Project

GSE43616: Time-course of wild-type Arabidopsis leaf

Navigation
Downloads

Results for AT5G52830

Z-value: 0.83

Transcription factors associated with AT5G52830

Gene Symbol Gene ID Gene Info
AT5G52830
AT5G52830 WRKY DNA-binding protein 27

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
WRKY27arTal_v1_Chr5_+_21410769_21410769-0.762.8e-06Click!

Activity profile of AT5G52830 motif

Sorted Z-values of AT5G52830 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_+_3157501 4.31 AT1G09750.1
AT1G09750
Eukaryotic aspartyl protease family protein
Chr5_-_22560461 3.30 AT5G55730.2
AT5G55730.1
FLA1
FASCICLIN-like arabinogalactan 1
Chr1_-_59215 3.10 AT1G01120.1
KCS1
3-ketoacyl-CoA synthase 1
Chr4_-_17606924 3.02 AT4G37450.1
AT4G37450.2
AGP18
arabinogalactan protein 18
Chr1_+_7886323 2.74 AT1G22330.1
AT1G22330
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr1_-_21614169 2.71 AT1G58270.1
ZW9
TRAF-like family protein
Chr2_-_15137012 2.70 AT2G36050.1
OFP15
ovate family protein 15
Chr5_+_152446 2.69 AT5G01370.1
ACI1
ALC-interacting protein 1
Chr2_-_8971339 2.68 AT2G20835.1
AT2G20835
hypothetical protein
Chr3_-_6882235 2.60 AT3G19820.3
AT3G19820.1
AT3G19820.2
DWF1
cell elongation protein / DWARF1 / DIMINUTO (DIM)
Chr5_-_18371021 2.52 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
Chr4_+_620691 2.49 AT4G01460.1
AT4G01460.2
AT4G01460
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_-_18026077 2.46 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
Chr1_-_84864 2.44 AT1G01190.1
AT1G01190.2
CYP78A8
cytochrome P450, family 78, subfamily A, polypeptide 8
Chr1_+_6409655 2.42 AT1G18620.3
AT1G18620.1
AT1G18620.4
TRM3
LONGIFOLIA protein
Chr4_-_8307934 2.40 AT4G14440.1
HCD1
3-hydroxyacyl-CoA dehydratase 1
Chr3_-_19595834 2.39 AT3G52870.1
AT3G52870
IQ calmodulin-binding motif family protein
Chr1_+_9421009 2.36 AT1G27120.1
AT1G27120.2
AT1G27120
Galactosyltransferase family protein
Chr2_-_19563960 2.29 AT2G47750.1
GH3.9
putative indole-3-acetic acid-amido synthetase GH3.9
Chr3_+_18049571 2.27 AT3G48730.1
GSA2
glutamate-1-semialdehyde 2,1-aminomutase 2
Chr5_-_990630 2.24 AT5G03760.1
ATCSLA09
Nucleotide-diphospho-sugar transferases superfamily protein
Chr4_-_7857933 2.24 AT4G13500.1
AT4G13500
transmembrane protein
Chr4_+_11663186 2.24 AT4G22010.1
sks4
SKU5 similar 4
Chr4_-_69884 2.23 AT4G00165.2
AT4G00165.1
AT4G00165
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_26515188 2.16 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
Chr1_+_6410947 2.12 AT1G18620.5
TRM3
LONGIFOLIA protein
Chr4_+_16357421 2.11 AT4G34160.1
CYCD3%3B1
CYCLIN D3;1
Chr1_+_28428671 2.09 AT1G75710.1
AT1G75710
C2H2-like zinc finger protein
Chr5_-_3278461 2.08 AT5G10430.1
AGP4
arabinogalactan protein 4
Chr1_+_6410033 2.08 AT1G18620.2
TRM3
LONGIFOLIA protein
Chr4_+_160643 2.03 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr3_+_18973126 2.02 AT3G51080.1
GATA6
GATA transcription factor 6
Chr3_+_20780175 1.99 AT3G55990.1
ESK1
trichome birefringence-like protein (DUF828)
Chr5_-_26501955 1.95 AT5G66330.1
AT5G66330
Leucine-rich repeat (LRR) family protein
Chr2_+_9636346 1.94 AT2G22670.1
AT2G22670.4
AT2G22670.2
AT2G22670.5
AT2G22670.3
IAA8
indoleacetic acid-induced protein 8
Chr4_-_14827211 1.94 AT4G30280.1
XTH18
xyloglucan endotransglucosylase/hydrolase 18
Chr1_-_1169034 1.93 AT1G04360.1
AT1G04360
RING/U-box superfamily protein
Chr1_+_10477885 1.93 AT1G29930.1
CAB1
chlorophyll A/B binding protein 1
Chr3_-_20841695 1.90 AT3G56160.1
AT3G56160.3
AT3G56160.2
AT3G56160.4
AT3G56160
Sodium Bile acid symporter family
Chr1_+_29413874 1.89 AT1G78170.1
AT1G78170
E3 ubiquitin-protein ligase
Chr3_-_2175686 1.87 AT3G06880.1
AT3G06880.5
AT3G06880.4
AT3G06880.3
AT3G06880.2
AT3G06880
Transducin/WD40 repeat-like superfamily protein
Chr1_-_8235019 1.84 AT1G23205.1
AT1G23205
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr3_+_6266946 1.83 AT3G18280.2
AT3G18280.1
AT3G18280
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_+_19417372 1.81 AT3G52370.2
AT3G52370.1
FLA15
FASCICLIN-like arabinogalactan protein 15 precursor
Chr4_+_10651744 1.81 AT4G19530.1
AT4G19530.2
AT4G19530
disease resistance protein (TIR-NBS-LRR class) family
Chr5_-_345457 1.79 AT5G01890.1
AT5G01890
Leucine-rich receptor-like protein kinase family protein
Chr5_-_5072492 1.79 AT5G15580.1
LNG1
longifolia1
Chr5_-_19939797 1.77 AT5G49170.1
AT5G49170
hypothetical protein
Chr1_-_8940613 1.77 AT1G25450.1
KCS5
3-ketoacyl-CoA synthase 5
Chr1_-_29643535 1.75 AT1G78850.1
AT1G78850
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Chr4_-_14439723 1.75 AT4G29310.1
AT4G29310.2
AT4G29310
DUF1005 family protein (DUF1005)
Chr2_-_12277417 1.75 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
Chr1_-_29647691 1.73 AT1G78860.1
AT1G78860
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Chr1_+_12188678 1.72 AT1G33610.1
AT1G33610
Leucine-rich repeat (LRR) family protein
Chr3_-_1855063 1.71 AT3G06130.2
AT3G06130.1
AT3G06130
Heavy metal transport/detoxification superfamily protein
Chr2_-_12277245 1.71 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
Chr4_-_13496738 1.69 AT4G26830.1
AT4G26830.2
AT4G26830
O-Glycosyl hydrolases family 17 protein
Chr5_+_23077120 1.68 AT5G57030.1
LUT2
Lycopene beta/epsilon cyclase protein
Chr5_+_7778017 1.67 AT5G23120.2
AT5G23120.1
HCF136
photosystem II stability/assembly factor, chloroplast (HCF136)
Chr3_+_8194606 1.66 AT3G23050.1
AT3G23050.3
AT3G23050.2
IAA7
indole-3-acetic acid 7
Chr4_+_901375 1.66 AT4G02060.1
PRL
Minichromosome maintenance (MCM2/3/5) family protein
Chr1_-_11872926 1.66 AT1G32780.1
AT1G32780
GroES-like zinc-binding dehydrogenase family protein
Chr1_+_17065858 1.65 AT1G45130.2
BGAL5
beta-galactosidase 5
Chr5_-_7419335 1.64 AT5G22390.1
AT5G22390
FANTASTIC four-like protein (DUF3049)
Chr1_-_17133809 1.64 AT1G45207.3
AT1G45207
Remorin family protein
Chr2_-_5776289 1.63 AT2G13820.2
AT2G13820.1
AT2G13820.3
XYP2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_+_11907355 1.62 AT4G22620.1
AT4G22620
SAUR-like auxin-responsive protein family
Chr4_-_18510555 1.62 AT4G39900.1
AT4G39900
adenine deaminase
Chr4_-_8350030 1.62 AT4G14550.4
IAA14
indole-3-acetic acid inducible 14
Chr2_-_9699915 1.61 AT2G22795.3
AT2G22795.2
AT2G22795.1
AT2G22795
hypothetical protein
Chr3_+_957112 1.60 AT3G03780.1
AT3G03780.3
MS2
methionine synthase 2
Chr4_+_14167635 1.60 AT4G28706.2
AT4G28706.3
AT4G28706.4
AT4G28706.1
AT4G28706
pfkB-like carbohydrate kinase family protein
Chr4_-_524249 1.59 AT4G01250.1
WRKY22
WRKY family transcription factor
Chr3_+_956862 1.58 AT3G03780.2
MS2
methionine synthase 2
Chr1_+_17065111 1.57 AT1G45130.1
BGAL5
beta-galactosidase 5
Chr2_-_12885768 1.57 AT2G30200.2
AT2G30200.1
EMB3147
EMBRYO DEFECTIVE 3147
Chr4_+_900636 1.55 AT4G02060.2
PRL
Minichromosome maintenance (MCM2/3/5) family protein
Chr1_-_21717380 1.55 AT1G58440.1
XF1
FAD/NAD(P)-binding oxidoreductase family protein
Chr5_+_25159208 1.54 AT5G62670.1
HA11
H[+]-ATPase 11
Chr3_-_20806333 1.54 AT3G56060.1
AT3G56060
Glucose-methanol-choline (GMC) oxidoreductase family protein
Chr1_+_24647121 1.53 AT1G66180.1
AT1G66180
Eukaryotic aspartyl protease family protein
Chr2_-_5675995 1.52 AT2G13610.1
ABCG5
ABC-2 type transporter family protein
Chr4_+_16394600 1.50 AT4G34250.1
KCS16
3-ketoacyl-CoA synthase 16
Chr1_-_19101265 1.50 AT1G51500.1
ABCG12
ABC-2 type transporter family protein
Chr1_+_24292372 1.50 AT1G65390.1
AT1G65390.3
AT1G65390.2
PP2-A5
phloem protein 2 A5
Chr3_-_20257916 1.49 AT3G54720.1
AMP1
Peptidase M28 family protein
Chr5_-_14566439 1.49 AT5G36925.1
AT5G36925
hypothetical protein
Chr5_-_25081141 1.49 AT5G62470.2
MYB96
myb domain protein 96
Chr1_-_17133548 1.48 AT1G45207.2
AT1G45207
Remorin family protein
Chr4_-_8350263 1.48 AT4G14550.1
AT4G14550.2
AT4G14550.3
IAA14
indole-3-acetic acid inducible 14
Chr1_+_5361865 1.48 AT1G15570.1
CYCA2%3B3
CYCLIN A2;3
Chr1_-_26327965 1.48 AT1G69900.1
AT1G69900
Actin cross-linking protein
Chr1_+_21502905 1.48 AT1G58070.1
AT1G58070
WEB family protein
Chr2_+_15906555 1.47 AT2G38010.2
AT2G38010.3
AT2G38010
Neutral/alkaline non-lysosomal ceramidase
Chr1_-_5789312 1.47 AT1G16920.1
RABA1b
RAB GTPase homolog A1B
Chr3_-_22322661 1.47 AT3G60390.1
HAT3
homeobox-leucine zipper protein 3
Chr5_-_25775429 1.47 AT5G64460.4
AT5G64460.6
AT5G64460.9
AT5G64460.7
AT5G64460.8
AT5G64460.1
AT5G64460.10
AT5G64460.11
AT5G64460.5
AT5G64460.3
AT5G64460.2
AT5G64460
Phosphoglycerate mutase family protein
Chr5_-_19882462 1.46 AT5G49030.2
AT5G49030.1
OVA2
tRNA synthetase class I (I, L, M and V) family protein
Chr2_-_13020311 1.46 AT2G30570.1
PSBW
photosystem II reaction center W
Chr1_-_754262 1.45 AT1G03130.1
PSAD-2
photosystem I subunit D-2
Chr1_+_3031046 1.45 AT1G09390.1
AT1G09390
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_+_20776220 1.45 AT3G55980.2
AT3G55980.1
SZF1
salt-inducible zinc finger 1
Chr4_-_10316886 1.45 AT4G18780.1
IRX1
cellulose synthase family protein
Chr1_-_12130444 1.45 AT1G33440.1
AT1G33440
Major facilitator superfamily protein
Chr5_-_4618912 1.44 AT5G14320.2
AT5G14320.1
EMB3137
Ribosomal protein S13/S18 family
Chr5_-_25080858 1.44 AT5G62470.1
MYB96
myb domain protein 96
Chr4_+_14192569 1.44 AT4G28720.1
YUC8
Flavin-binding monooxygenase family protein
Chr4_+_17739514 1.44 AT4G37750.1
ANT
Integrase-type DNA-binding superfamily protein
Chr3_-_10044539 1.42 AT3G27200.1
AT3G27200
Cupredoxin superfamily protein
Chr1_-_10306587 1.42 AT1G29450.2
AT1G29450.1
AT1G29450
SAUR-like auxin-responsive protein family
Chr2_+_15906862 1.42 AT2G38010.1
AT2G38010
Neutral/alkaline non-lysosomal ceramidase
Chr4_-_9133161 1.40 AT4G16141.1
AT4G16141
GATA type zinc finger transcription factor family protein
Chr5_+_26261136 1.39 AT5G65683.1
WAVH2
Zinc finger (C3HC4-type RING finger) family protein
Chr2_+_8987584 1.39 AT2G20890.1
PSB29
photosystem II reaction center PSB29 protein
Chr5_-_19883251 1.39 AT5G49040.1
AT5G49030.3
AT5G49040
OVA2
Disease resistance-responsive (dirigent-like protein) family protein
tRNA synthetase class I (I, L, M and V) family protein
Chr5_+_7676938 1.39 AT5G22940.2
F8H
glucuronoxylan glucuronosyltransferase, putative
Chr4_+_3356535 1.38 AT4G06534.1
AT4G06534
transmembrane protein
Chr3_+_21680027 1.38 AT3G58620.1
AT3G58620.2
TTL4
tetratricopetide-repeat thioredoxin-like 4
Chr1_+_8333472 1.37 AT1G23480.4
AT1G23480.2
CSLA03
cellulose synthase-like A3
Chr1_+_29903353 1.37 AT1G79500.2
AT1G79500.3
AT1G79500.4
AT1G79500.1
AtkdsA1
Aldolase-type TIM barrel family protein
Chr3_+_22151164 1.36 AT3G59970.3
AT3G59970.2
AT3G59970.1
MTHFR1
methylenetetrahydrofolate reductase 1
Chr2_+_15117015 1.36 AT2G36000.2
AT2G36000.1
EMB3114
Mitochondrial transcription termination factor family protein
Chr2_+_16869189 1.36 AT2G40400.1
AT2G40400.2
AT2G40400.3
AT2G40400
DUF399 family protein, putative (DUF399 and DUF3411)
Chr5_+_16127725 1.35 AT5G40330.1
MYB23
myb domain protein 23
Chr5_+_17550179 1.35 AT5G43700.1
ATAUX2-11
AUX/IAA transcriptional regulator family protein
Chr4_-_11334168 1.32 AT4G21270.1
ATK1
kinesin 1
Chr2_+_12703469 1.32 AT2G29730.1
UGT71D1
UDP-glucosyl transferase 71D1
Chr5_+_7676662 1.32 AT5G22940.1
F8H
glucuronoxylan glucuronosyltransferase, putative
Chr4_+_133643 1.31 AT4G00310.1
AT4G00310.2
EDA8
Putative membrane lipoprotein
Chr2_-_18706266 1.31 AT2G45400.4
AT2G45400.2
AT2G45400.1
BEN1
NAD(P)-binding Rossmann-fold superfamily protein
Chr2_+_16775424 1.31 AT2G40150.1
TBL28
TRICHOME BIREFRINGENCE-LIKE 28
Chr5_+_26572265 1.30 AT5G66580.1
AT5G66580
hypothetical protein
Chr3_-_8564717 1.29 AT3G23760.1
AT3G23760
transferring glycosyl group transferase
Chr1_-_3931701 1.29 AT1G11670.1
AT1G11670
MATE efflux family protein
Chr3_+_7812861 1.29 AT3G22150.2
AT3G22150.1
AT3G22150
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_22515458 1.29 AT5G55570.2
AT5G55570.1
AT5G55570
transmembrane protein
Chr5_+_6138717 1.28 AT5G18500.3
AT5G18500.4
AT5G18500.5
AT5G18500
Protein kinase superfamily protein
Chr1_+_7032070 1.27 AT1G20310.1
AT1G20310
syringolide-induced protein
Chr3_-_20841541 1.27 AT3G56160.5
AT3G56160
Sodium Bile acid symporter family
Chr2_-_8983814 1.26 AT2G20875.1
EPF1
epidermal patterning factor 1
Chr2_+_417427 1.26 AT2G01910.2
ATMAP65-6
Microtubule associated protein (MAP65/ASE1) family protein
Chr3_+_20880016 1.26 AT3G56300.2
AT3G56300.3
AT3G56300.1
AT3G56300
Cysteinyl-tRNA synthetase, class Ia family protein
Chr3_+_22798984 1.26 AT3G61610.1
AT3G61610.2
AT3G61610
Galactose mutarotase-like superfamily protein
Chr3_-_3003454 1.26 AT3G09780.1
CCR1
CRINKLY4 related 1
Chr4_+_8883825 1.26 AT4G15560.1
CLA1
Deoxyxylulose-5-phosphate synthase
Chr3_-_5812690 1.25 AT3G17040.2
AT3G17040.4
AT3G17040.3
AT3G17040.1
HCF107
high chlorophyll fluorescent 107
Chr5_-_26899736 1.24 AT5G67411.1
AT5G67411
GRAS family transcription factor
Chr4_-_9331646 1.24 AT4G16563.1
AT4G16563
Eukaryotic aspartyl protease family protein
Chr4_-_13460105 1.24 AT4G26690.1
SHV3
PLC-like phosphodiesterase family protein
Chr2_+_8063023 1.23 AT2G18570.1
AT2G18570
UDP-Glycosyltransferase superfamily protein
Chr1_+_4157654 1.23 AT1G12244.1
AT1G12244
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr1_-_24171502 1.23 AT1G65060.2
AT1G65060.1
4CL3
4-coumarate:CoA ligase 3
Chr5_-_17185032 1.22 AT5G42860.1
AT5G42860
late embryogenesis abundant protein, group 2
Chr2_-_17562947 1.22 AT2G42110.1
AT2G42110
hypothetical protein
Chr3_+_20644843 1.22 AT3G55646.1
AT3G55646
TPRXL
Chr1_-_3396953 1.22 AT1G10360.1
GSTU18
glutathione S-transferase TAU 18
Chr2_+_416021 1.22 AT2G01910.1
ATMAP65-6
Microtubule associated protein (MAP65/ASE1) family protein
Chr3_-_4953423 1.21 AT3G14740.2
AT3G14740.1
AT3G14740
RING/FYVE/PHD zinc finger superfamily protein
Chr2_-_7221814 1.21 AT2G16660.2
AT2G16660.1
AT2G16660
Major facilitator superfamily protein
Chr1_-_9024081 1.21 AT1G26100.1
AT1G26100
Cytochrome b561/ferric reductase transmembrane protein family
Chr3_+_22939388 1.21 AT3G61950.4
AT3G61950.3
AT3G61950.1
AT3G61950.5
AT3G61950
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_+_6138242 1.21 AT5G18500.1
AT5G18500.2
AT5G18500
Protein kinase superfamily protein
Chr2_+_16934621 1.20 AT2G40550.1
ETG1
E2F target protein 1 (ETG1)
Chr1_+_2630891 1.19 AT1G08340.1
AT1G08340
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
Chr3_-_5153642 1.19 AT3G15310.1
AT3G15310

Chr5_-_5286780 1.19 AT5G16190.4
AT5G16190.3
AT5G16190.2
CSLA11
cellulose synthase like A11
Chr5_+_5485203 1.19 AT5G16715.1
EMB2247
protein EMBRYO DEFECTIVE 2247
Chr3_+_6465748 1.18 AT3G18773.1
AT3G18773
RING/U-box superfamily protein
Chr2_+_15706285 1.18 AT2G37430.1
ZAT11
C2H2 and C2HC zinc fingers superfamily protein
Chr4_+_17849538 1.18 AT4G37970.1
AT4G37970.2
AT4G37970.3
AT4G37970.4
CAD6
cinnamyl alcohol dehydrogenase 6
Chr1_-_25670345 1.17 AT1G68460.1
IPT1
isopentenyltransferase 1
Chr1_-_3443957 1.17 AT1G10470.3
AT1G10470.2
ARR4
response regulator 4
Chr5_-_26491382 1.17 AT5G66310.3
AT5G66310
ATP binding microtubule motor family protein
Chr1_-_3444360 1.16 AT1G10470.1
ARR4
response regulator 4
Chr4_-_18358980 1.16 AT4G39460.2
AT4G39460.3
AT4G39460.1
SAMC1
S-adenosylmethionine carrier 1
Chr5_-_26490703 1.15 AT5G66310.2
AT5G66310
ATP binding microtubule motor family protein
Chr3_-_2295680 1.15 AT3G07210.1
AT3G07210
hypothetical protein
Chr4_+_10069458 1.14 AT4G18195.1
PUP8
purine permease 8
Chr2_-_11542357 1.14 AT2G27040.2
AT2G27040.1
AGO4
Argonaute family protein
Chr5_-_26491721 1.14 AT5G66310.1
AT5G66310
ATP binding microtubule motor family protein
Chr1_-_7968692 1.13 AT1G22550.1
AT1G22550
Major facilitator superfamily protein
Chr4_+_12366851 1.13 AT4G23740.2
AT4G23740
Leucine-rich repeat protein kinase family protein
Chr4_-_12339967 1.13 AT4G23690.1
DIR6
Disease resistance-responsive (dirigent-like protein) family protein
Chr5_+_19031301 1.13 AT5G46880.1
AT5G46880.3
HB-7
homeobox-7
Chr3_+_22786022 1.13 AT3G61580.1
SLD1
Fatty acid/sphingolipid desaturase
Chr3_-_325346 1.13 AT3G01960.1
AT3G01960
hypothetical protein
Chr2_-_14432482 1.13 AT2G34180.1
CIPK13
CBL-interacting protein kinase 13
Chr1_+_6697874 1.12 AT1G19380.1
AT1G19380
sugar, putative (DUF1195)
Chr2_+_14098778 1.12 AT2G33255.1
AT2G33255
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr1_-_2711000 1.12 AT1G08560.1
SYP111
syntaxin of plants 111
Chr4_+_12366082 1.12 AT4G23740.1
AT4G23740
Leucine-rich repeat protein kinase family protein
Chr5_-_23946430 1.11 AT5G59360.1
AT5G59360
hypothetical protein
Chr2_-_15130828 1.11 AT2G36040.1
AT2G36040

Chr3_+_17311672 1.10 AT3G46990.1
AT3G46990
DUF740 family protein, putative (DUF740)
Chr1_+_30383561 1.10 AT1G80840.1
WRKY40
WRKY DNA-binding protein 40
Chr2_-_10439469 1.10 AT2G24570.1
WRKY17
WRKY DNA-binding protein 17
Chr2_+_8183638 1.09 AT2G18890.1
AT2G18890.3
AT2G18890
Protein kinase superfamily protein
Chr5_+_6138927 1.09 AT5G18500.6
AT5G18500
Protein kinase superfamily protein
Chr4_+_14259141 1.09 AT4G28900.1
AT4G28900

Chr1_-_29540865 1.09 AT1G78530.1
AT1G78530.2
AT1G78530
Protein kinase superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G52830

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 2.9 GO:0006428 isoleucyl-tRNA aminoacylation(GO:0006428)
0.9 8.4 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.6 3.2 GO:1903175 fatty alcohol biosynthetic process(GO:1903175)
0.5 1.6 GO:0006434 seryl-tRNA aminoacylation(GO:0006434) selenocysteinyl-tRNA(Sec) biosynthetic process(GO:0097056)
0.5 2.6 GO:0090030 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.5 1.6 GO:0010198 synergid death(GO:0010198)
0.5 3.2 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.5 3.2 GO:1904278 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.5 2.3 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.4 2.1 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.4 2.5 GO:0043290 sesquiterpenoid catabolic process(GO:0016107) apocarotenoid catabolic process(GO:0043290) abscisic acid catabolic process(GO:0046345)
0.4 2.5 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
0.4 3.3 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.4 3.2 GO:1902299 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.4 1.5 GO:0032260 response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance(GO:0032260)
0.4 1.5 GO:0090172 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation(GO:0051316) attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation(GO:0051455) microtubule cytoskeleton organization involved in homologous chromosome segregation(GO:0090172)
0.4 1.5 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116) positive regulation of alcohol biosynthetic process(GO:1902932)
0.4 1.4 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.4 1.4 GO:0015959 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.3 1.4 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.3 2.4 GO:0016120 carotene biosynthetic process(GO:0016120)
0.3 2.0 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.3 1.0 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.3 1.9 GO:0043480 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.3 1.3 GO:0006423 cysteinyl-tRNA aminoacylation(GO:0006423)
0.3 4.6 GO:0030497 fatty acid elongation(GO:0030497)
0.3 5.2 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.3 1.5 GO:0042549 photosystem II stabilization(GO:0042549)
0.3 0.9 GO:0010184 cytokinin transport(GO:0010184)
0.3 0.9 GO:0006059 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.3 1.1 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.3 1.7 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.3 1.7 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.3 2.5 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.3 0.8 GO:0000914 assembly of actomyosin apparatus involved in cytokinesis(GO:0000912) phragmoplast assembly(GO:0000914) assembly of actomyosin apparatus involved in mitotic cytokinesis(GO:1902407)
0.3 0.8 GO:0002009 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.3 3.7 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.3 1.8 GO:0009099 valine biosynthetic process(GO:0009099)
0.2 0.7 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
0.2 0.7 GO:0080140 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.2 0.9 GO:1901334 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.2 0.9 GO:0048200 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.2 3.2 GO:0010052 guard cell differentiation(GO:0010052)
0.2 1.1 GO:0009806 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.2 1.4 GO:0048629 trichome patterning(GO:0048629)
0.2 0.4 GO:0010376 stomatal complex formation(GO:0010376)
0.2 2.7 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.2 1.3 GO:0000212 meiotic spindle organization(GO:0000212)
0.2 0.7 GO:0009915 phloem sucrose loading(GO:0009915)
0.2 1.5 GO:0010155 regulation of proton transport(GO:0010155)
0.2 0.9 GO:0050993 dimethylallyl diphosphate biosynthetic process(GO:0050992) dimethylallyl diphosphate metabolic process(GO:0050993)
0.2 0.6 GO:0010045 response to nickel cation(GO:0010045)
0.2 1.1 GO:0006788 heme oxidation(GO:0006788)
0.2 2.7 GO:0010413 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.2 1.0 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.2 0.6 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.2 2.6 GO:0009554 megasporogenesis(GO:0009554)
0.2 1.0 GO:0006723 cuticle hydrocarbon biosynthetic process(GO:0006723)
0.2 0.6 GO:0046499 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.2 2.0 GO:0010047 fruit dehiscence(GO:0010047)
0.2 0.5 GO:1905181 regulation of urease activity(GO:1905181) positive regulation of urease activity(GO:1905182)
0.2 1.1 GO:0031507 heterochromatin assembly(GO:0031507)
0.2 0.7 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.2 0.9 GO:0019745 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.2 0.7 GO:0015675 nickel cation transport(GO:0015675)
0.2 0.5 GO:0010446 response to alkaline pH(GO:0010446)
0.2 1.0 GO:0071492 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.2 1.2 GO:0080117 secondary growth(GO:0080117)
0.2 1.2 GO:0072337 modified amino acid transport(GO:0072337)
0.2 1.6 GO:0033619 membrane protein proteolysis(GO:0033619)
0.2 0.5 GO:0071421 manganese ion transmembrane transport(GO:0071421)
0.2 1.1 GO:0010306 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.2 1.2 GO:0034471 rRNA 5'-end processing(GO:0000967) ncRNA 5'-end processing(GO:0034471)
0.2 3.7 GO:0010025 wax biosynthetic process(GO:0010025)
0.1 1.2 GO:0007130 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.1 0.6 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.1 1.1 GO:0042659 regulation of cell fate specification(GO:0042659)
0.1 0.7 GO:0033386 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.1 0.5 GO:0019427 acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.1 1.3 GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0019288)
0.1 1.0 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.1 0.6 GO:0010683 tricyclic triterpenoid metabolic process(GO:0010683)
0.1 0.7 GO:2000114 regulation of establishment of cell polarity(GO:2000114)
0.1 0.5 GO:0090603 sieve element differentiation(GO:0090603)
0.1 0.4 GO:0097298 regulation of nucleus size(GO:0097298)
0.1 0.8 GO:0015837 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.1 2.8 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.1 1.3 GO:0080144 amino acid homeostasis(GO:0080144)
0.1 0.9 GO:0006376 mRNA splice site selection(GO:0006376)
0.1 2.4 GO:0042335 cuticle development(GO:0042335)
0.1 1.1 GO:0050691 regulation of defense response to virus by host(GO:0050691)
0.1 0.8 GO:0010067 procambium histogenesis(GO:0010067)
0.1 1.0 GO:0043155 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.1 2.0 GO:0009086 methionine biosynthetic process(GO:0009086)
0.1 0.7 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.1 1.0 GO:1902408 preprophase band assembly(GO:0000913) cytokinesis, site selection(GO:0007105) mitotic cytokinesis, site selection(GO:1902408)
0.1 0.3 GO:0006420 arginyl-tRNA aminoacylation(GO:0006420)
0.1 0.7 GO:0032351 negative regulation of hormone metabolic process(GO:0032351) negative regulation of auxin metabolic process(GO:0090356)
0.1 0.3 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.1 1.4 GO:0000105 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.1 1.0 GO:1901348 positive regulation of secondary cell wall biogenesis(GO:1901348)
0.1 1.4 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.1 1.0 GO:0010267 production of ta-siRNAs involved in RNA interference(GO:0010267)
0.1 0.2 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.1 2.3 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.1 0.6 GO:0007021 tubulin complex assembly(GO:0007021)
0.1 0.8 GO:0036260 7-methylguanosine RNA capping(GO:0009452) RNA capping(GO:0036260)
0.1 1.2 GO:0051346 negative regulation of hydrolase activity(GO:0051346)
0.1 0.7 GO:0080028 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.1 0.4 GO:0046938 phytochelatin metabolic process(GO:0046937) phytochelatin biosynthetic process(GO:0046938) cellular response to cadmium ion(GO:0071276) cellular detoxification of cadmium ion(GO:0098849)
0.1 1.9 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.1 1.4 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.1 0.3 GO:0046622 positive regulation of organ growth(GO:0046622)
0.1 1.5 GO:0031145 anaphase-promoting complex-dependent catabolic process(GO:0031145)
0.1 0.5 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.1 1.0 GO:0032409 regulation of transporter activity(GO:0032409)
0.1 1.0 GO:0010274 hydrotropism(GO:0010274)
0.1 0.6 GO:0071249 cellular response to nitrate(GO:0071249)
0.1 1.1 GO:0048829 root cap development(GO:0048829)
0.1 0.3 GO:0006024 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203) UDP-glucuronate metabolic process(GO:0046398)
0.1 1.1 GO:0010152 pollen maturation(GO:0010152)
0.1 0.7 GO:0051446 positive regulation of meiotic cell cycle(GO:0051446)
0.1 0.4 GO:0009942 longitudinal axis specification(GO:0009942)
0.1 1.4 GO:0045492 xylan biosynthetic process(GO:0045492)
0.1 1.4 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.1 1.7 GO:0016132 phytosteroid biosynthetic process(GO:0016129) brassinosteroid biosynthetic process(GO:0016132)
0.1 1.1 GO:0015743 malate transport(GO:0015743)
0.1 0.4 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.1 0.6 GO:0018202 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.1 0.7 GO:0015918 sterol transport(GO:0015918)
0.1 0.5 GO:0016584 nucleosome positioning(GO:0016584)
0.1 0.6 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.1 1.9 GO:0016126 sterol biosynthetic process(GO:0016126)
0.1 0.8 GO:0045839 negative regulation of mitotic nuclear division(GO:0045839)
0.1 0.8 GO:0007008 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.1 0.4 GO:0009240 isopentenyl diphosphate biosynthetic process(GO:0009240) isopentenyl diphosphate biosynthetic process, mevalonate pathway(GO:0019287) isopentenyl diphosphate metabolic process(GO:0046490)
0.1 3.5 GO:0007018 microtubule-based movement(GO:0007018)
0.1 2.4 GO:0006635 fatty acid beta-oxidation(GO:0006635)
0.0 1.1 GO:0030148 sphingolipid biosynthetic process(GO:0030148)
0.0 0.2 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.0 1.6 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 1.4 GO:0006284 base-excision repair(GO:0006284)
0.0 4.7 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.0 2.7 GO:0042752 regulation of circadian rhythm(GO:0042752)
0.0 0.9 GO:0006270 DNA replication initiation(GO:0006270)
0.0 0.6 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.0 1.0 GO:0010584 pollen exine formation(GO:0010584)
0.0 0.9 GO:0010207 photosystem II assembly(GO:0010207)
0.0 0.3 GO:0045003 double-strand break repair via synthesis-dependent strand annealing(GO:0045003)
0.0 3.6 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.8 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.0 0.6 GO:0006022 aminoglycan metabolic process(GO:0006022)
0.0 0.2 GO:1990778 protein localization to plasma membrane(GO:0072659) protein localization to cell periphery(GO:1990778)
0.0 0.1 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.0 0.9 GO:0048768 root hair cell tip growth(GO:0048768)
0.0 0.1 GO:0015854 adenine transport(GO:0015853) guanine transport(GO:0015854)
0.0 0.7 GO:0006301 postreplication repair(GO:0006301)
0.0 0.5 GO:0034472 snRNA 3'-end processing(GO:0034472)
0.0 0.1 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.0 0.5 GO:0042793 transcription from plastid promoter(GO:0042793)
0.0 0.9 GO:0030641 regulation of cellular pH(GO:0030641) regulation of intracellular pH(GO:0051453)
0.0 0.6 GO:0060627 regulation of vesicle-mediated transport(GO:0060627)
0.0 0.2 GO:0006893 Golgi to plasma membrane transport(GO:0006893)
0.0 0.2 GO:0007231 osmosensory signaling pathway(GO:0007231)
0.0 1.3 GO:0009958 positive gravitropism(GO:0009958)
0.0 0.3 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.0 0.6 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 1.5 GO:0006418 tRNA aminoacylation for protein translation(GO:0006418)
0.0 0.3 GO:0009610 response to symbiotic fungus(GO:0009610)
0.0 0.6 GO:0010215 cellulose microfibril organization(GO:0010215)
0.0 0.8 GO:0009685 gibberellin metabolic process(GO:0009685) gibberellin biosynthetic process(GO:0009686)
0.0 0.2 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.0 1.0 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 0.3 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.0 0.2 GO:0005980 glycogen catabolic process(GO:0005980)
0.0 2.2 GO:0006887 exocytosis(GO:0006887)
0.0 0.6 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.0 0.8 GO:0051260 protein homooligomerization(GO:0051260)
0.0 0.3 GO:0030488 tRNA methylation(GO:0030488)
0.0 0.6 GO:2000008 regulation of protein localization to cell surface(GO:2000008)
0.0 1.4 GO:0046916 cellular transition metal ion homeostasis(GO:0046916)
0.0 0.6 GO:0010492 maintenance of shoot apical meristem identity(GO:0010492)
0.0 0.5 GO:0015937 coenzyme A biosynthetic process(GO:0015937)
0.0 0.3 GO:0016104 triterpenoid biosynthetic process(GO:0016104)
0.0 0.5 GO:0006814 sodium ion transport(GO:0006814)
0.0 0.3 GO:0098657 import into cell(GO:0098657)
0.0 1.0 GO:0010027 thylakoid membrane organization(GO:0010027)
0.0 1.4 GO:0010102 post-embryonic root morphogenesis(GO:0010101) lateral root morphogenesis(GO:0010102)
0.0 0.3 GO:0006734 NADH metabolic process(GO:0006734)
0.0 0.1 GO:0006741 NADP biosynthetic process(GO:0006741)
0.0 0.1 GO:0017014 protein nitrosylation(GO:0017014) peptidyl-cysteine S-nitrosylation(GO:0018119) peptidyl-cysteine S-trans-nitrosylation(GO:0035606)
0.0 0.9 GO:0000122 negative regulation of transcription from RNA polymerase II promoter(GO:0000122)
0.0 0.2 GO:0033517 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.0 0.8 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 0.8 GO:0042255 ribosome assembly(GO:0042255)
0.0 0.2 GO:0061687 detoxification of inorganic compound(GO:0061687)
0.0 0.0 GO:1904589 regulation of protein targeting(GO:1903533) regulation of protein import(GO:1904589)
0.0 0.1 GO:0046519 sphingoid metabolic process(GO:0046519)
0.0 0.1 GO:0010540 basipetal auxin transport(GO:0010540)
0.0 0.2 GO:0009785 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.0 3.4 GO:0009657 plastid organization(GO:0009657)
0.0 0.3 GO:0080022 primary root development(GO:0080022)
0.0 1.0 GO:0009630 gravitropism(GO:0009630)
0.0 0.7 GO:0006368 transcription elongation from RNA polymerase II promoter(GO:0006368)
0.0 0.3 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.0 0.4 GO:0008360 regulation of cell shape(GO:0008360)
0.0 0.5 GO:0048510 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0 0.5 GO:0071472 cellular response to salt stress(GO:0071472)
0.0 0.1 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.0 1.1 GO:0043086 negative regulation of catalytic activity(GO:0043086)
0.0 0.2 GO:1900865 chloroplast RNA modification(GO:1900865)
0.0 0.2 GO:0051865 protein autoubiquitination(GO:0051865)
0.0 0.2 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.0 0.5 GO:0009694 jasmonic acid metabolic process(GO:0009694)
0.0 0.4 GO:0009682 induced systemic resistance(GO:0009682)
0.0 0.8 GO:0042445 hormone metabolic process(GO:0042445)
0.0 0.1 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.0 0.3 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.0 0.1 GO:0060429 epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855) epithelium development(GO:0060429)
0.0 0.9 GO:0006260 DNA replication(GO:0006260)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 4.4 GO:0042555 MCM complex(GO:0042555)
0.3 2.6 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.3 2.2 GO:0000798 nuclear cohesin complex(GO:0000798) mitotic cohesin complex(GO:0030892) meiotic cohesin complex(GO:0030893) nuclear mitotic cohesin complex(GO:0034990) nuclear meiotic cohesin complex(GO:0034991)
0.3 0.9 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.2 1.1 GO:0005719 nuclear euchromatin(GO:0005719)
0.2 0.7 GO:0005652 nuclear lamina(GO:0005652)
0.2 1.8 GO:0030139 endocytic vesicle(GO:0030139)
0.2 1.8 GO:0016272 prefoldin complex(GO:0016272)
0.2 1.5 GO:0009538 photosystem I reaction center(GO:0009538)
0.2 1.6 GO:0071556 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.2 0.7 GO:0032044 DSIF complex(GO:0032044)
0.2 1.0 GO:0009346 citrate lyase complex(GO:0009346)
0.1 0.7 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.1 1.5 GO:0048226 Casparian strip(GO:0048226)
0.1 0.3 GO:0030132 clathrin coat of coated pit(GO:0030132)
0.1 2.5 GO:0009574 preprophase band(GO:0009574)
0.1 3.8 GO:0010319 stromule(GO:0010319)
0.1 2.1 GO:0005871 kinesin complex(GO:0005871)
0.1 1.2 GO:0000124 SAGA complex(GO:0000124)
0.1 0.8 GO:0001401 mitochondrial sorting and assembly machinery complex(GO:0001401)
0.1 0.4 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778)
0.1 9.8 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.1 0.6 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.1 0.5 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 0.7 GO:0072686 mitotic spindle(GO:0072686)
0.0 0.4 GO:0035619 root hair tip(GO:0035619)
0.0 1.3 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 0.8 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.9 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.0 1.9 GO:0010287 plastoglobule(GO:0010287)
0.0 0.3 GO:0009503 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.0 0.1 GO:0070847 core mediator complex(GO:0070847)
0.0 1.4 GO:0009524 phragmoplast(GO:0009524)
0.0 0.7 GO:0016324 apical plasma membrane(GO:0016324)
0.0 17.5 GO:0009941 chloroplast envelope(GO:0009941)
0.0 0.3 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.0 0.3 GO:0031965 nuclear membrane(GO:0031965)
0.0 0.9 GO:0000145 exocyst(GO:0000145)
0.0 0.2 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.0 1.2 GO:0005811 lipid particle(GO:0005811)
0.0 0.4 GO:0009986 cell surface(GO:0009986)
0.0 14.5 GO:0044434 chloroplast part(GO:0044434)
0.0 2.7 GO:0015934 large ribosomal subunit(GO:0015934)
0.0 3.7 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.3 GO:0000786 nucleosome(GO:0000786)
0.0 0.2 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 3.2 GO:0043140 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
1.0 4.1 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
1.0 2.9 GO:0004822 isoleucine-tRNA ligase activity(GO:0004822)
0.7 6.6 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.7 8.4 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.6 3.2 GO:0042084 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.6 2.4 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.5 4.9 GO:0009922 fatty acid elongase activity(GO:0009922)
0.5 1.6 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.5 2.1 GO:0009885 transmembrane receptor histidine kinase activity(GO:0009784) transmembrane histidine kinase cytokinin receptor activity(GO:0009885)
0.5 2.5 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.5 2.5 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.4 1.3 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.3 1.3 GO:0019156 isoamylase activity(GO:0019156)
0.3 2.2 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.3 1.3 GO:0004817 cysteine-tRNA ligase activity(GO:0004817)
0.3 5.6 GO:0102337 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.3 2.5 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.3 1.8 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.3 2.0 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.3 0.9 GO:0004452 isopentenyl-diphosphate delta-isomerase activity(GO:0004452)
0.3 1.4 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.3 1.7 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.3 1.6 GO:0004312 fatty acid synthase activity(GO:0004312)
0.3 2.3 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.2 1.0 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.2 1.0 GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.2 1.9 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.2 0.7 GO:1990465 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.2 1.4 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.2 1.8 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.2 1.1 GO:0035197 siRNA binding(GO:0035197)
0.2 2.3 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.2 1.2 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.2 0.6 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.2 1.6 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.2 4.6 GO:0004565 beta-galactosidase activity(GO:0004565)
0.2 1.6 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.2 1.4 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.2 1.0 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.2 0.5 GO:0043812 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.2 1.3 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.2 2.1 GO:1990939 ATP-dependent microtubule motor activity(GO:1990939)
0.2 1.6 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.2 1.4 GO:0004096 catalase activity(GO:0004096)
0.2 1.7 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.2 0.6 GO:0035241 protein-arginine omega-N monomethyltransferase activity(GO:0035241)
0.2 1.2 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.1 2.5 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.7 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.1 0.6 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.1 1.1 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.1 0.6 GO:0016753 sinapoyltransferase activity(GO:0016752) O-sinapoyltransferase activity(GO:0016753)
0.1 0.9 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 1.6 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.1 1.3 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.1 1.4 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 2.9 GO:0016168 chlorophyll binding(GO:0016168)
0.1 0.4 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.1 1.2 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.1 0.5 GO:0016676 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.1 1.2 GO:0003905 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.1 0.3 GO:0004814 arginine-tRNA ligase activity(GO:0004814)
0.1 0.7 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.1 0.5 GO:0004594 pantothenate kinase activity(GO:0004594)
0.1 0.5 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.1 1.3 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 0.5 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.1 1.2 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.1 1.3 GO:0031420 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.1 0.8 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.1 1.8 GO:0042300 beta-amyrin synthase activity(GO:0042300)
0.1 0.5 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.1 1.3 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.1 4.9 GO:0016866 intramolecular transferase activity(GO:0016866)
0.1 1.0 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.1 0.1 GO:0000295 adenine nucleotide transmembrane transporter activity(GO:0000295) purine nucleotide transmembrane transporter activity(GO:0015216)
0.1 0.8 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.1 0.5 GO:0016151 nickel cation binding(GO:0016151)
0.1 2.4 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.1 2.0 GO:0008810 cellulase activity(GO:0008810)
0.1 2.8 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 0.7 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.1 0.4 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.1 2.9 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.1 3.9 GO:0003777 microtubule motor activity(GO:0003777)
0.1 0.9 GO:0030674 protein binding, bridging(GO:0030674)
0.1 0.2 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.1 1.2 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.1 1.9 GO:0009975 cyclase activity(GO:0009975)
0.1 0.5 GO:0008131 primary amine oxidase activity(GO:0008131) quinone binding(GO:0048038)
0.1 0.7 GO:0004161 dimethylallyltranstransferase activity(GO:0004161)
0.1 0.4 GO:0016731 oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor(GO:0016731)
0.1 1.2 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.1 3.8 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.1 0.3 GO:0097001 sphingolipid binding(GO:0046625) ceramide binding(GO:0097001)
0.1 0.2 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.1 2.2 GO:0071949 FAD binding(GO:0071949)
0.1 0.5 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.1 0.3 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.1 0.4 GO:0052634 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.1 0.7 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.0 0.6 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.0 0.3 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.0 0.7 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.0 0.4 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.0 0.1 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.0 0.4 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.0 1.9 GO:0008171 O-methyltransferase activity(GO:0008171)
0.0 0.8 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 2.6 GO:0015211 purine nucleoside transmembrane transporter activity(GO:0015211)
0.0 0.6 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 3.3 GO:0008017 microtubule binding(GO:0008017)
0.0 0.2 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.0 0.1 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.0 0.3 GO:0019158 glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.0 0.6 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.1 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.0 0.2 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.3 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.0 0.6 GO:0015631 tubulin binding(GO:0015631)
0.0 0.4 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.0 0.6 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 0.2 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.0 0.3 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.0 0.6 GO:0003725 double-stranded RNA binding(GO:0003725)
0.0 0.3 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.0 0.2 GO:0004467 long-chain fatty acid-CoA ligase activity(GO:0004467) decanoate--CoA ligase activity(GO:0102391)
0.0 0.4 GO:0008409 5'-3' exonuclease activity(GO:0008409)
0.0 0.8 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.0 0.3 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.0 9.6 GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding(GO:0000981)
0.0 0.3 GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters(GO:0016888)
0.0 1.8 GO:0004180 carboxypeptidase activity(GO:0004180)
0.0 1.7 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 0.1 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.0 0.4 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.0 0.3 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 4.0 GO:0016614 oxidoreductase activity, acting on CH-OH group of donors(GO:0016614)
0.0 1.1 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.6 GO:0080032 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 1.6 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.0 0.9 GO:0004812 aminoacyl-tRNA ligase activity(GO:0004812) ligase activity, forming carbon-oxygen bonds(GO:0016875) ligase activity, forming aminoacyl-tRNA and related compounds(GO:0016876)
0.0 0.5 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.2 GO:0010429 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.0 0.1 GO:0001653 peptide receptor activity(GO:0001653)
0.0 0.4 GO:0034594 phosphatidylinositol trisphosphate phosphatase activity(GO:0034594)
0.0 0.1 GO:0017050 D-erythro-sphingosine kinase activity(GO:0017050)
0.0 0.2 GO:0070300 phosphatidic acid binding(GO:0070300)
0.0 0.3 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 0.3 GO:0030276 clathrin binding(GO:0030276)
0.0 0.4 GO:0010181 FMN binding(GO:0010181)
0.0 0.6 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 1.1 GO:0003724 RNA helicase activity(GO:0003724)
0.0 1.1 GO:0015144 carbohydrate transmembrane transporter activity(GO:0015144)
0.0 0.2 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 0.7 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 0.1 GO:0033744 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.0 1.4 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.5 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.1 GO:0001085 RNA polymerase II transcription factor binding(GO:0001085)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 3.2 NABA SECRETED FACTORS Genes encoding secreted soluble factors
0.3 2.0 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.1 0.9 PID ATM PATHWAY ATM pathway
0.1 0.7 PID E2F PATHWAY E2F transcription factor network
0.1 0.4 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 3.2 REACTOME PROLACTIN RECEPTOR SIGNALING Genes involved in Prolactin receptor signaling
0.4 2.2 REACTOME DOPAMINE NEUROTRANSMITTER RELEASE CYCLE Genes involved in Dopamine Neurotransmitter Release Cycle
0.3 1.6 REACTOME PHASE II CONJUGATION Genes involved in Phase II conjugation
0.3 1.5 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.2 2.2 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.2 0.9 REACTOME MEIOTIC SYNAPSIS Genes involved in Meiotic Synapsis
0.2 0.7 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.2 2.8 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.1 0.4 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.1 0.9 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.0 0.1 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation