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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G64750

Z-value: 1.05

Transcription factors associated with AT5G64750

Gene Symbol Gene ID Gene Info
AT5G64750 Integrase-type DNA-binding superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ABR1arTal_v1_Chr5_+_25891449_25891449-0.763.1e-06Click!

Activity profile of AT5G64750 motif

Sorted Z-values of AT5G64750 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_+_3157501 6.79 AT1G09750.1
Eukaryotic aspartyl protease family protein
Chr2_-_18744322 6.33 AT2G45470.1
FASCICLIN-like arabinogalactan protein 8
Chr3_-_21523375 5.95 AT3G58120.2
AT3G58120.1
Basic-leucine zipper (bZIP) transcription factor family protein
Chr4_-_7493080 5.74 AT4G12730.1
FASCICLIN-like arabinogalactan 2
Chr1_-_7531108 5.64 AT1G21500.1
hypothetical protein
Chr1_+_10371675 5.62 AT1G29660.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_3357754 5.54 AT3G10720.2
Plant invertase/pectin methylesterase inhibitor superfamily
Chr3_-_11013451 5.52 AT3G29030.1
expansin A5
Chr2_+_2199151 5.47 AT2G05790.1
O-Glycosyl hydrolases family 17 protein
Chr1_-_20648891 5.39 AT1G55330.1
arabinogalactan protein 21
Chr2_+_8940833 4.90 AT2G20750.2
AT2G20750.1
expansin B1
Chr3_-_4744263 4.86 AT3G14240.1
Subtilase family protein
Chr4_+_6100714 4.85 AT4G09650.1
F-type H+-transporting ATPase subunit delta
Chr3_-_3356811 4.68 AT3G10720.1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr5_-_22560461 4.59 AT5G55730.2
AT5G55730.1
FASCICLIN-like arabinogalactan 1
Chr1_-_4530222 4.57 AT1G13250.1
galacturonosyltransferase-like 3
Chr2_-_15137012 4.44 AT2G36050.1
ovate family protein 15
Chr5_+_7502427 4.43 AT5G22580.1
Stress responsive A/B Barrel Domain-containing protein
Chr5_-_25373904 4.39 AT5G63310.1
nucleoside diphosphate kinase 2
Chr1_+_898480 4.36 AT1G03600.1
photosystem II family protein
Chr2_+_13647699 4.29 AT2G32100.1
ovate family protein 16
Chr2_-_15790139 4.08 AT2G37640.1
Barwin-like endoglucanases superfamily protein
Chr2_-_15789605 4.07 AT2G37640.2
Barwin-like endoglucanases superfamily protein
Chr3_-_19595834 4.02 AT3G52870.1
IQ calmodulin-binding motif family protein
Chr3_-_5469594 3.96 AT3G16140.1
photosystem I subunit H-1
Chr1_+_4899045 3.95 AT1G14345.1
NAD(P)-linked oxidoreductase superfamily protein
Chr5_-_7026533 3.94 AT5G20740.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_-_26515188 3.92 AT1G70370.2
AT1G70370.1
polygalacturonase 2
Chr3_-_2130451 3.91 AT3G06750.1
hydroxyproline-rich glycoprotein family protein
Chr1_-_4265156 3.90 AT1G12500.1
Nucleotide-sugar transporter family protein
Chr1_+_4839801 3.87 AT1G14150.1
AT1G14150.2
PsbQ-like 2
Chr2_-_12173951 3.86 AT2G28470.2
AT2G28470.4
AT2G28470.1
AT2G28470.3
beta-galactosidase 8
Chr3_+_19421397 3.81 AT3G52380.1
chloroplast RNA-binding protein 33
Chr3_+_18262290 3.78 AT3G49260.1
AT3G49260.3
AT3G49260.2
AT3G49260.4
IQ-domain 21
Chr4_+_12876822 3.78 AT4G25080.6
AT4G25080.5
AT4G25080.2
AT4G25080.1
AT4G25080.3
AT4G25080.4
magnesium-protoporphyrin IX methyltransferase
Chr3_+_188321 3.76 AT3G01480.1
AT3G01480.2
cyclophilin 38
Chr3_+_2563803 3.73 AT3G08030.1
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
Chr1_+_2047886 3.71 AT1G06680.2
photosystem II subunit P-1
Chr1_-_464981 3.71 AT1G02335.1
germin-like protein subfamily 2 member 2 precursor
Chr1_+_2047634 3.71 AT1G06680.1
photosystem II subunit P-1
Chr5_-_7026753 3.68 AT5G20740.2
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr3_+_2564153 3.68 AT3G08030.2
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
Chr5_-_24990331 3.65 AT5G62220.1
glycosyltransferase 18
Chr2_-_7496292 3.64 AT2G17230.1
EXORDIUM like 5
Chr2_+_14216771 3.62 AT2G33570.1
glycosyltransferase family protein (DUF23)
Chr1_+_24229063 3.62 AT1G65230.1
transmembrane protein, putative (DUF2358)
Chr1_+_29117500 3.59 AT1G77490.1
AT1G77490.2
thylakoidal ascorbate peroxidase
Chr1_+_23911024 3.56 AT1G64390.1
glycosyl hydrolase 9C2
Chr3_+_22902491 3.54 AT3G61870.1
AT3G61870.2
plant/protein
Chr5_+_24494291 3.53 AT5G60890.1
myb domain protein 34
Chr3_-_15617149 3.53 AT3G43720.2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_25374072 3.49 AT1G67700.1
AT1G67700.2
AT1G67700.5
AT1G67700.4
AT1G67700.3
multidrug resistance protein
Chr3_-_15617309 3.48 AT3G43720.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_2993213 3.42 AT5G09650.1
pyrophosphorylase 6
Chr5_+_1952505 3.41 AT5G06390.1
FASCICLIN-like arabinogalactan protein 17 precursor
Chr5_+_5078200 3.39 AT5G15600.1
AT5G15600.2
SPIRAL1-like4
Chr5_-_20940895 3.38 AT5G51550.1
EXORDIUM like 3
Chr1_+_310169 3.37 AT1G01900.1
subtilase family protein
Chr5_+_8365601 3.37 AT5G24490.1
30S ribosomal protein
Chr3_-_6436046 3.36 AT3G18710.1
plant U-box 29
Chr3_+_20016837 3.33 AT3G54050.1
AT3G54050.2
high cyclic electron flow 1
Chr5_+_25016860 3.33 AT5G62280.1
DUF1442 family protein (DUF1442)
Chr4_+_12220641 3.33 AT4G23400.1
plasma membrane intrinsic protein 1;5
Chr4_+_9906821 3.31 AT4G17810.1
AT4G17810.2
C2H2 and C2HC zinc fingers superfamily protein
Chr4_-_7545326 3.30 AT4G12880.2
early nodulin-like protein 19
Chr4_-_7545512 3.29 AT4G12880.1
early nodulin-like protein 19
Chr4_+_17986384 3.26 AT4G38430.1
rho guanyl-nucleotide exchange factor 1
Chr5_+_6387341 3.24 AT5G19090.1
AT5G19090.4
AT5G19090.3
AT5G19090.2
Heavy metal transport/detoxification superfamily protein
Chr3_+_6752422 3.22 AT3G19480.1
D-3-phosphoglycerate dehydrogenase
Chr5_+_2803833 3.21 AT5G08640.1
AT5G08640.2
flavonol synthase 1
Chr3_-_20576249 3.21 AT3G55500.1
expansin A16
Chr5_+_5820969 3.20 AT5G17670.1
alpha/beta-Hydrolases superfamily protein
Chr1_-_28581315 3.18 AT1G76160.1
SKU5 similar 5
Chr1_-_1169034 3.17 AT1G04360.1
RING/U-box superfamily protein
Chr3_-_20257916 3.16 AT3G54720.1
Peptidase M28 family protein
Chr2_+_11856571 3.08 AT2G27820.1
prephenate dehydratase 1
Chr2_-_5051613 3.07 AT2G12462.1
sterile alpha motif (SAM) domain protein
Chr3_+_19639549 3.06 AT3G52960.1
Thioredoxin superfamily protein
Chr1_-_11548016 3.06 AT1G32100.1
pinoresinol reductase 1
Chr2_+_6518749 3.04 AT2G15050.3
AT2G15050.1
AT2G15050.2
lipid transfer protein
Chr3_-_2944457 3.00 AT3G09580.1
FAD/NAD(P)-binding oxidoreductase family protein
Chr5_+_7394443 3.00 AT5G22340.1
AT5G22340.2
NF-kappa-B inhibitor-like protein
Chr4_-_947075 3.00 AT4G02130.2
AT4G02130.3
galacturonosyltransferase 6
Chr5_+_15742543 2.98 AT5G39320.1
UDP-glucose 6-dehydrogenase family protein
Chr4_-_1230164 2.96 AT4G02770.1
photosystem I subunit D-1
Chr3_-_1855063 2.96 AT3G06130.2
AT3G06130.1
Heavy metal transport/detoxification superfamily protein
Chr1_+_28498821 2.95 AT1G75900.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_21028137 2.94 AT1G56190.1
AT1G56190.2
Phosphoglycerate kinase family protein
Chr3_-_1136397 2.93 AT3G04290.1
Li-tolerant lipase 1
Chr5_-_14199431 2.93 AT5G36120.1
cofactor assembly, complex C (B6F)
Chr1_-_754262 2.92 AT1G03130.1
photosystem I subunit D-2
Chr4_-_14439723 2.90 AT4G29310.1
AT4G29310.2
DUF1005 family protein (DUF1005)
Chr4_-_10278794 2.90 AT4G18670.1
Leucine-rich repeat (LRR) family protein
Chr2_+_14849357 2.88 AT2G35260.1
CAAX protease self-immunity protein
Chr5_-_9242854 2.88 AT5G26330.1
Cupredoxin superfamily protein
Chr2_+_15445294 2.87 AT2G36830.1
gamma tonoplast intrinsic protein
Chr3_-_19791695 2.86 AT3G53380.1
Concanavalin A-like lectin protein kinase family protein
Chr3_-_6980523 2.85 AT3G20015.1
Eukaryotic aspartyl protease family protein
Chr1_+_21159736 2.81 AT1G56500.2
AT1G56500.1
AT1G56500.3
haloacid dehalogenase-like hydrolase family protein
Chr5_+_7168106 2.81 AT5G21100.1
Plant L-ascorbate oxidase
Chr1_-_8235019 2.81 AT1G23205.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr5_-_16061043 2.80 AT5G40150.1
Peroxidase superfamily protein
Chr5_-_3728726 2.79 AT5G11590.1
Integrase-type DNA-binding superfamily protein
Chr2_+_11481326 2.79 AT2G26910.1
pleiotropic drug resistance 4
Chr1_+_18351324 2.77 AT1G49580.1
Calcium-dependent protein kinase (CDPK) family protein
Chr2_-_183639 2.76 AT2G01420.3
AT2G01420.1
AT2G01420.2
Auxin efflux carrier family protein
Chr3_-_22881775 2.75 AT3G61820.1
Eukaryotic aspartyl protease family protein
Chr1_-_8559066 2.75 AT1G24170.1
Nucleotide-diphospho-sugar transferases superfamily protein
Chr4_-_947249 2.75 AT4G02130.1
galacturonosyltransferase 6
Chr1_-_3443957 2.73 AT1G10470.3
AT1G10470.2
response regulator 4
Chr4_+_10231218 2.72 AT4G18570.2
AT4G18570.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_3709403 2.70 AT5G11550.1
ARM repeat superfamily protein
Chr1_-_3444360 2.70 AT1G10470.1
response regulator 4
Chr4_+_7336330 2.70 AT4G12390.1
pectin methylesterase inhibitor 1
Chr4_-_11785937 2.69 AT4G22290.1
Ubiquitin-specific protease family C19-related protein
Chr1_+_4735474 2.69 AT1G13820.1
alpha/beta-Hydrolases superfamily protein
Chr3_-_22295529 2.69 AT3G60320.1
bZIP domain class transcription factor (DUF630 and DUF632)
Chr5_+_26572265 2.68 AT5G66580.1
hypothetical protein
Chr2_-_9073233 2.68 AT2G21170.2
AT2G21170.1
triosephosphate isomerase
Chr4_-_13496738 2.67 AT4G26830.1
AT4G26830.2
O-Glycosyl hydrolases family 17 protein
Chr3_-_19747114 2.67 AT3G53260.1
phenylalanine ammonia-lyase 2
Chr1_-_12054753 2.65 AT1G33240.1
AT1G33240.3
GT-2-like 1
Chr3_-_2137012 2.64 AT3G06770.1
AT3G06770.5
Pectin lyase-like superfamily protein
Chr2_-_9074470 2.64 AT2G21170.3
triosephosphate isomerase
Chr1_-_12053935 2.63 AT1G33240.2
GT-2-like 1
Chr5_-_3278461 2.62 AT5G10430.1
arabinogalactan protein 4
Chr1_+_4159227 2.62 AT1G12250.1
AT1G12250.3
AT1G12250.2
Pentapeptide repeat-containing protein
Chr3_-_2137280 2.61 AT3G06770.4
AT3G06770.3
Pectin lyase-like superfamily protein
Chr1_-_26560123 2.59 AT1G70470.1
transmembrane protein
Chr4_+_12376122 2.59 AT4G23750.1
AT4G23750.2
cytokinin response factor 2
Chr3_+_16569051 2.58 AT3G45230.1
hydroxyproline-rich glycoprotein family protein
Chr2_-_13120199 2.58 AT2G30790.1
photosystem II subunit P-2
Chr4_+_14566183 2.58 AT4G29740.3
AT4G29740.2
AT4G29740.1
cytokinin oxidase 4
Chr1_+_2263037 2.57 AT1G07370.1
proliferating cellular nuclear antigen 1
Chr1_-_30387602 2.54 AT1G80850.1
DNA glycosylase superfamily protein
Chr2_+_1679307 2.53 AT2G04790.10
AT2G04790.6
AT2G04790.5
AT2G04790.7
AT2G04790.9
AT2G04790.8
AT2G04790.13
AT2G04790.12
AT2G04790.11
AT2G04790.14
AT2G04790.15
AT2G04790.16
AT2G04790.4
AT2G04790.3
AT2G04790.1
AT2G04790.2
PTB domain engulfment adapter
Chr2_+_11852078 2.53 AT2G27810.1
AT2G27810.3
AT2G27810.2
AT2G27810.4
nucleobase-ascorbate transporter 12
Chr1_-_6278150 2.48 AT1G18250.2
AT1G18250.1
Pathogenesis-related thaumatin superfamily protein
Chr4_-_9754161 2.48 AT4G17490.1
ethylene responsive element binding factor 6
Chr4_+_12086898 2.47 AT4G23060.1
IQ-domain 22
Chr3_+_9460433 2.47 AT3G25860.1
2-oxoacid dehydrogenases acyltransferase family protein
Chr1_-_29716255 2.47 AT1G78995.1
hypothetical protein
Chr3_-_18892508 2.46 AT3G50820.1
photosystem II subunit O-2
Chr4_+_8470179 2.45 AT4G14750.2
AT4G14750.3
AT4G14750.1
IQ-domain 19
Chr2_+_16011233 2.44 AT2G38230.1
pyridoxine biosynthesis 1.1
Chr3_-_17138259 2.44 AT3G46550.1
Fasciclin-like arabinogalactan family protein
Chr1_-_4217412 2.44 AT1G12380.1
hypothetical protein
Chr5_+_72292 2.43 AT5G01190.2
AT5G01190.1
laccase 10
Chr3_+_21419449 2.42 AT3G57830.1
AT3G57830.2
AT3G57830.3
Leucine-rich repeat protein kinase family protein
Chr4_-_14627631 2.41 AT4G29905.1
hypothetical protein
Chr5_-_20110638 2.41 AT5G49555.1
FAD/NAD(P)-binding oxidoreductase family protein
Chr1_-_9458176 2.39 AT1G27210.1
ARM repeat superfamily protein
Chr2_+_16049918 2.38 AT2G38310.1
PYR1-like 4
Chr1_+_20048434 2.37 AT1G53700.1
WAG 1
Chr5_+_6387735 2.36 AT5G19090.5
Heavy metal transport/detoxification superfamily protein
Chr2_-_12173679 2.36 AT2G28470.5
beta-galactosidase 8
Chr3_+_21680027 2.36 AT3G58620.1
AT3G58620.2
tetratricopetide-repeat thioredoxin-like 4
Chr3_-_4775258 2.35 AT3G14310.1
pectin methylesterase 3
Chr5_+_22175461 2.35 AT5G54585.1
hypothetical protein
Chr2_+_19472573 2.34 AT2G47450.1
chloroplast signal recognition particle component (CAO)
Chr2_+_19283456 2.33 AT2G46930.1
Pectinacetylesterase family protein
Chr1_+_27778984 2.33 AT1G73870.1
B-box type zinc finger protein with CCT domain-containing protein
Chr3_-_2407634 2.33 AT3G07540.1
Actin-binding FH2 (formin homology 2) family protein
Chr1_+_21395096 2.32 AT1G57770.1
FAD/NAD(P)-binding oxidoreductase family protein
Chr2_+_16869189 2.32 AT2G40400.1
AT2G40400.2
AT2G40400.3
DUF399 family protein, putative (DUF399 and DUF3411)
Chr5_-_8412240 2.31 AT5G24580.3
AT5G24580.2
Heavy metal transport/detoxification superfamily protein
Chr1_-_3272110 2.30 AT1G10020.1
formin-like protein (DUF1005)
Chr5_+_25191860 2.29 AT5G62720.2
Integral membrane HPP family protein
Chr1_-_8940613 2.28 AT1G25450.1
3-ketoacyl-CoA synthase 5
Chr1_+_195812 2.28 AT1G01540.1
Protein kinase superfamily protein
Chr5_-_24728244 2.28 AT5G61480.1
Leucine-rich repeat protein kinase family protein
Chr1_+_195645 2.28 AT1G01540.2
Protein kinase superfamily protein
Chr4_+_6836106 2.27 AT4G11211.1
hypothetical protein
Chr5_+_25191402 2.27 AT5G62720.1
Integral membrane HPP family protein
Chr2_+_12805667 2.26 AT2G30010.2
AT2G30010.1
TRICHOME BIREFRINGENCE-LIKE 45
Chr3_-_8683289 2.25 AT3G24040.1
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Chr3_-_9428277 2.25 AT3G25805.1
transmembrane protein
Chr2_-_2272452 2.24 AT2G05920.1
Subtilase family protein
Chr5_-_17635915 2.23 AT5G43870.1
AT5G43870.2
auxin canalization protein (DUF828)
Chr2_+_18537177 2.23 AT2G44940.1
Integrase-type DNA-binding superfamily protein
Chr1_-_27496969 2.23 AT1G73110.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_-_2190784 2.22 AT1G07135.1
glycine-rich protein
Chr5_+_4156501 2.22 AT5G13100.1
Gap junction beta-4 protein
Chr4_+_17739514 2.21 AT4G37750.1
Integrase-type DNA-binding superfamily protein
Chr2_-_10219396 2.21 AT2G24020.2
AT2G24020.1
Putative BCR, YbaB family COG0718
Chr4_-_17979740 2.20 AT4G38400.1
AT4G38401.1
expansin-like A2
hypothetical protein
Chr2_-_12685145 2.20 AT2G29670.2
AT2G29670.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_8412453 2.19 AT5G24580.1
AT5G24580.4
Heavy metal transport/detoxification superfamily protein
Chr1_-_8310916 2.19 AT1G23390.1
Kelch repeat-containing F-box family protein
Chr4_+_15875342 2.18 AT4G32890.1
GATA transcription factor 9
Chr1_-_22249721 2.17 AT1G60390.1
polygalacturonase 1
Chr2_+_15686650 2.16 AT2G37380.1
membrane-associated kinase regulator
Chr1_-_7479033 2.15 AT1G21350.2
AT1G21350.4
AT1G21350.1
AT1G21350.3
Thioredoxin superfamily protein
Chr3_+_8648669 2.14 AT3G23940.1
AT3G23940.2
dehydratase family
Chr2_+_11595076 2.13 AT2G27130.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_-_16603059 2.12 AT2G39800.2
AT2G39800.4
AT2G39800.3
delta1-pyrroline-5-carboxylate synthase 1
Chr5_-_26899736 2.12 AT5G67411.1
GRAS family transcription factor
Chr4_+_133643 2.12 AT4G00310.1
AT4G00310.2
Putative membrane lipoprotein
Chr2_+_14066125 2.11 AT2G33180.1
hypothetical protein
Chr1_+_4688018 2.11 AT1G13670.1
hypothetical protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G64750

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.8 5.3 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
1.5 4.5 GO:0080051 cutin transport(GO:0080051)
1.1 3.4 GO:0045900 negative regulation of translational elongation(GO:0045900)
1.1 4.4 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
1.0 2.9 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.9 17.0 GO:0006949 syncytium formation(GO:0006949)
0.9 4.4 GO:0042549 photosystem II stabilization(GO:0042549)
0.9 2.6 GO:0010198 synergid death(GO:0010198)
0.9 1.7 GO:0010376 stomatal complex formation(GO:0010376)
0.8 2.4 GO:0006434 seryl-tRNA aminoacylation(GO:0006434) selenocysteinyl-tRNA(Sec) biosynthetic process(GO:0097056)
0.8 5.3 GO:0009099 valine biosynthetic process(GO:0009099)
0.7 3.0 GO:0030203 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.7 4.4 GO:0006228 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.7 4.2 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.7 4.8 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.7 3.4 GO:0050810 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.6 1.3 GO:0040019 positive regulation of embryonic development(GO:0040019)
0.6 3.1 GO:0009806 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.6 2.9 GO:0010226 response to lithium ion(GO:0010226)
0.6 2.3 GO:0048656 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.5 1.6 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.5 7.6 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.5 3.3 GO:0051098 regulation of binding(GO:0051098)
0.5 5.3 GO:2000037 negative regulation of DNA endoreduplication(GO:0032876) regulation of stomatal complex patterning(GO:2000037)
0.5 3.1 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.5 1.6 GO:2000001 regulation of DNA damage checkpoint(GO:2000001)
0.5 3.6 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.5 1.5 GO:1902292 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.5 2.4 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.5 2.9 GO:0006272 leading strand elongation(GO:0006272)
0.5 3.3 GO:0006000 fructose metabolic process(GO:0006000)
0.5 1.4 GO:0002009 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.5 2.3 GO:0006571 tyrosine biosynthetic process(GO:0006571)
0.4 2.7 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.4 1.8 GO:0051455 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation(GO:0051316) attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation(GO:0051455) microtubule cytoskeleton organization involved in homologous chromosome segregation(GO:0090172)
0.4 1.3 GO:0009143 nucleoside triphosphate catabolic process(GO:0009143)
0.4 1.3 GO:0045835 regulation of reciprocal meiotic recombination(GO:0010520) negative regulation of meiotic nuclear division(GO:0045835) negative regulation of meiotic cell cycle(GO:0051447)
0.4 1.7 GO:0015854 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.4 1.7 GO:0006426 glycyl-tRNA aminoacylation(GO:0006426)
0.4 3.2 GO:0016045 detection of bacterium(GO:0016045)
0.4 4.4 GO:0010206 photosystem II repair(GO:0010206)
0.4 1.6 GO:0006808 regulation of nitrogen utilization(GO:0006808)
0.4 4.7 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.4 2.0 GO:0036388 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.4 2.3 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.4 1.2 GO:0090615 mitochondrial mRNA processing(GO:0090615)
0.4 1.5 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.4 6.1 GO:0010315 auxin efflux(GO:0010315)
0.4 1.1 GO:1900151 regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay(GO:1900151)
0.4 2.9 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.4 1.4 GO:0010500 transmitting tissue development(GO:0010500)
0.4 1.4 GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0010322)
0.4 9.7 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.4 0.7 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.3 14.6 GO:0045489 pectin biosynthetic process(GO:0045489)
0.3 1.4 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.3 4.1 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.3 1.0 GO:0090207 hexokinase-dependent signaling(GO:0009747) regulation of triglyceride metabolic process(GO:0090207)
0.3 1.0 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.3 1.0 GO:0010541 acropetal auxin transport(GO:0010541)
0.3 2.3 GO:0010067 procambium histogenesis(GO:0010067)
0.3 2.9 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.3 1.3 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.3 3.5 GO:0009098 leucine biosynthetic process(GO:0009098)
0.3 1.9 GO:0010731 protein glutathionylation(GO:0010731)
0.3 1.2 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.3 0.9 GO:0015709 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.3 2.0 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.3 1.4 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.3 0.8 GO:0030638 polyketide metabolic process(GO:0030638)
0.3 9.3 GO:0042335 cuticle development(GO:0042335)
0.3 1.1 GO:0015739 sialic acid transport(GO:0015739)
0.3 3.9 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.2 1.2 GO:0070525 tRNA threonylcarbamoyladenosine metabolic process(GO:0070525)
0.2 2.4 GO:0033619 membrane protein proteolysis(GO:0033619)
0.2 1.4 GO:0006013 mannose metabolic process(GO:0006013)
0.2 0.9 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.2 0.9 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.2 19.0 GO:0045490 pectin catabolic process(GO:0045490)
0.2 1.9 GO:0031542 positive regulation of anthocyanin biosynthetic process(GO:0031542)
0.2 9.8 GO:0016485 protein processing(GO:0016485)
0.2 3.8 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.2 1.2 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.2 3.6 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.2 1.8 GO:0009799 specification of symmetry(GO:0009799)
0.2 0.8 GO:0071415 cellular response to alkaloid(GO:0071312) cellular response to caffeine(GO:0071313) cellular response to purine-containing compound(GO:0071415) negative regulation of cellular response to caffeine(GO:1901181)
0.2 1.2 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.2 1.0 GO:0010362 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.2 0.4 GO:0042814 monopolar cell growth(GO:0042814)
0.2 3.3 GO:0009641 shade avoidance(GO:0009641)
0.2 1.8 GO:0048826 cotyledon morphogenesis(GO:0048826)
0.2 0.7 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.2 1.1 GO:0090057 root radial pattern formation(GO:0090057)
0.2 0.9 GO:0010587 miRNA metabolic process(GO:0010586) miRNA catabolic process(GO:0010587)
0.2 0.5 GO:0043132 NAD transport(GO:0043132)
0.2 1.5 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.2 0.7 GO:0001578 microtubule bundle formation(GO:0001578)
0.2 0.8 GO:0046622 positive regulation of organ growth(GO:0046622)
0.2 0.5 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.2 0.6 GO:0009647 skotomorphogenesis(GO:0009647)
0.2 0.5 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.2 2.9 GO:0010207 photosystem II assembly(GO:0010207)
0.2 0.9 GO:0046717 acid secretion(GO:0046717)
0.2 2.0 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.2 1.1 GO:0010358 leaf shaping(GO:0010358)
0.2 1.2 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.1 2.1 GO:0000103 sulfate assimilation(GO:0000103)
0.1 1.6 GO:0042344 indole glucosinolate catabolic process(GO:0042344)
0.1 0.4 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.1 0.7 GO:0080175 phragmoplast microtubule organization(GO:0080175)
0.1 0.4 GO:0019367 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.1 2.2 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.1 12.4 GO:0019684 photosynthesis, light reaction(GO:0019684)
0.1 1.2 GO:0006655 phosphatidylglycerol biosynthetic process(GO:0006655)
0.1 4.0 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.1 4.0 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.1 1.6 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.1 1.9 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.1 2.3 GO:0006863 purine nucleobase transport(GO:0006863)
0.1 1.7 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.1 0.6 GO:0048830 adventitious root development(GO:0048830)
0.1 1.2 GO:0051446 positive regulation of meiotic cell cycle(GO:0051446)
0.1 1.9 GO:0009299 mRNA transcription(GO:0009299)
0.1 1.1 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.1 1.1 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.1 1.2 GO:0080086 stamen filament development(GO:0080086)
0.1 0.9 GO:0043486 histone exchange(GO:0043486)
0.1 3.7 GO:0048825 cotyledon development(GO:0048825)
0.1 2.6 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.1 3.0 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.1 3.8 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.1 0.7 GO:0009827 plant-type cell wall modification(GO:0009827)
0.1 1.2 GO:0010077 maintenance of inflorescence meristem identity(GO:0010077)
0.1 1.5 GO:0010274 hydrotropism(GO:0010274)
0.1 0.4 GO:0009102 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.1 1.9 GO:0042726 flavin-containing compound metabolic process(GO:0042726)
0.1 3.0 GO:0006284 base-excision repair(GO:0006284)
0.1 2.3 GO:0030071 regulation of mitotic metaphase/anaphase transition(GO:0030071) regulation of metaphase/anaphase transition of cell cycle(GO:1902099)
0.1 3.5 GO:0051225 spindle assembly(GO:0051225)
0.1 1.0 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.1 1.3 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.1 2.2 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.1 0.9 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.1 0.3 GO:0042724 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.1 4.8 GO:0042752 regulation of circadian rhythm(GO:0042752)
0.1 1.5 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.1 0.7 GO:0030497 fatty acid elongation(GO:0030497)
0.1 2.6 GO:0050918 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)
0.1 1.8 GO:0010051 xylem and phloem pattern formation(GO:0010051)
0.1 1.0 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.1 0.5 GO:0032352 positive regulation of hormone metabolic process(GO:0032352) positive regulation of auxin metabolic process(GO:0090355)
0.1 1.7 GO:0071218 protein stabilization(GO:0050821) cellular response to misfolded protein(GO:0071218)
0.1 1.4 GO:0002098 tRNA wobble uridine modification(GO:0002098)
0.1 0.8 GO:0052548 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.1 3.5 GO:0051510 regulation of unidimensional cell growth(GO:0051510)
0.1 1.7 GO:0006743 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.1 0.4 GO:0034035 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.1 2.0 GO:0008356 asymmetric cell division(GO:0008356)
0.1 0.6 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.1 0.6 GO:0009082 branched-chain amino acid biosynthetic process(GO:0009082)
0.1 3.8 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.1 2.1 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.1 0.2 GO:0006570 tyrosine metabolic process(GO:0006570)
0.1 1.4 GO:0046219 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.1 1.9 GO:0045168 cell-cell signaling involved in cell fate commitment(GO:0045168)
0.1 0.9 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.1 4.6 GO:0009627 systemic acquired resistance(GO:0009627)
0.1 0.2 GO:0010433 nectary development(GO:0010254) bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.1 1.6 GO:0007267 cell-cell signaling(GO:0007267)
0.1 0.8 GO:0010072 primary shoot apical meristem specification(GO:0010072)
0.1 0.2 GO:0007041 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.1 0.3 GO:2000142 regulation of DNA-templated transcription, initiation(GO:2000142)
0.0 0.7 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.0 0.2 GO:0046218 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.0 1.1 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 0.6 GO:0046620 regulation of organ growth(GO:0046620)
0.0 0.2 GO:0015800 acidic amino acid transport(GO:0015800)
0.0 1.1 GO:0007093 mitotic cell cycle checkpoint(GO:0007093)
0.0 1.4 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.0 0.9 GO:0008360 regulation of cell shape(GO:0008360)
0.0 0.4 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.0 0.8 GO:0080022 primary root development(GO:0080022)
0.0 1.4 GO:0009696 salicylic acid metabolic process(GO:0009696)
0.0 2.3 GO:0048544 cell recognition(GO:0008037) recognition of pollen(GO:0048544)
0.0 0.1 GO:0042989 sequestering of actin monomers(GO:0042989)
0.0 0.2 GO:0030104 water homeostasis(GO:0030104)
0.0 0.5 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.0 0.7 GO:2000008 regulation of protein localization to cell surface(GO:2000008)
0.0 0.6 GO:0006298 mismatch repair(GO:0006298)
0.0 1.3 GO:0009142 nucleoside triphosphate biosynthetic process(GO:0009142)
0.0 1.1 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.6 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.0 0.5 GO:0010091 trichome branching(GO:0010091)
0.0 0.4 GO:0015749 monosaccharide transport(GO:0015749)
0.0 0.3 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.0 0.9 GO:0006506 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)
0.0 0.2 GO:0043467 regulation of generation of precursor metabolites and energy(GO:0043467)
0.0 0.7 GO:0046856 phospholipid dephosphorylation(GO:0046839) phosphatidylinositol dephosphorylation(GO:0046856)
0.0 1.4 GO:0007276 gamete generation(GO:0007276)
0.0 0.5 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.0 0.4 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.0 1.9 GO:0009561 megagametogenesis(GO:0009561)
0.0 0.8 GO:0016575 histone deacetylation(GO:0016575)
0.0 0.3 GO:0010215 cellulose microfibril organization(GO:0010215)
0.0 1.0 GO:0006414 translational elongation(GO:0006414)
0.0 0.6 GO:0071472 cellular response to salt stress(GO:0071472)
0.0 1.6 GO:0048511 circadian rhythm(GO:0007623) rhythmic process(GO:0048511)
0.0 0.7 GO:0009644 response to high light intensity(GO:0009644)
0.0 0.7 GO:0010027 thylakoid membrane organization(GO:0010027)
0.0 0.9 GO:0010311 lateral root formation(GO:0010311)
0.0 0.6 GO:0006289 nucleotide-excision repair(GO:0006289)
0.0 1.8 GO:0018209 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.0 0.2 GO:0042732 D-xylose metabolic process(GO:0042732)
0.0 0.7 GO:0010026 trichome differentiation(GO:0010026)
0.0 0.2 GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway(GO:0009095)
0.0 0.5 GO:0000959 mitochondrial RNA metabolic process(GO:0000959)
0.0 0.5 GO:0010022 meristem determinacy(GO:0010022)
0.0 0.5 GO:0072598 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596) protein localization to chloroplast(GO:0072598)
0.0 0.2 GO:1900865 chloroplast RNA modification(GO:1900865)
0.0 0.3 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.0 0.4 GO:0006865 amino acid transport(GO:0006865)
0.0 0.4 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 0.3 GO:0051667 chloroplast relocation(GO:0009902) chloroplast localization(GO:0019750) plastid localization(GO:0051644) establishment of plastid localization(GO:0051667)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 9.8 GO:0009538 photosystem I reaction center(GO:0009538)
0.9 3.6 GO:0070505 pollen coat(GO:0070505)
0.8 4.1 GO:0009897 external side of plasma membrane(GO:0009897)
0.7 17.0 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.4 4.8 GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1)(GO:0045261)
0.4 1.2 GO:0016323 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.4 2.0 GO:0005960 glycine cleavage complex(GO:0005960)
0.4 5.2 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.3 3.5 GO:0042555 MCM complex(GO:0042555)
0.3 1.2 GO:0031353 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.3 9.2 GO:0009543 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.3 2.4 GO:0098553 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.3 2.9 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.3 1.8 GO:0030893 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.2 1.2 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.2 34.6 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.2 3.0 GO:0005880 nuclear microtubule(GO:0005880)
0.2 0.9 GO:0000812 Swr1 complex(GO:0000812)
0.2 1.3 GO:0005884 actin filament(GO:0005884)
0.2 2.4 GO:0009986 cell surface(GO:0009986)
0.2 2.3 GO:0048500 signal recognition particle(GO:0048500)
0.1 3.3 GO:0016324 apical plasma membrane(GO:0016324)
0.1 0.4 GO:0070847 core mediator complex(GO:0070847)
0.1 1.2 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 5.1 GO:0010319 stromule(GO:0010319)
0.1 48.0 GO:0009579 thylakoid(GO:0009579)
0.1 0.3 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.1 1.6 GO:0009508 plastid chromosome(GO:0009508)
0.1 24.8 GO:0048046 apoplast(GO:0048046)
0.1 0.7 GO:0032153 cell division site(GO:0032153)
0.1 1.5 GO:0042644 chloroplast nucleoid(GO:0042644)
0.1 1.5 GO:0072686 mitotic spindle(GO:0072686)
0.1 0.6 GO:0070652 HAUS complex(GO:0070652)
0.1 0.5 GO:0009360 DNA polymerase III complex(GO:0009360)
0.1 9.5 GO:0031225 anchored component of membrane(GO:0031225)
0.1 0.5 GO:0000796 condensin complex(GO:0000796)
0.1 0.6 GO:0032300 mismatch repair complex(GO:0032300)
0.1 1.0 GO:0005769 early endosome(GO:0005769)
0.1 1.4 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.1 1.1 GO:0000784 nuclear chromosome, telomeric region(GO:0000784)
0.0 0.6 GO:0005720 nuclear heterochromatin(GO:0005720)
0.0 7.6 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.2 GO:0030906 retromer, cargo-selective complex(GO:0030906)
0.0 10.9 GO:0005618 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 0.4 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.0 73.1 GO:0005576 extracellular region(GO:0005576)
0.0 0.5 GO:0031965 nuclear membrane(GO:0031965)
0.0 2.2 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.6 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.7 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 0.5 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 9.5 GO:0009570 chloroplast stroma(GO:0009570)
0.0 0.4 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.5 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 1.1 GO:0030176 integral component of endoplasmic reticulum membrane(GO:0030176)
0.0 1.0 GO:0016607 nuclear speck(GO:0016607)
0.0 0.1 GO:0034518 mRNA cap binding complex(GO:0005845) RNA cap binding complex(GO:0034518)
0.0 1.0 GO:0005874 microtubule(GO:0005874)
0.0 0.2 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.8 5.3 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
1.1 4.2 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
1.0 3.1 GO:0010283 pinoresinol reductase activity(GO:0010283)
1.0 2.9 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.9 3.5 GO:0003862 3-isopropylmalate dehydrogenase activity(GO:0003862)
0.8 3.3 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.8 2.5 GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity(GO:0004742) S-acetyltransferase activity(GO:0016418)
0.8 2.5 GO:0010242 oxygen evolving activity(GO:0010242)
0.8 2.4 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.7 3.4 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.7 2.0 GO:0004375 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.7 2.7 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.7 6.0 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.6 3.9 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.6 1.9 GO:0016672 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor(GO:0016672) glutathione dehydrogenase (ascorbate) activity(GO:0045174)
0.6 3.0 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.5 4.8 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.5 3.2 GO:0045431 flavonol synthase activity(GO:0045431)
0.5 1.9 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.5 1.4 GO:0035671 enone reductase activity(GO:0035671)
0.5 4.1 GO:0009922 fatty acid elongase activity(GO:0009922)
0.4 2.7 GO:0051723 protein methylesterase activity(GO:0051723)
0.4 12.7 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.4 1.7 GO:0015245 fatty acid transporter activity(GO:0015245)
0.4 1.7 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.4 3.4 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.4 1.2 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.4 1.6 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.4 1.2 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.4 1.2 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.4 1.1 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.4 3.6 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.4 8.8 GO:0004565 beta-galactosidase activity(GO:0004565)
0.3 2.1 GO:0016531 copper chaperone activity(GO:0016531)
0.3 1.4 GO:0004075 biotin carboxylase activity(GO:0004075)
0.3 1.0 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.3 1.3 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.3 1.9 GO:0052654 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.3 2.5 GO:0015210 pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210)
0.3 3.2 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.3 1.9 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.3 6.9 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.3 1.2 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.3 0.9 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.3 0.9 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.3 8.3 GO:0008266 poly(U) RNA binding(GO:0008266)
0.3 2.4 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.3 8.0 GO:0008810 cellulase activity(GO:0008810)
0.3 2.1 GO:0008441 3'(2'),5'-bisphosphate nucleotidase activity(GO:0008441)
0.3 3.9 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.3 1.6 GO:0031177 phosphopantetheine binding(GO:0031177)
0.3 2.4 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.3 1.1 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.3 1.3 GO:0010313 phytochrome binding(GO:0010313)
0.2 2.0 GO:0004003 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.2 3.4 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.2 1.2 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.2 2.1 GO:0015038 peptide disulfide oxidoreductase activity(GO:0015037) glutathione disulfide oxidoreductase activity(GO:0015038)
0.2 12.2 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.2 1.5 GO:0004340 glucokinase activity(GO:0004340) glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.2 5.8 GO:0008378 galactosyltransferase activity(GO:0008378)
0.2 1.3 GO:0016774 phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.2 0.7 GO:0045181 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.2 0.9 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.2 1.6 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.2 1.4 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.2 0.9 GO:0004049 anthranilate synthase activity(GO:0004049)
0.2 1.5 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.2 1.7 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.2 1.7 GO:0009378 four-way junction helicase activity(GO:0009378)
0.2 3.3 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.2 0.5 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.2 10.3 GO:0004650 polygalacturonase activity(GO:0004650)
0.2 1.1 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.2 0.6 GO:0000035 acyl binding(GO:0000035)
0.1 0.9 GO:0004096 catalase activity(GO:0004096)
0.1 1.7 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.1 2.0 GO:0016872 intramolecular lyase activity(GO:0016872)
0.1 1.1 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.1 14.4 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.1 4.2 GO:0008171 O-methyltransferase activity(GO:0008171)
0.1 2.9 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.1 0.5 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.1 1.4 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.1 5.1 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 2.3 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 1.3 GO:0008725 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.1 2.4 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.9 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.1 2.2 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.1 2.0 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.1 1.0 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.1 0.6 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 0.4 GO:0016882 cyclo-ligase activity(GO:0016882)
0.1 1.5 GO:0047631 ADP-ribose diphosphatase activity(GO:0047631)
0.1 1.5 GO:0003688 DNA replication origin binding(GO:0003688)
0.1 0.5 GO:0070704 sterol desaturase activity(GO:0070704)
0.1 5.9 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.1 3.7 GO:0045735 nutrient reservoir activity(GO:0045735)
0.1 1.0 GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor(GO:0016682)
0.1 11.3 GO:0009055 electron carrier activity(GO:0009055)
0.1 0.4 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.1 0.6 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.1 1.7 GO:0034061 DNA polymerase activity(GO:0034061)
0.1 1.5 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.1 0.8 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.1 2.8 GO:0018024 histone-lysine N-methyltransferase activity(GO:0018024)
0.1 0.4 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.1 0.6 GO:0051011 microtubule minus-end binding(GO:0051011)
0.1 1.5 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.1 0.6 GO:0004084 branched-chain-amino-acid transaminase activity(GO:0004084)
0.1 0.6 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.1 0.8 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 1.1 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.1 0.6 GO:0042887 amide transmembrane transporter activity(GO:0042887)
0.1 0.5 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 0.5 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.1 1.6 GO:0016776 phosphotransferase activity, phosphate group as acceptor(GO:0016776)
0.1 5.9 GO:0016209 antioxidant activity(GO:0016209)
0.1 0.7 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.1 0.8 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.1 1.8 GO:0005179 hormone activity(GO:0005179)
0.1 0.7 GO:1990939 ATP-dependent microtubule motor activity(GO:1990939)
0.1 3.2 GO:0004180 carboxypeptidase activity(GO:0004180)
0.0 1.0 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.9 GO:0030599 pectinesterase activity(GO:0030599)
0.0 0.8 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.0 1.7 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 1.0 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 1.5 GO:0016881 acid-amino acid ligase activity(GO:0016881)
0.0 0.4 GO:0019238 cyclohydrolase activity(GO:0019238)
0.0 0.6 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.0 0.6 GO:0070628 proteasome binding(GO:0070628)
0.0 0.2 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.0 0.6 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 2.0 GO:0004683 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 5.1 GO:0005507 copper ion binding(GO:0005507)
0.0 0.1 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.0 0.6 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.2 GO:0005471 ATP:ADP antiporter activity(GO:0005471)
0.0 0.5 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 2.0 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.0 1.6 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.1 GO:0003785 actin monomer binding(GO:0003785)
0.0 0.3 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.0 0.9 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.1 GO:0036456 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.0 1.2 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 3.2 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 0.1 GO:0017050 D-erythro-sphingosine kinase activity(GO:0017050)
0.0 0.1 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.0 0.4 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.3 GO:0051184 cofactor transporter activity(GO:0051184)
0.0 0.4 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.0 0.2 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.0 0.4 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 0.2 GO:0004499 N,N-dimethylaniline monooxygenase activity(GO:0004499)
0.0 0.8 GO:0043621 protein self-association(GO:0043621)
0.0 0.4 GO:0016879 ligase activity, forming carbon-nitrogen bonds(GO:0016879)
0.0 0.3 GO:0051119 sugar transmembrane transporter activity(GO:0051119)
0.0 0.1 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.0 0.7 GO:0003777 microtubule motor activity(GO:0003777)
0.0 0.2 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.2 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.8 PID AP1 PATHWAY AP-1 transcription factor network
0.4 1.7 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.1 1.8 PID E2F PATHWAY E2F transcription factor network
0.1 1.0 PID CMYB PATHWAY C-MYB transcription factor network
0.1 0.7 PID FANCONI PATHWAY Fanconi anemia pathway
0.0 0.1 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 3.5 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.4 2.1 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.4 1.2 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.4 1.8 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.3 1.3 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.2 1.6 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.2 1.2 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.1 0.4 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.1 1.1 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.6 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.1 0.5 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.1 0.4 REACTOME GENERIC TRANSCRIPTION PATHWAY Genes involved in Generic Transcription Pathway
0.0 0.6 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production