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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G60130

Z-value: 1.69

Transcription factors associated with AT5G60130

Gene Symbol Gene ID Gene Info
AT5G60130
AT5G60130 AP2/B3-like transcriptional factor family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT5G60130arTal_v1_Chr5_-_24213386_242133860.442.0e-02Click!

Activity profile of AT5G60130 motif

Sorted Z-values of AT5G60130 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_-_4312103 6.49 AT2G10940.2
AT2G10940.1
AT2G10940
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_9072708 5.69 AT5G25980.2
AT5G25980.1
AT5G25980.3
TGG2
glucoside glucohydrolase 2
Chr5_-_19648362 5.34 AT5G48490.1
AT5G48490
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_+_5505360 5.19 AT3G16240.1
DELTA-TIP
delta tonoplast integral protein
Chr4_-_18098633 4.86 AT4G38770.1
PRP4
proline-rich protein 4
Chr5_-_9082384 4.49 AT5G26000.1
AT5G26000.2
TGG1
thioglucoside glucohydrolase 1
Chr3_+_10255906 4.46 AT3G27690.2
AT3G27690.1
LHCB2.3
photosystem II light harvesting complex protein 2.3
Chr3_+_5681380 4.23 AT3G16670.1
AT3G16670
Pollen Ole e 1 allergen and extensin family protein
Chr2_-_16950705 4.21 AT2G40610.1
EXPA8
expansin A8
Chr1_-_20648891 4.12 AT1G55330.1
AGP21
arabinogalactan protein 21
Chr3_+_5556710 4.02 AT3G16370.1
AT3G16370
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_197974 3.99 AT3G01500.1
CA1
carbonic anhydrase 1
Chr2_+_9844134 3.98 AT2G23130.1
AT2G23130.2
AGP17
arabinogalactan protein 17
Chr3_-_198160 3.97 AT3G01500.2
CA1
carbonic anhydrase 1
Chr3_-_198664 3.96 AT3G01500.3
CA1
carbonic anhydrase 1
Chr3_-_21523375 3.95 AT3G58120.2
AT3G58120.1
BZIP61
Basic-leucine zipper (bZIP) transcription factor family protein
Chr3_-_197564 3.93 AT3G01500.4
CA1
carbonic anhydrase 1
Chr4_-_10391298 3.89 AT4G18970.1
AT4G18970
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr4_-_10390991 3.86 AT4G18970.2
AT4G18970
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr4_+_18291218 3.70 AT4G39330.1
AT4G39330.2
CAD9
cinnamyl alcohol dehydrogenase 9
Chr2_+_2763449 3.55 AT2G06850.1
AT2G06850.2
XTH4
xyloglucan endotransglucosylase/hydrolase 4
Chr4_-_17777445 3.54 AT4G37800.1
XTH7
xyloglucan endotransglucosylase/hydrolase 7
Chr2_+_8940833 3.47 AT2G20750.2
AT2G20750.1
EXPB1
expansin B1
Chr5_-_15382071 3.44 AT5G38420.1
RBCS2B
Ribulose bisphosphate carboxylase (small chain) family protein
Chr2_+_16130290 3.43 AT2G38540.1
LP1
lipid transfer protein 1
Chr5_+_17760865 3.37 AT5G44130.1
FLA13
FASCICLIN-like arabinogalactan protein 13 precursor
Chr3_-_4008018 3.36 AT3G12610.1
DRT100
Leucine-rich repeat (LRR) family protein
Chr1_+_10375754 3.35 AT1G29670.1
AT1G29670
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_+_17712203 3.34 AT5G44020.1
AT5G44020
HAD superfamily, subfamily IIIB acid phosphatase
Chr1_+_10375599 3.32 AT1G29670.2
AT1G29670
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_8589754 3.28 AT3G23810.1
SAHH2
S-adenosyl-l-homocysteine (SAH) hydrolase 2
Chr1_-_59215 3.27 AT1G01120.1
KCS1
3-ketoacyl-CoA synthase 1
Chr1_-_4090857 3.26 AT1G12090.1
ELP
extensin-like protein
Chr4_-_17606924 3.23 AT4G37450.1
AT4G37450.2
AGP18
arabinogalactan protein 18
Chr4_-_12400231 3.23 AT4G23820.1
AT4G23820
Pectin lyase-like superfamily protein
Chr5_+_18634041 3.20 AT5G45950.1
AT5G45950
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr4_+_12660687 3.19 AT4G24510.1
CER2
HXXXD-type acyl-transferase family protein
Chr4_+_2449434 3.16 AT4G04840.1
MSRB6
methionine sulfoxide reductase B6
Chr5_+_4757856 3.15 AT5G14740.3
AT5G14740.6
AT5G14740.1
AT5G14740.7
AT5G14740.8
AT5G14740.2
AT5G14740.4
AT5G14740.5
CA2
carbonic anhydrase 2
Chr2_-_9428170 3.13 AT2G22170.1
PLAT2
Lipase/lipooxygenase, PLAT/LH2 family protein
Chr5_+_26767599 3.12 AT5G67070.1
RALFL34
ralf-like 34
Chr5_-_4171954 3.08 AT5G13140.1
AT5G13140
Pollen Ole e 1 allergen and extensin family protein
Chr3_+_23345754 3.07 AT3G63200.1
PLP9
PATATIN-like protein 9
Chr1_+_9740508 3.06 AT1G27950.1
LTPG1
glycosylphosphatidylinositol-anchored lipid protein transfer 1
Chr1_+_7252111 3.01 AT1G20850.1
XCP2
xylem cysteine peptidase 2
Chr2_+_1676999 3.00 AT2G04780.2
FLA7
FASCICLIN-like arabinoogalactan 7
Chr1_+_27338034 2.99 AT1G72600.2
AT1G72600.1
AT1G72600
hydroxyproline-rich glycoprotein family protein
Chr1_-_1043887 2.97 AT1G04040.1
AT1G04040
HAD superfamily, subfamily IIIB acid phosphatase
Chr5_+_4758921 2.96 AT5G14740.9
CA2
carbonic anhydrase 2
Chr1_+_20614573 2.95 AT1G55260.1
AT1G55260.2
AT1G55260
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_+_1676717 2.93 AT2G04780.1
FLA7
FASCICLIN-like arabinoogalactan 7
Chr1_-_3880391 2.92 AT1G11545.1
XTH8
xyloglucan endotransglucosylase/hydrolase 8
Chr1_+_7886323 2.92 AT1G22330.1
AT1G22330
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr2_-_12433796 2.90 AT2G28950.1
EXPA6
expansin A6
Chr5_+_152446 2.89 AT5G01370.1
ACI1
ALC-interacting protein 1
Chr1_+_25401514 2.85 AT1G67750.1
AT1G67750
Pectate lyase family protein
Chr4_-_17355891 2.84 AT4G36850.3
AT4G36850.4
AT4G36850.2
AT4G36850.1
AT4G36850
PQ-loop repeat family protein / transmembrane family protein
Chr1_+_17918207 2.83 AT1G48480.1
RKL1
receptor-like kinase 1
Chr3_+_251868 2.81 AT3G01680.1
SEOR1
sieve element occlusion amino-terminus protein
Chr2_-_15789605 2.80 AT2G37640.2
EXP3
Barwin-like endoglucanases superfamily protein
Chr2_-_17827648 2.80 AT2G42840.1
PDF1
protodermal factor 1
Chr1_-_25049424 2.78 AT1G67090.2
RBCS1A
ribulose bisphosphate carboxylase small chain 1A
Chr1_-_25049667 2.78 AT1G67090.1
RBCS1A
ribulose bisphosphate carboxylase small chain 1A
Chr2_-_15790139 2.77 AT2G37640.1
EXP3
Barwin-like endoglucanases superfamily protein
Chr3_-_1136397 2.72 AT3G04290.1
LTL1
Li-tolerant lipase 1
Chr4_+_620691 2.71 AT4G01460.1
AT4G01460.2
AT4G01460
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_+_21009347 2.70 AT5G51720.1
NEET
2 iron, 2 sulfur cluster binding protein
Chr4_+_16397995 2.70 AT4G34260.1
FUC95A
1,2-alpha-L-fucosidase
Chr1_+_418726 2.70 AT1G02205.4
AT1G02205.3
AT1G02205.5
AT1G02205.1
CER1
Fatty acid hydroxylase superfamily
Chr5_+_4944816 2.69 AT5G15230.1
GASA4
GAST1 protein homolog 4
Chr1_-_84864 2.68 AT1G01190.1
AT1G01190.2
CYP78A8
cytochrome P450, family 78, subfamily A, polypeptide 8
Chr3_-_15617149 2.68 AT3G43720.2
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_+_14517393 2.68 AT4G29610.1
AT4G29610
Cytidine/deoxycytidylate deaminase family protein
Chr1_-_21614169 2.68 AT1G58270.1
ZW9
TRAF-like family protein
Chr5_-_779424 2.66 AT5G03260.1
LAC11
laccase 11
Chr3_-_15617309 2.65 AT3G43720.1
LTPG2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_-_3027961 2.65 AT3G09870.1
AT3G09870
SAUR-like auxin-responsive protein family
Chr2_+_1594588 2.62 AT2G04570.1
AT2G04570
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_+_18262290 2.62 AT3G49260.1
AT3G49260.3
AT3G49260.2
AT3G49260.4
iqd21
IQ-domain 21
Chr2_-_15474717 2.62 AT2G36870.2
AT2G36870.1
XTH32
xyloglucan endotransglucosylase/hydrolase 32
Chr1_+_20447157 2.61 AT1G54820.1
AT1G54820.2
AT1G54820.3
AT1G54820.4
AT1G54820
Protein kinase superfamily protein
Chr5_+_1664040 2.60 AT5G05580.2
AT5G05580.1
FAD8
fatty acid desaturase 8
Chr4_-_5779462 2.60 AT4G09010.1
AT4G09010.2
AT4G09010.3
TL29
ascorbate peroxidase 4
Chr2_-_7496292 2.58 AT2G17230.1
EXL5
EXORDIUM like 5
Chr3_-_19595834 2.58 AT3G52870.1
AT3G52870
IQ calmodulin-binding motif family protein
Chr3_-_6882235 2.58 AT3G19820.3
AT3G19820.1
AT3G19820.2
DWF1
cell elongation protein / DWARF1 / DIMINUTO (DIM)
Chr3_-_16448844 2.58 AT3G44990.1
XTH31
xyloglucan endo-transglycosylase-related 8
Chr4_+_13391293 2.56 AT4G26530.2
AT4G26530.1
FBA5
Aldolase superfamily protein
Chr3_+_22973564 2.56 AT3G62030.3
AT3G62030.1
ROC4
rotamase CYP 4
Chr1_-_26711462 2.56 AT1G70830.4
AT1G70830.2
AT1G70830.1
AT1G70830.5
AT1G70830.3
MLP28
MLP-like protein 28
Chr5_-_18026077 2.54 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
Chr5_+_7502427 2.52 AT5G22580.1
AT5G22580
Stress responsive A/B Barrel Domain-containing protein
Chr1_+_6409655 2.51 AT1G18620.3
AT1G18620.1
AT1G18620.4
TRM3
LONGIFOLIA protein
Chr3_+_22973004 2.51 AT3G62030.2
ROC4
rotamase CYP 4
Chr4_+_11663186 2.50 AT4G22010.1
sks4
SKU5 similar 4
Chr1_-_22317070 2.50 AT1G60590.1
AT1G60590
Pectin lyase-like superfamily protein
Chr5_+_4945062 2.49 AT5G15230.2
GASA4
GAST1 protein homolog 4
Chr4_-_16583075 2.49 AT4G34760.1
AT4G34760
SAUR-like auxin-responsive protein family
Chr4_+_13390754 2.49 AT4G26530.3
FBA5
Aldolase superfamily protein
Chr5_-_18371021 2.48 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
Chr5_-_6842946 2.48 AT5G20270.1
HHP1
heptahelical transmembrane protein1
Chr1_-_20719165 2.48 AT1G55490.1
AT1G55490.2
AT1G55490.4
AT1G55490.3
AT1G55490.5
CPN60B
chaperonin 60 beta
Chr4_-_7353117 2.48 AT4G12420.1
AT4G12420.2
SKU5
Cupredoxin superfamily protein
Chr4_-_8307934 2.47 AT4G14440.1
HCD1
3-hydroxyacyl-CoA dehydratase 1
Chr2_+_17592038 2.46 AT2G42220.1
AT2G42220
Rhodanese/Cell cycle control phosphatase superfamily protein
Chr2_-_19563960 2.45 AT2G47750.1
GH3.9
putative indole-3-acetic acid-amido synthetase GH3.9
Chr5_-_25373904 2.44 AT5G63310.1
NDPK2
nucleoside diphosphate kinase 2
Chr2_+_6399621 2.43 AT2G14890.2
AGP9
arabinogalactan protein 9
Chr5_+_5078200 2.43 AT5G15600.1
AT5G15600.2
SP1L4
SPIRAL1-like4
Chr5_-_990630 2.42 AT5G03760.1
ATCSLA09
Nucleotide-diphospho-sugar transferases superfamily protein
Chr3_+_5314817 2.41 AT3G15680.1
AT3G15680.2
AT3G15680
Ran BP2/NZF zinc finger-like superfamily protein
Chr3_-_20903080 2.41 AT3G56370.1
AT3G56370
Leucine-rich repeat protein kinase family protein
Chr2_+_16476198 2.41 AT2G39470.1
AT2G39470.2
AT2G39470.3
PnsL1
PsbP-like protein 2
Chr2_+_14384797 2.40 AT2G34060.1
AT2G34060
Peroxidase superfamily protein
Chr2_+_14427509 2.40 AT2G34170.3
AT2G34170.2
AT2G34170.1
AT2G34170.4
AT2G34170.5
AT2G34170.6
AT2G34170
hypothetical protein (DUF688)
Chr3_+_19845097 2.40 AT3G53530.2
AT3G53530.1
NAKR3
Chloroplast-targeted copper chaperone protein
Chr1_-_26468703 2.39 AT1G70280.1
AT1G70280.2
AT1G70280
NHL domain-containing protein
Chr4_+_14149849 2.37 AT4G28660.1
AT4G28660.2
PSB28
photosystem II reaction center PSB28 protein
Chr3_-_20576249 2.36 AT3G55500.1
EXPA16
expansin A16
Chr3_-_373805 2.35 AT3G02110.1
scpl25
serine carboxypeptidase-like 25
Chr1_-_10473502 2.34 AT1G29910.1
CAB3
chlorophyll A/B binding protein 3
Chr1_-_4530222 2.33 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
Chr4_-_846792 2.32 AT4G01950.1
AT4G01950.2
GPAT3
glycerol-3-phosphate acyltransferase 3
Chr4_+_4886962 2.32 AT4G08040.1
ACS11
1-aminocyclopropane-1-carboxylate synthase 11
Chr4_-_12772438 2.32 AT4G24780.1
AT4G24780.2
AT4G24780
Pectin lyase-like superfamily protein
Chr3_-_6436046 2.32 AT3G18710.1
PUB29
plant U-box 29
Chr4_+_14944129 2.31 AT4G30610.1
BRS1
alpha/beta-Hydrolases superfamily protein
Chr5_+_19825078 2.31 AT5G48900.1
AT5G48900
Pectin lyase-like superfamily protein
Chr3_+_18049571 2.30 AT3G48730.1
GSA2
glutamate-1-semialdehyde 2,1-aminomutase 2
Chr1_-_15607966 2.29 AT1G41830.1
SKS6
SKU5-similar 6
Chr3_-_4042075 2.29 AT3G12710.1
AT3G12710
DNA glycosylase superfamily protein
Chr4_+_16357421 2.28 AT4G34160.1
CYCD3%3B1
CYCLIN D3;1
Chr5_-_20712386 2.28 AT5G50915.4
AT5G50915.2
AT5G50915.1
AT5G50915.3
AT5G50915
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr2_+_6399405 2.27 AT2G14890.1
AGP9
arabinogalactan protein 9
Chr1_+_5058583 2.27 AT1G14700.4
AT1G14700.1
AT1G14700.3
AT1G14700.2
PAP3
purple acid phosphatase 3
Chr4_+_8931617 2.27 AT4G15680.1
AT4G15680
Thioredoxin superfamily protein
Chr4_-_1026179 2.27 AT4G02320.1
AT4G02320
Plant invertase/pectin methylesterase inhibitor superfamily
Chr5_+_22038165 2.26 AT5G54270.1
LHCB3
light-harvesting chlorophyll B-binding protein 3
Chr4_-_7857933 2.26 AT4G13500.1
AT4G13500
transmembrane protein
Chr2_-_1800472 2.25 AT2G05070.1
LHCB2.2
photosystem II light harvesting complex protein 2.2
Chr3_+_4389215 2.24 AT3G13470.1
Cpn60beta2
TCP-1/cpn60 chaperonin family protein
Chr1_-_18405493 2.24 AT1G49730.3
AT1G49730.4
AT1G49730.2
AT1G49730.5
AT1G49730.1
AT1G49730
Protein kinase superfamily protein
Chr2_-_7727404 2.24 AT2G17780.2
AT2G17780.4
AT2G17780.5
AT2G17780.8
AT2G17780.10
AT2G17780.9
AT2G17780.1
AT2G17780.6
AT2G17780.3
AT2G17780.7
MCA2
PLAC8 family protein
Chr4_-_17181261 2.24 AT4G36360.2
BGAL3
beta-galactosidase 3
Chr1_-_26515188 2.23 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
Chr4_-_17181466 2.22 AT4G36360.1
BGAL3
beta-galactosidase 3
Chr2_+_11723398 2.22 AT2G27402.2
AT2G27402
plastid transcriptionally active protein
Chr1_-_1063809 2.22 AT1G04110.1
SDD1
Subtilase family protein
Chr1_-_8075037 2.22 AT1G22810.1
AT1G22810
Integrase-type DNA-binding superfamily protein
Chr1_-_28581315 2.22 AT1G76160.1
sks5
SKU5 similar 5
Chr1_+_6410947 2.21 AT1G18620.5
TRM3
LONGIFOLIA protein
Chr1_-_21626402 2.20 AT1G58290.1
HEMA1
Glutamyl-tRNA reductase family protein
Chr1_-_19978048 2.20 AT1G53520.1
FAP3
Chalcone-flavanone isomerase family protein
Chr1_+_23911024 2.20 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
Chr4_-_1268612 2.20 AT4G02850.1
AT4G02850
phenazine biosynthesis PhzC/PhzF family protein
Chr3_-_19541284 2.19 AT3G52720.4
AT3G52720.2
ACA1
alpha carbonic anhydrase 1
Chr3_-_2216483 2.19 AT3G07010.1
AT3G07010.2
AT3G07010
Pectin lyase-like superfamily protein
Chr5_+_3889906 2.19 AT5G12050.1
AT5G12050
rho GTPase-activating protein
Chr2_+_12014412 2.19 AT2G28190.1
CSD2
copper/zinc superoxide dismutase 2
Chr5_+_20945676 2.19 AT5G51560.1
AT5G51560
Leucine-rich repeat protein kinase family protein
Chr2_-_12785037 2.19 AT2G29980.2
FAD3
fatty acid desaturase 3
Chr1_+_16127353 2.17 AT1G42970.1
GAPB
glyceraldehyde-3-phosphate dehydrogenase B subunit
Chr1_+_20963686 2.17 AT1G56050.1
AT1G56050
GTP-binding protein-like protein
Chr4_-_69884 2.17 AT4G00165.2
AT4G00165.1
AT4G00165
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_+_10323636 2.16 AT1G29520.1
AT1G29520
AWPM-19-like family protein
Chr1_+_6410033 2.16 AT1G18620.2
TRM3
LONGIFOLIA protein
Chr5_-_24990331 2.16 AT5G62220.1
GT18
glycosyltransferase 18
Chr4_-_7587099 2.16 AT4G12970.1
STOMAGEN
stomagen
Chr3_-_19542160 2.16 AT3G52720.3
AT3G52720.1
ACA1
alpha carbonic anhydrase 1
Chr3_+_20780175 2.16 AT3G55990.1
ESK1
trichome birefringence-like protein (DUF828)
Chr2_-_12785190 2.16 AT2G29980.1
FAD3
fatty acid desaturase 3
Chr2_-_19617681 2.16 AT2G47930.1
AGP26
arabinogalactan protein 26
Chr4_-_12822497 2.16 AT4G24930.1
AT4G24930
thylakoid lumenal 17.9 kDa protein, chloroplast
Chr1_+_9259750 2.15 AT1G26770.2
EXPA10
expansin A10
Chr1_+_898480 2.15 AT1G03600.1
PSB27
photosystem II family protein
Chr1_-_21057577 2.14 AT1G56240.1
PP2-B13
phloem protein 2-B13
Chr1_-_3518035 2.14 AT1G10640.1
AT1G10640
Pectin lyase-like superfamily protein
Chr3_+_19613078 2.14 AT3G52900.1
AT3G52900
RAB6-interacting golgin (DUF662)
Chr1_+_3530353 2.14 AT1G10657.4
AT1G10657.2
AT1G10657.3
AT1G10657.1
AT1G10657
transmembrane protein
Chr1_+_1231452 2.13 AT1G04520.1
PDLP2
plasmodesmata-located protein 2
Chr2_-_11727654 2.13 AT2G27420.1
AT2G27420
Cysteine proteinases superfamily protein
Chr2_+_14733975 2.12 AT2G34925.1
CLE42
CLAVATA3/ESR-RELATED 42
Chr5_+_5237970 2.12 AT5G16030.1
AT5G16030.4
AT5G16030.2
AT5G16030.3
AT5G16030
mental retardation GTPase activating protein
Chr4_-_15059846 2.12 AT4G30950.1
FAD6
fatty acid desaturase 6
Chr4_+_16708552 2.12 AT4G35100.2
PIP3
plasma membrane intrinsic protein 3
Chr4_+_16708361 2.11 AT4G35100.1
PIP3
plasma membrane intrinsic protein 3
Chr2_-_12173951 2.11 AT2G28470.2
AT2G28470.4
AT2G28470.1
AT2G28470.3
BGAL8
beta-galactosidase 8
Chr5_+_834859 2.11 AT5G03390.1
AT5G03390
hypothetical protein (DUF295)
Chr5_-_5310951 2.11 AT5G16250.1
AT5G16250
transmembrane protein
Chr2_+_19145218 2.11 AT2G46630.1
AT2G46630
serine/arginine repetitive matrix protein
Chr1_+_9259432 2.11 AT1G26770.1
EXPA10
expansin A10
Chr3_+_2564153 2.11 AT3G08030.2
AT3G08030
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
Chr4_+_5740219 2.11 AT4G08950.1
EXO
Phosphate-responsive 1 family protein
Chr4_+_14304921 2.11 AT4G29020.2
AT4G29020.1
AT4G29020
glycine-rich protein
Chr1_+_12026936 2.11 AT1G33170.1
AT1G33170
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_-_8707885 2.10 AT5G25190.1
ESE3
Integrase-type DNA-binding superfamily protein
Chr1_+_26141726 2.10 AT1G69530.2
AT1G69530.1
AT1G69530.3
AT1G69530.5
AT1G69530.4
EXPA1
expansin A1
Chr3_-_6980523 2.10 AT3G20015.1
AT3G20015
Eukaryotic aspartyl protease family protein
Chr4_-_13943732 2.10 AT4G28050.1
TET7
tetraspanin7
Chr1_-_1307973 2.09 AT1G04680.1
AT1G04680
Pectin lyase-like superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G60130

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.7 10.0 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
1.4 17.7 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
1.3 25.5 GO:0006949 syncytium formation(GO:0006949)
1.2 3.5 GO:0015840 urea transport(GO:0015840)
1.1 10.0 GO:0051513 regulation of monopolar cell growth(GO:0051513)
1.0 2.9 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.9 5.5 GO:0043447 alkane biosynthetic process(GO:0043447)
0.9 2.8 GO:0009234 menaquinone metabolic process(GO:0009233) menaquinone biosynthetic process(GO:0009234)
0.9 2.7 GO:0071258 cellular response to gravity(GO:0071258)
0.9 4.3 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.8 2.5 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.8 2.4 GO:0035017 cuticle pattern formation(GO:0035017)
0.8 2.4 GO:0042407 cristae formation(GO:0042407)
0.7 2.9 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.7 8.7 GO:0032544 plastid translation(GO:0032544)
0.7 0.7 GO:0031022 nuclear migration along microfilament(GO:0031022)
0.7 2.0 GO:0071457 cellular response to ozone(GO:0071457)
0.7 2.0 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
0.7 5.3 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.6 1.9 GO:0080051 cutin transport(GO:0080051)
0.6 7.1 GO:1901959 positive regulation of cutin biosynthetic process(GO:1901959)
0.6 5.1 GO:0010065 primary meristem tissue development(GO:0010065)
0.6 3.8 GO:0009650 UV protection(GO:0009650)
0.6 1.8 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.6 2.4 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.6 3.0 GO:0071260 cellular response to mechanical stimulus(GO:0071260)
0.6 1.8 GO:0071461 cellular response to redox state(GO:0071461)
0.6 3.6 GO:0010444 guard mother cell differentiation(GO:0010444)
0.6 3.5 GO:0090057 root radial pattern formation(GO:0090057)
0.6 3.5 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
0.6 2.9 GO:0080175 phragmoplast microtubule organization(GO:0080175)
0.6 10.1 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.6 1.7 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.6 2.8 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.5 1.6 GO:0010080 regulation of floral meristem growth(GO:0010080)
0.5 8.0 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.5 3.7 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.5 5.9 GO:0010206 photosystem II repair(GO:0010206)
0.5 2.1 GO:0080003 thalianol metabolic process(GO:0080003)
0.5 1.6 GO:0009202 deoxyribonucleoside triphosphate biosynthetic process(GO:0009202)
0.5 0.5 GO:0010451 floral meristem growth(GO:0010451)
0.5 7.7 GO:0048564 photosystem I assembly(GO:0048564)
0.5 2.6 GO:0019742 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.5 1.5 GO:0048873 tissue homeostasis(GO:0001894) homeostasis of number of meristem cells(GO:0007639) homeostasis of number of cells(GO:0048872) homeostasis of number of cells within a tissue(GO:0048873)
0.5 0.5 GO:0050878 regulation of body fluid levels(GO:0050878) multicellular organismal water homeostasis(GO:0050891)
0.5 1.5 GO:1900033 regulation of trichome patterning(GO:1900032) negative regulation of trichome patterning(GO:1900033)
0.5 3.0 GO:0006216 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.5 2.5 GO:0009647 skotomorphogenesis(GO:0009647)
0.5 2.0 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.5 2.0 GO:0015675 nickel cation transport(GO:0015675)
0.5 2.0 GO:0070509 calcium ion import(GO:0070509)
0.5 2.5 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.5 3.0 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.5 2.0 GO:0000719 photoreactive repair(GO:0000719)
0.5 2.4 GO:0060631 regulation of meiosis I(GO:0060631)
0.5 1.9 GO:0010480 microsporocyte differentiation(GO:0010480)
0.5 1.0 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.5 13.3 GO:0042335 cuticle development(GO:0042335)
0.5 1.4 GO:0032196 transposition(GO:0032196)
0.5 1.4 GO:0048478 replication fork protection(GO:0048478)
0.5 8.3 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.5 2.3 GO:0000080 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.5 1.4 GO:0048629 trichome patterning(GO:0048629)
0.5 2.3 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.5 1.4 GO:0010541 acropetal auxin transport(GO:0010541)
0.5 2.3 GO:0010450 inflorescence meristem growth(GO:0010450)
0.4 0.9 GO:1901465 positive regulation of tetrapyrrole biosynthetic process(GO:1901465)
0.4 1.3 GO:0009558 embryo sac cellularization(GO:0009558)
0.4 3.0 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.4 2.1 GO:0010226 response to lithium ion(GO:0010226)
0.4 2.1 GO:0090030 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.4 8.4 GO:0010025 wax biosynthetic process(GO:0010025)
0.4 2.5 GO:0046345 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.4 1.2 GO:0010220 positive regulation of vernalization response(GO:0010220)
0.4 3.6 GO:0010052 guard cell differentiation(GO:0010052)
0.4 1.2 GO:0033206 meiotic cytokinesis(GO:0033206)
0.4 1.6 GO:0071480 cellular response to gamma radiation(GO:0071480)
0.4 1.2 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.4 2.0 GO:0050482 icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
0.4 1.2 GO:0010045 response to nickel cation(GO:0010045)
0.4 2.4 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.4 1.2 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.4 26.3 GO:0007018 microtubule-based movement(GO:0007018)
0.4 1.5 GO:0006024 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.4 2.3 GO:0009120 deoxyribonucleoside metabolic process(GO:0009120) thymidine metabolic process(GO:0046104) pyrimidine deoxyribonucleoside metabolic process(GO:0046125)
0.4 2.3 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.4 1.5 GO:0006426 glycyl-tRNA aminoacylation(GO:0006426)
0.4 6.4 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.4 1.5 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.4 1.1 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
0.4 0.4 GO:0010235 guard mother cell cytokinesis(GO:0010235)
0.4 1.1 GO:0034755 iron ion transmembrane transport(GO:0034755)
0.4 0.4 GO:0045597 positive regulation of cell differentiation(GO:0045597)
0.4 0.7 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.4 0.4 GO:0010434 bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.4 0.4 GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.4 1.8 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.4 1.8 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.4 0.4 GO:0046949 fatty-acyl-CoA biosynthetic process(GO:0046949)
0.4 1.4 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.4 2.5 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.4 2.1 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.4 1.1 GO:0070922 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.4 0.4 GO:0046717 acid secretion(GO:0046717)
0.4 1.8 GO:0046713 borate transport(GO:0046713)
0.4 0.7 GO:0090603 sieve element differentiation(GO:0090603)
0.3 0.7 GO:0009915 phloem sucrose loading(GO:0009915)
0.3 1.0 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.3 4.5 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.3 1.4 GO:1904961 quiescent center organization(GO:1904961)
0.3 6.2 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.3 1.0 GO:0030104 water homeostasis(GO:0030104)
0.3 2.4 GO:0080117 secondary growth(GO:0080117)
0.3 3.4 GO:0019676 ammonia assimilation cycle(GO:0019676)
0.3 0.3 GO:0046166 glyceraldehyde-3-phosphate biosynthetic process(GO:0046166)
0.3 3.4 GO:0046083 adenine metabolic process(GO:0046083) adenine biosynthetic process(GO:0046084)
0.3 4.0 GO:0007143 female meiotic division(GO:0007143)
0.3 1.0 GO:2000029 regulation of proanthocyanidin biosynthetic process(GO:2000029)
0.3 4.0 GO:0015977 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.3 9.8 GO:0006284 base-excision repair(GO:0006284)
0.3 3.2 GO:0010088 phloem development(GO:0010088)
0.3 0.6 GO:0048871 multicellular organismal homeostasis(GO:0048871)
0.3 1.6 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.3 1.3 GO:0090207 regulation of triglyceride metabolic process(GO:0090207)
0.3 3.4 GO:0010047 fruit dehiscence(GO:0010047)
0.3 0.9 GO:0090143 nucleoid organization(GO:0090143)
0.3 1.2 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.3 1.5 GO:0030497 fatty acid elongation(GO:0030497)
0.3 0.6 GO:1902932 positive regulation of alcohol biosynthetic process(GO:1902932)
0.3 0.6 GO:1990937 xylan acetylation(GO:1990937)
0.3 5.0 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.3 0.9 GO:0010184 cytokinin transport(GO:0010184)
0.3 0.9 GO:0045857 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
0.3 1.2 GO:0051098 regulation of binding(GO:0051098)
0.3 2.9 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.3 1.7 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.3 1.4 GO:0007142 male meiosis II(GO:0007142)
0.3 2.8 GO:0015976 carbon utilization(GO:0015976)
0.3 0.9 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.3 23.6 GO:0045490 pectin catabolic process(GO:0045490)
0.3 1.1 GO:0007140 male meiosis(GO:0007140)
0.3 2.8 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.3 0.3 GO:0050992 dimethylallyl diphosphate biosynthetic process(GO:0050992) dimethylallyl diphosphate metabolic process(GO:0050993)
0.3 1.1 GO:0006788 heme oxidation(GO:0006788)
0.3 2.4 GO:0071490 cellular response to far red light(GO:0071490)
0.3 6.5 GO:0030855 epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855)
0.3 4.0 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.3 3.0 GO:1901348 positive regulation of secondary cell wall biogenesis(GO:1901348)
0.3 1.9 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.3 1.3 GO:0006106 fumarate metabolic process(GO:0006106)
0.3 0.8 GO:0006148 inosine catabolic process(GO:0006148) inosine metabolic process(GO:0046102)
0.3 0.5 GO:0000730 DNA recombinase assembly(GO:0000730)
0.3 1.0 GO:0018023 peptidyl-lysine trimethylation(GO:0018023)
0.3 1.8 GO:0046348 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.3 5.4 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.3 2.8 GO:0006094 gluconeogenesis(GO:0006094)
0.3 1.0 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.3 0.8 GO:0043953 protein transport by the Tat complex(GO:0043953)
0.3 1.0 GO:1990428 miRNA transport(GO:1990428)
0.3 1.3 GO:0009807 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.3 1.0 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.2 12.2 GO:0009809 lignin biosynthetic process(GO:0009809)
0.2 3.7 GO:0009645 response to low light intensity stimulus(GO:0009645)
0.2 1.0 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.2 0.2 GO:0035337 fatty-acyl-CoA metabolic process(GO:0035337)
0.2 1.5 GO:0031507 heterochromatin assembly(GO:0031507)
0.2 1.5 GO:0097502 mannosylation(GO:0097502)
0.2 0.7 GO:0009143 nucleoside triphosphate catabolic process(GO:0009143)
0.2 0.5 GO:2000736 regulation of stem cell population maintenance(GO:2000036) regulation of stem cell differentiation(GO:2000736)
0.2 1.7 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.2 0.7 GO:0006808 regulation of nitrogen utilization(GO:0006808)
0.2 0.7 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.2 1.0 GO:0098740 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.2 1.2 GO:0006346 methylation-dependent chromatin silencing(GO:0006346)
0.2 3.1 GO:0044030 regulation of DNA methylation(GO:0044030)
0.2 0.7 GO:1990532 stress response to nickel ion(GO:1990532)
0.2 0.5 GO:0006449 regulation of translational termination(GO:0006449)
0.2 0.5 GO:0042539 hypotonic salinity response(GO:0042539)
0.2 7.6 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.2 6.5 GO:0016132 phytosteroid biosynthetic process(GO:0016129) brassinosteroid biosynthetic process(GO:0016132)
0.2 0.5 GO:2000067 regulation of root morphogenesis(GO:2000067)
0.2 2.0 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.2 0.7 GO:0045003 double-strand break repair via synthesis-dependent strand annealing(GO:0045003)
0.2 2.0 GO:0009635 response to herbicide(GO:0009635)
0.2 0.2 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.2 0.9 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.2 0.7 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.2 0.9 GO:0099636 cytoplasmic streaming(GO:0099636)
0.2 6.3 GO:0030705 cytoskeleton-dependent intracellular transport(GO:0030705)
0.2 0.9 GO:0043279 response to caffeine(GO:0031000) response to alkaloid(GO:0043279) cellular response to alkaloid(GO:0071312) cellular response to caffeine(GO:0071313) cellular response to purine-containing compound(GO:0071415) negative regulation of cellular response to caffeine(GO:1901181)
0.2 9.4 GO:0019759 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.2 8.1 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.2 0.4 GO:0034767 positive regulation of transporter activity(GO:0032411) positive regulation of ion transmembrane transporter activity(GO:0032414) positive regulation of ion transmembrane transport(GO:0034767) positive regulation of anion channel activity(GO:1901529) positive regulation of anion transport(GO:1903793) positive regulation of anion transmembrane transport(GO:1903961)
0.2 0.4 GO:0043479 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.2 0.8 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.2 0.6 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.2 1.2 GO:0010569 regulation of double-strand break repair via homologous recombination(GO:0010569)
0.2 0.2 GO:0098586 cellular response to virus(GO:0098586)
0.2 1.6 GO:0007020 microtubule nucleation(GO:0007020)
0.2 1.2 GO:0051952 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.2 12.2 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.2 0.6 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.2 4.9 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.2 2.0 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.2 2.4 GO:0010588 cotyledon vascular tissue pattern formation(GO:0010588)
0.2 1.8 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.2 7.0 GO:0045492 xylan biosynthetic process(GO:0045492)
0.2 1.2 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.2 0.8 GO:0009113 purine nucleobase biosynthetic process(GO:0009113)
0.2 1.8 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.2 1.2 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.2 0.4 GO:0034969 histone arginine methylation(GO:0034969)
0.2 1.4 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.2 1.0 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.2 0.8 GO:0071492 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.2 4.5 GO:0009944 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.2 0.9 GO:0010338 leaf formation(GO:0010338)
0.2 0.4 GO:0051307 meiotic chromosome separation(GO:0051307)
0.2 1.1 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.2 1.7 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.2 2.6 GO:0044070 regulation of anion transport(GO:0044070)
0.2 3.9 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.2 0.7 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.2 0.5 GO:0051639 actin filament network formation(GO:0051639)
0.2 7.0 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.2 2.8 GO:0009085 lysine biosynthetic process(GO:0009085) lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.2 0.3 GO:0014074 response to purine-containing compound(GO:0014074)
0.2 1.4 GO:0010031 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.2 4.2 GO:0009959 negative gravitropism(GO:0009959)
0.2 1.4 GO:0070193 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.2 2.1 GO:0080086 stamen filament development(GO:0080086)
0.2 0.5 GO:0033567 DNA replication, Okazaki fragment processing(GO:0033567)
0.2 0.3 GO:0022898 regulation of transmembrane transporter activity(GO:0022898) regulation of ion transmembrane transporter activity(GO:0032412)
0.2 1.5 GO:0070919 production of siRNA involved in chromatin silencing by small RNA(GO:0070919)
0.2 1.3 GO:0051510 regulation of unidimensional cell growth(GO:0051510)
0.2 0.8 GO:0006107 oxaloacetate metabolic process(GO:0006107)
0.2 0.7 GO:0070206 protein trimerization(GO:0070206)
0.2 1.3 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.2 0.3 GO:0048359 mucilage metabolic process involved in seed coat development(GO:0048359)
0.2 0.5 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.2 0.5 GO:0033194 response to hydroperoxide(GO:0033194)
0.2 0.6 GO:0061087 positive regulation of histone H3-K27 methylation(GO:0061087)
0.2 0.6 GO:0019427 acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.2 0.6 GO:0052746 inositol phosphorylation(GO:0052746)
0.2 0.5 GO:0046499 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.2 8.8 GO:0032956 regulation of actin cytoskeleton organization(GO:0032956)
0.2 1.4 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.2 0.3 GO:0010216 maintenance of DNA methylation(GO:0010216)
0.2 2.4 GO:0015743 malate transport(GO:0015743)
0.2 0.6 GO:0032465 regulation of cytokinesis(GO:0032465)
0.2 1.8 GO:0042793 transcription from plastid promoter(GO:0042793)
0.2 0.6 GO:0051754 meiotic sister chromatid cohesion, centromeric(GO:0051754) centromeric sister chromatid cohesion(GO:0070601)
0.2 0.3 GO:0018065 protein-cofactor linkage(GO:0018065)
0.2 0.3 GO:0042060 wound healing(GO:0042060)
0.2 0.6 GO:0006687 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.1 16.9 GO:0015979 photosynthesis(GO:0015979)
0.1 0.9 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.1 0.4 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.1 4.0 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.1 1.3 GO:0033320 UDP-D-xylose metabolic process(GO:0033319) UDP-D-xylose biosynthetic process(GO:0033320)
0.1 0.1 GO:0071366 coumarin metabolic process(GO:0009804) cellular response to indolebutyric acid stimulus(GO:0071366)
0.1 2.9 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.1 2.1 GO:0010584 pollen exine formation(GO:0010584)
0.1 0.3 GO:0008295 spermidine biosynthetic process(GO:0008295)
0.1 0.6 GO:0000023 maltose metabolic process(GO:0000023)
0.1 0.7 GO:0005980 glycogen catabolic process(GO:0005980)
0.1 0.3 GO:0072526 pyridine-containing compound catabolic process(GO:0072526)
0.1 1.4 GO:0036065 fucosylation(GO:0036065)
0.1 0.6 GO:0001887 selenium compound metabolic process(GO:0001887)
0.1 0.7 GO:0018206 peptidyl-methionine modification(GO:0018206)
0.1 0.4 GO:0010424 DNA methylation on cytosine within a CG sequence(GO:0010424)
0.1 1.6 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.1 1.8 GO:0030522 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.1 0.8 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.1 2.0 GO:0000105 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.1 0.7 GO:0042724 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.1 0.7 GO:0007043 cell-cell junction assembly(GO:0007043) cell junction assembly(GO:0034329)
0.1 1.9 GO:0010274 hydrotropism(GO:0010274)
0.1 0.7 GO:0043489 RNA stabilization(GO:0043489)
0.1 0.5 GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287)
0.1 1.4 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.1 1.8 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.1 2.1 GO:0008356 asymmetric cell division(GO:0008356)
0.1 0.5 GO:0016120 carotene biosynthetic process(GO:0016120)
0.1 2.6 GO:0010492 maintenance of shoot apical meristem identity(GO:0010492)
0.1 5.5 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.1 0.5 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.1 1.1 GO:0036297 interstrand cross-link repair(GO:0036297)
0.1 0.6 GO:0010155 regulation of proton transport(GO:0010155)
0.1 0.5 GO:0046622 positive regulation of organ growth(GO:0046622)
0.1 0.1 GO:0031333 negative regulation of protein complex assembly(GO:0031333)
0.1 2.3 GO:0006817 phosphate ion transport(GO:0006817)
0.1 0.4 GO:0006297 nucleotide-excision repair, DNA gap filling(GO:0006297)
0.1 1.6 GO:0010214 seed coat development(GO:0010214)
0.1 0.1 GO:0071731 response to nitric oxide(GO:0071731)
0.1 0.9 GO:0051294 establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
0.1 0.1 GO:0046135 pyrimidine ribonucleoside catabolic process(GO:0046133) pyrimidine nucleoside catabolic process(GO:0046135)
0.1 0.7 GO:2000038 regulation of stomatal complex development(GO:2000038)
0.1 3.1 GO:0010075 regulation of meristem growth(GO:0010075)
0.1 2.1 GO:0010227 floral organ abscission(GO:0010227)
0.1 1.2 GO:0030488 tRNA methylation(GO:0030488)
0.1 1.7 GO:0000373 Group II intron splicing(GO:0000373)
0.1 1.7 GO:0009299 mRNA transcription(GO:0009299)
0.1 0.3 GO:0006102 isocitrate metabolic process(GO:0006102)
0.1 1.0 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.1 1.0 GO:0043410 positive regulation of MAPK cascade(GO:0043410)
0.1 0.6 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.1 0.4 GO:0071323 cellular response to chitin(GO:0071323)
0.1 0.8 GO:0072337 modified amino acid transport(GO:0072337)
0.1 1.1 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.1 0.6 GO:0009554 megasporogenesis(GO:0009554)
0.1 0.9 GO:0000966 RNA 5'-end processing(GO:0000966)
0.1 0.5 GO:0010587 miRNA catabolic process(GO:0010587)
0.1 0.4 GO:0033499 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.1 1.5 GO:0042044 water transport(GO:0006833) fluid transport(GO:0042044)
0.1 2.6 GO:0006306 DNA alkylation(GO:0006305) DNA methylation(GO:0006306)
0.1 1.1 GO:0001709 cell fate determination(GO:0001709)
0.1 0.6 GO:0010449 root meristem growth(GO:0010449)
0.1 0.4 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.1 0.4 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.1 0.5 GO:0035627 ceramide transport(GO:0035627)
0.1 0.6 GO:0006013 mannose metabolic process(GO:0006013)
0.1 0.2 GO:0080140 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.1 0.3 GO:0034486 hexose transport(GO:0008645) fructose transport(GO:0015755) vacuolar transmembrane transport(GO:0034486)
0.1 0.6 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.1 1.7 GO:0042593 glucose homeostasis(GO:0042593)
0.1 0.7 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.1 1.2 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.1 0.5 GO:0010165 response to X-ray(GO:0010165)
0.1 0.5 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.1 0.8 GO:0085029 pollen wall assembly(GO:0010208) cellular component assembly involved in morphogenesis(GO:0010927) extracellular matrix assembly(GO:0085029)
0.1 1.1 GO:0046520 sphingoid biosynthetic process(GO:0046520)
0.1 0.2 GO:0051103 DNA ligation involved in DNA repair(GO:0051103)
0.1 0.2 GO:0046785 microtubule polymerization(GO:0046785)
0.1 0.8 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.1 0.3 GO:1903321 negative regulation of protein modification by small protein conjugation or removal(GO:1903321)
0.1 6.9 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.1 1.0 GO:0009955 adaxial/abaxial pattern specification(GO:0009955)
0.1 0.6 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.1 0.1 GO:0071493 cellular response to UV-B(GO:0071493)
0.1 0.3 GO:0046373 L-arabinose metabolic process(GO:0046373)
0.1 0.5 GO:0042138 meiotic DNA double-strand break formation(GO:0042138)
0.1 2.0 GO:0007131 reciprocal meiotic recombination(GO:0007131) reciprocal DNA recombination(GO:0035825)
0.1 0.7 GO:0032508 DNA geometric change(GO:0032392) DNA duplex unwinding(GO:0032508)
0.1 0.4 GO:0015940 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.1 0.2 GO:2000779 regulation of double-strand break repair(GO:2000779)
0.1 0.5 GO:0010267 production of ta-siRNAs involved in RNA interference(GO:0010267)
0.1 1.1 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.1 0.4 GO:0010731 protein glutathionylation(GO:0010731)
0.1 0.6 GO:0044000 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.1 0.1 GO:0007188 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.1 0.5 GO:0043928 exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay(GO:0043928)
0.1 0.9 GO:0006620 posttranslational protein targeting to membrane(GO:0006620)
0.1 0.2 GO:0071836 nectar secretion(GO:0071836)
0.1 0.3 GO:0030308 negative regulation of cell growth(GO:0030308)
0.1 0.2 GO:0007266 Rho protein signal transduction(GO:0007266)
0.1 1.5 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.1 0.5 GO:0033674 positive regulation of kinase activity(GO:0033674)
0.1 0.5 GO:0006821 chloride transport(GO:0006821)
0.1 1.7 GO:0080092 regulation of cell development(GO:0060284) regulation of pollen tube growth(GO:0080092)
0.1 0.1 GO:0034765 regulation of transmembrane transport(GO:0034762) regulation of ion transmembrane transport(GO:0034765)
0.1 0.3 GO:0007052 mitotic spindle organization(GO:0007052)
0.1 0.9 GO:0018126 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.1 0.5 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.1 0.1 GO:0090342 regulation of cell aging(GO:0090342)
0.1 1.4 GO:0009686 gibberellin metabolic process(GO:0009685) gibberellin biosynthetic process(GO:0009686)
0.1 0.9 GO:0005983 starch catabolic process(GO:0005983)
0.1 0.4 GO:0097577 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.1 0.3 GO:0010390 histone monoubiquitination(GO:0010390)
0.1 3.0 GO:0007267 cell-cell signaling(GO:0007267)
0.1 0.3 GO:0048830 adventitious root development(GO:0048830)
0.1 2.6 GO:0006414 translational elongation(GO:0006414)
0.1 0.6 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.1 1.8 GO:0006730 one-carbon metabolic process(GO:0006730)
0.1 0.5 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.1 0.3 GO:0070982 L-asparagine biosynthetic process(GO:0070981) L-asparagine metabolic process(GO:0070982)
0.1 0.3 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.1 0.6 GO:0006265 DNA topological change(GO:0006265)
0.1 0.4 GO:0033314 mitotic DNA replication checkpoint(GO:0033314)
0.1 0.7 GO:0006415 translational termination(GO:0006415)
0.1 1.0 GO:0045493 xylan catabolic process(GO:0045493)
0.1 0.1 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.1 0.9 GO:0031145 anaphase-promoting complex-dependent catabolic process(GO:0031145)
0.1 0.2 GO:0070828 heterochromatin organization(GO:0070828)
0.1 1.6 GO:0031122 cytoplasmic microtubule organization(GO:0031122)
0.0 0.5 GO:0018202 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 0.4 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.0 0.7 GO:0015936 coenzyme A metabolic process(GO:0015936)
0.0 0.2 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.0 1.0 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.4 GO:0018026 peptidyl-lysine monomethylation(GO:0018026)
0.0 0.9 GO:0035195 gene silencing by miRNA(GO:0035195)
0.0 0.1 GO:0042873 phosphoglycerate transport(GO:0015713) phosphoenolpyruvate transport(GO:0015714) aldonate transport(GO:0042873)
0.0 0.3 GO:0010098 suspensor development(GO:0010098)
0.0 0.3 GO:0009750 response to fructose(GO:0009750)
0.0 1.2 GO:0000028 ribosomal small subunit assembly(GO:0000028)
0.0 0.2 GO:0009304 tRNA transcription(GO:0009304)
0.0 1.2 GO:0006891 intra-Golgi vesicle-mediated transport(GO:0006891)
0.0 0.3 GO:0006376 mRNA splice site selection(GO:0006376)
0.0 0.2 GO:0033386 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.0 1.3 GO:0006661 phosphatidylinositol biosynthetic process(GO:0006661)
0.0 2.1 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.1 GO:0046391 5-phosphoribose 1-diphosphate biosynthetic process(GO:0006015) 5-phosphoribose 1-diphosphate metabolic process(GO:0046391)
0.0 0.5 GO:0045338 farnesyl diphosphate metabolic process(GO:0045338)
0.0 0.4 GO:2000142 regulation of DNA-templated transcription, initiation(GO:2000142)
0.0 0.1 GO:0006430 lysyl-tRNA aminoacylation(GO:0006430)
0.0 0.1 GO:0016094 polyprenol biosynthetic process(GO:0016094)
0.0 0.1 GO:0015739 sialic acid transport(GO:0015739)
0.0 0.1 GO:0043570 maintenance of DNA repeat elements(GO:0043570)
0.0 0.9 GO:0010582 floral meristem determinacy(GO:0010582)
0.0 0.3 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.0 1.6 GO:0006418 tRNA aminoacylation for protein translation(GO:0006418)
0.0 0.0 GO:0055122 response to very low light intensity stimulus(GO:0055122)
0.0 0.9 GO:0009958 positive gravitropism(GO:0009958)
0.0 0.0 GO:0042177 negative regulation of protein catabolic process(GO:0042177)
0.0 0.4 GO:0045839 negative regulation of mitotic nuclear division(GO:0045839)
0.0 0.4 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 1.3 GO:0005985 sucrose metabolic process(GO:0005985)
0.0 0.2 GO:0032958 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) inositol phosphate biosynthetic process(GO:0032958) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.0 0.3 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.0 0.1 GO:0010028 xanthophyll cycle(GO:0010028)
0.0 0.8 GO:0009630 gravitropism(GO:0009630)
0.0 0.2 GO:0007021 tubulin complex assembly(GO:0007021)
0.0 0.2 GO:0071585 detoxification of cadmium ion(GO:0071585)
0.0 0.2 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.0 0.5 GO:0009904 chloroplast accumulation movement(GO:0009904)
0.0 0.2 GO:0032042 mitochondrial DNA metabolic process(GO:0032042)
0.0 0.2 GO:1905177 tracheary element differentiation(GO:1905177)
0.0 0.3 GO:0009306 protein secretion(GO:0009306)
0.0 0.2 GO:0010315 auxin efflux(GO:0010315)
0.0 0.1 GO:0006526 arginine biosynthetic process(GO:0006526)
0.0 0.1 GO:0015904 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891)
0.0 0.1 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.0 0.1 GO:0010440 stomatal lineage progression(GO:0010440)
0.0 0.1 GO:0010222 stem vascular tissue pattern formation(GO:0010222)
0.0 0.2 GO:0006112 glycogen metabolic process(GO:0005977) glycogen biosynthetic process(GO:0005978) energy reserve metabolic process(GO:0006112)
0.0 0.1 GO:0042776 mitochondrial ATP synthesis coupled proton transport(GO:0042776)
0.0 0.2 GO:0070475 rRNA base methylation(GO:0070475)
0.0 0.2 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.4 GO:0040011 locomotion(GO:0040011)
0.0 0.0 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.0 0.0 GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway(GO:0071596)
0.0 0.0 GO:0000973 posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery(GO:0000973)
0.0 0.2 GO:0006108 malate metabolic process(GO:0006108)
0.0 0.0 GO:0080145 cysteine homeostasis(GO:0080145)
0.0 0.4 GO:0006099 tricarboxylic acid cycle(GO:0006099) citrate metabolic process(GO:0006101)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 3.4 GO:0043673 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
1.0 9.2 GO:0030076 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.9 3.7 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.8 3.1 GO:0044420 extracellular matrix component(GO:0044420) pollen coat(GO:0070505)
0.7 0.7 GO:0016328 lateral plasma membrane(GO:0016328)
0.7 3.7 GO:0009897 external side of plasma membrane(GO:0009897)
0.7 2.7 GO:0009509 chromoplast(GO:0009509)
0.7 5.3 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.7 27.5 GO:0010319 stromule(GO:0010319)
0.6 3.1 GO:0034425 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.6 4.6 GO:0009538 photosystem I reaction center(GO:0009538)
0.6 2.3 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.6 2.2 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.5 34.6 GO:0031977 thylakoid lumen(GO:0031977)
0.5 3.1 GO:0009360 DNA polymerase III complex(GO:0009360)
0.5 2.0 GO:0016461 unconventional myosin complex(GO:0016461)
0.4 7.5 GO:0009531 secondary cell wall(GO:0009531)
0.4 4.8 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.4 1.2 GO:1990298 bub1-bub3 complex(GO:1990298)
0.4 2.0 GO:0005663 DNA replication factor C complex(GO:0005663)
0.4 0.4 GO:0031356 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.4 6.1 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.4 4.9 GO:0045298 tubulin complex(GO:0045298)
0.4 5.1 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.4 2.5 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.3 1.4 GO:0010330 cellulose synthase complex(GO:0010330)
0.3 1.0 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.3 0.7 GO:0009501 amyloplast(GO:0009501)
0.3 1.0 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.3 2.8 GO:0005662 DNA replication factor A complex(GO:0005662)
0.3 0.9 GO:0005828 kinetochore microtubule(GO:0005828)
0.3 7.1 GO:0005871 kinesin complex(GO:0005871)
0.3 1.4 GO:0005960 glycine cleavage complex(GO:0005960)
0.3 6.4 GO:0016324 apical plasma membrane(GO:0016324)
0.3 72.8 GO:0048046 apoplast(GO:0048046)
0.3 0.8 GO:0033281 TAT protein transport complex(GO:0033281)
0.2 5.2 GO:0009574 preprophase band(GO:0009574)
0.2 41.5 GO:0009505 plant-type cell wall(GO:0009505)
0.2 2.4 GO:0031209 SCAR complex(GO:0031209)
0.2 1.2 GO:0090397 stigma papilla(GO:0090397)
0.2 1.1 GO:0010007 magnesium chelatase complex(GO:0010007)
0.2 0.4 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.2 1.3 GO:0009346 citrate lyase complex(GO:0009346)
0.2 56.1 GO:0031225 anchored component of membrane(GO:0031225)
0.2 1.5 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.2 1.5 GO:0000922 spindle pole(GO:0000922)
0.2 0.8 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.2 2.1 GO:0055028 cortical microtubule(GO:0055028)
0.2 4.3 GO:0009508 plastid chromosome(GO:0009508)
0.2 1.2 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.2 1.4 GO:0034990 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.2 0.8 GO:0009522 photosystem I(GO:0009522)
0.2 0.9 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.2 0.5 GO:0031897 Tic complex(GO:0031897)
0.2 0.5 GO:0032432 actin filament bundle(GO:0032432)
0.2 10.3 GO:0005874 microtubule(GO:0005874)
0.2 55.7 GO:0009579 thylakoid(GO:0009579)
0.2 0.5 GO:0044614 nuclear pore cytoplasmic filaments(GO:0044614)
0.2 0.5 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.2 0.5 GO:0030896 checkpoint clamp complex(GO:0030896)
0.1 5.2 GO:0009528 plastid inner membrane(GO:0009528)
0.1 0.3 GO:0034457 Mpp10 complex(GO:0034457)
0.1 0.6 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.1 1.5 GO:0031519 PcG protein complex(GO:0031519)
0.1 0.4 GO:0036387 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.1 51.1 GO:0009570 chloroplast stroma(GO:0009570)
0.1 4.0 GO:0000152 nuclear ubiquitin ligase complex(GO:0000152)
0.1 1.1 GO:0005850 eukaryotic translation initiation factor 2 complex(GO:0005850)
0.1 0.6 GO:0005677 chromatin silencing complex(GO:0005677)
0.1 2.0 GO:0005657 replication fork(GO:0005657)
0.1 0.7 GO:0071556 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.1 0.4 GO:0070652 HAUS complex(GO:0070652)
0.1 2.2 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.1 0.6 GO:0005763 organellar small ribosomal subunit(GO:0000314) mitochondrial small ribosomal subunit(GO:0005763)
0.1 10.8 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.1 4.5 GO:0005797 Golgi medial cisterna(GO:0005797)
0.1 0.3 GO:0030681 ribonuclease MRP complex(GO:0000172) nucleolar ribonuclease P complex(GO:0005655) multimeric ribonuclease P complex(GO:0030681)
0.1 0.3 GO:0032807 DNA ligase IV complex(GO:0032807)
0.1 0.2 GO:0043186 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.1 8.7 GO:0030312 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.1 0.4 GO:0000808 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.1 0.2 GO:0009527 plastid outer membrane(GO:0009527)
0.1 0.2 GO:0005687 U4 snRNP(GO:0005687)
0.1 0.5 GO:0042555 MCM complex(GO:0042555)
0.1 1.1 GO:0005875 microtubule associated complex(GO:0005875)
0.1 0.3 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.1 0.5 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 0.4 GO:0035619 root hair tip(GO:0035619)
0.1 0.2 GO:0030870 Mre11 complex(GO:0030870)
0.1 0.4 GO:0005784 Sec61 translocon complex(GO:0005784)
0.1 123.8 GO:0005576 extracellular region(GO:0005576)
0.1 0.3 GO:0098554 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.0 0.7 GO:0031902 late endosome membrane(GO:0031902)
0.0 3.2 GO:0015629 actin cytoskeleton(GO:0015629)
0.0 9.5 GO:0009941 chloroplast envelope(GO:0009941)
0.0 0.3 GO:0071782 cortical endoplasmic reticulum(GO:0032541) endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.0 1.0 GO:0000118 histone deacetylase complex(GO:0000118)
0.0 0.1 GO:0002189 ribose phosphate diphosphokinase complex(GO:0002189)
0.0 4.2 GO:0022626 cytosolic ribosome(GO:0022626)
0.0 0.4 GO:0030686 90S preribosome(GO:0030686)
0.0 0.2 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 0.3 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 0.2 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.0 0.1 GO:0032044 DSIF complex(GO:0032044)
0.0 0.8 GO:0005811 lipid particle(GO:0005811)
0.0 0.4 GO:0045239 tricarboxylic acid cycle enzyme complex(GO:0045239)
0.0 0.0 GO:0042646 plastid nucleoid(GO:0042646)
0.0 0.1 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.0 0.2 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.0 0.0 GO:0031429 box H/ACA snoRNP complex(GO:0031429) box H/ACA RNP complex(GO:0072588)
0.0 0.0 GO:0034703 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.0 0.0 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.0 0.2 GO:0030119 AP-type membrane coat adaptor complex(GO:0030119)
0.0 0.0 GO:0097196 Shu complex(GO:0097196)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.8 5.5 GO:1990465 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
1.7 5.2 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
1.5 9.0 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
1.4 10.8 GO:0019137 thioglucosidase activity(GO:0019137)
1.2 3.7 GO:0009374 biotin binding(GO:0009374)
1.1 3.3 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
1.1 3.2 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
1.0 2.9 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
1.0 4.8 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
1.0 2.9 GO:0000234 phosphoethanolamine N-methyltransferase activity(GO:0000234)
0.9 2.8 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.9 2.7 GO:0015928 alpha-L-fucosidase activity(GO:0004560) fucosidase activity(GO:0015928)
0.8 10.5 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.8 3.1 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.8 24.7 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.8 3.1 GO:0070402 NADPH binding(GO:0070402)
0.8 6.9 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.8 0.8 GO:0031409 pigment binding(GO:0031409)
0.8 2.3 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.7 1.5 GO:0019187 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.7 8.0 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.7 8.0 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.7 2.2 GO:0047100 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity(GO:0047100)
0.7 2.8 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.6 14.9 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.6 8.5 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.6 2.4 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.6 13.0 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.6 1.7 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
0.6 1.7 GO:0000170 sphingosine hydroxylase activity(GO:0000170)
0.6 2.3 GO:0009784 transmembrane receptor histidine kinase activity(GO:0009784) transmembrane histidine kinase cytokinin receptor activity(GO:0009885)
0.6 2.3 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.6 1.7 GO:0004347 glucose-6-phosphate isomerase activity(GO:0004347)
0.5 13.7 GO:0004565 beta-galactosidase activity(GO:0004565)
0.5 14.0 GO:0016168 chlorophyll binding(GO:0016168)
0.5 4.8 GO:0016744 transferase activity, transferring aldehyde or ketonic groups(GO:0016744)
0.5 6.4 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.5 1.6 GO:0010291 carotene beta-ring hydroxylase activity(GO:0010291)
0.5 1.6 GO:0016728 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.5 12.9 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.5 3.1 GO:0015288 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.5 1.5 GO:0015026 coreceptor activity(GO:0015026)
0.5 3.6 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.5 3.0 GO:0004126 cytidine deaminase activity(GO:0004126)
0.5 2.0 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.5 2.5 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.5 4.0 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.5 2.4 GO:0016752 sinapoyltransferase activity(GO:0016752) O-sinapoyltransferase activity(GO:0016753)
0.5 1.9 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.5 11.9 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.5 1.8 GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.5 1.8 GO:0004075 biotin carboxylase activity(GO:0004075)
0.5 2.7 GO:0003913 DNA photolyase activity(GO:0003913)
0.4 5.3 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.4 2.1 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.4 1.3 GO:0015099 cobalt ion transmembrane transporter activity(GO:0015087) nickel cation transmembrane transporter activity(GO:0015099)
0.4 3.4 GO:0042299 lupeol synthase activity(GO:0042299)
0.4 8.4 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.4 4.6 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.4 2.1 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.4 30.1 GO:0003777 microtubule motor activity(GO:0003777)
0.4 1.6 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.4 8.0 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.4 3.5 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.4 1.2 GO:0016842 amidine-lyase activity(GO:0016842)
0.4 5.0 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.4 1.5 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.4 1.1 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.4 1.1 GO:0016642 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.4 2.9 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.4 1.8 GO:0080139 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.3 7.0 GO:0005199 structural constituent of cell wall(GO:0005199)
0.3 1.7 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.3 4.5 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.3 3.4 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.3 1.3 GO:0004817 cysteine-tRNA ligase activity(GO:0004817)
0.3 2.6 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.3 3.3 GO:0009378 four-way junction helicase activity(GO:0009378)
0.3 1.0 GO:0047912 galacturonokinase activity(GO:0047912)
0.3 5.5 GO:0016157 sucrose synthase activity(GO:0016157)
0.3 2.2 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.3 1.9 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.3 3.1 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.3 0.6 GO:0009884 cytokinin receptor activity(GO:0009884)
0.3 1.5 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.3 0.6 GO:0036310 annealing helicase activity(GO:0036310)
0.3 5.5 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.3 1.8 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.3 12.2 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.3 1.2 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.3 1.8 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.3 2.4 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.3 0.8 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.3 1.1 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.3 2.7 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.3 1.3 GO:0004333 fumarate hydratase activity(GO:0004333)
0.3 0.8 GO:0045430 chalcone isomerase activity(GO:0045430)
0.3 2.0 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.2 1.5 GO:0043015 gamma-tubulin binding(GO:0043015)
0.2 2.5 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.2 0.7 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.2 1.2 GO:0042085 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.2 1.4 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.2 2.8 GO:0008061 chitin binding(GO:0008061)
0.2 2.6 GO:0016872 intramolecular lyase activity(GO:0016872)
0.2 2.5 GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.2 0.9 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.2 2.7 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.2 2.5 GO:0016721 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.2 1.3 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.2 10.7 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.2 1.1 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.2 0.7 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.2 0.7 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.2 6.3 GO:0000146 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.2 1.7 GO:0043142 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.2 14.3 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.2 1.5 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.2 0.6 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.2 2.3 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.2 0.6 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.2 0.6 GO:0004044 amidophosphoribosyltransferase activity(GO:0004044)
0.2 0.8 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.2 1.0 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.2 0.8 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.2 13.8 GO:0004650 polygalacturonase activity(GO:0004650)
0.2 3.3 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.2 1.0 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.2 0.6 GO:0035671 enone reductase activity(GO:0035671)
0.2 0.6 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.2 2.3 GO:0019104 DNA N-glycosylase activity(GO:0019104)
0.2 2.7 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.2 1.4 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.2 5.3 GO:0008266 poly(U) RNA binding(GO:0008266)
0.2 0.6 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.2 0.6 GO:0019136 deoxynucleoside kinase activity(GO:0019136)
0.2 1.1 GO:0051002 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.2 0.7 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.2 7.2 GO:0016759 cellulose synthase activity(GO:0016759)
0.2 0.9 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.2 1.2 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.2 0.7 GO:0015245 fatty acid transporter activity(GO:0015245)
0.2 3.5 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.2 10.5 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.2 1.7 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.2 2.2 GO:2001070 starch binding(GO:2001070)
0.2 1.0 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.2 0.5 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.2 1.8 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.2 1.0 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.2 0.6 GO:0003862 3-isopropylmalate dehydrogenase activity(GO:0003862)
0.2 0.6 GO:0035175 histone serine kinase activity(GO:0035174) histone kinase activity (H3-S10 specific)(GO:0035175)
0.2 0.5 GO:0004462 lactoylglutathione lyase activity(GO:0004462)
0.2 0.6 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.2 0.6 GO:0070182 DNA polymerase binding(GO:0070182)
0.2 0.6 GO:0004348 glucosylceramidase activity(GO:0004348)
0.2 2.0 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.2 2.3 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.2 0.3 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.1 2.1 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.1 0.4 GO:0004150 dihydroneopterin aldolase activity(GO:0004150)
0.1 1.8 GO:0030060 L-malate dehydrogenase activity(GO:0030060)
0.1 0.7 GO:0008184 glycogen phosphorylase activity(GO:0008184)
0.1 1.1 GO:0051185 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.1 1.4 GO:0043047 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.1 1.1 GO:0004467 long-chain fatty acid-CoA ligase activity(GO:0004467)
0.1 0.7 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.1 0.7 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.1 0.4 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.1 0.3 GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor(GO:0052592)
0.1 1.1 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.1 1.4 GO:0004312 fatty acid synthase activity(GO:0004312)
0.1 0.7 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.1 1.3 GO:0015197 peptide transporter activity(GO:0015197) oligopeptide transporter activity(GO:0015198)
0.1 0.5 GO:0015120 phosphoglycerate transmembrane transporter activity(GO:0015120) aldonate transmembrane transporter activity(GO:0042879)
0.1 1.0 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.1 0.4 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.1 0.6 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.1 3.5 GO:0008810 cellulase activity(GO:0008810)
0.1 0.4 GO:0047661 racemase and epimerase activity, acting on amino acids and derivatives(GO:0016855) racemase activity, acting on amino acids and derivatives(GO:0036361) amino-acid racemase activity(GO:0047661)
0.1 0.5 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.1 1.3 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.1 1.0 GO:0000996 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.1 1.0 GO:0004619 phosphoglycerate mutase activity(GO:0004619)
0.1 13.4 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.1 1.0 GO:0004096 catalase activity(GO:0004096)
0.1 0.8 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.1 0.5 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.1 1.3 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.1 0.8 GO:0051018 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.1 1.3 GO:0004161 dimethylallyltranstransferase activity(GO:0004161)
0.1 3.3 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.1 0.8 GO:0051184 cofactor transporter activity(GO:0051184)
0.1 0.3 GO:0004807 triose-phosphate isomerase activity(GO:0004807)
0.1 0.3 GO:0004450 isocitrate dehydrogenase (NADP+) activity(GO:0004450)
0.1 0.6 GO:0035197 siRNA binding(GO:0035197)
0.1 5.9 GO:0004180 carboxypeptidase activity(GO:0004180)
0.1 1.2 GO:0004017 adenylate kinase activity(GO:0004017)
0.1 0.4 GO:0051011 microtubule minus-end binding(GO:0051011)
0.1 0.3 GO:0008936 nicotinamidase activity(GO:0008936)
0.1 1.2 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.1 0.6 GO:0051996 farnesyl-diphosphate farnesyltransferase activity(GO:0004310) squalene synthase activity(GO:0051996)
0.1 0.3 GO:0000009 alpha-1,6-mannosyltransferase activity(GO:0000009)
0.1 1.4 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.1 0.5 GO:0000150 recombinase activity(GO:0000150)
0.1 0.5 GO:0046624 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.1 0.5 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.1 0.3 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.1 1.9 GO:0008146 sulfotransferase activity(GO:0008146)
0.1 0.5 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.1 0.6 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.1 2.9 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 0.5 GO:0031177 phosphopantetheine binding(GO:0031177)
0.1 0.3 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.1 0.2 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.1 0.2 GO:0008893 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity(GO:0008893) diphosphoric monoester hydrolase activity(GO:0016794)
0.1 0.7 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.1 0.4 GO:0016436 rRNA (uridine) methyltransferase activity(GO:0016436) rRNA (uridine-N3-)-methyltransferase activity(GO:0070042)
0.1 1.7 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.1 0.2 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.1 0.7 GO:0004340 glucokinase activity(GO:0004340) glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.1 0.3 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.1 0.7 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.1 1.1 GO:0000250 lanosterol synthase activity(GO:0000250) oxidosqualene cyclase activity(GO:0031559)
0.1 0.5 GO:0045431 flavonol synthase activity(GO:0045431)
0.1 1.2 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.1 0.4 GO:0050113 inositol oxygenase activity(GO:0050113)
0.1 1.1 GO:0004629 phospholipase C activity(GO:0004629)
0.1 1.2 GO:0004568 chitinase activity(GO:0004568)
0.1 0.9 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.1 1.0 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.1 0.3 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.1 1.6 GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor(GO:0016655)
0.1 3.6 GO:0016278 lysine N-methyltransferase activity(GO:0016278) protein-lysine N-methyltransferase activity(GO:0016279)
0.1 0.3 GO:0052834 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.1 1.4 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.1 0.7 GO:0070569 uridylyltransferase activity(GO:0070569)
0.1 0.5 GO:0019825 oxygen binding(GO:0019825)
0.1 1.6 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.1 0.2 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.1 0.6 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.1 0.3 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.1 0.3 GO:0016731 oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor(GO:0016731)
0.1 0.9 GO:0004656 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798) peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.1 0.1 GO:0005034 osmosensor activity(GO:0005034)
0.1 0.5 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.1 2.1 GO:0005179 hormone activity(GO:0005179)
0.1 2.8 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.1 0.4 GO:0010429 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.1 0.2 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.1 4.4 GO:0003724 RNA helicase activity(GO:0003724)
0.1 0.4 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.1 0.5 GO:0043495 protein anchor(GO:0043495)
0.1 9.3 GO:0008134 transcription factor binding(GO:0008134)
0.0 0.5 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.0 0.3 GO:0004849 uridine kinase activity(GO:0004849)
0.0 0.7 GO:0051536 iron-sulfur cluster binding(GO:0051536) metal cluster binding(GO:0051540)
0.0 2.7 GO:0004683 calmodulin-dependent protein kinase activity(GO:0004683)
0.0 0.3 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.0 1.4 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 12.2 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.2 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.0 0.9 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.0 0.6 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.0 0.4 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.0 0.2 GO:0052740 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.0 1.7 GO:0043022 ribosome binding(GO:0043022)
0.0 0.1 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
0.0 0.3 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.0 3.0 GO:0008017 microtubule binding(GO:0008017)
0.0 0.3 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.0 0.4 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.0 1.9 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.1 GO:0004749 ribose phosphate diphosphokinase activity(GO:0004749)
0.0 0.1 GO:0005315 inorganic phosphate transmembrane transporter activity(GO:0005315)
0.0 1.5 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 0.4 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.0 0.3 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.0 0.6 GO:0008308 voltage-gated anion channel activity(GO:0008308)
0.0 0.1 GO:0004824 lysine-tRNA ligase activity(GO:0004824)
0.0 0.1 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.0 0.1 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.0 0.2 GO:0080146 L-cysteine desulfhydrase activity(GO:0080146)
0.0 1.5 GO:0005319 lipid transporter activity(GO:0005319)
0.0 0.4 GO:0046556 alpha-L-arabinofuranosidase activity(GO:0046556)
0.0 1.8 GO:0043621 protein self-association(GO:0043621)
0.0 0.2 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.0 1.0 GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor(GO:0016628)
0.0 0.2 GO:0004594 pantothenate kinase activity(GO:0004594)
0.0 1.0 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 0.2 GO:0019904 protein domain specific binding(GO:0019904)
0.0 1.3 GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors(GO:0016627)
0.0 0.1 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.0 0.2 GO:0047958 glycine:2-oxoglutarate aminotransferase activity(GO:0047958)
0.0 0.4 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.0 0.9 GO:0003678 DNA helicase activity(GO:0003678)
0.0 0.1 GO:0004049 anthranilate synthase activity(GO:0004049)
0.0 0.4 GO:0022832 voltage-gated ion channel activity(GO:0005244) voltage-gated channel activity(GO:0022832)
0.0 0.1 GO:0016882 cyclo-ligase activity(GO:0016882)
0.0 0.1 GO:0004129 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.0 0.4 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 0.2 GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters(GO:0016888)
0.0 0.1 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.0 1.1 GO:0051015 actin filament binding(GO:0051015)
0.0 0.1 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.0 0.2 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 0.2 GO:0003688 DNA replication origin binding(GO:0003688)
0.0 0.6 GO:0005262 calcium channel activity(GO:0005262)
0.0 0.1 GO:0080116 1,4-beta-D-xylan synthase activity(GO:0047517) glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.0 0.6 GO:0033558 histone deacetylase activity(GO:0004407) protein deacetylase activity(GO:0033558)
0.0 0.1 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.0 0.1 GO:0016819 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.0 0.2 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 0.1 GO:0042895 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.0 0.1 GO:0016161 beta-amylase activity(GO:0016161)
0.0 0.2 GO:0019210 kinase inhibitor activity(GO:0019210)
0.0 0.3 GO:0030599 pectinesterase activity(GO:0030599)
0.0 0.3 GO:0004564 beta-fructofuranosidase activity(GO:0004564)
0.0 0.1 GO:0019238 cyclohydrolase activity(GO:0019238)
0.0 0.1 GO:0000822 inositol hexakisphosphate binding(GO:0000822)
0.0 0.1 GO:0008169 C-methyltransferase activity(GO:0008169)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
2.0 15.9 PID CMYB PATHWAY C-MYB transcription factor network
1.5 5.8 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.6 1.8 PID IL12 2PATHWAY IL12-mediated signaling events
0.4 1.3 PID AURORA A PATHWAY Aurora A signaling
0.4 4.2 PID FANCONI PATHWAY Fanconi anemia pathway
0.3 1.0 PID ATM PATHWAY ATM pathway
0.3 0.3 PID IL8 CXCR2 PATHWAY IL8- and CXCR2-mediated signaling events
0.2 1.6 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.2 0.6 PID NECTIN PATHWAY Nectin adhesion pathway
0.2 1.1 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.2 1.7 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.2 0.7 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.2 1.0 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.1 0.1 PID ARF 3PATHWAY Arf1 pathway
0.1 0.2 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.0 0.1 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.0 0.1 PID AJDISS 2PATHWAY Posttranslational regulation of adherens junction stability and dissassembly
0.0 0.1 PID ERA GENOMIC PATHWAY Validated nuclear estrogen receptor alpha network
0.0 0.1 PID NOTCH PATHWAY Notch signaling pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
3.7 22.0 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.7 2.8 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.5 1.0 REACTOME MEIOTIC SYNAPSIS Genes involved in Meiotic Synapsis
0.4 1.3 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
0.4 1.8 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.3 1.0 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.3 2.8 REACTOME REPAIR SYNTHESIS FOR GAP FILLING BY DNA POL IN TC NER Genes involved in Repair synthesis for gap-filling by DNA polymerase in TC-NER
0.2 0.7 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.2 4.3 REACTOME DEVELOPMENTAL BIOLOGY Genes involved in Developmental Biology
0.2 1.1 REACTOME MHC CLASS II ANTIGEN PRESENTATION Genes involved in MHC class II antigen presentation
0.2 0.6 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.2 0.6 REACTOME SIGNAL ATTENUATION Genes involved in Signal attenuation
0.2 2.6 REACTOME ORC1 REMOVAL FROM CHROMATIN Genes involved in Orc1 removal from chromatin
0.2 0.5 REACTOME NOD1 2 SIGNALING PATHWAY Genes involved in NOD1/2 Signaling Pathway
0.2 0.9 REACTOME GENERIC TRANSCRIPTION PATHWAY Genes involved in Generic Transcription Pathway
0.1 0.4 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.1 0.7 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.1 0.1 REACTOME TRANS GOLGI NETWORK VESICLE BUDDING Genes involved in trans-Golgi Network Vesicle Budding
0.1 0.6 REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES Genes involved in Antiviral mechanism by IFN-stimulated genes
0.1 1.7 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.1 0.2 REACTOME GASTRIN CREB SIGNALLING PATHWAY VIA PKC AND MAPK Genes involved in Gastrin-CREB signalling pathway via PKC and MAPK
0.1 0.8 REACTOME MEIOSIS Genes involved in Meiosis
0.1 0.8 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.1 0.1 REACTOME CDC6 ASSOCIATION WITH THE ORC ORIGIN COMPLEX Genes involved in CDC6 association with the ORC:origin complex
0.1 0.2 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.0 0.1 REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein
0.0 0.1 REACTOME SIGNALING BY NOTCH1 Genes involved in Signaling by NOTCH1
0.0 0.1 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.0 0.0 REACTOME SIGNALING BY PDGF Genes involved in Signaling by PDGF