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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G52660

Z-value: 0.93

Transcription factors associated with AT5G52660

Gene Symbol Gene ID Gene Info
AT5G52660
AT5G52660 Homeodomain-like superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT5G52660arTal_v1_Chr5_-_21362160_213622730.384.6e-02Click!

Activity profile of AT5G52660 motif

Sorted Z-values of AT5G52660 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_-_21189859 1.96 AT3G57260.1
AT3G57260.2
BGL2
beta-1,3-glucanase 2
Chr1_-_5133860 1.58 AT1G14880.1
PCR1
PLANT CADMIUM RESISTANCE 1
Chr3_+_11033665 1.57 AT3G29035.1
NAC3
NAC domain containing protein 3
Chr5_-_9247540 1.52 AT5G26340.1
MSS1
Major facilitator superfamily protein
Chr4_+_6491017 1.44 AT4G10500.1
AT4G10500
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr2_-_11295918 1.41 AT2G26560.1
PLA2A
phospholipase A 2A
Chr3_+_5234457 1.40 AT3G15500.1
NAC3
NAC domain containing protein 3
Chr5_-_7828724 1.35 AT5G23240.1
AT5G23240
DNAJ heat shock N-terminal domain-containing protein
Chr1_+_30150897 1.34 AT1G80160.3
AT1G80160.1
AT1G80160.2
GLYI7
Lactoylglutathione lyase / glyoxalase I family protein
Chr1_-_3756998 1.33 AT1G11210.1
AT1G11210
cotton fiber protein, putative (DUF761)
Chr4_+_15828228 1.33 AT4G32810.1
AT4G32810.2
CCD8
carotenoid cleavage dioxygenase 8
Chr3_-_1055196 1.32 AT3G04060.1
NAC046
NAC domain containing protein 46
Chr1_-_19698482 1.31 AT1G52890.1
NAC019
NAC domain containing protein 19
Chr5_+_7718118 1.29 AT5G23020.1
IMS2
2-isopropylmalate synthase 2
Chr5_+_3358787 1.28 AT5G10625.1
AT5G10625
flowering-promoting factor-like protein
Chr2_-_13101371 1.23 AT2G30750.1
CYP71A12
cytochrome P450 family 71 polypeptide
Chr4_+_7304323 1.18 AT4G12290.2
AT4G12290
Copper amine oxidase family protein
Chr1_+_7949476 1.17 AT1G22500.1
ATL15
RING/U-box superfamily protein
Chr4_+_7303985 1.17 AT4G12290.1
AT4G12290
Copper amine oxidase family protein
Chr5_-_216773 1.15 AT5G01550.1
LECRKA4.2
lectin receptor kinase a4.1
Chr3_+_18634546 1.14 AT3G50260.1
CEJ1
cooperatively regulated by ethylene and jasmonate 1
Chr1_+_28740540 1.11 AT1G76590.1
AT1G76590
PLATZ transcription factor family protein
Chr3_-_2890520 1.11 AT3G09390.2
AT3G09390.1
MT2A
metallothionein 2A
Chr2_-_19166949 1.10 AT2G46680.2
AT2G46680.1
HB-7
homeobox 7
Chr5_-_5759817 1.09 AT5G17460.3
AT5G17460.2
AT5G17460.1
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
Chr4_-_8095749 1.09 AT4G14020.1
AT4G14020
Rapid alkalinization factor (RALF) family protein
Chr4_+_9407611 1.07 AT4G16740.4
AT4G16740.3
AT4G16740.1
TPS03
terpene synthase 03
Chr5_-_2652535 1.07 AT5G08240.1
AT5G08240
transmembrane protein
Chr1_+_26651840 1.07 AT1G70690.1
HWI1
Receptor-like protein kinase-related family protein
Chr4_-_16102196 1.07 AT4G33467.1
AT4G33467.2
AT4G33467
hypothetical protein
Chr3_+_22216540 1.06 AT3G60140.2
AT3G60140.1
DIN2
Glycosyl hydrolase superfamily protein
Chr1_-_977761 1.06 AT1G03850.1
AT1G03850.2
AT1G03850.3
GRXS13
Glutaredoxin family protein
Chr5_+_15501126 1.05 AT5G38710.1
AT5G38710.2
AT5G38710
Methylenetetrahydrofolate reductase family protein
Chr4_-_14393381 1.05 AT4G29190.1
OZF2
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr5_+_23003909 1.05 AT5G56870.1
BGAL4
beta-galactosidase 4
Chr3_+_21380648 1.05 AT3G57680.1
AT3G57680.2
AT3G57680
Peptidase S41 family protein
Chr5_-_8659352 1.04 AT5G25110.1
CIPK25
CBL-interacting protein kinase 25
Chr3_-_1063103 1.03 AT3G04070.2
AT3G04070.1
NAC047
NAC domain containing protein 47
Chr2_-_1548999 1.01 AT2G04460.1
AT2G04460

Chr3_-_1776840 1.00 AT3G05937.1
AT3G05937
hypothetical protein
Chr3_+_18465318 1.00 AT3G49780.1
PSK4
phytosulfokine 4 precursor
Chr4_+_15862117 0.99 AT4G32870.1
AT4G32870
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr1_+_21652988 0.98 AT1G58340.1
ZF14
MATE efflux family protein
Chr3_-_4079627 0.98 AT3G12830.1
AT3G12830
SAUR-like auxin-responsive protein family
Chr1_-_19443624 0.97 AT1G52200.1
AT1G52200.2
AT1G52200
PLAC8 family protein
Chr3_+_23135630 0.96 AT3G62550.1
AT3G62550
Adenine nucleotide alpha hydrolases-like superfamily protein
Chr3_+_1635194 0.96 AT3G05630.1
PLDP2
phospholipase D P2
Chr1_-_9848015 0.95 AT1G28190.1
AT1G28190
hypothetical protein
Chr2_-_12149072 0.94 AT2G28400.1
AT2G28400
senescence regulator (Protein of unknown function, DUF584)
Chr4_+_12461907 0.93 AT4G24000.1
CSLG2
cellulose synthase like G2
Chr5_-_19060121 0.93 AT5G46950.1
AT5G46950
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_-_2346862 0.92 AT1G07620.3
AT1G07620.2
AT1G07620.1
ATOBGM
GTP-binding protein Obg/CgtA
Chr1_-_1547798 0.91 AT1G05300.2
AT1G05300.1
ZIP5
zinc transporter 5 precursor
Chr1_-_27755297 0.90 AT1G73810.1
AT1G73810
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Chr3_+_9887917 0.90 AT3G26830.1
PAD3
Cytochrome P450 superfamily protein
Chr5_+_4213955 0.90 AT5G13210.1
AT5G13210
Uncharacterized conserved protein UCP015417, vWA
Chr5_-_4933620 0.90 AT5G15190.2
AT5G15190.1
AT5G15190
hypothetical protein
Chr4_-_13019400 0.89 AT4G25480.1
DREB1A
dehydration response element B1A
Chr1_+_2341447 0.89 AT1G07610.1
MT1C
metallothionein 1C
Chr5_+_6424779 0.89 AT5G19140.3
AILP1
aluminum induced protein with YGL and LRDR motifs
Chr1_-_2163387 0.88 AT1G07040.1
AT1G07040
plant/protein
Chr2_-_11980003 0.87 AT2G28110.1
FRA8
Exostosin family protein
Chr1_-_19789029 0.87 AT1G53100.2
AT1G53100.1
AT1G53100
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Chr4_+_10398857 0.87 AT4G18980.1
AtS40-3
AtS40-3
Chr4_-_10714745 0.86 AT4G19700.1
RING
SBP (S-ribonuclease binding protein) family protein
Chr3_-_10047453 0.86 AT3G27210.1
AT3G27210
hypothetical protein
Chr2_-_19330197 0.86 AT2G47040.1
VGD1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr5_-_17994584 0.86 AT5G44610.3
AT5G44610.2
AT5G44610.1
MAP18
microtubule-associated protein 18
Chr4_+_12741032 0.85 AT4G24690.1
NBR1
ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein
Chr2_-_7910040 0.85 AT2G18170.1
MPK7
MAP kinase 7
Chr3_+_21381599 0.85 AT3G57680.3
AT3G57680
Peptidase S41 family protein
Chr3_+_4346330 0.85 AT3G13380.1
BRL3
BRI1-like 3
Chr4_+_12463312 0.85 AT4G24000.2
CSLG2
cellulose synthase like G2
Chr2_-_14310608 0.84 AT2G33830.2
AT2G33830
Dormancy/auxin associated family protein
Chr5_+_22460550 0.83 AT5G55410.2
AT5G55410.1
AT5G55410
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_+_17268700 0.83 AT3G46900.1
COPT2
copper transporter 2
Chr2_-_14310339 0.82 AT2G33830.1
AT2G33830
Dormancy/auxin associated family protein
Chr2_-_1339468 0.82 AT2G04050.1
AT2G04050
MATE efflux family protein
Chr3_+_21397542 0.82 AT3G57770.1
AT3G57770
Protein kinase superfamily protein
Chr3_+_22602816 0.82 AT3G61060.1
AT3G61060.2
PP2-A13
phloem protein 2-A13
Chr3_-_11384145 0.81 AT3G29575.1
AT3G29575.4
AT3G29575.3
AFP3
ABI five binding protein 3
Chr2_-_761013 0.80 AT2G02710.2
AT2G02710.3
AT2G02710.4
AT2G02710.1
PLPB
PAS/LOV protein B
Chr2_-_14051400 0.80 AT2G33150.1
PKT3
peroxisomal 3-ketoacyl-CoA thiolase 3
Chr3_-_19284146 0.80 AT3G51960.1
AT3G51960.2
AT3G51960.3
BZIP24
basic leucine zipper 24
Chr1_+_22824414 0.80 AT1G61800.2
AT1G61800.1
GPT2
glucose-6-phosphate/phosphate translocator 2
Chr5_-_26052717 0.80 AT5G65207.1
AT5G65207
hypothetical protein
Chr4_-_18217616 0.80 AT4G39090.1
RD19
Papain family cysteine protease
Chr2_-_9266393 0.79 AT2G21660.2
GRP7
cold, circadian rhythm, and rna binding 2
Chr1_-_25486512 0.78 AT1G67970.1
HSFA8
heat shock transcription factor A8
Chr2_-_9266557 0.78 AT2G21660.1
GRP7
cold, circadian rhythm, and rna binding 2
Chr1_-_4577967 0.78 AT1G13360.2
AT1G13360.3
AT1G13360
hypothetical protein
Chr3_+_815550 0.78 AT3G03440.1
AT3G03440
ARM repeat superfamily protein
Chr1_-_4578369 0.77 AT1G13360.1
AT1G13360
hypothetical protein
Chr5_-_8358546 0.77 AT5G24470.1
PRR5
two-component response regulator-like protein
Chr2_+_9254378 0.77 AT2G21640.1
AT2G21640
marker for oxidative stress response protein
Chr1_-_24558322 0.77 AT1G65970.1
TPX2
thioredoxin-dependent peroxidase 2
Chr5_+_6423153 0.76 AT5G19140.2
AT5G19140.1
AILP1
aluminum induced protein with YGL and LRDR motifs
Chr5_+_579744 0.76 AT5G02580.1
AT5G02580.3
AT5G02580.2
AT5G02580
argininosuccinate lyase
Chr1_+_18400003 0.76 AT1G49720.1
AT1G49720.2
AT1G49720.3
ABF1
abscisic acid responsive element-binding factor 1
Chr3_-_19165322 0.75 AT3G51660.1
AT3G51660
Tautomerase/MIF superfamily protein
Chr5_-_17358340 0.75 AT5G43260.1
AT5G43260
chaperone protein dnaJ-like protein
Chr5_-_19807853 0.75 AT5G48850.1
ATSDI1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_16466144 0.75 AT3G45010.1
scpl48
serine carboxypeptidase-like 48
Chr4_-_11585391 0.73 AT4G21830.2
MSRB7
methionine sulfoxide reductase B7
Chr5_-_22312832 0.73 AT5G54960.1
PDC2
pyruvate decarboxylase-2
Chr4_+_9407768 0.73 AT4G16740.2
TPS03
terpene synthase 03
Chr5_+_91786 0.73 AT5G01225.1
AT5G01225
josephin-like protein
Chr1_-_22715448 0.73 AT1G61563.1
RALFL8
ralf-like 8
Chr3_+_16745873 0.72 AT3G45620.1
AT3G45620.2
AT3G45620
Transducin/WD40 repeat-like superfamily protein
Chr5_-_23343415 0.71 AT5G57630.2
AT5G57630.1
CIPK21
CBL-interacting protein kinase 21
Chr1_-_17928930 0.71 AT1G48490.4
AT1G48490.2
AT1G48490.1
AT1G48490.3
AT1G48490
Protein kinase superfamily protein
Chr5_+_7116687 0.71 AT5G20960.2
AO1
aldehyde oxidase 1
Chr1_+_25865471 0.71 AT1G68820.1
AT1G68820.3
AT1G68820.2
AT1G68820
Transmembrane Fragile-X-F-associated protein
Chr3_+_7541384 0.71 AT3G21420.1
LBO1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_+_7116455 0.70 AT5G20960.1
AO1
aldehyde oxidase 1
Chr1_-_12738196 0.70 AT1G34750.3
AT1G34750.1
AT1G34750.2
AT1G34750.4
AT1G34750
Protein phosphatase 2C family protein
Chr4_-_7011406 0.70 AT4G11600.1
GPX6
glutathione peroxidase 6
Chr1_-_27466348 0.70 AT1G73010.1
PS2
inorganic pyrophosphatase 1
Chr4_-_11585542 0.70 AT4G21830.1
MSRB7
methionine sulfoxide reductase B7
Chr5_-_17881483 0.69 AT5G44380.1
AT5G44380.2
AT5G44380
FAD-binding Berberine family protein
Chr5_-_10213598 0.69 AT5G28237.1
AT5G28237.2
AT5G28237
Pyridoxal-5'-phosphate-dependent enzyme family protein
Chr2_+_11620076 0.69 AT2G27180.1
AT2G27180
hypothetical protein
Chr5_-_20191604 0.68 AT5G49690.1
AT5G49690
UDP-Glycosyltransferase superfamily protein
Chr1_+_6662417 0.68 AT1G19270.1
AT1G19270.2
DA1
DA1
Chr5_+_15949910 0.68 AT5G39850.1
AT5G39850
Ribosomal protein S4
Chr4_+_16340907 0.68 AT4G34120.1
LEJ1
Cystathionine beta-synthase (CBS) family protein
Chr1_-_27707518 0.68 AT1G73680.2
AT1G73680.1
ALPHA DOX2
alpha dioxygenase
Chr1_+_8688563 0.68 AT1G24520.1
BCP1
homolog of Brassica campestris pollen protein 1
Chr4_+_2445775 0.67 AT4G04830.1
AT4G04830.2
MSRB5
methionine sulfoxide reductase B5
Chr2_-_18306395 0.67 AT2G44290.1
AT2G44290
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_28991385 0.67 AT1G77145.2
AT1G77145.1
AT1G77145
transmembrane protein, putative (DUF506)
Chr1_-_18124289 0.66 AT1G49000.1
AT1G49000
transmembrane protein
Chr1_+_28975255 0.66 AT1G77120.1
ADH1
alcohol dehydrogenase 1
Chr3_-_18857040 0.66 AT3G50740.1
UGT72E1
UDP-glucosyl transferase 72E1
Chr4_-_11971203 0.66 AT4G22780.1
ACR7
ACT domain repeat 7
Chr2_-_19326484 0.66 AT2G47030.1
VGDH1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr5_-_16998925 0.66 AT5G42510.1
AT5G42510
Disease resistance-responsive (dirigent-like protein) family protein
Chr4_-_11971357 0.65 AT4G22780.2
ACR7
ACT domain repeat 7
Chr2_+_10310482 0.65 AT2G24240.1
AT2G24240
BTB/POZ domain with WD40/YVTN repeat-like protein
Chr1_+_25508639 0.65 AT1G68050.1
FKF1
flavin-binding, kelch repeat, f box 1
Chr5_+_23087122 0.65 AT5G57050.1
AT5G57050.3
AT5G57050.2
ABI2
Protein phosphatase 2C family protein
Chr5_-_26096114 0.65 AT5G65300.1
AT5G65300
hypothetical protein
Chr3_-_17362118 0.65 AT3G47160.2
AT3G47160.3
AT3G47160.1
AT3G47160
RING/U-box superfamily protein
Chr4_+_8218261 0.65 AT4G14270.2
AT4G14270
polyadenylate-binding protein interacting protein
Chr4_+_15202288 0.64 AT4G31330.1
AT4G31330
transmembrane protein, putative (Protein of unknown function, DUF599)
Chr2_-_10831655 0.64 AT2G25450.1
AT2G25450
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_-_22507879 0.64 AT5G55560.1
AT5G55560
Protein kinase superfamily protein
Chr3_-_3585850 0.64 AT3G11410.1
PP2CA
protein phosphatase 2CA
Chr4_+_8218083 0.64 AT4G14270.1
AT4G14270
polyadenylate-binding protein interacting protein
Chr5_-_20634618 0.64 AT5G50720.1
HVA22E
HVA22 homologue E
Chr1_-_23226983 0.64 AT1G62710.1
BETA-VPE
beta vacuolar processing enzyme
Chr1_-_27707213 0.64 AT1G73680.3
ALPHA DOX2
alpha dioxygenase
Chr4_+_7231819 0.64 AT4G12070.1
AT4G12070
hypothetical protein
Chr2_-_9056481 0.64 AT2G21130.1
AT2G21130
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Chr3_-_22915393 0.64 AT3G61890.1
HB-12
homeobox 12
Chr3_+_4934330 0.63 AT3G14680.1
CYP72A14
cytochrome P450, family 72, subfamily A, polypeptide 14
Chr1_-_27706617 0.63 AT1G73680.4
ALPHA DOX2
alpha dioxygenase
Chr5_+_19868926 0.63 AT5G49015.2
AT5G49015.1
AT5G49015.3
AT5G49015
Expressed protein
Chr1_-_2346430 0.63 AT1G07620.4
ATOBGM
GTP-binding protein Obg/CgtA
Chr3_+_3442237 0.62 AT3G10985.1
SAG20
senescence associated gene 20
Chr3_+_6536534 0.62 AT3G18950.1
AT3G18950
Transducin/WD40 repeat-like superfamily protein
Chr1_-_23183183 0.62 AT1G62610.4
AT1G62610.2
AT1G62610.1
AT1G62610.3
AT1G62610
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_-_172948 0.62 AT1G01470.1
LEA14
Late embryogenesis abundant protein
Chr1_+_26636110 0.62 AT1G70640.1
AT1G70640
octicosapeptide/Phox/Bem1p (PB1) domain-containing protein
Chr2_-_8447355 0.62 AT2G19500.1
CKX2
cytokinin oxidase 2
Chr2_+_14685170 0.61 AT2G34810.1
AT2G34810
FAD-binding Berberine family protein
Chr5_-_24083528 0.61 AT5G59780.2
AT5G59780.1
AT5G59780.3
MYB59
myb domain protein 59
Chr5_-_18383693 0.60 AT5G45350.2
AT5G45350.4
AT5G45350.3
AT5G45350.5
AT5G45350.7
AT5G45350
proline-rich family protein
Chr1_+_20210772 0.60 AT1G54130.1
RSH3
RELA/SPOT homolog 3
Chr2_+_7244500 0.60 AT2G16700.1
AT2G16700.3
AT2G16700.4
AT2G16700.2
ADF5
actin depolymerizing factor 5
Chr5_-_26531176 0.60 AT5G66440.1
AT5G66440
tRNA-methyltransferase non-catalytic subunit trm6MTase subunit
Chr1_-_9337759 0.60 AT1G26930.2
AT1G26930
Galactose oxidase/kelch repeat superfamily protein
Chr5_+_26864846 0.59 AT5G67340.2
AT5G67340
ARM repeat superfamily protein
Chr1_-_18477643 0.59 AT1G49900.1
AT1G49900
C2H2 type zinc finger transcription factor family
Chr3_+_458412 0.59 AT3G02290.3
AT3G02290.4
AT3G02290
RING/U-box superfamily protein
Chr3_+_8321329 0.59 AT3G23280.1
AT3G23280.2
XBAT35
hypothetical protein
Chr5_+_20090648 0.59 AT5G49520.1
WRKY48
WRKY DNA-binding protein 48
Chr4_+_5811115 0.58 AT4G09100.1
AT4G09100
RING/U-box superfamily protein
Chr1_-_23637577 0.58 AT1G63720.1
AT1G63720
hydroxyproline-rich glycoprotein family protein
Chr5_+_6802282 0.58 AT5G20150.1
SPX1
SPX domain-containing protein 1
Chr2_+_837801 0.58 AT2G02870.3
AT2G02870.1
AT2G02870.2
AT2G02870
Galactose oxidase/kelch repeat superfamily protein
Chr3_+_10456029 0.58 AT3G28100.1
AT3G28100.2
AT3G28100.3
UMAMIT45
nodulin MtN21 /EamA-like transporter family protein
Chr1_-_9337938 0.58 AT1G26930.1
AT1G26930
Galactose oxidase/kelch repeat superfamily protein
Chr5_+_23067828 0.58 AT5G57010.1
AT5G57010
calmodulin-binding family protein
Chr5_+_20949291 0.57 AT5G51570.1
AT5G51570
SPFH/Band 7/PHB domain-containing membrane-associated protein family
Chr5_-_16941734 0.57 AT5G42370.2
AT5G42370.1
AT5G42370
Calcineurin-like metallo-phosphoesterase superfamily protein
Chr5_-_18383492 0.57 AT5G45350.6
AT5G45350
proline-rich family protein
Chr2_+_15192480 0.57 AT2G36220.1
AT2G36220
hypothetical protein
Chr1_-_9778043 0.57 AT1G28050.1
BBX13
B-box type zinc finger protein with CCT domain-containing protein
Chr4_+_17882644 0.57 AT4G38080.1
AT4G38080
hydroxyproline-rich glycoprotein family protein
Chr4_-_13022996 0.57 AT4G25490.1
CBF1
C-repeat/DRE binding factor 1
Chr2_-_12796085 0.57 AT2G29990.1
NDA2
alternative NAD(P)H dehydrogenase 2
Chr5_-_17705793 0.57 AT5G44005.1
AT5G44005
hypothetical protein
Chr3_+_458741 0.56 AT3G02290.5
AT3G02290.6
AT3G02290
RING/U-box superfamily protein
Chr2_-_9991526 0.56 AT2G23450.1
AT2G23450
Protein kinase superfamily protein
Chr2_-_6922025 0.56 AT2G15890.2
AT2G15890.1
MEE14
maternal effect embryo arrest 14
Chr2_-_18919198 0.56 AT2G45980.1
ATI1
mesoderm induction early response protein
Chr5_+_26864395 0.56 AT5G67340.1
AT5G67340
ARM repeat superfamily protein
Chr1_+_5638779 0.56 AT1G16500.1
AT1G16500
filamentous hemagglutinin transporter
Chr5_-_1731090 0.56 AT5G05760.1
SYP31
syntaxin of plants 31

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G52660

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 3.0 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.5 1.6 GO:0031115 negative regulation of microtubule polymerization(GO:0031115)
0.5 1.4 GO:1902347 response to strigolactone(GO:1902347)
0.4 1.8 GO:1901336 lactone metabolic process(GO:1901334) lactone biosynthetic process(GO:1901336) strigolactone metabolic process(GO:1901600) strigolactone biosynthetic process(GO:1901601)
0.3 1.3 GO:0016098 monoterpenoid metabolic process(GO:0016098) monoterpenoid biosynthetic process(GO:0016099)
0.3 0.6 GO:0035865 cellular response to potassium ion(GO:0035865)
0.3 1.7 GO:0009413 response to flooding(GO:0009413)
0.3 0.8 GO:0010124 phenylacetate catabolic process(GO:0010124)
0.3 0.8 GO:0035606 protein nitrosylation(GO:0017014) peptidyl-cysteine S-nitrosylation(GO:0018119) peptidyl-cysteine S-trans-nitrosylation(GO:0035606)
0.3 0.8 GO:0035436 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.3 1.3 GO:1901404 regulation of chlorophyll catabolic process(GO:0010271) regulation of tetrapyrrole catabolic process(GO:1901404)
0.3 1.0 GO:0019567 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.3 0.8 GO:0090224 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.2 1.2 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.2 0.7 GO:0010446 response to alkaline pH(GO:0010446)
0.2 1.4 GO:0090059 protoxylem development(GO:0090059)
0.2 1.8 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.2 0.6 GO:0006658 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.2 0.6 GO:0046521 sphingoid catabolic process(GO:0046521)
0.2 0.6 GO:0080040 positive regulation of cellular response to phosphate starvation(GO:0080040)
0.2 0.7 GO:0019474 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.2 1.9 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.2 0.5 GO:0045002 DNA double-strand break processing involved in repair via single-strand annealing(GO:0010792) double-strand break repair via single-strand annealing(GO:0045002)
0.2 0.5 GO:0032196 transposition(GO:0032196)
0.2 0.8 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.2 2.2 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.2 1.0 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654)
0.1 1.0 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.1 1.9 GO:0010120 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.1 1.8 GO:0015749 monosaccharide transport(GO:0015749)
0.1 1.4 GO:0000304 response to singlet oxygen(GO:0000304)
0.1 0.4 GO:0015802 basic amino acid transport(GO:0015802)
0.1 0.4 GO:2000058 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.1 0.5 GO:0006182 cGMP biosynthetic process(GO:0006182) cGMP metabolic process(GO:0046068)
0.1 0.5 GO:0035494 SNARE complex disassembly(GO:0035494)
0.1 0.4 GO:0000050 urea cycle(GO:0000050)
0.1 0.5 GO:0000256 allantoin catabolic process(GO:0000256)
0.1 1.8 GO:0080027 response to herbivore(GO:0080027)
0.1 0.1 GO:0071217 response to cycloheximide(GO:0046898) cellular response to external biotic stimulus(GO:0071217) response to ketone(GO:1901654)
0.1 0.5 GO:1902914 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.1 0.4 GO:0071569 protein ufmylation(GO:0071569)
0.1 0.7 GO:0048445 carpel morphogenesis(GO:0048445)
0.1 0.3 GO:0015696 ammonium transport(GO:0015696)
0.1 0.3 GO:0051601 exocyst localization(GO:0051601)
0.1 0.4 GO:0042256 mature ribosome assembly(GO:0042256)
0.1 0.3 GO:2000001 signal transduction in response to DNA damage(GO:0042770) regulation of DNA damage checkpoint(GO:2000001)
0.1 0.1 GO:0010500 transmitting tissue development(GO:0010500)
0.1 0.6 GO:0006624 vacuolar protein processing(GO:0006624)
0.1 0.7 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.1 1.1 GO:0080183 response to photooxidative stress(GO:0080183)
0.1 0.8 GO:1901001 negative regulation of response to salt stress(GO:1901001)
0.1 0.6 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.1 1.5 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.1 0.6 GO:0015969 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.1 0.4 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.1 0.4 GO:0071836 nectar secretion(GO:0071836)
0.1 0.3 GO:0010447 response to acidic pH(GO:0010447)
0.1 1.4 GO:0009098 leucine biosynthetic process(GO:0009098)
0.1 0.3 GO:0017196 N-terminal protein amino acid acetylation(GO:0006474) N-terminal peptidyl-methionine acetylation(GO:0017196)
0.1 0.4 GO:0030259 lipid glycosylation(GO:0030259)
0.1 0.4 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.1 0.4 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.1 0.3 GO:0070536 protein K63-linked deubiquitination(GO:0070536)
0.1 0.6 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.1 0.7 GO:0045903 positive regulation of translational fidelity(GO:0045903)
0.1 1.5 GO:0031408 oxylipin biosynthetic process(GO:0031408)
0.1 0.3 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.1 0.6 GO:0019632 shikimate metabolic process(GO:0019632)
0.1 0.4 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.1 0.5 GO:0000212 meiotic spindle organization(GO:0000212)
0.1 0.6 GO:0032957 inositol trisphosphate metabolic process(GO:0032957)
0.1 0.8 GO:0010205 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.1 0.7 GO:0018107 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.1 0.5 GO:0006000 fructose metabolic process(GO:0006000)
0.1 0.8 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.1 0.3 GO:0048838 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
0.1 0.3 GO:0002119 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.1 1.7 GO:0000162 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.1 0.1 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.1 0.6 GO:0009061 anaerobic respiration(GO:0009061)
0.1 0.2 GO:0046203 spermidine catabolic process(GO:0046203)
0.1 0.4 GO:0048530 fruit morphogenesis(GO:0048530)
0.1 0.5 GO:0006882 cellular zinc ion homeostasis(GO:0006882)
0.1 0.9 GO:0010417 glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.1 0.5 GO:0031929 TOR signaling(GO:0031929)
0.1 0.3 GO:0009727 detection of ethylene stimulus(GO:0009727)
0.1 1.0 GO:0051346 negative regulation of hydrolase activity(GO:0051346)
0.1 1.0 GO:1902074 response to salt(GO:1902074)
0.1 0.3 GO:0007035 vacuolar acidification(GO:0007035) intracellular pH reduction(GO:0051452)
0.1 0.4 GO:0090548 response to nitrate starvation(GO:0090548)
0.1 0.3 GO:0016578 histone deubiquitination(GO:0016578)
0.1 0.2 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.1 1.2 GO:0006826 iron ion transport(GO:0006826)
0.1 0.4 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.1 0.2 GO:0046622 positive regulation of organ growth(GO:0046622)
0.1 0.3 GO:0010508 positive regulation of autophagy(GO:0010508)
0.1 0.2 GO:0032107 regulation of response to extracellular stimulus(GO:0032104) regulation of response to nutrient levels(GO:0032107)
0.1 0.5 GO:2000114 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920) regulation of establishment of cell polarity(GO:2000114)
0.1 0.3 GO:0010325 raffinose family oligosaccharide biosynthetic process(GO:0010325)
0.1 0.4 GO:0043266 regulation of potassium ion transport(GO:0043266)
0.1 0.2 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.0 0.4 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.0 0.2 GO:0070509 calcium ion import(GO:0070509)
0.0 1.1 GO:0006995 cellular response to nitrogen starvation(GO:0006995)
0.0 0.5 GO:0033683 nucleotide-excision repair, DNA incision(GO:0033683)
0.0 0.3 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.0 0.5 GO:0010044 response to aluminum ion(GO:0010044)
0.0 0.1 GO:0009720 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.0 0.1 GO:0015709 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.0 0.7 GO:0051262 protein tetramerization(GO:0051262)
0.0 0.2 GO:0080065 4-alpha-methyl-delta7-sterol oxidation(GO:0080065)
0.0 0.2 GO:0006361 transcription initiation from RNA polymerase I promoter(GO:0006361)
0.0 0.3 GO:0046051 UTP biosynthetic process(GO:0006228) UTP metabolic process(GO:0046051)
0.0 1.2 GO:1900424 regulation of defense response to bacterium(GO:1900424)
0.0 0.7 GO:0000165 MAPK cascade(GO:0000165)
0.0 0.3 GO:0046822 regulation of nucleocytoplasmic transport(GO:0046822)
0.0 0.3 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.0 1.4 GO:0009682 induced systemic resistance(GO:0009682)
0.0 0.3 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.0 0.9 GO:0006863 purine nucleobase transport(GO:0006863)
0.0 0.2 GO:0060866 leaf abscission(GO:0060866)
0.0 0.4 GO:0006646 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.0 0.3 GO:0008535 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.0 1.0 GO:0046834 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.0 0.7 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.0 0.6 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.0 0.2 GO:0080119 ER body organization(GO:0080119)
0.0 0.6 GO:0010193 response to ozone(GO:0010193)
0.0 0.3 GO:0070534 protein K63-linked ubiquitination(GO:0070534)
0.0 0.7 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.0 0.5 GO:0051026 chiasma assembly(GO:0051026)
0.0 0.3 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.0 1.0 GO:0071472 cellular response to salt stress(GO:0071472)
0.0 0.2 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221)
0.0 0.1 GO:0010219 regulation of vernalization response(GO:0010219)
0.0 0.5 GO:0009649 entrainment of circadian clock(GO:0009649)
0.0 0.2 GO:0015785 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.0 0.9 GO:0006914 autophagy(GO:0006914)
0.0 0.5 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.0 0.3 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 1.6 GO:0009631 cold acclimation(GO:0009631)
0.0 0.4 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.2 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.0 0.1 GO:0080058 protein deglutathionylation(GO:0080058)
0.0 6.2 GO:0071456 cellular response to hypoxia(GO:0071456)
0.0 1.3 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.0 0.9 GO:0031124 mRNA 3'-end processing(GO:0031124)
0.0 0.1 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.0 0.5 GO:0010030 positive regulation of seed germination(GO:0010030)
0.0 0.5 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 0.1 GO:0080009 mRNA methylation(GO:0080009)
0.0 0.1 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.0 0.4 GO:0046688 response to copper ion(GO:0046688)
0.0 1.3 GO:0009911 positive regulation of flower development(GO:0009911)
0.0 0.2 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.0 0.3 GO:0071545 inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.0 0.2 GO:0032456 endocytic recycling(GO:0032456)
0.0 0.4 GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway(GO:0009862)
0.0 0.1 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.0 0.1 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.0 0.1 GO:0046373 L-arabinose metabolic process(GO:0046373)
0.0 0.8 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 0.2 GO:0048830 adventitious root development(GO:0048830)
0.0 0.1 GO:1903008 organelle disassembly(GO:1903008)
0.0 0.1 GO:0070076 protein demethylation(GO:0006482) protein dealkylation(GO:0008214) histone demethylation(GO:0016577) histone lysine demethylation(GO:0070076)
0.0 0.4 GO:0010821 regulation of mitochondrion organization(GO:0010821)
0.0 0.3 GO:0052542 defense response by callose deposition(GO:0052542)
0.0 0.2 GO:0033169 histone H3-K9 demethylation(GO:0033169)
0.0 0.3 GO:0006102 isocitrate metabolic process(GO:0006102)
0.0 0.5 GO:0015850 organic hydroxy compound transport(GO:0015850)
0.0 0.3 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.0 0.4 GO:0030042 actin filament depolymerization(GO:0030042)
0.0 0.2 GO:0010396 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.0 0.3 GO:0006574 valine catabolic process(GO:0006574)
0.0 0.4 GO:0009901 anther dehiscence(GO:0009901)
0.0 0.1 GO:0043132 NAD transport(GO:0043132)
0.0 0.7 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 0.4 GO:0051260 protein homooligomerization(GO:0051260)
0.0 1.9 GO:0009734 auxin-activated signaling pathway(GO:0009734)
0.0 0.1 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.0 1.2 GO:0048544 recognition of pollen(GO:0048544)
0.0 0.3 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.0 0.3 GO:0008285 negative regulation of cell proliferation(GO:0008285)
0.0 0.3 GO:0010187 negative regulation of seed germination(GO:0010187)
0.0 0.4 GO:0030968 endoplasmic reticulum unfolded protein response(GO:0030968)
0.0 0.1 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 0.7 GO:2000028 regulation of photoperiodism, flowering(GO:2000028)
0.0 0.5 GO:0009625 response to insect(GO:0009625)
0.0 0.5 GO:0016575 histone deacetylation(GO:0016575)
0.0 0.1 GO:0010601 positive regulation of auxin biosynthetic process(GO:0010601) positive regulation of auxin metabolic process(GO:0090355)
0.0 1.1 GO:0051258 protein polymerization(GO:0051258)
0.0 0.7 GO:0071804 cellular potassium ion transport(GO:0071804) potassium ion transmembrane transport(GO:0071805)
0.0 0.1 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.0 0.2 GO:1990069 stomatal opening(GO:1990069)
0.0 0.1 GO:0010971 positive regulation of G2/M transition of mitotic cell cycle(GO:0010971) positive regulation of cell cycle G2/M phase transition(GO:1902751)
0.0 0.1 GO:0019310 inositol catabolic process(GO:0019310)
0.0 8.6 GO:0016567 protein ubiquitination(GO:0016567)
0.0 0.4 GO:0009863 salicylic acid mediated signaling pathway(GO:0009863)
0.0 1.6 GO:0007568 aging(GO:0007568)
0.0 0.5 GO:0051170 nuclear import(GO:0051170)
0.0 0.0 GO:0033499 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.0 0.5 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.0 0.7 GO:0010941 regulation of cell death(GO:0010941)
0.0 0.1 GO:0043328 protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043328)
0.0 0.2 GO:0046856 phosphatidylinositol dephosphorylation(GO:0046856)
0.0 0.5 GO:0010043 response to zinc ion(GO:0010043)
0.0 1.6 GO:0010228 vegetative to reproductive phase transition of meristem(GO:0010228)
0.0 0.6 GO:0009751 response to salicylic acid(GO:0009751)
0.0 0.1 GO:0050879 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.0 0.2 GO:0031053 primary miRNA processing(GO:0031053)
0.0 0.5 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.4 GO:0048506 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0 0.9 GO:0009615 response to virus(GO:0009615)
0.0 0.6 GO:0010286 heat acclimation(GO:0010286)
0.0 0.3 GO:0090630 activation of GTPase activity(GO:0090630)
0.0 0.1 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.0 0.1 GO:0009560 embryo sac egg cell differentiation(GO:0009560)
0.0 0.2 GO:0007030 Golgi organization(GO:0007030)
0.0 0.3 GO:0009694 jasmonic acid metabolic process(GO:0009694)
0.0 0.2 GO:0010227 floral organ abscission(GO:0010227)
0.0 0.1 GO:0009662 etioplast organization(GO:0009662)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 GO:0005712 chiasma(GO:0005712)
0.2 0.8 GO:0034657 GID complex(GO:0034657)
0.1 0.9 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.1 0.5 GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain(GO:0000220)
0.1 0.5 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.1 1.0 GO:0017119 Golgi transport complex(GO:0017119)
0.1 0.3 GO:0031080 nuclear pore outer ring(GO:0031080)
0.1 0.3 GO:0034457 Mpp10 complex(GO:0034457)
0.1 0.3 GO:0031417 N-terminal protein acetyltransferase complex(GO:0031414) NatC complex(GO:0031417)
0.1 1.6 GO:0072686 mitotic spindle(GO:0072686)
0.1 1.4 GO:0031965 nuclear membrane(GO:0031965)
0.1 0.7 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 0.7 GO:1990726 Lsm1-7-Pat1 complex(GO:1990726)
0.1 0.4 GO:0043078 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.1 0.5 GO:0031372 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.1 0.7 GO:0015030 Cajal body(GO:0015030)
0.1 0.5 GO:0030897 HOPS complex(GO:0030897)
0.1 0.4 GO:0005776 autophagosome(GO:0005776)
0.1 0.5 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.1 0.3 GO:0017053 transcriptional repressor complex(GO:0017053)
0.1 0.6 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 0.5 GO:0035861 site of double-strand break(GO:0035861)
0.0 0.5 GO:0005765 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.0 0.3 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.0 0.1 GO:0034703 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.0 0.6 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 0.1 GO:0005846 nuclear cap binding complex(GO:0005846)
0.0 0.5 GO:1903561 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.0 0.4 GO:0030014 CCR4-NOT complex(GO:0030014)
0.0 0.3 GO:0005847 mRNA cleavage and polyadenylation specificity factor complex(GO:0005847)
0.0 0.7 GO:0031304 intrinsic component of mitochondrial inner membrane(GO:0031304)
0.0 0.8 GO:0031306 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 3.2 GO:0016604 nuclear body(GO:0016604)
0.0 0.3 GO:0032806 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.0 0.4 GO:0035267 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.0 0.7 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.0 0.2 GO:0030906 retromer, cargo-selective complex(GO:0030906)
0.0 0.2 GO:0030127 COPII vesicle coat(GO:0030127)
0.0 2.2 GO:0090406 pollen tube(GO:0090406)
0.0 0.1 GO:0030132 clathrin coat of coated pit(GO:0030132)
0.0 0.4 GO:0005769 early endosome(GO:0005769)
0.0 0.2 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.0 0.1 GO:0005787 signal peptidase complex(GO:0005787)
0.0 0.3 GO:0000124 SAGA complex(GO:0000124)
0.0 0.5 GO:0005798 Golgi-associated vesicle(GO:0005798)
0.0 0.2 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 6.6 GO:0042579 peroxisome(GO:0005777) microbody(GO:0042579)
0.0 0.6 GO:0008287 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.0 1.2 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.3 GO:0000145 exocyst(GO:0000145)
0.0 1.0 GO:0030176 integral component of endoplasmic reticulum membrane(GO:0030176)
0.0 0.9 GO:0045271 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 0.5 GO:0005881 cytoplasmic microtubule(GO:0005881)
0.0 0.2 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 0.1 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.0 0.2 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 0.1 GO:0000813 ESCRT I complex(GO:0000813)
0.0 0.9 GO:0000139 Golgi membrane(GO:0000139)
0.0 1.1 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 0.2 GO:0005736 DNA-directed RNA polymerase I complex(GO:0005736)
0.0 1.2 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 1.8 GO:0052578 alpha-farnesene synthase activity(GO:0052578)
0.4 1.4 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.4 1.4 GO:0052594 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.3 1.5 GO:0005355 glucose transmembrane transporter activity(GO:0005355)
0.3 0.8 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.3 0.8 GO:0043325 phosphatidylinositol-3,4-bisphosphate binding(GO:0043325)
0.3 0.8 GO:0035605 peptidyl-cysteine S-nitrosylase activity(GO:0035605)
0.3 0.8 GO:0015119 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
0.3 1.3 GO:0050551 (E)-beta-ocimene synthase activity(GO:0034768) myrcene synthase activity(GO:0050551)
0.2 0.9 GO:0032791 lead ion binding(GO:0032791)
0.2 0.9 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.2 0.7 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.2 1.9 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
0.2 0.6 GO:0050412 cinnamate beta-D-glucosyltransferase activity(GO:0050412)
0.2 0.7 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.2 0.7 GO:0016751 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.2 0.5 GO:0000403 Y-form DNA binding(GO:0000403) flap-structured DNA binding(GO:0070336)
0.2 1.4 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.2 0.6 GO:0008251 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.1 0.9 GO:0030527 structural constituent of chromatin(GO:0030527)
0.1 1.4 GO:0008113 peptide-methionine (S)-S-oxide reductase activity(GO:0008113)
0.1 1.4 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.1 1.2 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.1 0.5 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.1 0.4 GO:0046524 sucrose-phosphate synthase activity(GO:0046524)
0.1 0.9 GO:1990137 plant seed peroxidase activity(GO:1990137)
0.1 0.4 GO:0016906 sterol 3-beta-glucosyltransferase activity(GO:0016906)
0.1 0.6 GO:0008131 primary amine oxidase activity(GO:0008131)
0.1 0.5 GO:0070034 telomerase RNA binding(GO:0070034)
0.1 0.4 GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity(GO:0050403) cis-zeatin O-beta-D-glucosyltransferase activity(GO:0050502)
0.1 1.1 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.1 0.6 GO:0004765 shikimate kinase activity(GO:0004765)
0.1 0.3 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.1 0.6 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.1 0.4 GO:0005432 calcium:sodium antiporter activity(GO:0005432)
0.1 0.5 GO:0005365 myo-inositol transmembrane transporter activity(GO:0005365) myo-inositol:proton symporter activity(GO:0005366) polyol transmembrane transporter activity(GO:0015166)
0.1 1.4 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.1 0.5 GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity(GO:0003857)
0.1 0.3 GO:0052629 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.1 0.3 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.1 0.3 GO:0010331 gibberellin binding(GO:0010331)
0.1 0.5 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.1 0.4 GO:0043546 molybdopterin cofactor binding(GO:0043546)
0.1 0.6 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.1 0.4 GO:1990381 ubiquitin-specific protease binding(GO:1990381)
0.1 0.7 GO:0004834 tryptophan synthase activity(GO:0004834)
0.1 1.3 GO:0030295 kinase activator activity(GO:0019209) protein kinase activator activity(GO:0030295)
0.1 0.7 GO:0004383 guanylate cyclase activity(GO:0004383)
0.1 0.5 GO:0015369 calcium:cation antiporter activity(GO:0015368) calcium:proton antiporter activity(GO:0015369)
0.1 0.5 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.1 0.7 GO:0004715 non-membrane spanning protein tyrosine kinase activity(GO:0004715)
0.1 0.8 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.1 1.0 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.1 0.3 GO:0052659 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
0.1 0.3 GO:0004647 phosphoserine phosphatase activity(GO:0004647)
0.1 0.5 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.1 0.3 GO:0050291 sphingosine N-acyltransferase activity(GO:0050291)
0.1 1.2 GO:0016018 cyclosporin A binding(GO:0016018)
0.1 0.2 GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity(GO:0052725)
0.1 0.5 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.1 0.3 GO:0004441 inositol-1,4-bisphosphate 1-phosphatase activity(GO:0004441)
0.1 0.5 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.1 0.9 GO:0004630 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.1 0.9 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.1 0.4 GO:0005254 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.1 0.3 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 0.2 GO:0051752 phosphoglucan, water dikinase activity(GO:0051752)
0.1 2.1 GO:0016597 amino acid binding(GO:0016597)
0.1 0.2 GO:0019781 NEDD8 activating enzyme activity(GO:0019781)
0.1 0.2 GO:0051777 ent-kaurenoate oxidase activity(GO:0051777)
0.1 1.0 GO:1901981 phosphatidylinositol phosphate binding(GO:1901981)
0.1 0.2 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.1 0.4 GO:0017112 Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.1 0.7 GO:0004713 protein tyrosine kinase activity(GO:0004713)
0.1 0.4 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 0.6 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.1 0.3 GO:0072328 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.0 3.5 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.0 0.3 GO:0042171 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.0 0.1 GO:1990247 N6-methyladenosine-containing RNA binding(GO:1990247)
0.0 0.9 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.0 0.3 GO:0080109 indole-3-acetonitrile nitrile hydratase activity(GO:0080109)
0.0 0.3 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.0 0.8 GO:0005504 fatty acid binding(GO:0005504)
0.0 0.4 GO:0032041 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 0.1 GO:0015292 uniporter activity(GO:0015292)
0.0 0.1 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.0 0.5 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.0 0.5 GO:0070567 cytidylyltransferase activity(GO:0070567)
0.0 1.4 GO:0051753 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.0 0.4 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.0 0.8 GO:0046961 proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.0 0.3 GO:0018685 alkane 1-monooxygenase activity(GO:0018685)
0.0 0.2 GO:0032454 histone demethylase activity (H3-K9 specific)(GO:0032454)
0.0 0.9 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 0.3 GO:0032036 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.0 0.5 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.4 GO:0051117 ATPase binding(GO:0051117)
0.0 0.5 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.4 GO:0008865 fructokinase activity(GO:0008865)
0.0 0.1 GO:0004106 chorismate mutase activity(GO:0004106)
0.0 0.3 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.0 0.4 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.0 0.1 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.0 0.4 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.0 0.4 GO:0030674 protein binding, bridging(GO:0030674)
0.0 0.2 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.0 0.3 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.0 0.2 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.0 0.1 GO:0004594 pantothenate kinase activity(GO:0004594)
0.0 2.7 GO:0051213 dioxygenase activity(GO:0051213)
0.0 0.3 GO:0004550 nucleoside diphosphate kinase activity(GO:0004550)
0.0 3.6 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 0.2 GO:0048029 monosaccharide binding(GO:0048029)
0.0 0.8 GO:0036442 hydrogen-exporting ATPase activity(GO:0036442)
0.0 0.2 GO:0000339 RNA cap binding(GO:0000339)
0.0 0.5 GO:0030276 clathrin binding(GO:0030276)
0.0 9.9 GO:0019787 ubiquitin-like protein transferase activity(GO:0019787)
0.0 0.9 GO:0004707 MAP kinase activity(GO:0004707)
0.0 1.4 GO:0043130 ubiquitin binding(GO:0043130)
0.0 0.4 GO:0035064 methylated histone binding(GO:0035064)
0.0 0.4 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.0 0.5 GO:0045309 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.1 GO:0047714 galactolipase activity(GO:0047714)
0.0 0.2 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.0 0.1 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.0 2.0 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 1.0 GO:0019843 rRNA binding(GO:0019843)
0.0 0.6 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.0 0.1 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.0 0.8 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 0.0 GO:0070403 NAD+ binding(GO:0070403)
0.0 0.3 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.1 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.0 0.1 GO:0050113 inositol oxygenase activity(GO:0050113)
0.0 0.5 GO:0034212 peptide N-acetyltransferase activity(GO:0034212)
0.0 0.2 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.0 0.0 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.0 0.1 GO:0032977 membrane insertase activity(GO:0032977)
0.0 0.2 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.4 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 0.3 GO:0070122 isopeptidase activity(GO:0070122)
0.0 1.2 GO:0016407 acetyltransferase activity(GO:0016407)
0.0 0.1 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.0 0.1 GO:0017070 U6 snRNA binding(GO:0017070)
0.0 0.9 GO:0016831 carboxy-lyase activity(GO:0016831)
0.0 0.1 GO:0001047 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.0 0.1 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.0 0.1 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.0 0.1 GO:0001671 ATPase activator activity(GO:0001671)
0.0 0.2 GO:0019903 protein phosphatase binding(GO:0019903)
0.0 0.5 GO:0008081 phosphoric diester hydrolase activity(GO:0008081)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.4 PID CIRCADIAN PATHWAY Circadian rhythm pathway
0.3 0.8 PID AURORA A PATHWAY Aurora A signaling
0.2 1.1 PID AP1 PATHWAY AP-1 transcription factor network
0.2 1.2 PID MTOR 4PATHWAY mTOR signaling pathway
0.1 0.3 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms
0.1 0.4 ST INTEGRIN SIGNALING PATHWAY Integrin Signaling Pathway
0.1 0.7 PID RAC1 PATHWAY RAC1 signaling pathway
0.0 0.2 PID HIF2PATHWAY HIF-2-alpha transcription factor network
0.0 0.1 SA G2 AND M PHASES Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition.

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.4 REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression
0.3 0.8 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.1 1.1 REACTOME INTERFERON SIGNALING Genes involved in Interferon Signaling
0.1 0.4 REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES Genes involved in Loss of Nlp from mitotic centrosomes
0.1 0.4 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.1 0.2 REACTOME NEUROTRANSMITTER RECEPTOR BINDING AND DOWNSTREAM TRANSMISSION IN THE POSTSYNAPTIC CELL Genes involved in Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell
0.1 0.2 REACTOME NRAGE SIGNALS DEATH THROUGH JNK Genes involved in NRAGE signals death through JNK
0.1 0.2 REACTOME SIGNAL ATTENUATION Genes involved in Signal attenuation
0.1 0.2 REACTOME DEADENYLATION DEPENDENT MRNA DECAY Genes involved in Deadenylation-dependent mRNA decay
0.1 0.2 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.0 0.4 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.0 0.2 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.0 0.1 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.0 0.5 REACTOME METABOLISM OF RNA Genes involved in Metabolism of RNA