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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G62470

Z-value: 0.69

Transcription factors associated with AT5G62470

Gene Symbol Gene ID Gene Info
AT5G62470
AT5G62470 myb domain protein 96

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
MYB96arTal_v1_Chr5_-_25081141_250811410.384.5e-02Click!

Activity profile of AT5G62470 motif

Sorted Z-values of AT5G62470 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_+_4488476 1.56 AT5G13930.1
TT4
Chalcone and stilbene synthase family protein
Chr1_-_1349478 1.33 AT1G04800.1
AT1G04800
glycine-rich protein
Chr1_-_22317070 1.20 AT1G60590.1
AT1G60590
Pectin lyase-like superfamily protein
Chr3_-_7796310 1.19 AT3G22120.1
AT3G22120.2
CWLP
cell wall-plasma membrane linker protein
Chr1_+_3157501 1.15 AT1G09750.1
AT1G09750
Eukaryotic aspartyl protease family protein
Chr1_+_27452748 1.14 AT1G72970.1
AT1G72970.2
HTH
Glucose-methanol-choline (GMC) oxidoreductase family protein
Chr1_-_575085 1.09 AT1G02660.1
AT1G02660
alpha/beta-Hydrolases superfamily protein
Chr2_-_17648945 1.09 AT2G42380.1
AT2G42380.4
AT2G42380.3
AT2G42380.2
AT2G42380.5
BZIP34
Basic-leucine zipper (bZIP) transcription factor family protein
Chr2_+_8940833 1.08 AT2G20750.2
AT2G20750.1
EXPB1
expansin B1
Chr1_-_4026733 1.07 AT1G11925.1
AT1G11925
Stigma-specific Stig1 family protein
Chr2_+_12805667 1.00 AT2G30010.2
AT2G30010.1
TBL45
TRICHOME BIREFRINGENCE-LIKE 45
Chr1_-_5858446 0.97 AT1G17140.1
AT1G17140.2
ICR1
interactor of constitutive active rops 1
Chr1_+_418726 0.95 AT1G02205.4
AT1G02205.3
AT1G02205.5
AT1G02205.1
CER1
Fatty acid hydroxylase superfamily
Chr1_-_1257893 0.91 AT1G04580.1
AO4
aldehyde oxidase 4
Chr3_-_15617149 0.91 AT3G43720.2
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_20191604 0.91 AT5G49690.1
AT5G49690
UDP-Glycosyltransferase superfamily protein
Chr5_+_6833564 0.91 AT5G20250.2
AT5G20250.1
AT5G20250.4
AT5G20250.3
DIN10
Raffinose synthase family protein
Chr3_-_15617309 0.90 AT3G43720.1
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_779424 0.90 AT5G03260.1
LAC11
laccase 11
Chr2_+_7209108 0.86 AT2G16630.1
AT2G16630
Pollen Ole e 1 allergen and extensin family protein
Chr3_-_8290164 0.84 AT3G23230.1
TDR1
Integrase-type DNA-binding superfamily protein
Chr5_+_91786 0.84 AT5G01225.1
AT5G01225
josephin-like protein
Chr4_-_15022445 0.83 AT4G30850.2
AT4G30850.1
HHP2
heptahelical transmembrane protein2
Chr4_+_12660687 0.80 AT4G24510.1
CER2
HXXXD-type acyl-transferase family protein
Chr1_+_6886867 0.79 AT1G19850.2
MP
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein
Chr1_+_6886669 0.79 AT1G19850.1
MP
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein
Chr3_-_18559326 0.79 AT3G50060.1
MYB77
myb domain protein 77
Chr2_-_16860779 0.77 AT2G40370.1
LAC5
laccase 5
Chr3_-_3494653 0.75 AT3G11150.2
AT3G11150.1
AT3G11150
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr3_-_2664834 0.75 AT3G08770.2
AT3G08770.1
LTP6
lipid transfer protein 6
Chr1_-_473160 0.74 AT1G02360.1
AT1G02360.2
AT1G02360.3
AT1G02360
Chitinase family protein
Chr4_+_14894073 0.73 AT4G30470.1
AT4G30470
NAD(P)-binding Rossmann-fold superfamily protein
Chr5_+_19046339 0.72 AT5G46910.1
AT5G46910.2
AT5G46910
Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Chr1_-_29643535 0.72 AT1G78850.1
AT1G78850
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Chr2_-_17161293 0.71 AT2G41170.2
AT2G41170.1
AT2G41170.3
AT2G41170
F-box family protein
Chr3_+_21261046 0.71 AT3G57450.1
AT3G57450
hypothetical protein
Chr4_-_810574 0.69 AT4G01870.1
AT4G01870.2
AT4G01870
tolB protein-like protein
Chr2_-_15560755 0.68 AT2G37040.1
PAL1
PHE ammonia lyase 1
Chr4_+_16394600 0.68 AT4G34250.1
KCS16
3-ketoacyl-CoA synthase 16
Chr1_+_418416 0.67 AT1G02205.2
CER1
Fatty acid hydroxylase superfamily
Chr2_-_16359943 0.65 AT2G39200.1
MLO12
Seven transmembrane MLO family protein
Chr1_+_21502905 0.65 AT1G58070.1
AT1G58070
WEB family protein
Chr5_-_24987811 0.64 AT5G62210.1
AT5G62210
Embryo-specific protein 3, (ATS3)
Chr5_+_579744 0.64 AT5G02580.1
AT5G02580.3
AT5G02580.2
AT5G02580
argininosuccinate lyase
Chr5_+_18584676 0.64 AT5G45810.1
CIPK19
CBL-interacting protein kinase 19
Chr1_+_17918207 0.63 AT1G48480.1
RKL1
receptor-like kinase 1
Chr3_+_258879 0.63 AT3G01700.1
AGP11
arabinogalactan protein 11
Chr5_-_26096114 0.63 AT5G65300.1
AT5G65300
hypothetical protein
Chr4_+_929869 0.62 AT4G02100.1
AT4G02100
Heat shock protein DnaJ with tetratricopeptide repeat-containing protein
Chr1_-_30186716 0.61 AT1G80280.1
AT1G80280
alpha/beta-Hydrolases superfamily protein
Chr4_-_9749000 0.61 AT4G17483.5
AT4G17483.4
AT4G17483.3
AT4G17483.2
AT4G17483.1
AT4G17483
alpha/beta-Hydrolases superfamily protein
Chr4_+_18291218 0.61 AT4G39330.1
AT4G39330.2
CAD9
cinnamyl alcohol dehydrogenase 9
Chr2_-_15955752 0.61 AT2G38110.1
GPAT6
glycerol-3-phosphate acyltransferase 6
Chr2_+_3618058 0.60 AT2G08986.1
AT2G08986
hypothetical protein
Chr5_-_6842946 0.60 AT5G20270.1
HHP1
heptahelical transmembrane protein1
Chr1_+_3284073 0.60 AT1G10060.5
AT1G10060.4
AT1G10060.6
AT1G10060.7
AT1G10060.1
AT1G10060.2
BCAT-1
branched-chain amino acid transaminase 1
Chr4_+_1374160 0.59 AT4G03100.1
AT4G03100
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
Chr1_-_6932815 0.57 AT1G19970.1
AT1G19970.2
AT1G19970
ER lumen protein retaining receptor family protein
Chr2_+_16130290 0.57 AT2G38540.1
LP1
lipid transfer protein 1
Chr5_+_17585523 0.55 AT5G43760.1
KCS20
3-ketoacyl-CoA synthase 20
Chr5_-_18747406 0.54 AT5G46240.1
KAT1
1
Chr5_-_8910063 0.53 AT5G25590.1
AT5G25590
DNA ligase (DUF630 and DUF632)
Chr4_-_18080083 0.53 AT4G38710.2
AT4G38710.1
AT4G38710
glycine-rich protein
Chr3_-_20903080 0.53 AT3G56370.1
AT3G56370
Leucine-rich repeat protein kinase family protein
Chr3_-_11400332 0.53 AT3G29590.1
AT5MAT
HXXXD-type acyl-transferase family protein
Chr5_-_358962 0.52 AT5G01910.2
AT5G01910.1
AT5G01910
myelin transcription factor
Chr5_-_3517035 0.52 AT5G11070.1
AT5G11070
hypothetical protein
Chr2_+_13987669 0.51 AT2G32960.1
PFA-DSP2
Phosphotyrosine protein phosphatases superfamily protein
Chr3_+_5264001 0.51 AT3G15540.1
IAA19
indole-3-acetic acid inducible 19
Chr2_-_14149769 0.51 AT2G33385.1
AT2G33385.4
AT2G33385.2
AT2G33385.3
arpc2b
actin-related protein C2B
Chr5_-_20506354 0.50 AT5G50360.1
AT5G50360
von willebrand factor A domain protein
Chr4_-_18160158 0.50 AT4G38950.2
AT4G38950.1
AT4G38950.3
AT4G38950
ATP binding microtubule motor family protein
Chr3_+_23384988 0.50 AT3G63300.1
AT3G63300.2
FKD1
FORKED 1
Chr1_-_27831536 0.50 AT1G74000.1
SS3
strictosidine synthase 3
Chr1_-_4892332 0.49 AT1G14330.1
AT1G14330
Galactose oxidase/kelch repeat superfamily protein
Chr4_+_10366044 0.49 AT4G18910.1
AT4G18910.2
NIP1%3B2
NOD26-like intrinsic protein 1;2
Chr4_+_15993957 0.49 AT4G33160.2
AT4G33160.1
AT4G33160
F-box family protein
Chr5_+_17130186 0.48 AT5G42720.1
AT5G42720
Glycosyl hydrolase family 17 protein
Chr1_-_28189765 0.48 AT1G75090.1
AT1G75090
DNA glycosylase superfamily protein
Chr4_-_18158873 0.48 AT4G38950.4
AT4G38950.5
AT4G38950
ATP binding microtubule motor family protein
Chr2_-_15137012 0.47 AT2G36050.1
OFP15
ovate family protein 15
Chr4_-_17181261 0.47 AT4G36360.2
BGAL3
beta-galactosidase 3
Chr4_-_17181466 0.47 AT4G36360.1
BGAL3
beta-galactosidase 3
Chr4_+_8634508 0.47 AT4G15120.1
AT4G15120
VQ motif-containing protein
Chr5_+_3127828 0.47 AT5G10010.1
AT5G10010
myosin-H heavy protein
Chr5_-_21805794 0.46 AT5G53710.2
AT5G53710.1
AT5G53710
hypothetical protein
Chr3_+_6105908 0.45 AT3G17840.1
RLK902
receptor-like kinase 902
Chr4_+_17540490 0.45 AT4G37260.1
MYB73
myb domain protein 73
Chr1_-_26324946 0.44 AT1G69890.1
AT1G69890
actin cross-linking protein (DUF569)
Chr2_-_11066184 0.44 AT2G25940.1
ALPHA-VPE
alpha-vacuolar processing enzyme
Chr3_+_19996177 0.43 AT3G54000.1
AT3G54000.2
AT3G54000
TIP41-like protein
Chr1_-_2135703 0.43 AT1G06950.1
TIC110
translocon at the inner envelope membrane of chloroplasts 110
Chr2_+_17704741 0.43 AT2G42520.1
AT2G42520.2
AT2G42520
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr2_-_16432751 0.43 AT2G39350.1
ABCG1
ABC-2 type transporter family protein
Chr1_-_17983377 0.42 AT1G48630.1
RACK1B_AT
receptor for activated C kinase 1B
Chr5_-_18010542 0.42 AT5G44635.2
AT5G44635.1
MCM6
minichromosome maintenance (MCM2/3/5) family protein
Chr1_+_23911024 0.41 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
Chr5_+_3185734 0.41 AT5G10160.1
AT5G10160
Thioesterase superfamily protein
Chr1_-_7007717 0.40 AT1G20220.1
AT1G20220
Alba DNA/RNA-binding protein
Chr3_+_907384 0.40 AT3G03680.1
AT3G03680
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Chr5_+_26236964 0.40 AT5G65640.1
AT5G65640.2
bHLH093
beta HLH protein 93
Chr3_-_19629204 0.39 AT3G52930.1
FBA8
Aldolase superfamily protein
Chr5_-_21589255 0.39 AT5G53210.1
AT5G53210.2
SPCH
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr2_-_15725022 0.39 AT2G37450.2
AT2G37450.3
AT2G37450.1
UMAMIT13
nodulin MtN21 /EamA-like transporter family protein
Chr1_+_21181585 0.39 AT1G56540.1
AT1G56540.2
AT1G56540
Disease resistance protein (TIR-NBS-LRR class) family
Chr5_-_23367063 0.39 AT5G57685.1
GDU3
glutamine dumper 3
Chr1_+_28098464 0.38 AT1G74790.1
AT1G74790
catalytics
Chr4_+_13165475 0.38 AT4G25920.1
AT4G25920
hypothetical protein (DUF295)
Chr3_-_23018509 0.38 AT3G62170.1
VGDH2
VANGUARD-like protein
Chr1_+_17065858 0.38 AT1G45130.2
BGAL5
beta-galactosidase 5
Chr1_-_22057268 0.37 AT1G59910.1
AT1G59910
Actin-binding FH2 (formin homology 2) family protein
Chr2_+_17705198 0.37 AT2G42520.3
AT2G42520
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_+_27484240 0.37 AT1G73080.1
PEPR1
PEP1 receptor 1
Chr4_-_12339967 0.37 AT4G23690.1
DIR6
Disease resistance-responsive (dirigent-like protein) family protein
Chr4_+_14259141 0.37 AT4G28900.1
AT4G28900

Chr3_-_15775873 0.36 AT3G43960.1
AT3G43960
Cysteine proteinases superfamily protein
Chr2_-_9906032 0.36 AT2G23290.1
MYB70
myb domain protein 70
Chr1_-_24792068 0.36 AT1G66460.1
AT1G66460.3
AT1G66460.2
AT1G66460
Protein kinase superfamily protein
Chr3_+_19996533 0.36 AT3G54000.3
AT3G54000
TIP41-like protein
Chr4_-_10185383 0.36 AT4G18430.1
RABA1e
RAB GTPase homolog A1E
Chr1_+_5977323 0.35 AT1G17420.1
LOX3
lipoxygenase 3
Chr1_-_3272110 0.35 AT1G10020.1
AT1G10020
formin-like protein (DUF1005)
Chr3_+_2612175 0.35 AT3G08600.1
AT3G08600
transmembrane protein, putative (DUF1191)
Chr5_-_23124513 0.35 AT5G57120.1
AT5G57120.2
AT5G57120
nucleolar/coiled-body phosphoprotein
Chr1_+_5042535 0.35 AT1G14685.4
AT1G14685.2
AT1G14685.3
BPC2
basic pentacysteine 2
Chr5_+_4710563 0.35 AT5G14610.1
AT5G14610.3
AT5G14610.4
AT5G14610.5
AT5G14610.6
AT5G14610.2
AT5G14610
DEAD box RNA helicase family protein
Chr3_+_6710349 0.35 AT3G19370.3
AT3G19370.1
AT3G19370
filament-like protein (DUF869)
Chr1_+_17065111 0.35 AT1G45130.1
BGAL5
beta-galactosidase 5
Chr4_-_7111813 0.34 AT4G11820.1
HMGS
hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase
Chr5_+_3854964 0.34 AT5G11950.1
LOG8
Putative lysine decarboxylase family protein
Chr5_+_20420951 0.34 AT5G50170.1
AT5G50170
C2 calcium/lipid-binding and GRAM domain containing protein
Chr5_+_3854388 0.34 AT5G11950.3
LOG8
Putative lysine decarboxylase family protein
Chr5_-_20036205 0.34 AT5G49420.1
AT5G49420
MADS-box transcription factor family protein
Chr5_+_3854770 0.34 AT5G11950.2
AT5G11950.4
LOG8
Putative lysine decarboxylase family protein
Chr1_+_541236 0.33 AT1G02570.1
AT1G02570
transmembrane protein
Chr4_-_7112103 0.33 AT4G11820.2
HMGS
hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase
Chr1_-_22871298 0.33 AT1G61890.3
AT1G61890.1
AT1G61890.2
AT1G61890
MATE efflux family protein
Chr5_+_17984527 0.33 AT5G44585.1
AT5G44585
hypothetical protein
Chr1_+_5042240 0.33 AT1G14685.1
BPC2
basic pentacysteine 2
Chr4_-_7112480 0.32 AT4G11820.3
HMGS
hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase
Chr1_+_3284537 0.32 AT1G10060.3
BCAT-1
branched-chain amino acid transaminase 1
Chr1_+_16263805 0.32 AT1G43160.1
RAP2.6
related to AP2 6
Chr4_-_16192687 0.32 AT4G33760.2
AT4G33760
tRNA synthetase class II (D, K and N) family protein
Chr3_+_17905725 0.31 AT3G48350.2
AT3G48350.1
CEP3
Cysteine proteinases superfamily protein
Chr3_-_723784 0.31 AT3G03130.1
AT3G03130
lisH domain-like protein
Chr2_-_8317905 0.31 AT2G19170.2
SLP3
subtilisin-like serine protease 3
Chr3_+_7031171 0.31 AT3G20150.1
AT3G20150.2
AT3G20150
Kinesin motor family protein
Chr4_-_2388105 0.31 AT4G04700.1
CPK27
calcium-dependent protein kinase 27
Chr1_+_17686990 0.31 AT1G47970.1
AT1G47970
nucleolin
Chr5_-_7265851 0.30 AT5G21280.2
AT5G21280.1
AT5G21280
hydroxyproline-rich glycoprotein family protein
Chr2_-_8318596 0.30 AT2G19170.1
SLP3
subtilisin-like serine protease 3
Chr2_-_13390778 0.30 AT2G31400.2
AT2G31400.1
GUN1
s uncoupled 1
Chr4_-_15291539 0.30 AT4G31550.1
AT4G31550.3
WRKY11
WRKY DNA-binding protein 11
Chr2_-_15084559 0.30 AT2G35930.1
PUB23
plant U-box 23
Chr5_-_8497578 0.30 AT5G24760.1
AT5G24760.2
AT5G24760.4
AT5G24760
GroES-like zinc-binding dehydrogenase family protein
Chr3_+_10140200 0.30 AT3G27400.2
AT3G27400.1
AT3G27400
Pectin lyase-like superfamily protein
Chr3_+_18249663 0.30 AT3G49220.2
AT3G49220.3
AT3G49220.1
AT3G49220
Plant invertase/pectin methylesterase inhibitor superfamily
Chr1_+_27179458 0.29 AT1G72210.1
AT1G72210.2
AT1G72210
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr4_+_7480556 0.29 AT4G12690.2
AT4G12690.1
AT4G12690
DUF868 family protein (DUF868)
Chr4_-_15291934 0.29 AT4G31550.2
WRKY11
WRKY DNA-binding protein 11
Chr2_+_10177776 0.29 AT2G23910.2
AT2G23910.3
AT2G23910.1
AT2G23910.4
AT2G23910
NAD(P)-binding Rossmann-fold superfamily protein
Chr3_+_634465 0.29 AT3G02880.1
AT3G02880
Leucine-rich repeat protein kinase family protein
Chr2_-_18706266 0.29 AT2G45400.4
AT2G45400.2
AT2G45400.1
BEN1
NAD(P)-binding Rossmann-fold superfamily protein
Chr5_+_7529292 0.29 AT5G22640.3
AT5G22640.1
AT5G22640.2
emb1211
MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein
Chr1_+_25809298 0.29 AT1G68725.1
AGP19
arabinogalactan protein 19
Chr5_+_19206829 0.28 AT5G47330.1
AT5G47330
alpha/beta-Hydrolases superfamily protein
Chr3_+_15818511 0.28 AT3G44050.1
AT3G44050
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr2_+_9065154 0.28 AT2G21150.1
XCT
XAP5 family protein
Chr1_+_23727794 0.28 AT1G63930.1
ROH1
from the Czech 'roh' meaning 'corner'
Chr5_-_19473838 0.28 AT5G48050.1
AT5G48050
Copia-like polyprotein/retrotransposon
Chr3_-_2388675 0.27 AT3G07470.2
AT3G07470.1
AT3G07470.3
AT3G07470
transmembrane protein, putative (Protein of unknown function, DUF538)
Chr2_-_5051613 0.27 AT2G12462.1
AT2G12462
sterile alpha motif (SAM) domain protein
Chr4_-_16193318 0.27 AT4G33760.1
AT4G33760
tRNA synthetase class II (D, K and N) family protein
Chr5_-_18457303 0.26 AT5G45530.1
AT5G45530
transmembrane protein, putative (DUF594)
Chr3_+_2379128 0.26 AT3G07430.1
YLMG1-1
YGGT family protein
Chr3_+_6710720 0.26 AT3G19370.2
AT3G19370
filament-like protein (DUF869)
Chr3_+_20286070 0.26 AT3G54800.1
AT3G54800.2
AT3G54800
Pleckstrin homology (PH) and lipid-binding START domains-containing protein
Chr5_-_2489408 0.26 AT5G07800.1
AT5G07800
Flavin-binding monooxygenase family protein
Chr2_+_17728479 0.26 AT2G42580.1
TTL3
tetratricopetide-repeat thioredoxin-like 3
Chr5_-_6547127 0.25 AT5G19410.1
AT5G19410.2
ABCG23
ABC-2 type transporter family protein
Chr1_-_18061257 0.25 AT1G48830.2
AT1G48830.1
AT1G48830
Ribosomal protein S7e family protein
Chr1_-_22391165 0.25 AT1G60810.2
AT1G60810.1
ACLA-2
ATP-citrate lyase A-2
Chr4_+_13830827 0.25 AT4G27720.1
AT4G27720
Major facilitator superfamily protein
Chr4_-_15312987 0.25 AT4G31590.1
CSLC5
Cellulose-synthase-like C5
Chr4_+_11211244 0.25 AT4G20960.1
PyrD
Cytidine/deoxycytidylate deaminase family protein
Chr5_+_26421610 0.25 AT5G66070.1
AT5G66070.3
AT5G66070.4
AT5G66070.2
AT5G66070.5
AT5G66070
RING/U-box superfamily protein
Chr3_+_19042858 0.25 AT3G51300.1
ROP1
RHO-related protein from plants 1
Chr2_-_8736577 0.25 AT2G20250.3
AT2G20250.1
AT2G20250.2
AT2G20250
hypothetical protein
Chr2_-_9767 0.24 AT2G01023.1
AT2G01023
hypothetical protein
Chr5_-_3300151 0.24 AT5G10480.2
AT5G10480.3
AT5G10480.1
PAS2
Protein-tyrosine phosphatase-like, PTPLA
Chr2_-_19211021 0.24 AT2G46750.1
GulLO2
D-arabinono-1,4-lactone oxidase family protein
Chr4_-_9214825 0.24 AT4G16280.2
AT4G16280.4
FCA
flowering time control protein FCA
Chr1_+_17466535 0.23 AT1G47560.1
SEC3B
exocyst complex component sec3B
Chr4_-_9214412 0.23 AT4G16280.3
FCA
flowering time control protein FCA
Chr4_+_16000015 0.23 AT4G33180.1
AT4G33180.2
AT4G33180
alpha/beta-Hydrolases superfamily protein
Chr2_-_13995749 0.23 AT2G32970.1
AT2G32970.4
AT2G32970.2
AT2G32970
G1/S-specific cyclin-E protein
Chr4_-_9214981 0.23 AT4G16280.1
FCA
flowering time control protein FCA
Chr5_-_1887031 0.23 AT5G06230.2
AT5G06230.3
AT5G06230.1
TBL9
TRICHOME BIREFRINGENCE-LIKE 9
Chr5_-_8358546 0.22 AT5G24470.1
PRR5
two-component response regulator-like protein
Chr1_+_3461635 0.22 AT1G10510.1
emb2004
RNI-like superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G62470

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.8 GO:0043447 alkane biosynthetic process(GO:0043447)
0.2 1.0 GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.2 1.2 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.2 1.6 GO:0009942 longitudinal axis specification(GO:0009942)
0.1 0.7 GO:0019336 phenol-containing compound catabolic process(GO:0019336)
0.1 0.9 GO:0006552 leucine catabolic process(GO:0006552)
0.1 0.5 GO:0051329 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.1 0.4 GO:0009270 response to humidity(GO:0009270)
0.1 0.3 GO:0090143 nucleoid organization(GO:0090143)
0.1 0.4 GO:0090030 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.1 0.9 GO:0080086 stamen filament development(GO:0080086)
0.1 0.4 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.1 1.6 GO:0031540 regulation of anthocyanin biosynthetic process(GO:0031540)
0.1 0.4 GO:0009806 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.1 0.4 GO:0006624 vacuolar protein processing(GO:0006624)
0.1 0.2 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.1 0.4 GO:0072344 rescue of stalled ribosome(GO:0072344)
0.1 1.0 GO:0030497 fatty acid elongation(GO:0030497)
0.1 0.3 GO:0035864 response to potassium ion(GO:0035864)
0.1 0.2 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.1 0.3 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.1 0.4 GO:1902969 mitotic DNA replication(GO:1902969)
0.1 1.7 GO:0042335 cuticle development(GO:0042335)
0.1 1.1 GO:0006949 syncytium formation(GO:0006949)
0.1 0.7 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.1 0.2 GO:0015853 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.1 0.5 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.0 0.4 GO:0045487 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.0 0.7 GO:0006030 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.0 0.1 GO:0008153 para-aminobenzoic acid biosynthetic process(GO:0008153)
0.0 0.1 GO:0050878 regulation of body fluid levels(GO:0050878) multicellular organismal water homeostasis(GO:0050891) positive regulation of lateral root development(GO:1901333)
0.0 0.2 GO:0000012 single strand break repair(GO:0000012)
0.0 0.9 GO:0046688 response to copper ion(GO:0046688)
0.0 0.2 GO:0051601 exocyst localization(GO:0051601)
0.0 0.5 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.5 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.0 0.1 GO:1901071 glucosamine-containing compound metabolic process(GO:1901071)
0.0 1.0 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.3 GO:0015689 molybdate ion transport(GO:0015689)
0.0 0.3 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.0 0.9 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 0.9 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.0 0.4 GO:1901348 positive regulation of secondary cell wall biogenesis(GO:1901348)
0.0 0.2 GO:0006598 polyamine catabolic process(GO:0006598)
0.0 0.2 GO:0019079 viral genome replication(GO:0019079)
0.0 0.5 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.0 0.2 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.0 0.1 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.0 0.6 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 0.4 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.0 0.7 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 0.4 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.0 1.7 GO:0009744 response to sucrose(GO:0009744)
0.0 0.5 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0 0.2 GO:0030834 regulation of actin filament depolymerization(GO:0030834)
0.0 1.5 GO:0009808 lignin metabolic process(GO:0009808)
0.0 0.4 GO:0010025 wax biosynthetic process(GO:0010025) wax metabolic process(GO:0010166)
0.0 0.1 GO:0080120 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.0 1.6 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.4 GO:0031048 chromatin silencing by small RNA(GO:0031048)
0.0 0.2 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.0 0.1 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.0 0.1 GO:0051096 maintenance of DNA repeat elements(GO:0043570) regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.0 0.2 GO:0006771 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.0 0.1 GO:0043489 RNA stabilization(GO:0043489)
0.0 0.1 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.0 0.3 GO:0006085 acetyl-CoA biosynthetic process(GO:0006085)
0.0 0.0 GO:0010432 bract development(GO:0010432)
0.0 0.1 GO:0010255 glucose mediated signaling pathway(GO:0010255)
0.0 0.0 GO:0045002 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
0.0 0.1 GO:0019430 removal of superoxide radicals(GO:0019430) cellular response to oxygen radical(GO:0071450) cellular response to superoxide(GO:0071451)
0.0 1.7 GO:0080167 response to karrikin(GO:0080167)
0.0 0.1 GO:1900036 positive regulation of cellular response to heat(GO:1900036)
0.0 1.0 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.6 GO:0009682 induced systemic resistance(GO:0009682)
0.0 0.9 GO:0042542 response to hydrogen peroxide(GO:0042542)
0.0 0.4 GO:0006284 base-excision repair(GO:0006284)
0.0 1.2 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.0 0.1 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.0 0.2 GO:0019852 L-ascorbic acid metabolic process(GO:0019852) L-ascorbic acid biosynthetic process(GO:0019853)
0.0 0.7 GO:0009817 defense response to fungus, incompatible interaction(GO:0009817)
0.0 0.3 GO:0008285 negative regulation of cell proliferation(GO:0008285)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 GO:0031897 Tic complex(GO:0031897)
0.1 0.2 GO:0035371 microtubule plus-end(GO:0035371)
0.0 1.0 GO:0090404 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.0 0.3 GO:0009346 citrate lyase complex(GO:0009346)
0.0 0.4 GO:0042555 MCM complex(GO:0042555)
0.0 0.4 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.0 0.2 GO:0031429 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.0 0.5 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 0.2 GO:0016363 nuclear matrix(GO:0016363)
0.0 0.6 GO:0005871 kinesin complex(GO:0005871)
0.0 0.1 GO:0034425 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.0 2.9 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.0 1.7 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 0.1 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.0 0.1 GO:0030870 Mre11 complex(GO:0030870)
0.0 0.1 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.0 0.2 GO:0045177 apical part of cell(GO:0045177)
0.0 0.5 GO:0090406 pollen tube(GO:0090406)
0.0 0.4 GO:0005764 lysosome(GO:0005764)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.6 GO:0071771 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.3 1.0 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.3 1.1 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.2 0.5 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.2 0.7 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.2 0.9 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.2 0.9 GO:0018488 aryl-aldehyde oxidase activity(GO:0018488) indole-3-acetaldehyde oxidase activity(GO:0050302)
0.1 0.4 GO:0032947 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.1 0.4 GO:1990518 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.1 0.4 GO:0001130 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.1 0.9 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 0.3 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.1 0.4 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.1 1.7 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.6 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.7 GO:0009922 fatty acid elongase activity(GO:0009922)
0.1 0.2 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.1 0.5 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.1 0.5 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.1 0.5 GO:0046923 ER retention sequence binding(GO:0046923)
0.1 0.2 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
0.1 0.2 GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.1 1.3 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 0.2 GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.0 0.2 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.0 0.4 GO:0001653 peptide receptor activity(GO:0001653) guanylate cyclase activity(GO:0004383)
0.0 0.5 GO:0008725 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.0 0.3 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.0 0.2 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.0 0.7 GO:0102337 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.0 0.3 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.0 0.5 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.0 0.4 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.0 0.2 GO:0046592 polyamine oxidase activity(GO:0046592)
0.0 0.7 GO:0004568 chitinase activity(GO:0004568)
0.0 0.1 GO:0032135 DNA insertion or deletion binding(GO:0032135)
0.0 0.7 GO:0010427 abscisic acid binding(GO:0010427)
0.0 0.1 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.0 0.4 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.0 0.3 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.0 0.2 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.0 0.1 GO:0015002 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.0 0.2 GO:0017048 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546) Rho GTPase binding(GO:0017048)
0.0 1.2 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.2 GO:0070905 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.0 0.2 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.0 0.7 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 0.1 GO:0004075 biotin carboxylase activity(GO:0004075)
0.0 0.2 GO:0004834 tryptophan synthase activity(GO:0004834)
0.0 0.3 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 1.3 GO:0003777 microtubule motor activity(GO:0003777)
0.0 0.2 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.0 0.1 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.0 0.1 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 0.2 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.0 1.2 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.1 GO:0015288 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.0 0.1 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.0 0.3 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)
0.0 0.5 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 1.0 GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds(GO:0016799)
0.0 1.0 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 0.4 GO:0008810 cellulase activity(GO:0008810)
0.0 0.1 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.0 0.6 GO:0016790 thiolester hydrolase activity(GO:0016790)
0.0 1.6 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 0.3 GO:0004499 N,N-dimethylaniline monooxygenase activity(GO:0004499)
0.0 1.2 GO:0038023 signaling receptor activity(GO:0038023)
0.0 2.5 GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups(GO:0016747)
0.0 0.6 GO:0010857 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 0.1 GO:0030291 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.0 0.1 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.6 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.1 0.2 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms
0.0 0.2 PID MTOR 4PATHWAY mTOR signaling pathway
0.0 0.2 PID PLK1 PATHWAY PLK1 signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.1 1.6 REACTOME DEVELOPMENTAL BIOLOGY Genes involved in Developmental Biology
0.1 0.4 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA