G77145.2
AT1G77145.1
AT1G77145
transmembrane protein, putative (DUF506)
Chr4_+_131422 5.94 AT4G00305.1
AT4G00305
RING/U-box superfamily protein
Chr3_+_17624340 5.89 AT3G47780.1
ABCA7
ABC2 homolog 6
Chr1_-_28318362 5.82 AT1G75450.1
AT1G75450.2
CKX5
cytokinin oxidase 5
Chr1_+_10537457 5.80 AT1G30040.1
GA2OX2
gibberellin 2-oxidase
Chr5_+_1672070 5.80 AT5G05600.1
AT5G05600.2
AT5G05600
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr4_+_994726 5.79 AT4G02280.1
SUS3
sucrose synthase 3
Chr3_-_19699392 5.75 AT3G53150.1
UGT73D1
UDP-glucosyl transferase 73D1
Chr5_+_5710910 5.68 AT5G17330.1
GAD
glutamate decarboxylase
Chr3_-_84901 5.56 AT3G01270.1
AT3G01270
Pectate lyase family protein
Chr3_+_8575051 5.55 AT3G23790.1
AAE16
AMP-dependent synthetase and ligase family protein
Chr2_-_8447355 5.53 AT2G19500.1
CKX2
cytokinin oxidase 2
Chr1_-_5129523 5.50 AT1G14870.2
PCR2
PLANT CADMIUM RESISTANCE 2
Chr1_+_202103 5.47 AT1G01560.3
AT1G01560.2
AT1G01560.1
AT1G01560.4
MPK11
MAP kinase 11
Chr2_-_10127589 5.46 AT2G23790.1
AT2G23790
calcium uniporter (DUF607)
Chr4_+_11655562 5.42 AT4G21980.1
AT4G21980.2
APG8A
Ubiquitin-like superfamily protein
Chr4_-_17467109 5.37 AT4G37070.1
AT4G37070.4
AT4G37070.3
AT4G37070.2
PLP1
Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
Chr2_-_19330197 5.36 AT2G47040.1
VGD1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr1_-_5129731 5.24 AT1G14870.1
PCR2
PLANT CADMIUM RESISTANCE 2
Chr1_-_10184512 5.24 AT1G29160.1
AT1G29160
Dof-type zinc finger DNA-binding family protein
Chr1_+_6515644 5.20 AT1G18870.2
ICS2
isochorismate synthase 2
Chr2_-_16860779 5.19 AT2G40370.1
LAC5
laccase 5
Chr5_-_9716418 5.18 AT5G27520.1
PNC2
peroxisomal adenine nucleotide carrier 2
Chr1_+_8164959 5.16 AT1G23040.3
AT1G23040.2
AT1G23040
hydroxyproline-rich glycoprotein family protein
Chr5_-_1580875 5.15 AT5G05340.1
PRX52
Peroxidase superfamily protein
Chr1_+_9483157 5.14 AT1G27300.1
AT1G27300
transmembrane protein
Chr5_-_5904380 5.13 AT5G17860.2
CAX7
calcium exchanger 7
Chr5_-_5904532 5.12 AT5G17860.1
CAX7
calcium exchanger 7
Chr1_-_27466348 5.11 AT1G73010.1
PS2
inorganic pyrophosphatase 1
Chr3_+_9685932 5.07 AT3G26470.1
AT3G26470
Powdery mildew resistance protein, RPW8 domain-containing protein
Chr1_-_4740842 5.06 AT1G13830.2
AT1G13830
Carbohydrate-binding X8 domain superfamily protein
Chr1_-_17706460 5.03 AT1G48000.1
MYB112
myb domain protein 112
Chr4_-_11971203 5.02 AT4G22780.1
ACR7
ACT domain repeat 7
Chr3_+_7541384 5.02 AT3G21420.1
LBO1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr4_-_11971357 4.99 AT4G22780.2
ACR7
ACT domain repeat 7
Chr1_-_28767517 4.97 AT1G76650.2
CML38
calmodulin-like 38
Chr5_+_25679425 4.96 AT5G64190.2
AT5G64190.1
AT5G64190
neuronal PAS domain protein
Chr1_-_3323735 4.86 AT1G10140.1
AT1G10140
Uncharacterized conserved protein UCP031279
Chr1_-_28767712 4.84 AT1G76650.1
CML38
calmodulin-like 38
Chr1_+_8164782 4.82 AT1G23040.1
AT1G23040
hydroxyproline-rich glycoprotein family protein
Chr1_-_4741189 4.74 AT1G13830.1
AT1G13830
Carbohydrate-binding X8 domain superfamily protein
Chr1_+_28655208 4.69 AT1G76390.2
AT1G76390.1
PUB43
ARM repeat superfamily protein
Chr3_-_11400332 4.69 AT3G29590.1
AT5MAT
HXXXD-type acyl-transferase family protein
Chr4_+_15230008 4.66 AT4G31380.1
FLP1
flowering-promoting factor-like protein
Chr4_+_2238370 4.65 AT4G04500.2
AT4G04500.3
AT4G04500.1
CRK37
cysteine-rich RLK (RECEPTOR-like protein kinase) 37
Chr5_+_16431304 4.62 AT5G41040.1
AT5G41040.2
RWP1
HXXXD-type acyl-transferase family protein
Chr4_-_11585391 4.62 AT4G21830.2
MSRB7
methionine sulfoxide reductase B7
Chr1_-_167842 4.62 AT1G01453.2
AT1G01453
late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
Chr5_+_4268532 4.62 AT5G13320.3
PBS3
Auxin-responsive GH3 family protein
Chr1_-_28768138 4.60 AT1G76650.3
CML38
calmodulin-like 38
Chr5_+_1602205 4.60 AT5G05410.2
AT5G05410.1
DREB2A
DRE-binding protein 2A
Chr1_-_659980 4.59 AT1G02920.1
GSTF7
glutathione S-transferase 7
Chr2_-_19326484 4.59 AT2G47030.1
VGDH1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr5_+_20090648 4.58 AT5G49520.1
WRKY48
WRKY DNA-binding protein 48
Chr5_+_4268316 4.56 AT5G13320.2
PBS3
Auxin-responsive GH3 family protein
Chr1_-_5645443 4.54 AT1G16510.1
AT1G16510
SAUR-like auxin-responsive protein family
Chr3_+_9541483 4.53 AT3G26110.1
AT3G26110
Anther-specific protein agp1-like protein
Chr2_+_15834766 4.53 AT2G37770.2
AT2G37770.1
ChlAKR
NAD(P)-linked oxidoreductase superfamily protein
Chr3_-_3311327 4.52 AT3G10590.1
AT3G10590
Duplicated homeodomain-like superfamily protein
Chr5_-_1508927 4.50 AT5G05110.1
AT5G05110
Cystatin/monellin family protein
Chr2_+_10826735 4.50 AT2G25440.1
RLP20
receptor like protein 20
Chr5_+_24320595 4.44 AT5G60470.1
AT5G60470.3
AT5G60470
C2H2 and C2HC zinc fingers superfamily protein
Chr4_-_11585542 4.41 AT4G21830.1
MSRB7
methionine sulfoxide reductase B7
Chr3_-_22945288 4.39 AT3G61960.2
AT3G61960.1
AT3G61960
Protein kinase superfamily protein
Chr3_-_9595283 4.38 AT3G26210.1
CYP71B23
cytochrome P450, family 71, subfamily B, polypeptide 23
Chr5_+_16801707 4.37 AT5G42010.2
AT5G42010.1
AT5G42010
Transducin/WD40 repeat-like superfamily protein
Chr4_-_11694564 4.36 AT4G22070.3
AT4G22070.4
AT4G22070.1
AT4G22070.2
WRKY31
WRKY DNA-binding protein 31
Chr3_-_3386533 4.36 AT3G10815.1
AT3G10815
RING/U-box superfamily protein
Chr5_+_4267456 4.31 AT5G13320.1
PBS3
Auxin-responsive GH3 family protein
Chr1_-_2282828 4.28 AT1G07430.1
HAI2
highly ABA-induced PP2C protein 2
Chr1_-_168088 4.26 AT1G01453.1
AT1G01453
late embryogenesis abundant hydroxyproline-rich glycoprotein family protein
Chr1_-_17817406 4.26 AT1G48260.1
AT1G48260.2
AT1G48260.5
AT1G48260.4
CIPK17
CBL-interacting protein kinase 17
Chr5_+_8749680 4.25 AT5G25250.1
FLOT1
SPFH/Band 7/PHB domain-containing membrane-associated protein family
Chr1_-_11719988 4.23 AT1G32450.1
NRT1.5
nitrate transporter 1.5
Chr2_+_12767585 4.22 AT2G29950.1
ELF4-L1
ELF4-like 1
Chr3_-_9898006 4.22 AT3G26850.2
AT3G26850.1
AT3G26850
histone-lysine N-methyltransferase
Chr4_+_14894073 4.11 AT4G30470.1
AT4G30470
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_+_6622055 4.10 AT1G19180.3
AT1G19180.2
JAZ1
jasmonate-zim-domain protein 1
Chr1_-_4026733 4.10 AT1G11925.1
AT1G11925
Stigma-specific Stig1 family protein
Chr5_+_15634444 4.09 AT5G39050.1
PMAT1
HXXXD-type acyl-transferase family protein
Chr3_+_16383595 4.08 AT3G44880.1
ACD1
Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein
Chr5_+_25908247 4.08 AT5G64810.1
WRKY51
WRKY DNA-binding protein 51
Chr1_-_7265445 4.06 AT1G20880.3
AT1G20880.1
AT1G20880.2
AT1G20880
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr4_-_16562931 4.05 AT4G34710.2
AT4G34710.1
ADC2
arginine decarboxylase 2
Chr3_+_390720 4.04 AT3G02150.1
AT3G02150.2
PTF1
plastid transcription factor 1
Chr4_+_10875233 4.04 AT4G20110.2
AT4G20110.1
VSR7
VACUOLAR SORTING RECEPTOR 7
Chr1_+_23527570 4.03 AT1G63440.1
HMA5
heavy metal atpase 5
Chr1_+_10244453 4.03 AT1G29290.1
AT1G29290
B-cell lymphoma 6 protein
Chr5_-_3368082 4.01 AT5G10650.2
AT5G10650
RING/U-box superfamily protein
Chr2_-_16466941 3.99 AT2G39435.2
AT2G39435.3
AT2G39435.6
AT2G39435.5
AT2G39435.1
TRM18
Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein
Chr2_-_14051400 3.99 AT2G33150.1
PKT3
peroxisomal 3-ketoacyl-CoA thiolase 3
Chr5_-_18189523 3.99 AT5G45070.1
PP2-A8
phloem protein 2-A8
Chr1_+_27389948 3.98 AT1G72770.2
AT1G72770.1
AT1G72770.4
AT1G72770.5
AT1G72770.3
HAB1
HYPERSENSITIVE TO ABA1
Chr2_-_7256831 3.98 AT2G16720.1
MYB7
myb domain protein 7
Chr5_-_3368264 3.98 AT5G10650.3
AT5G10650
RING/U-box superfamily protein
Chr4_-_14820595 3.98 AT4G30270.1
XTH24
xyloglucan endotransglucosylase/hydrolase 24
Chr2_+_6758430 3.98 AT2G15480.1
UGT73B5
UDP-glucosyl transferase 73B5
Chr2_+_19136019 3.98 AT2G46600.1
AT2G46600
Calcium-binding EF-hand family protein
Chr5_+_26705785 3.97 AT5G66870.1
ASL1
ASYMMETRIC LEAVES 2-like 1
Chr2_-_476650 3.97 AT2G02010.1
GAD4
glutamate decarboxylase 4
Chr1_+_6621777 3.97 AT1G19180.1
JAZ1
jasmonate-zim-domain protein 1
Chr1_-_5272058 3.97 AT1G15310.1
ATHSRP54A
signal recognition particle 54 kDa subunit
Chr1_+_25865471 3.96 AT1G68820.1
AT1G68820.3
AT1G68820.2
AT1G68820
Transmembrane Fragile-X-F-associated protein
Chr5_-_3368439 3.95 AT5G10650.1
AT5G10650
RING/U-box superfamily protein
Chr3_+_21656484 3.94 AT3G58570.1
AT3G58570
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr2_-_19089229 3.92 AT2G46500.2
AT2G46500.1
PI4K GAMMA 4
phosphoinositide 4-kinase gamma 4
Chr4_+_5792137 3.90 AT4G09030.1
AGP10
arabinogalactan protein 10
Chr1_+_24342483 3.88 AT1G65483.1
AT1G65483
hypothetical protein
Chr3_-_9464676 3.86 AT3G25870.1
AT3G25870
hypothetical protein
Chr3_-_6815403 3.84 AT3G19615.1
AT3G19615
beta-1,4-xylosidase
Chr2_-_476997 3.84 AT2G02010.2
GAD4
glutamate decarboxylase 4
Chr3_+_15207367 3.79 AT3G43230.1
AT3G43230
RING/FYVE/PHD-type zinc finger family protein
Chr2_-_19089027 3.79 AT2G46500.3
PI4K GAMMA 4
phosphoinositide 4-kinase gamma 4
Chr3_+_6536534 3.76 AT3G18950.1
AT3G18950
Transducin/WD40 repeat-like superfamily protein
Chr2_-_10835483 3.75 AT2G25460.1
AT2G25460
EEIG1/EHBP1 protein amino-terminal domain protein
Chr2_-_15092353 3.74 AT2G35940.3
AT2G35940.1
BLH1
BEL1-like homeodomain 1
Chr2_-_15092178 3.74 AT2G35940.2
BLH1
BEL1-like homeodomain 1
Chr1_-_11423684 3.74 AT1G31835.1
AT1G31835.2
AT1G31835
hypothetical protein
Chr3_-_11384145 3.74 AT3G29575.1
AT3G29575.4
AT3G29575.3
AFP3
ABI five binding protein 3
Chr1_-_20784017 3.72 AT1G55610.2
AT1G55610.1
BRL1
BRI1 like
Chr5_+_26725839 3.72 AT5G66930.3
AT5G66930.2
AT5G66930.1
AT5G66930
meiotically up-regulated protein
Chr4_-_14776058 3.70 AT4G30190.2
HA2
H[+]-ATPase 2
Chr2_-_1379130 3.70 AT2G04100.1
AT2G04100.2
AT2G04100
MATE efflux family protein
Chr4_-_14776247 3.70 AT4G30190.1
HA2
H[+]-ATPase 2
Chr2_+_18624264 3.68 AT2G45170.1
AT2G45170.2
ATG8E
AUTOPHAGY 8E
Chr5_-_22972690 3.68 AT5G56795.1
MT1B
metallothionein 1B
Chr2_-_10672892 3.67 AT2G25090.1
CIPK16
CBL-interacting protein kinase 16
Chr4_+_10838310 3.67 AT4G20000.1
AT4G20000
VQ motif-containing protein
Chr2_+_13658888 3.65 AT2G32150.1
AT2G32150.2
AT2G32150.3
AT2G32150
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_-_2747992 3.63 AT5G08490.3
AT5G08490.5
AT5G08490.4
AT5G08490.1
AT5G08490.2
AT5G08490.7
AT5G08490.8
AT5G08490.6
SLG1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_6958509 3.62 AT3G19970.1
AT3G19970.2
AT3G19970.3
AT3G19970.5
AT3G19970.4
AT3G19970
alpha/beta-Hydrolases superfamily protein
Chr1_-_20420400 3.62 AT1G54710.2
ATG18H
autophagy 18h-like protein
Chr3_+_6926189 3.62 AT3G19910.1
AT3G19910.2
AT3G19910
RING/U-box superfamily protein
Chr3_+_19624278 3.60 AT3G52920.1
AT3G52920.2
AT3G52920
transcriptional activator (DUF662)
Chr5_+_24320411 3.59 AT5G60470.2
AT5G60470
C2H2 and C2HC zinc fingers superfamily protein
Chr1_-_20421156 3.58 AT1G54710.1
ATG18H
autophagy 18h-like protein
Chr2_-_10835660 3.58 AT2G25460.2
AT2G25460
EEIG1/EHBP1 protein amino-terminal domain protein
Chr5_+_24774980 3.56 AT5G61640.2
AT5G61640.1
PMSR1
peptidemethionine sulfoxide reductase 1
Chr2_+_12094621 3.55 AT2G28320.1
AT2G28320
Pleckstrin homology (PH) and lipid-binding START domains-containing protein
Chr4_+_16857353 3.55 AT4G35500.2
AT4G35500
Protein kinase superfamily protein
Chr2_-_17569669 3.53 AT2G42140.1
AT2G42140
VQ motif-containing protein
Chr3_+_458741 3.53 AT3G02290.5
AT3G02290.6
AT3G02290
RING/U-box superfamily protein
Chr4_+_7866328 3.52 AT4G13530.1
AT4G13530
transmembrane protein
Chr3_+_458412 3.52 AT3G02290.3
AT3G02290.4
AT3G02290
RING/U-box superfamily protein
Chr3_+_20244284 3.50 AT3G54680.1
AT3G54680
proteophosphoglycan-like protein
Chr3_+_19723350 3.48 AT3G53230.1
AtCDC48B
ATPase, AAA-type, CDC48 protein
Chr1_-_17816548 3.46 AT1G48260.3
CIPK17
CBL-interacting protein kinase 17
Chr4_+_7866784 3.46 AT4G13530.2
AT4G13530
transmembrane protein
Chr1_-_16917053 3.46 AT1G44800.1
SIAR1
nodulin MtN21 /EamA-like transporter family protein
Chr4_-_9749000 3.44 AT4G17483.5
AT4G17483.4
AT4G17483.3
AT4G17483.2
AT4G17483.1
AT4G17483
alpha/beta-Hydrolases superfamily protein
Chr5_+_16281394 3.42 AT5G40650.1
AT5G40650.2
SDH2-2
succinate dehydrogenase 2-2
Chr4_-_17206033 3.42 AT4G36430.1
AT4G36430
Peroxidase superfamily protein
Chr2_+_4743162 3.41 AT2G11810.1
AT2G11810.3
MGDC
monogalactosyldiacylglycerol synthase type C
Chr1_-_27569823 3.40 AT1G73330.1
DR4
drought-repressed 4
Chr5_-_6578508 3.39 AT5G19490.1
AT5G19490
Histone superfamily protein
Chr5_-_18747406 3.37 AT5G46240.1
KAT1
1
Chr5_+_23967217 3.36 AT5G59430.2
AT5G59430.4
AT5G59430.3
TRP1
telomeric repeat binding protein 1
Chr1_-_23226983 3.35 AT1G62710.1
BETA-VPE
beta vacuolar processing enzyme
Chr4_-_10714745 3.35 AT4G19700.1
RING
SBP (S-ribonuclease binding protein) family protein
Chr1_-_26058105 3.35 AT1G69310.4
AT1G69310.3
WRKY57
WRKY DNA-binding protein 57
Chr1_+_22198266 3.34 AT1G60190.1
PUB19
ARM repeat superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G67580

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
4.5 13.5 GO:0016046 detection of fungus(GO:0016046)
3.7 15.0 GO:1901334 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
2.7 10.8 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
2.7 8.1 GO:0010446 response to alkaline pH(GO:0010446)
2.6 7.9 GO:0045764 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
2.4 7.2 GO:0015802 basic amino acid transport(GO:0015802)
2.3 9.2 GO:0097438 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
2.3 6.8 GO:0015717 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
2.0 6.1 GO:1903513 retrograde protein transport, ER to cytosol(GO:0030970) endoplasmic reticulum to cytosol transport(GO:1903513)
2.0 6.0 GO:0002215 defense response to nematode(GO:0002215)
1.9 11.4 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
1.8 7.3 GO:0010272 response to silver ion(GO:0010272)
1.6 4.7 GO:0061014 positive regulation of mRNA catabolic process(GO:0061014)
1.5 3.1 GO:1902066 regulation of cell wall pectin metabolic process(GO:1902066)
1.5 6.1 GO:0080029 cellular response to boron-containing substance levels(GO:0080029)
1.5 7.5 GO:0010201 response to continuous far red light stimulus by the high-irradiance response system(GO:0010201)
1.5 7.5 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
1.4 4.2 GO:0006369 termination of RNA polymerase II transcription(GO:0006369)
1.4 7.0 GO:0000972 transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000972)
1.4 5.5 GO:0070509 calcium ion import(GO:0070509)
1.4 4.1 GO:0090213 regulation of radial pattern formation(GO:0090213)
1.3 4.0 GO:0010124 phenylacetate catabolic process(GO:0010124)
1.3 5.2 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
1.3 11.4 GO:0010230 alternative respiration(GO:0010230)
1.3 3.8 GO:0030030 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
1.2 9.8 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
1.2 3.6 GO:0009945 radial axis specification(GO:0009945)
1.1 4.5 GO:0010324 membrane invagination(GO:0010324)
1.1 3.3 GO:1904580 regulation of intracellular mRNA localization(GO:1904580)
1.1 3.2 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
1.1 7.4 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
1.0 13.5 GO:0042374 phylloquinone biosynthetic process(GO:0042372) phylloquinone metabolic process(GO:0042374)
1.0 5.2 GO:0048577 negative regulation of short-day photoperiodism, flowering(GO:0048577)
1.0 4.1 GO:0006527 arginine catabolic process(GO:0006527)
1.0 2.9 GO:0002188 translation reinitiation(GO:0002188)
0.9 3.7 GO:0000256 allantoin catabolic process(GO:0000256)
0.9 10.2 GO:0000304 response to singlet oxygen(GO:0000304)
0.9 2.7 GO:0034551 respiratory chain complex III assembly(GO:0017062) mitochondrial respiratory chain complex III assembly(GO:0034551) mitochondrial respiratory chain complex III biogenesis(GO:0097033)
0.9 14.3 GO:0019375 galactolipid biosynthetic process(GO:0019375)
0.9 4.4 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.9 0.9 GO:0046209 nitric oxide metabolic process(GO:0046209)
0.9 7.7 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.9 15.3 GO:0009065 glutamine family amino acid catabolic process(GO:0009065)
0.8 7.4 GO:0010188 response to microbial phytotoxin(GO:0010188)
0.8 5.8 GO:0032957 inositol trisphosphate metabolic process(GO:0032957)
0.8 3.2 GO:0030643 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.8 4.0 GO:1900384 regulation of flavonol biosynthetic process(GO:1900384)
0.8 2.4 GO:2000693 positive regulation of seed maturation(GO:2000693)
0.8 3.1 GO:0070827 cellular component maintenance(GO:0043954) chromatin maintenance(GO:0070827)
0.8 2.3 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.8 2.3 GO:0048833 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.8 3.0 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.7 2.2 GO:0010269 response to selenium ion(GO:0010269)
0.7 2.2 GO:0090548 response to nitrate starvation(GO:0090548)
0.7 2.2 GO:0000349 generation of catalytic spliceosome for first transesterification step(GO:0000349)
0.7 2.2 GO:0031087 nuclear-transcribed mRNA catabolic process, deadenylation-independent decay(GO:0031086) deadenylation-independent decapping of nuclear-transcribed mRNA(GO:0031087)
0.7 4.3 GO:0043409 negative regulation of MAP kinase activity(GO:0043407) negative regulation of MAPK cascade(GO:0043409)
0.7 0.7 GO:0032491 detection of molecule of fungal origin(GO:0032491)
0.7 2.1 GO:0071763 nuclear membrane organization(GO:0071763)
0.7 2.8 GO:0035305 negative regulation of dephosphorylation(GO:0035305) negative regulation of protein dephosphorylation(GO:0035308)
0.7 4.9 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.7 4.8 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.7 10.3 GO:0043248 proteasome assembly(GO:0043248)
0.7 0.7 GO:0015744 thiosulfate transport(GO:0015709) succinate transport(GO:0015744) succinate transmembrane transport(GO:0071422)
0.7 2.7 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.7 5.4 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.7 4.0 GO:0010273 detoxification of copper ion(GO:0010273) stress response to copper ion(GO:1990169)
0.7 8.5 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.6 2.5 GO:0016320 endoplasmic reticulum membrane fusion(GO:0016320)
0.6 5.1 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.6 5.7 GO:0080144 amino acid homeostasis(GO:0080144)
0.6 2.5 GO:0045332 phospholipid translocation(GO:0045332)
0.6 3.1 GO:0016444 somatic cell DNA recombination(GO:0016444)
0.6 26.9 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.6 1.8 GO:0045948 positive regulation of translational initiation(GO:0045948)
0.6 1.8 GO:0098532 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.6 1.2 GO:0035864 response to potassium ion(GO:0035864) cellular response to potassium ion(GO:0035865)
0.6 2.3 GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043162)
0.6 2.3 GO:0050792 regulation of viral process(GO:0050792)
0.6 2.2 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.6 3.4 GO:0006624 vacuolar protein processing(GO:0006624)
0.5 2.7 GO:0015074 DNA integration(GO:0015074)
0.5 3.2 GO:0043617 cellular response to sucrose starvation(GO:0043617)
0.5 4.8 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.5 0.5 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.5 1.5 GO:0006430 lysyl-tRNA aminoacylation(GO:0006430)
0.5 9.5 GO:0010555 response to mannitol(GO:0010555)
0.5 0.5 GO:0000393 spliceosomal conformational changes to generate catalytic conformation(GO:0000393)
0.5 2.5 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.5 0.5 GO:1903321 negative regulation of protein modification by small protein conjugation or removal(GO:1903321)
0.5 1.5 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.5 2.5 GO:0080009 mRNA methylation(GO:0080009)
0.5 4.4 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.5 2.4 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.5 4.8 GO:0016574 histone ubiquitination(GO:0016574)
0.5 2.4 GO:0030322 stabilization of membrane potential(GO:0030322)
0.5 1.4 GO:0045717 negative regulation of fatty acid biosynthetic process(GO:0045717)
0.5 4.2 GO:0000478 endonucleolytic cleavage involved in rRNA processing(GO:0000478)
0.5 1.4 GO:1901522 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.5 0.5 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.5 1.4 GO:0033967 box C/D snoRNA 3'-end processing(GO:0000494) peptidyl-glutamine methylation(GO:0018364) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258)
0.5 1.8 GO:0045911 positive regulation of DNA recombination(GO:0045911)
0.5 3.2 GO:0045898 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898) positive regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045899)
0.5 1.8 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.5 2.3 GO:0070125 mitochondrial translational elongation(GO:0070125)
0.4 4.0 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.4 4.8 GO:0052547 negative regulation of peptidase activity(GO:0010466) regulation of peptidase activity(GO:0052547)
0.4 1.8 GO:0031929 TOR signaling(GO:0031929)
0.4 1.3 GO:0009264 deoxyribonucleotide catabolic process(GO:0009264)
0.4 10.9 GO:0046854 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.4 1.7 GO:1902751 positive regulation of G2/M transition of mitotic cell cycle(GO:0010971) positive regulation of cell cycle G2/M phase transition(GO:1902751)
0.4 13.0 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.4 1.3 GO:0010447 response to acidic pH(GO:0010447)
0.4 11.1 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.4 3.3 GO:0045903 positive regulation of translational fidelity(GO:0045903)
0.4 1.3 GO:1901984 negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.4 1.7 GO:1900370 positive regulation of RNA interference(GO:1900370)
0.4 2.1 GO:0010271 regulation of chlorophyll catabolic process(GO:0010271) regulation of tetrapyrrole catabolic process(GO:1901404)
0.4 3.7 GO:0000731 DNA synthesis involved in DNA repair(GO:0000731)
0.4 7.8 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.4 3.3 GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c(GO:0006122)
0.4 2.9 GO:0080187 floral organ senescence(GO:0080187)
0.4 2.0 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.4 4.1 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.4 1.6 GO:0022615 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.4 2.8 GO:0000338 protein deneddylation(GO:0000338)
0.4 0.4 GO:0002832 negative regulation of response to biotic stimulus(GO:0002832) negative regulation of response to external stimulus(GO:0032102)
0.4 1.2 GO:0033615 mitochondrial proton-transporting ATP synthase complex assembly(GO:0033615)
0.4 1.2 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.4 3.2 GO:0034724 DNA replication-independent nucleosome organization(GO:0034724)
0.4 1.6 GO:0006559 L-phenylalanine catabolic process(GO:0006559) erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process(GO:1902222)
0.4 0.8 GO:1990573 potassium ion import across plasma membrane(GO:1990573)
0.4 3.4 GO:0006121 mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.4 2.6 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.4 1.1 GO:0015783 GDP-fucose transport(GO:0015783) UDP-glucose transport(GO:0015786)
0.4 5.3 GO:0031053 primary miRNA processing(GO:0031053)
0.4 3.0 GO:0010117 photoprotection(GO:0010117)
0.4 1.8 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.4 6.6 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.4 5.1 GO:0051262 protein tetramerization(GO:0051262)
0.4 2.5 GO:0006598 polyamine catabolic process(GO:0006598)
0.4 5.1 GO:0048766 root hair initiation(GO:0048766)
0.4 3.6 GO:0009954 proximal/distal pattern formation(GO:0009954)
0.4 3.2 GO:0006882 cellular zinc ion homeostasis(GO:0006882)
0.4 8.6 GO:0046219 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.4 1.1 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.4 2.2 GO:1900036 positive regulation of cellular response to heat(GO:1900036)
0.4 1.4 GO:0001120 DNA-templated transcriptional open complex formation(GO:0001112) transcriptional open complex formation at RNA polymerase II promoter(GO:0001113) protein-DNA complex remodeling(GO:0001120) macromolecular complex remodeling(GO:0034367)
0.4 1.4 GO:0051445 regulation of meiotic nuclear division(GO:0040020) regulation of meiotic cell cycle(GO:0051445)
0.4 1.4 GO:0015697 quaternary ammonium group transport(GO:0015697)
0.4 2.1 GO:0016926 protein desumoylation(GO:0016926)
0.4 10.2 GO:0032784 regulation of DNA-templated transcription, elongation(GO:0032784)
0.3 1.4 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.3 2.1 GO:0090202 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
0.3 2.1 GO:0072344 rescue of stalled ribosome(GO:0072344)
0.3 2.1 GO:0006379 mRNA cleavage(GO:0006379)
0.3 4.4 GO:0006621 protein retention in ER lumen(GO:0006621)
0.3 2.0 GO:0006567 threonine catabolic process(GO:0006567)
0.3 1.0 GO:0045604 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.3 1.0 GO:0007019 microtubule depolymerization(GO:0007019)
0.3 2.0 GO:0048863 stem cell differentiation(GO:0048863)
0.3 1.6 GO:2000576 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.3 1.9 GO:0043270 positive regulation of ion transport(GO:0043270)
0.3 2.5 GO:0044804 nucleophagy(GO:0044804)
0.3 1.9 GO:1901001 negative regulation of response to salt stress(GO:1901001)
0.3 0.9 GO:0006368 transcription elongation from RNA polymerase II promoter(GO:0006368)
0.3 1.9 GO:0048530 fruit morphogenesis(GO:0048530)
0.3 1.2 GO:0009304 tRNA transcription(GO:0009304)
0.3 2.5 GO:0016233 telomere capping(GO:0016233)
0.3 5.2 GO:0052325 cell wall pectin biosynthetic process(GO:0052325)
0.3 4.0 GO:0006616 SRP-dependent cotranslational protein targeting to membrane, translocation(GO:0006616)
0.3 7.9 GO:0006914 autophagy(GO:0006914)
0.3 2.7 GO:0009410 response to xenobiotic stimulus(GO:0009410)
0.3 2.1 GO:0051569 regulation of histone H3-K4 methylation(GO:0051569)
0.3 7.3 GO:1900424 regulation of defense response to bacterium(GO:1900424)
0.3 1.1 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.3 1.4 GO:0071108 protein K48-linked deubiquitination(GO:0071108)
0.3 1.1 GO:0070828 heterochromatin organization(GO:0070828)
0.3 1.7 GO:0043476 pigmentation(GO:0043473) pigment accumulation(GO:0043476) pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.3 1.7 GO:2000105 positive regulation of DNA endoreduplication(GO:0032877) positive regulation of DNA-dependent DNA replication(GO:2000105)
0.3 2.0 GO:2000779 regulation of double-strand break repair(GO:2000779)
0.3 2.2 GO:0070131 regulation of mitochondrial translation(GO:0070129) positive regulation of mitochondrial translation(GO:0070131)
0.3 1.4 GO:0045740 positive regulation of DNA replication(GO:0045740)
0.3 1.9 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.3 3.6 GO:0010540 basipetal auxin transport(GO:0010540)
0.3 9.6 GO:0006333 chromatin assembly or disassembly(GO:0006333)
0.3 1.1 GO:0019336 phenol-containing compound catabolic process(GO:0019336)
0.3 2.5 GO:0018210 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.3 1.1 GO:0043433 negative regulation of sequence-specific DNA binding transcription factor activity(GO:0043433)
0.3 0.8 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.3 1.1 GO:0035435 phosphate ion transmembrane transport(GO:0035435)
0.3 1.1 GO:0006361 transcription initiation from RNA polymerase I promoter(GO:0006361)
0.3 0.8 GO:1904031 positive regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045737) positive regulation of cyclin-dependent protein kinase activity(GO:1904031)
0.3 5.8 GO:0045787 positive regulation of cell cycle(GO:0045787)
0.3 2.4 GO:0002697 regulation of immune effector process(GO:0002697) regulation of defense response to virus(GO:0050688)
0.3 1.8 GO:2001022 positive regulation of response to DNA damage stimulus(GO:2001022)
0.3 1.0 GO:0002184 cytoplasmic translational termination(GO:0002184)
0.3 0.8 GO:0006513 protein monoubiquitination(GO:0006513)
0.3 3.8 GO:0045910 regulation of DNA recombination(GO:0000018) negative regulation of DNA recombination(GO:0045910)
0.3 7.9 GO:0006012 galactose metabolic process(GO:0006012)
0.3 8.4 GO:0045292 mRNA cis splicing, via spliceosome(GO:0045292)
0.2 1.5 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.2 1.0 GO:0042256 mature ribosome assembly(GO:0042256)
0.2 7.5 GO:0000470 maturation of LSU-rRNA(GO:0000470)
0.2 1.9 GO:0071450 response to superoxide(GO:0000303) response to oxygen radical(GO:0000305) removal of superoxide radicals(GO:0019430) cellular response to oxygen radical(GO:0071450) cellular response to superoxide(GO:0071451)
0.2 7.0 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.2 1.4 GO:1990019 protein storage vacuole organization(GO:1990019)
0.2 8.1 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.2 1.7 GO:0016558 protein import into peroxisome matrix(GO:0016558)
0.2 2.4 GO:0002183 cytoplasmic translational initiation(GO:0002183)
0.2 0.7 GO:0043982 histone H4-K8 acetylation(GO:0043982)
0.2 0.7 GO:0080182 histone H3-K4 trimethylation(GO:0080182)
0.2 0.9 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.2 4.2 GO:0051788 response to misfolded protein(GO:0051788)
0.2 28.2 GO:0000398 mRNA splicing, via spliceosome(GO:0000398)
0.2 4.8 GO:0006754 ATP biosynthetic process(GO:0006754) energy coupled proton transport, down electrochemical gradient(GO:0015985) ATP synthesis coupled proton transport(GO:0015986)
0.2 2.5 GO:0048317 seed morphogenesis(GO:0048317)
0.2 0.7 GO:0033869 purine nucleotide catabolic process(GO:0006195) purine ribonucleotide catabolic process(GO:0009154) ribonucleotide catabolic process(GO:0009261) coenzyme A catabolic process(GO:0015938) nucleoside bisphosphate catabolic process(GO:0033869) ribonucleoside bisphosphate catabolic process(GO:0034031) purine nucleoside bisphosphate catabolic process(GO:0034034)
0.2 2.0 GO:0051177 meiotic sister chromatid segregation(GO:0045144) meiotic sister chromatid cohesion(GO:0051177)
0.2 0.4 GO:0000255 allantoin metabolic process(GO:0000255)
0.2 1.5 GO:0060149 negative regulation of posttranscriptional gene silencing(GO:0060149)
0.2 1.1 GO:0051452 vacuolar acidification(GO:0007035) intracellular pH reduction(GO:0051452)
0.2 5.3 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.2 0.7 GO:0034052 positive regulation of plant-type hypersensitive response(GO:0034052)
0.2 0.7 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.2 2.4 GO:0042775 mitochondrial ATP synthesis coupled electron transport(GO:0042775)
0.2 3.3 GO:0006465 signal peptide processing(GO:0006465)
0.2 14.5 GO:0016579 protein deubiquitination(GO:0016579)
0.2 2.6 GO:0007064 mitotic sister chromatid cohesion(GO:0007064)
0.2 3.0 GO:0046688 response to copper ion(GO:0046688)
0.2 1.1 GO:0006446 regulation of translational initiation(GO:0006446)
0.2 1.3 GO:0045824 negative regulation of innate immune response(GO:0045824)
0.2 0.9 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.2 2.1 GO:0017182 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.2 1.5 GO:0048572 short-day photoperiodism(GO:0048572) short-day photoperiodism, flowering(GO:0048575)
0.2 4.4 GO:0043666 regulation of phosphoprotein phosphatase activity(GO:0043666)
0.2 1.0 GO:0006787 porphyrin-containing compound catabolic process(GO:0006787) tetrapyrrole catabolic process(GO:0033015)
0.2 3.9 GO:0015937 coenzyme A biosynthetic process(GO:0015937)
0.2 3.6 GO:0006814 sodium ion transport(GO:0006814)
0.2 3.4 GO:0006406 mRNA export from nucleus(GO:0006406) mRNA transport(GO:0051028) mRNA-containing ribonucleoprotein complex export from nucleus(GO:0071427)
0.2 0.8 GO:0006481 C-terminal protein methylation(GO:0006481) C-terminal protein amino acid modification(GO:0018410) post-translational protein modification(GO:0043687)
0.2 1.2 GO:0031118 rRNA pseudouridine synthesis(GO:0031118)
0.2 3.4 GO:0046352 disaccharide catabolic process(GO:0046352)
0.2 0.4 GO:0001736 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.2 4.4 GO:0010104 regulation of ethylene-activated signaling pathway(GO:0010104) regulation of phosphorelay signal transduction system(GO:0070297)
0.2 1.6 GO:0010222 stem vascular tissue pattern formation(GO:0010222)
0.2 6.9 GO:0044744 protein import into nucleus(GO:0006606) protein targeting to nucleus(GO:0044744)
0.2 1.8 GO:0033683 nucleotide-excision repair, DNA incision(GO:0033683)
0.2 4.5 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.2 5.2 GO:0006935 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)
0.2 2.7 GO:0019471 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.2 1.3 GO:0090356 negative regulation of auxin metabolic process(GO:0090356)
0.2 10.4 GO:1902600 hydrogen ion transmembrane transport(GO:1902600)
0.2 9.7 GO:0009631 cold acclimation(GO:0009631)
0.2 0.4 GO:0051703 pollen tube reception(GO:0010483) intraspecies interaction between organisms(GO:0051703)
0.2 3.3 GO:0080156 mitochondrial mRNA modification(GO:0080156)
0.2 3.3 GO:0051017 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.2 1.8 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.2 1.3 GO:0016925 protein sumoylation(GO:0016925)
0.2 1.1 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.2 0.7 GO:0016598 protein arginylation(GO:0016598)
0.2 4.5 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.2 2.9 GO:0050821 protein stabilization(GO:0050821)
0.2 1.4 GO:0051596 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.2 2.4 GO:0042273 ribosomal large subunit biogenesis(GO:0042273)
0.2 1.9 GO:0060968 regulation of gene silencing(GO:0060968)
0.2 0.7 GO:0046786 viral replication complex formation and maintenance(GO:0046786)
0.2 6.6 GO:0030041 actin filament polymerization(GO:0030041)
0.2 4.0 GO:0090630 activation of GTPase activity(GO:0090630)
0.2 3.5 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.2 0.5 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.2 1.8 GO:0031539 positive regulation of anthocyanin metabolic process(GO:0031539)
0.2 3.8 GO:0007031 peroxisome organization(GO:0007031)
0.2 1.6 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.2 0.5 GO:2000082 regulation of L-ascorbic acid biosynthetic process(GO:2000082)
0.2 0.6 GO:0035964 COPI-coated vesicle budding(GO:0035964) Golgi vesicle budding(GO:0048194) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.2 0.6 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.2 0.6 GO:1902914 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.2 2.4 GO:0031167 rRNA methylation(GO:0031167)
0.2 0.5 GO:0070207 protein homotrimerization(GO:0070207)
0.2 1.3 GO:0030162 regulation of proteolysis(GO:0030162)
0.2 0.8 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.2 2.0 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.2 0.3 GO:0043570 maintenance of DNA repeat elements(GO:0043570)
0.2 2.0 GO:0015865 purine nucleotide transport(GO:0015865)
0.2 2.0 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.2 2.8 GO:0007602 phototransduction(GO:0007602) red, far-red light phototransduction(GO:0009585)
0.2 0.9 GO:0000055 ribosomal large subunit export from nucleus(GO:0000055)
0.2 0.6 GO:2001057 reactive nitrogen species metabolic process(GO:2001057)
0.1 1.2 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.1 29.6 GO:0071456 cellular response to hypoxia(GO:0071456)
0.1 1.0 GO:1902074 response to salt(GO:1902074)
0.1 1.2 GO:0043928 exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay(GO:0043928)
0.1 0.6 GO:0000012 single strand break repair(GO:0000012)
0.1 3.2 GO:0010167 response to nitrate(GO:0010167)
0.1 6.1 GO:0006338 chromatin remodeling(GO:0006338)
0.1 10.6 GO:0000209 protein polyubiquitination(GO:0000209)
0.1 0.4 GO:0006177 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.1 0.4 GO:0010288 response to lead ion(GO:0010288)
0.1 1.3 GO:0046217 toxin biosynthetic process(GO:0009403) indole phytoalexin biosynthetic process(GO:0009700) indole phytoalexin metabolic process(GO:0046217) phytoalexin metabolic process(GO:0052314) phytoalexin biosynthetic process(GO:0052315)
0.1 4.1 GO:0016575 histone deacetylation(GO:0016575)
0.1 0.5 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.1 3.0 GO:0007030 Golgi organization(GO:0007030)
0.1 0.7 GO:0006285 base-excision repair, AP site formation(GO:0006285)
0.1 0.4 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.1 3.5 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.1 0.8 GO:1990641 response to iron ion starvation(GO:1990641)
0.1 4.2 GO:0009910 negative regulation of flower development(GO:0009910)
0.1 0.5 GO:0009720 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.1 0.8 GO:0032456 endocytic recycling(GO:0032456)
0.1 5.2 GO:0090487 toxin metabolic process(GO:0009404) toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.1 1.5 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.1 0.2 GO:0018195 peptidyl-arginine modification(GO:0018195)
0.1 1.0 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.1 0.9 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.1 1.3 GO:0051814 movement in host(GO:0044000) multi-organism transport(GO:0044766) transport of virus in multicellular host(GO:0046739) transport of virus(GO:0046794) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192) multi-organism localization(GO:1902579)
0.1 0.5 GO:0071963 establishment or maintenance of cell polarity regulating cell shape(GO:0071963) regulation of establishment or maintenance of cell polarity regulating cell shape(GO:2000769)
0.1 1.2 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.1 4.2 GO:0051085 'de novo' posttranslational protein folding(GO:0051084) chaperone mediated protein folding requiring cofactor(GO:0051085)
0.1 0.5 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.1 1.9 GO:0009292 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.1 0.3 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.1 4.7 GO:0034599 cellular response to oxidative stress(GO:0034599)
0.1 0.4 GO:0048656 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.1 0.8 GO:0051050 positive regulation of transport(GO:0051050)
0.1 0.8 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.1 9.9 GO:0010200 response to chitin(GO:0010200)
0.1 0.9 GO:0042026 protein refolding(GO:0042026)
0.1 11.5 GO:0007568 aging(GO:0007568)
0.1 0.4 GO:0006571 tyrosine biosynthetic process(GO:0006571)
0.1 1.2 GO:0043087 regulation of GTPase activity(GO:0043087)
0.1 0.7 GO:0045732 positive regulation of protein catabolic process(GO:0045732)
0.1 0.3 GO:0015692 lead ion transport(GO:0015692)
0.1 3.0 GO:0006367 transcription initiation from RNA polymerase II promoter(GO:0006367)
0.1 2.5 GO:0018393 internal protein amino acid acetylation(GO:0006475) histone acetylation(GO:0016573) internal peptidyl-lysine acetylation(GO:0018393) peptidyl-lysine acetylation(GO:0018394)
0.1 2.9 GO:0006730 one-carbon metabolic process(GO:0006730)
0.1 0.7 GO:0007050 cell cycle arrest(GO:0007050)
0.1 1.3 GO:0010030 positive regulation of seed germination(GO:0010030)
0.1 0.4 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.1 1.2 GO:0051260 protein homooligomerization(GO:0051260)
0.1 2.5 GO:0002239 response to oomycetes(GO:0002239)
0.1 1.6 GO:0030968 endoplasmic reticulum unfolded protein response(GO:0030968)
0.1 1.7 GO:0006890 retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.1 0.8 GO:0010262 somatic embryogenesis(GO:0010262)
0.1 1.4 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.1 0.3 GO:0055047 generative cell mitosis(GO:0055047)
0.1 8.7 GO:0010228 vegetative to reproductive phase transition of meristem(GO:0010228)
0.1 0.9 GO:0080113 regulation of seed growth(GO:0080113)
0.1 0.4 GO:1901006 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.1 1.2 GO:0046470 phosphatidylcholine metabolic process(GO:0046470)
0.1 2.6 GO:0006413 translational initiation(GO:0006413)
0.1 1.0 GO:0060321 acceptance of pollen(GO:0060321)
0.1 0.7 GO:0043171 peptide catabolic process(GO:0043171)
0.1 33.4 GO:0016567 protein ubiquitination(GO:0016567)
0.1 3.4 GO:0009124 nucleoside monophosphate biosynthetic process(GO:0009124)
0.1 0.6 GO:0010044 response to aluminum ion(GO:0010044)
0.1 6.4 GO:0018209 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.1 0.2 GO:0080186 developmental vegetative growth(GO:0080186)
0.1 0.7 GO:0080086 stamen filament development(GO:0080086)
0.1 0.2 GO:0006424 glutamyl-tRNA aminoacylation(GO:0006424) glutaminyl-tRNA aminoacylation(GO:0006425)
0.1 1.2 GO:0006904 vesicle docking involved in exocytosis(GO:0006904)
0.1 1.2 GO:0035265 organ growth(GO:0035265)
0.1 1.4 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.1 1.8 GO:0045489 pectin biosynthetic process(GO:0045489)
0.1 0.5 GO:0002758 pattern recognition receptor signaling pathway(GO:0002221) immune response-activating signal transduction(GO:0002757) innate immune response-activating signal transduction(GO:0002758)
0.1 0.1 GO:0048464 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.1 0.6 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.1 0.8 GO:0036503 ER-associated ubiquitin-dependent protein catabolic process(GO:0030433) ERAD pathway(GO:0036503)
0.1 1.4 GO:0016485 protein processing(GO:0016485)
0.1 0.3 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.1 0.9 GO:0018230 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.1 0.1 GO:1901562 response to paraquat(GO:1901562)
0.1 1.5 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.1 0.8 GO:0010193 response to ozone(GO:0010193)
0.1 7.0 GO:0006470 protein dephosphorylation(GO:0006470)
0.1 0.2 GO:0015739 sialic acid transport(GO:0015739)
0.1 3.9 GO:0010498 proteasomal protein catabolic process(GO:0010498) proteasome-mediated ubiquitin-dependent protein catabolic process(GO:0043161)
0.0 1.5 GO:0006626 protein targeting to mitochondrion(GO:0006626)
0.0 1.0 GO:0006414 translational elongation(GO:0006414)
0.0 1.7 GO:0009694 jasmonic acid metabolic process(GO:0009694)
0.0 1.3 GO:0006099 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)
0.0 3.1 GO:0006869 lipid transport(GO:0006869)
0.0 0.4 GO:0006862 nucleotide transport(GO:0006862)
0.0 0.6 GO:0009958 positive gravitropism(GO:0009958)
0.0 0.2 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.0 0.3 GO:0009684 indoleacetic acid metabolic process(GO:0009683) indoleacetic acid biosynthetic process(GO:0009684)
0.0 1.3 GO:0006511 ubiquitin-dependent protein catabolic process(GO:0006511)
0.0 0.5 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 0.4 GO:0042274 ribosomal small subunit biogenesis(GO:0042274)
0.0 0.8 GO:0010286 heat acclimation(GO:0010286)
0.0 0.9 GO:0006887 exocytosis(GO:0006887)
0.0 0.1 GO:0009557 antipodal cell differentiation(GO:0009557)
0.0 0.1 GO:0071244 cellular response to carbon dioxide(GO:0071244)
0.0 0.3 GO:0001522 pseudouridine synthesis(GO:0001522)
0.0 0.7 GO:0006888 ER to Golgi vesicle-mediated transport(GO:0006888)
0.0 0.1 GO:0015846 polyamine transport(GO:0015846)
0.0 0.1 GO:0009920 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920)
0.0 0.4 GO:0048193 Golgi vesicle transport(GO:0048193)
0.0 0.1 GO:0048462 carpel formation(GO:0048462)
0.0 2.9 GO:0006508 proteolysis(GO:0006508)
0.0 0.1 GO:0000729 meiotic DNA double-strand break processing(GO:0000706) DNA double-strand break processing(GO:0000729)
0.0 1.5 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.2 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.0 0.4 GO:0006383 transcription from RNA polymerase III promoter(GO:0006383)
0.0 0.1 GO:0010205 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.0 0.9 GO:0009624 response to nematode(GO:0009624)
0.0 0.3 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.1 GO:0033314 mitotic DNA replication checkpoint(GO:0033314)
0.0 0.3 GO:0031163 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.0 0.2 GO:0034976 response to endoplasmic reticulum stress(GO:0034976)
0.0 0.1 GO:0097298 regulation of nucleus size(GO:0097298)
0.0 0.3 GO:0010224 response to UV-B(GO:0010224)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.8 5.5 GO:0034702 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
1.5 9.1 GO:0005776 autophagosome(GO:0005776)
1.0 3.1 GO:0034457 Mpp10 complex(GO:0034457)
1.0 6.1 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.9 2.8 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.9 2.8 GO:0035101 FACT complex(GO:0035101)
0.9 3.7 GO:0043625 delta DNA polymerase complex(GO:0043625)
0.8 11.2 GO:0008541 proteasome regulatory particle, lid subcomplex(GO:0008541)
0.8 2.3 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.8 2.3 GO:0070847 core mediator complex(GO:0070847)
0.8 7.5 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.7 6.0 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.7 2.6 GO:0035032 phosphatidylinositol 3-kinase complex(GO:0005942) phosphatidylinositol 3-kinase complex, class III, type I(GO:0034271) phosphatidylinositol 3-kinase complex, class III, type II(GO:0034272) phosphatidylinositol 3-kinase complex, class III(GO:0035032)
0.6 5.2 GO:0070390 transcription export complex 2(GO:0070390)
0.6 1.9 GO:0030874 nucleolar chromatin(GO:0030874)
0.6 6.8 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.6 3.5 GO:0035145 exon-exon junction complex(GO:0035145)
0.6 22.5 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
0.6 9.0 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.6 2.2 GO:0034719 SMN-Sm protein complex(GO:0034719)
0.5 10.3 GO:0031965 nuclear membrane(GO:0031965)
0.5 3.2 GO:0005947 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947) mitochondrial tricarboxylic acid cycle enzyme complex(GO:0030062)
0.5 6.0 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.5 3.4 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.5 21.6 GO:0016592 mediator complex(GO:0016592)
0.5 2.4 GO:0034657 GID complex(GO:0034657)
0.5 3.3 GO:0071012 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.5 0.9 GO:0005687 U4 snRNP(GO:0005687)
0.5 0.9 GO:0022624 proteasome regulatory particle(GO:0005838) proteasome accessory complex(GO:0022624)
0.5 3.6 GO:0005682 U5 snRNP(GO:0005682)
0.5 8.2 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.4 4.0 GO:0017119 Golgi transport complex(GO:0017119)
0.4 0.4 GO:0097525 spliceosomal snRNP complex(GO:0097525)
0.4 0.9 GO:0000974 Prp19 complex(GO:0000974)
0.4 10.5 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.4 5.9 GO:0000124 SAGA complex(GO:0000124)
0.4 1.7 GO:0032044 DSIF complex(GO:0032044)
0.4 4.6 GO:0008180 COP9 signalosome(GO:0008180)
0.4 5.7 GO:0046540 U4/U6 x U5 tri-snRNP complex(GO:0046540)
0.4 2.4 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.4 4.4 GO:0008278 cohesin complex(GO:0008278)
0.4 3.9 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.4 4.6 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786)
0.4 5.3 GO:0008023 transcription elongation factor complex(GO:0008023)
0.4 1.9 GO:0030141 secretory granule(GO:0030141)
0.4 3.4 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.4 4.5 GO:0045257 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)(GO:0005749) succinate dehydrogenase complex (ubiquinone)(GO:0045257) fumarate reductase complex(GO:0045283)
0.4 1.8 GO:0043036 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.4 4.8 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.4 1.8 GO:0005845 mRNA cap binding complex(GO:0005845)
0.4 2.9 GO:0030688 preribosome, small subunit precursor(GO:0030688)
0.4 2.5 GO:0098554 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.3 1.4 GO:0000782 telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783)
0.3 2.8 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.3 2.7 GO:0044463 cell projection part(GO:0044463)
0.3 7.8 GO:0035097 histone methyltransferase complex(GO:0035097)
0.3 1.6 GO:0030286 dynein complex(GO:0030286)
0.3 0.6 GO:0044545 NSL complex(GO:0044545)
0.3 1.3 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.3 1.2 GO:0043614 multi-eIF complex(GO:0043614)
0.3 1.8 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.3 2.3 GO:0098562 cytoplasmic side of plasma membrane(GO:0009898) cytoplasmic side of membrane(GO:0098562)
0.3 0.9 GO:0015030 Cajal body(GO:0015030)
0.3 3.4 GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)(GO:0045261)
0.3 2.8 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.3 1.4 GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276)
0.3 1.1 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.3 4.3 GO:0000786 nucleosome(GO:0000786)
0.3 2.6 GO:0005844 polysome(GO:0005844)
0.3 0.8 GO:0032301 MutSalpha complex(GO:0032301)
0.3 1.0 GO:0018444 translation release factor complex(GO:0018444)
0.3 7.9 GO:0032040 small-subunit processome(GO:0032040)
0.3 1.3 GO:0000418 DNA-directed RNA polymerase IV complex(GO:0000418)
0.2 18.1 GO:0090406 pollen tube(GO:0090406)
0.2 3.7 GO:0005779 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.2 2.4 GO:0005685 U1 snRNP(GO:0005685)
0.2 5.0 GO:0005778 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.2 3.8 GO:0009986 cell surface(GO:0009986)
0.2 1.2 GO:0042721 mitochondrial inner membrane protein insertion complex(GO:0042721)
0.2 3.0 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.2 2.1 GO:0010445 nuclear dicing body(GO:0010445)
0.2 2.0 GO:0000813 ESCRT I complex(GO:0000813)
0.2 2.5 GO:0005663 DNA replication factor C complex(GO:0005663)
0.2 2.4 GO:1902562 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.2 0.4 GO:0031234 extrinsic component of cytoplasmic side of plasma membrane(GO:0031234)
0.2 1.7 GO:0016514 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.2 3.7 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.2 1.1 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.2 1.3 GO:0031082 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.2 0.8 GO:0005853 eukaryotic translation elongation factor 1 complex(GO:0005853)
0.2 0.6 GO:0031414 N-terminal protein acetyltransferase complex(GO:0031414) NatC complex(GO:0031417)
0.2 14.7 GO:0005635 nuclear envelope(GO:0005635)
0.2 3.0 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.2 2.2 GO:0005769 early endosome(GO:0005769)
0.2 1.0 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.2 1.0 GO:0035061 interchromatin granule(GO:0035061)
0.2 6.3 GO:0005798 Golgi-associated vesicle(GO:0005798)
0.2 1.4 GO:0005850 eukaryotic translation initiation factor 2 complex(GO:0005850)
0.2 4.0 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.2 3.0 GO:0000784 nuclear chromosome, telomeric region(GO:0000784)
0.2 16.6 GO:0005681 spliceosomal complex(GO:0005681)
0.2 0.9 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.2 0.9 GO:0030906 retromer, cargo-selective complex(GO:0030906)
0.2 1.7 GO:0072546 ER membrane protein complex(GO:0072546)
0.2 17.1 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.2 28.3 GO:0000785 chromatin(GO:0000785)
0.2 1.4 GO:0000346 transcription export complex(GO:0000346) THO complex part of transcription export complex(GO:0000445)
0.2 0.8 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.2 4.0 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.2 3.9 GO:0005852 eukaryotic translation initiation factor 3 complex(GO:0005852)
0.2 1.1 GO:0005787 signal peptidase complex(GO:0005787)
0.2 0.3 GO:0030686 90S preribosome(GO:0030686)
0.1 1.0 GO:0000439 core TFIIH complex(GO:0000439)
0.1 9.8 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.1 1.0 GO:0030014 CCR4-NOT complex(GO:0030014)
0.1 1.1 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.1 1.0 GO:0033180 proton-transporting V-type ATPase, V1 domain(GO:0033180)
0.1 0.8 GO:0071818 BAT3 complex(GO:0071818)
0.1 2.6 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.1 3.1 GO:0098590 plasma membrane region(GO:0098590)
0.1 1.6 GO:0019774 proteasome core complex, beta-subunit complex(GO:0019774)
0.1 2.0 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.1 1.2 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 35.5 GO:0005730 nucleolus(GO:0005730)
0.1 7.4 GO:0009527 plastid outer membrane(GO:0009527)
0.1 1.8 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.1 3.5 GO:0016607 nuclear speck(GO:0016607)
0.1 1.4 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.1 2.9 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.1 5.1 GO:0005747 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.1 1.5 GO:1902495 transmembrane transporter complex(GO:1902495)
0.1 1.3 GO:0030136 clathrin-coated vesicle(GO:0030136)
0.1 0.6 GO:0031372 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.1 2.7 GO:0009504 cell plate(GO:0009504)
0.1 8.1 GO:0018995 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.1 0.2 GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain(GO:0033178)
0.1 0.7 GO:0030118 clathrin coat(GO:0030118) clathrin adaptor complex(GO:0030131)
0.1 0.4 GO:0030904 retromer complex(GO:0030904)
0.1 1.2 GO:0005839 proteasome core complex(GO:0005839) proteasome core complex, alpha-subunit complex(GO:0019773)
0.1 12.0 GO:0000151 ubiquitin ligase complex(GO:0000151)
0.1 0.4 GO:0000408 EKC/KEOPS complex(GO:0000408)
0.1 0.6 GO:0031209 SCAR complex(GO:0031209)
0.1 2.2 GO:0000137 Golgi cis cisterna(GO:0000137)
0.1 1.6 GO:0000145 exocyst(GO:0000145)
0.1 0.2 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.1 1.2 GO:0032592 integral component of mitochondrial membrane(GO:0032592)
0.0 0.1 GO:1990752 microtubule plus-end(GO:0035371) microtubule end(GO:1990752)
0.0 0.6 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 18.7 GO:0005774 vacuolar membrane(GO:0005774)
0.0 0.5 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.3 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 0.5 GO:0030176 integral component of endoplasmic reticulum membrane(GO:0030176)
0.0 1.3 GO:0015629 actin cytoskeleton(GO:0015629)
0.0 131.9 GO:0005634 nucleus(GO:0005634)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
4.5 13.5 GO:0052626 4-aminobenzoate amino acid synthetase activity(GO:0052625) benzoate amino acid synthetase activity(GO:0052626) vanillate amino acid synthetase activity(GO:0052627) 4-hydroxybenzoate amino acid synthetase activity(GO:0052628)
4.5 13.5 GO:0008909 isochorismate synthase activity(GO:0008909)
2.9 8.8 GO:0050736 O-malonyltransferase activity(GO:0050736)
2.6 7.9 GO:0019776 Atg8 ligase activity(GO:0019776)
2.6 10.2 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
2.5 9.8 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
2.3 6.8 GO:0015119 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
1.8 5.5 GO:0015292 uniporter activity(GO:0015292)
1.8 18.1 GO:0008113 peptide-methionine (S)-S-oxide reductase activity(GO:0008113)
1.7 8.6 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
1.6 11.4 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
1.6 4.8 GO:0004140 dephospho-CoA kinase activity(GO:0004140)
1.4 4.3 GO:0016504 peptidase activator activity(GO:0016504)
1.4 5.7 GO:0046481 digalactosyldiacylglycerol synthase activity(GO:0046481)
1.4 11.4 GO:0009916 alternative oxidase activity(GO:0009916)
1.4 15.1 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
1.4 10.8 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
1.3 12.5 GO:0004351 glutamate decarboxylase activity(GO:0004351)
1.2 4.6 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
1.1 4.5 GO:0070401 NADP+ binding(GO:0070401)
1.1 10.0 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
1.1 3.3 GO:0047326 inositol-1,4,5-trisphosphate 6-kinase activity(GO:0000823) inositol tetrakisphosphate 3-kinase activity(GO:0000824) inositol-1,4,5-trisphosphate 3-kinase activity(GO:0008440) inositol tetrakisphosphate 5-kinase activity(GO:0047326)
1.1 4.2 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
1.0 6.2 GO:0005313 L-glutamate transmembrane transporter activity(GO:0005313) arginine transmembrane transporter activity(GO:0015181) L-lysine transmembrane transporter activity(GO:0015189)
1.0 3.1 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
1.0 3.0 GO:0016041 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
1.0 4.9 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
1.0 7.8 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.9 5.5 GO:0030527 structural constituent of chromatin(GO:0030527)
0.9 2.7 GO:0000386 second spliceosomal transesterification activity(GO:0000386)
0.8 6.7 GO:0004715 non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.8 4.1 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.8 2.4 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.8 11.9 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
0.8 2.4 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.8 1.5 GO:0051766 inositol trisphosphate kinase activity(GO:0051766) inositol-1,3,4-trisphosphate 6-kinase activity(GO:0052725)
0.7 3.7 GO:0030942 endoplasmic reticulum signal peptide binding(GO:0030942)
0.7 2.9 GO:0008251 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.7 2.9 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.7 4.3 GO:0030544 Hsp70 protein binding(GO:0030544)
0.7 5.0 GO:0008022 protein C-terminus binding(GO:0008022)
0.7 2.8 GO:0070034 telomerase RNA binding(GO:0070034)
0.7 2.8 GO:0004445 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
0.7 2.1 GO:0005078 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.7 8.9 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.7 7.3 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.7 2.0 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.6 3.2 GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity(GO:0003863)
0.6 3.2 GO:0004793 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.6 1.9 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.6 6.9 GO:0034647 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.6 1.9 GO:0036402 proteasome-activating ATPase activity(GO:0036402)
0.6 9.3 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.6 1.8 GO:0004046 aminoacylase activity(GO:0004046)
0.6 4.3 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.6 10.0 GO:0030515 snoRNA binding(GO:0030515)
0.6 2.8 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.6 2.8 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.6 1.7 GO:0015146 pentose transmembrane transporter activity(GO:0015146)
0.5 21.9 GO:0004707 MAP kinase activity(GO:0004707)
0.5 2.7 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.5 2.6 GO:0032452 histone demethylase activity(GO:0032452) histone demethylase activity (H3-K9 specific)(GO:0032454)
0.5 4.2 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.5 11.1 GO:0031491 nucleosome binding(GO:0031491)
0.5 3.0 GO:0030619 U1 snRNA binding(GO:0030619)
0.5 1.5 GO:0004824 lysine-tRNA ligase activity(GO:0004824)
0.5 7.5 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.5 3.4 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.5 1.5 GO:0070678 preprotein binding(GO:0070678)
0.5 2.9 GO:0017070 U6 snRNA binding(GO:0017070)
0.5 1.9 GO:0070405 ammonium ion binding(GO:0070405)
0.5 1.4 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.5 3.3 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.5 2.4 GO:0022840 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.5 2.8 GO:0018488 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.5 1.9 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.5 1.8 GO:1901982 disaccharide binding(GO:0048030) maltose binding(GO:1901982)
0.5 1.8 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.4 4.0 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.4 1.3 GO:0008311 phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311)
0.4 1.7 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.4 1.7 GO:1990269 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.4 2.1 GO:0070137 ubiquitin-like protein-specific endopeptidase activity(GO:0070137) SUMO-specific endopeptidase activity(GO:0070139)
0.4 5.8 GO:0016157 sucrose synthase activity(GO:0016157)
0.4 6.9 GO:0015217 ADP transmembrane transporter activity(GO:0015217)
0.4 1.6 GO:0000268 peroxisome targeting sequence binding(GO:0000268)
0.4 1.6 GO:0016034 maleylacetoacetate isomerase activity(GO:0016034)
0.4 6.2 GO:0019903 protein phosphatase binding(GO:0019903)
0.4 3.5 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.4 0.8 GO:0030332 cyclin binding(GO:0030332)
0.4 3.4 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.4 1.5 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.4 5.6 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.4 5.8 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.4 3.6 GO:0090079 translation regulator activity, nucleic acid binding(GO:0090079)
0.4 2.5 GO:0046592 polyamine oxidase activity(GO:0046592)
0.4 3.2 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.4 3.6 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.4 1.4 GO:0052578 alpha-farnesene synthase activity(GO:0052578)
0.4 16.8 GO:0003713 transcription coactivator activity(GO:0003713)
0.4 1.8 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.4 1.4 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.4 6.0 GO:0031369 translation initiation factor binding(GO:0031369)
0.3 4.7 GO:0070122 isopeptidase activity(GO:0070122)
0.3 1.0 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.3 1.0 GO:0008821 crossover junction endodeoxyribonuclease activity(GO:0008821)
0.3 2.3 GO:0048027 mRNA 5'-UTR binding(GO:0048027)
0.3 1.6 GO:0045505 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.3 4.4 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.3 0.9 GO:0005353 fructose transmembrane transporter activity(GO:0005353)
0.3 4.7 GO:0004743 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.3 1.9 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.3 8.3 GO:0031593 polyubiquitin binding(GO:0031593)
0.3 1.5 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.3 2.0 GO:0005254 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.3 2.5 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.3 1.1 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.3 2.0 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.3 1.9 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.3 2.5 GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.3 1.4 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.3 15.0 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.3 1.3 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.3 0.8 GO:0004044 amidophosphoribosyltransferase activity(GO:0004044)
0.3 0.8 GO:0061575 cyclin-dependent protein serine/threonine kinase activator activity(GO:0061575)
0.3 0.8 GO:0015296 anion:cation symporter activity(GO:0015296)
0.3 0.8 GO:0032138 single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.3 1.5 GO:0046972 histone acetyltransferase activity (H4-K8 specific)(GO:0043996) histone acetyltransferase activity (H4-K16 specific)(GO:0046972)
0.2 1.7 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.2 3.9 GO:0051117 ATPase binding(GO:0051117)
0.2 3.9 GO:0004311 farnesyltranstransferase activity(GO:0004311)
0.2 1.9 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.2 7.5 GO:0016597 amino acid binding(GO:0016597)
0.2 7.8 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.2 5.2 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.2 1.2 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.2 11.9 GO:0019843 rRNA binding(GO:0019843)
0.2 9.8 GO:0042393 histone binding(GO:0042393)
0.2 1.1 GO:0005457 GDP-fucose transmembrane transporter activity(GO:0005457) UDP-glucose transmembrane transporter activity(GO:0005460)
0.2 0.7 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.2 3.8 GO:0035064 methylated histone binding(GO:0035064)
0.2 8.0 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.2 3.1 GO:0050136 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.2 26.5 GO:0046982 protein heterodimerization activity(GO:0046982)
0.2 1.7 GO:0008083 growth factor activity(GO:0008083)
0.2 8.4 GO:0050897 cobalt ion binding(GO:0050897)
0.2 0.4 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.2 2.8 GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors(GO:0016645)
0.2 1.8 GO:0043495 protein anchor(GO:0043495)
0.2 0.8 GO:0003880 protein C-terminal carboxyl O-methyltransferase activity(GO:0003880) protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity(GO:0004671)
0.2 2.7 GO:0061134 peptidase regulator activity(GO:0061134)
0.2 9.4 GO:0017137 Rab GTPase binding(GO:0017137)
0.2 7.6 GO:0003714 transcription corepressor activity(GO:0003714)
0.2 3.9 GO:0060090 binding, bridging(GO:0060090)
0.2 9.3 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.2 7.7 GO:0003712 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.2 4.6 GO:0004568 chitinase activity(GO:0004568)
0.2 18.0 GO:0004601 peroxidase activity(GO:0004601)
0.2 2.7 GO:0031545 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798) peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.2 64.2 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.2 10.8 GO:0036459 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)
0.2 1.3 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.2 1.1 GO:0017112 Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.2 2.9 GO:0016018 cyclosporin A binding(GO:0016018)
0.2 0.7 GO:0004057 arginyltransferase activity(GO:0004057)
0.2 2.5 GO:0004017 adenylate kinase activity(GO:0004017)
0.2 0.9 GO:0004594 pantothenate kinase activity(GO:0004594)
0.2 3.6 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.2 2.0 GO:0036002 pre-mRNA binding(GO:0036002)
0.2 9.4 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.2 1.6 GO:0046923 ER retention sequence binding(GO:0046923)
0.2 1.0 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.2 3.0 GO:0030276 clathrin binding(GO:0030276)
0.2 3.7 GO:0022821 potassium ion antiporter activity(GO:0022821)
0.2 4.9 GO:0043130 ubiquitin binding(GO:0043130)
0.2 1.9 GO:0008641 small protein activating enzyme activity(GO:0008641)
0.2 2.3 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.2 3.7 GO:0008143 poly(A) binding(GO:0008143)
0.2 2.5 GO:0004407 histone deacetylase activity(GO:0004407) protein deacetylase activity(GO:0033558)
0.2 0.5 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.2 1.8 GO:0005048 signal sequence binding(GO:0005048)
0.2 0.9 GO:0008312 7S RNA binding(GO:0008312)
0.1 1.3 GO:0000339 RNA cap binding(GO:0000339)
0.1 1.0 GO:0001671 ATPase activator activity(GO:0001671)
0.1 6.0 GO:0019888 phosphatase regulator activity(GO:0019208) protein phosphatase regulator activity(GO:0019888)
0.1 2.7 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.1 2.0 GO:0008327 methyl-CpG binding(GO:0008327)
0.1 2.0 GO:0016251 obsolete general RNA polymerase II transcription factor activity(GO:0016251)
0.1 2.8 GO:0097602 cullin family protein binding(GO:0097602)
0.1 1.0 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.1 1.9 GO:0019905 syntaxin binding(GO:0019905)
0.1 1.0 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.1 1.0 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.1 5.3 GO:0051540 iron-sulfur cluster binding(GO:0051536) metal cluster binding(GO:0051540)
0.1 1.4 GO:0061733 histone acetyltransferase activity(GO:0004402) peptide-lysine-N-acetyltransferase activity(GO:0061733)
0.1 0.8 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.1 2.0 GO:0008536 Ran GTPase binding(GO:0008536)
0.1 1.6 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.1 1.2 GO:0015179 L-amino acid transmembrane transporter activity(GO:0015179)
0.1 1.4 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.1 1.1 GO:0051879 Hsp90 protein binding(GO:0051879)
0.1 0.3 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.1 0.4 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.1 8.3 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.1 4.0 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 0.4 GO:0032791 lead ion binding(GO:0032791)
0.1 2.0 GO:0016844 strictosidine synthase activity(GO:0016844)
0.1 1.0 GO:0008079 translation release factor activity(GO:0003747) translation termination factor activity(GO:0008079)
0.1 1.4 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.1 2.0 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.1 0.8 GO:0101005 ubiquitinyl hydrolase activity(GO:0101005)
0.1 4.2 GO:0003743 translation initiation factor activity(GO:0003743)
0.1 6.1 GO:0003682 chromatin binding(GO:0003682)
0.1 0.3 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.1 0.6 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.1 1.9 GO:0031072 heat shock protein binding(GO:0031072)
0.1 4.1 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.1 2.7 GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor(GO:0016671)
0.1 0.6 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 1.5 GO:0042162 telomeric DNA binding(GO:0042162)
0.1 4.4 GO:0010857 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.1 0.3 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)
0.1 1.3 GO:0003725 double-stranded RNA binding(GO:0003725)
0.1 2.1 GO:0051087 chaperone binding(GO:0051087)
0.1 2.1 GO:0016790 thiolester hydrolase activity(GO:0016790)
0.1 5.0 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.1 5.6 GO:0003724 RNA helicase activity(GO:0003724)
0.1 0.4 GO:0003910 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.1 0.2 GO:0004819 glutamine-tRNA ligase activity(GO:0004819)
0.1 0.4 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.1 3.8 GO:0016831 carboxy-lyase activity(GO:0016831)
0.1 1.0 GO:0004630 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.1 3.4 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.1 7.5 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.1 3.5 GO:0008234 cysteine-type peptidase activity(GO:0008234)
0.1 0.7 GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism(GO:0044769)
0.1 3.6 GO:0051082 unfolded protein binding(GO:0051082)
0.1 0.5 GO:0070300 phosphatidic acid binding(GO:0070300)
0.1 7.4 GO:0003779 actin binding(GO:0003779)
0.1 0.9 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.1 0.2 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.1 0.8 GO:0008135 translation factor activity, RNA binding(GO:0008135)
0.1 0.6 GO:0017069 snRNA binding(GO:0017069)
0.1 1.5 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.3 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.0 0.7 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 1.0 GO:0031386 protein tag(GO:0031386)
0.0 0.4 GO:0016274 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.0 0.9 GO:0080032 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.7 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.1 GO:0052629 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0 5.3 GO:0005516 calmodulin binding(GO:0005516)
0.0 0.1 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.0 6.0 GO:0005509 calcium ion binding(GO:0005509)
0.0 0.4 GO:0016307 phosphatidylinositol phosphate kinase activity(GO:0016307)
0.0 6.8 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 1.0 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.5 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.2 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.0 0.5 GO:0005543 phospholipid binding(GO:0005543)
0.0 1.0 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.3 GO:0044389 ubiquitin-like protein ligase binding(GO:0044389)
0.0 0.1 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.0 0.3 GO:0004702 receptor signaling protein serine/threonine kinase activity(GO:0004702)
0.0 0.1 GO:0017176 phosphatidylinositol N-acetylglucosaminyltransferase activity(GO:0017176)
0.0 0.2 GO:0008649 rRNA methyltransferase activity(GO:0008649)
0.0 0.6 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.0 0.6 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.1 GO:0019238 cyclohydrolase activity(GO:0019238)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.5 4.6 PID A6B1 A6B4 INTEGRIN PATHWAY a6b1 and a6b4 Integrin signaling
1.0 4.1 PID BETA CATENIN NUC PATHWAY Regulation of nuclear beta catenin signaling and target gene transcription
0.7 2.1 PID VEGFR1 PATHWAY VEGFR1 specific signals
0.6 0.6 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.6 5.3 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway
0.5 3.8 PID HDAC CLASSI PATHWAY Signaling events mediated by HDAC Class I
0.5 0.5 PID RAS PATHWAY Regulation of Ras family activation
0.4 0.4 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)
0.3 0.7 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms
0.3 1.2 PID IL2 PI3K PATHWAY IL2 signaling events mediated by PI3K
0.2 0.5 ST WNT CA2 CYCLIC GMP PATHWAY Wnt/Ca2+/cyclic GMP signaling.
0.1 0.3 ST INTEGRIN SIGNALING PATHWAY Integrin Signaling Pathway
0.1 0.6 PID ERBB1 DOWNSTREAM PATHWAY ErbB1 downstream signaling

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
2.8 2.8 REACTOME NONSENSE MEDIATED DECAY ENHANCED BY THE EXON JUNCTION COMPLEX Genes involved in Nonsense Mediated Decay Enhanced by the Exon Junction Complex
2.3 6.8 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
1.4 4.1 REACTOME CYCLIN E ASSOCIATED EVENTS DURING G1 S TRANSITION Genes involved in Cyclin E associated events during G1/S transition
1.3 6.5 REACTOME PROCESSING OF CAPPED INTRON CONTAINING PRE MRNA Genes involved in Processing of Capped Intron-Containing Pre-mRNA
0.9 7.0 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.8 2.5 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.7 5.2 REACTOME RESOLUTION OF AP SITES VIA THE MULTIPLE NUCLEOTIDE PATCH REPLACEMENT PATHWAY Genes involved in Resolution of AP sites via the multiple-nucleotide patch replacement pathway
0.5 2.2 REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES Genes involved in Recruitment of mitotic centrosome proteins and complexes
0.5 2.1 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.5 1.5 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.4 6.6 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis
0.4 1.2 REACTOME NEUROTRANSMITTER RECEPTOR BINDING AND DOWNSTREAM TRANSMISSION IN THE POSTSYNAPTIC CELL Genes involved in Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell
0.3 1.6 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.3 1.3 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.2 0.7 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.2 0.5 REACTOME HOST INTERACTIONS OF HIV FACTORS Genes involved in Host Interactions of HIV factors
0.2 1.1 REACTOME INTERFERON SIGNALING Genes involved in Interferon Signaling
0.2 2.0 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.2 2.0 REACTOME RNA POL II TRANSCRIPTION Genes involved in RNA Polymerase II Transcription
0.2 1.3 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.2 1.2 REACTOME PROTEIN FOLDING Genes involved in Protein folding
0.1 0.9 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.1 0.6 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.1 2.4 REACTOME ACTIVATION OF THE MRNA UPON BINDING OF THE CAP BINDING COMPLEX AND EIFS AND SUBSEQUENT BINDING TO 43S Genes involved in Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S
0.1 0.4 REACTOME SIGNALING BY SCF KIT Genes involved in Signaling by SCF-KIT
0.1 0.3 REACTOME SIGNALING BY ILS Genes involved in Signaling by Interleukins
0.0 0.1 REACTOME PI METABOLISM Genes involved in PI Metabolism