Project
GSE43616: Time-course of wild-type Arabidopsis leaf
Navigation
Downloads
Results for AT5G65510
Z-value: 1.15
Transcription factors associated with AT5G65510
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
AT5G65510
|
AT5G65510 | AINTEGUMENTA-like 7 |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| AIL7 | arTal_v1_Chr5_+_26185593_26185593 | 0.07 | 7.3e-01 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| arTal_v1_Chr4_-_18098633_18098633 Show fit | 8.37 |
AT4G38770.1
|
proline-rich protein 4 |
|
| arTal_v1_Chr4_+_13391293_13391344 Show fit | 5.79 |
AT4G26530.2
AT4G26530.1 |
Aldolase superfamily protein |
|
| arTal_v1_Chr4_+_13390754_13390754 Show fit | 5.58 |
AT4G26530.3
|
Aldolase superfamily protein |
|
| arTal_v1_Chr2_-_9428170_9428170 Show fit | 4.78 |
AT2G22170.1
|
Lipase/lipooxygenase, PLAT/LH2 family protein |
|
| arTal_v1_Chr4_+_14215473_14215473 Show fit | 4.46 |
AT4G28780.1
|
GDSL-like Lipase/Acylhydrolase superfamily protein |
|
| arTal_v1_Chr4_-_16583075_16583075 Show fit | 4.26 |
AT4G34760.1
|
SAUR-like auxin-responsive protein family |
|
| arTal_v1_Chr4_+_11202728_11202728 Show fit | 3.95 |
AT4G20940.1
|
Leucine-rich receptor-like protein kinase family protein |
|
| arTal_v1_Chr5_+_2680401_2680401 Show fit | 3.65 |
AT5G08330.1
|
TCP family transcription factor |
|
| arTal_v1_Chr5_-_21068327_21068327 Show fit | 3.55 |
AT5G51820.1
|
phosphoglucomutase |
|
| arTal_v1_Chr3_-_20142763_20142763 Show fit | 3.32 |
AT3G54400.1
|
Eukaryotic aspartyl protease family protein |
Network of associatons between targets according to the STRING database.
First level regulatory network of AT5G65510
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.6 | 11.4 | GO:0030388 | fructose 1,6-bisphosphate metabolic process(GO:0030388) |
| 2.0 | 5.9 | GO:0015742 | alpha-ketoglutarate transport(GO:0015742) |
| 0.0 | 5.0 | GO:0046777 | protein autophosphorylation(GO:0046777) |
| 1.3 | 4.0 | GO:1903961 | positive regulation of transporter activity(GO:0032411) positive regulation of ion transmembrane transporter activity(GO:0032414) cellular response to absence of light(GO:0071485) positive regulation of anion channel activity(GO:1901529) positive regulation of anion transport(GO:1903793) positive regulation of anion transmembrane transport(GO:1903961) |
| 0.7 | 3.5 | GO:0009590 | detection of gravity(GO:0009590) |
| 0.0 | 3.4 | GO:0007017 | microtubule-based process(GO:0007017) |
| 0.1 | 3.2 | GO:0010109 | regulation of photosynthesis(GO:0010109) |
| 0.0 | 3.0 | GO:0045490 | pectin catabolic process(GO:0045490) |
| 0.3 | 2.9 | GO:0046466 | membrane lipid catabolic process(GO:0046466) |
| 0.1 | 2.9 | GO:0009556 | microsporogenesis(GO:0009556) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 12.5 | GO:0030312 | cell wall(GO:0005618) external encapsulating structure(GO:0030312) |
| 0.0 | 7.1 | GO:0009941 | chloroplast envelope(GO:0009941) |
| 0.0 | 6.4 | GO:0099503 | secretory vesicle(GO:0099503) |
| 0.1 | 3.5 | GO:0010319 | stromule(GO:0010319) |
| 0.0 | 2.8 | GO:0031225 | anchored component of membrane(GO:0031225) |
| 0.0 | 2.6 | GO:0005770 | late endosome(GO:0005770) |
| 0.2 | 2.2 | GO:0045298 | tubulin complex(GO:0045298) |
| 0.4 | 1.4 | GO:0010330 | cellulose synthase complex(GO:0010330) |
| 0.3 | 1.4 | GO:0048476 | Holliday junction resolvase complex(GO:0048476) |
| 0.1 | 1.4 | GO:0009574 | preprophase band(GO:0009574) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.8 | 11.4 | GO:0004332 | fructose-bisphosphate aldolase activity(GO:0004332) |
| 0.1 | 9.8 | GO:0004650 | polygalacturonase activity(GO:0004650) |
| 1.2 | 5.9 | GO:0015367 | oxoglutarate:malate antiporter activity(GO:0015367) |
| 0.5 | 4.8 | GO:0004096 | catalase activity(GO:0004096) |
| 0.7 | 3.5 | GO:0004614 | phosphoglucomutase activity(GO:0004614) |
| 0.0 | 3.5 | GO:0051015 | actin filament binding(GO:0051015) |
| 0.1 | 3.3 | GO:0004190 | aspartic-type endopeptidase activity(GO:0004190) |
| 0.4 | 3.2 | GO:0016464 | chloroplast protein-transporting ATPase activity(GO:0016464) |
| 0.2 | 3.2 | GO:0070290 | phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290) |
| 0.0 | 3.1 | GO:0016209 | antioxidant activity(GO:0016209) |
Gene overrepresentation in curated gene sets: canonical pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 1.1 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
| 0.1 | 0.5 | PID ECADHERIN NASCENT AJ PATHWAY | E-cadherin signaling in the nascent adherens junction |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.4 | 1.1 | REACTOME ABACAVIR TRANSPORT AND METABOLISM | Genes involved in Abacavir transport and metabolism |
| 0.2 | 1.1 | REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Dopamine Neurotransmitter Release Cycle |
| 0.0 | 0.1 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |