Project

GSE43616: Time-course of wild-type Arabidopsis leaf

Navigation
Downloads

Results for AT5G52020

Z-value: 1.18

Transcription factors associated with AT5G52020

Gene Symbol Gene ID Gene Info
AT5G52020 Integrase-type DNA-binding superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT5G52020arTal_v1_Chr5_-_21125065_21125065-0.164.2e-01Click!

Activity profile of AT5G52020 motif

Sorted Z-values of AT5G52020 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_-_18098633 6.67 AT4G38770.1
proline-rich protein 4
Chr5_-_15378416 6.49 AT5G38410.3
AT5G38410.2
Ribulose bisphosphate carboxylase (small chain) family protein
Chr5_-_15378642 6.47 AT5G38410.1
Ribulose bisphosphate carboxylase (small chain) family protein
Chr3_+_5505360 6.16 AT3G16240.1
delta tonoplast integral protein
Chr3_-_197974 6.05 AT3G01500.1
carbonic anhydrase 1
Chr1_-_29635931 6.04 AT1G78820.1
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Chr3_-_198160 5.98 AT3G01500.2
carbonic anhydrase 1
Chr3_-_198664 5.93 AT3G01500.3
carbonic anhydrase 1
Chr4_-_17777445 5.85 AT4G37800.1
xyloglucan endotransglucosylase/hydrolase 7
Chr4_+_13391293 5.85 AT4G26530.2
AT4G26530.1
Aldolase superfamily protein
Chr3_-_197564 5.79 AT3G01500.4
carbonic anhydrase 1
Chr4_+_13390754 5.47 AT4G26530.3
Aldolase superfamily protein
Chr5_+_8863224 5.43 AT5G25460.1
transmembrane protein, putative (Protein of unknown function, DUF642)
Chr5_+_26298728 5.36 AT5G65730.1
xyloglucan endotransglucosylase/hydrolase 6
Chr3_+_5556710 5.24 AT3G16370.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_3157501 5.16 AT1G09750.1
Eukaryotic aspartyl protease family protein
Chr2_-_18744322 5.09 AT2G45470.1
FASCICLIN-like arabinogalactan protein 8
Chr1_+_10375754 5.01 AT1G29670.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_10375599 4.93 AT1G29670.2
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_-_25343369 4.86 AT5G63180.1
Pectin lyase-like superfamily protein
Chr2_-_11717432 4.82 AT2G27385.3
AT2G27385.2
AT2G27385.1
Pollen Ole e 1 allergen and extensin family protein
Chr5_+_17760865 4.56 AT5G44130.1
FASCICLIN-like arabinogalactan protein 13 precursor
Chr3_-_16448844 4.52 AT3G44990.1
xyloglucan endo-transglycosylase-related 8
Chr2_-_17648945 4.47 AT2G42380.1
AT2G42380.4
AT2G42380.3
AT2G42380.2
AT2G42380.5
Basic-leucine zipper (bZIP) transcription factor family protein
Chr1_+_10371675 4.44 AT1G29660.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_9492655 4.43 AT3G25920.1
ribosomal protein L15
Chr2_+_9844134 4.40 AT2G23130.1
AT2G23130.2
arabinogalactan protein 17
Chr3_-_3357754 4.38 AT3G10720.2
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_+_2199151 4.34 AT2G05790.1
O-Glycosyl hydrolases family 17 protein
Chr4_-_7493080 4.33 AT4G12730.1
FASCICLIN-like arabinogalactan 2
Chr3_-_19139423 4.33 AT3G51600.1
lipid transfer protein 5
Chr2_+_17592038 4.32 AT2G42220.1
Rhodanese/Cell cycle control phosphatase superfamily protein
Chr3_-_1860797 4.13 AT3G06145.1
RING zinc finger protein
Chr3_-_4744263 4.12 AT3G14240.1
Subtilase family protein
Chr2_+_18626188 4.11 AT2G45180.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_+_6100714 4.09 AT4G09650.1
F-type H+-transporting ATPase subunit delta
Chr3_-_23328789 4.08 AT3G63140.1
chloroplast stem-loop binding protein of 41 kDa
Chr1_-_11740399 4.08 AT1G32470.1
Single hybrid motif superfamily protein
Chr5_+_26767599 4.03 AT5G67070.1
ralf-like 34
Chr1_-_26711462 4.01 AT1G70830.4
AT1G70830.2
AT1G70830.1
AT1G70830.5
AT1G70830.3
MLP-like protein 28
Chr1_-_4530222 3.95 AT1G13250.1
galacturonosyltransferase-like 3
Chr3_-_4008018 3.92 AT3G12610.1
Leucine-rich repeat (LRR) family protein
Chr5_-_8916856 3.86 AT5G25610.1
BURP domain-containing protein
Chr1_-_28419635 3.85 AT1G75680.1
glycosyl hydrolase 9B7
Chr2_-_15474717 3.84 AT2G36870.2
AT2G36870.1
xyloglucan endotransglucosylase/hydrolase 32
Chr3_-_7557969 3.83 AT3G21460.1
Glutaredoxin family protein
Chr2_+_15059763 3.82 AT2G35860.1
FASCICLIN-like arabinogalactan protein 16 precursor
Chr2_-_9130212 3.82 AT2G21330.3
AT2G21330.2
fructose-bisphosphate aldolase 1
Chr2_-_9130619 3.79 AT2G21330.1
fructose-bisphosphate aldolase 1
Chr2_+_13647699 3.78 AT2G32100.1
ovate family protein 16
Chr1_+_898480 3.77 AT1G03600.1
photosystem II family protein
Chr5_+_1664040 3.76 AT5G05580.2
AT5G05580.1
fatty acid desaturase 8
Chr1_-_983544 3.74 AT1G03870.1
FASCICLIN-like arabinoogalactan 9
Chr5_+_4087689 3.69 AT5G12940.1
Leucine-rich repeat (LRR) family protein
Chr4_+_12660687 3.69 AT4G24510.1
HXXXD-type acyl-transferase family protein
Chr1_+_5489145 3.69 AT1G15980.1
NDH-dependent cyclic electron flow 1
Chr2_-_12433796 3.68 AT2G28950.1
expansin A6
Chr3_+_5681380 3.67 AT3G16670.1
Pollen Ole e 1 allergen and extensin family protein
Chr3_+_17949416 3.64 AT3G48460.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_3356811 3.64 AT3G10720.1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr3_+_2717557 3.61 AT3G08940.2
AT3G08940.1
light harvesting complex photosystem II
Chr2_+_8940833 3.59 AT2G20750.2
AT2G20750.1
expansin B1
Chr2_+_14384797 3.56 AT2G34060.1
Peroxidase superfamily protein
Chr3_+_2712236 3.51 AT3G08920.1
Rhodanese/Cell cycle control phosphatase superfamily protein
Chr3_+_21076505 3.50 AT3G56940.1
AT3G56940.2
dicarboxylate diiron protein, putative (Crd1)
Chr3_-_21949796 3.50 AT3G59400.1
protein GENOMES UNCOUPLED 4
Chr4_-_18165740 3.48 AT4G38970.2
fructose-bisphosphate aldolase 2
Chr4_-_18166008 3.48 AT4G38970.1
fructose-bisphosphate aldolase 2
Chr1_+_5058583 3.47 AT1G14700.4
AT1G14700.1
AT1G14700.3
AT1G14700.2
purple acid phosphatase 3
Chr2_-_9428170 3.45 AT2G22170.1
Lipase/lipooxygenase, PLAT/LH2 family protein
Chr4_-_12768239 3.43 AT4G24770.1
31-kDa RNA binding protein
Chr5_-_4171954 3.41 AT5G13140.1
Pollen Ole e 1 allergen and extensin family protein
Chr4_-_13398307 3.41 AT4G26540.1
Leucine-rich repeat receptor-like protein kinase family protein
Chr4_-_12769419 3.41 AT4G24770.2
31-kDa RNA binding protein
Chr4_-_12772438 3.40 AT4G24780.1
AT4G24780.2
Pectin lyase-like superfamily protein
Chr3_+_8586359 3.39 AT3G23805.1
ralf-like 24
Chr3_-_17495033 3.38 AT3G47470.1
light-harvesting chlorophyll-protein complex I subunit A4
Chr1_-_6319427 3.37 AT1G18360.1
alpha/beta-Hydrolases superfamily protein
Chr5_+_16468327 3.37 AT5G41140.1
AT5G41140.2
Myosin heavy chain-related protein
Chr1_+_29575806 3.36 AT1G78630.1
Ribosomal protein L13 family protein
Chr2_+_18073305 3.36 AT2G43550.1
scorpion toxin-like knottin superfamily protein
Chr4_+_12876822 3.36 AT4G25080.6
AT4G25080.5
AT4G25080.2
AT4G25080.1
AT4G25080.3
AT4G25080.4
magnesium-protoporphyrin IX methyltransferase
Chr5_-_22560461 3.35 AT5G55730.2
AT5G55730.1
FASCICLIN-like arabinogalactan 1
Chr1_+_2047886 3.35 AT1G06680.2
photosystem II subunit P-1
Chr1_+_2047634 3.35 AT1G06680.1
photosystem II subunit P-1
Chr1_+_20713499 3.34 AT1G55480.1
protein containing PDZ domain, a K-box domain, and a TPR region
Chr3_+_23345754 3.33 AT3G63200.1
PATATIN-like protein 9
Chr1_+_24778257 3.33 AT1G66430.1
pfkB-like carbohydrate kinase family protein
Chr5_+_1919080 3.32 AT5G06290.1
AT5G06290.2
2-cysteine peroxiredoxin B
Chr5_+_2680401 3.30 AT5G08330.1
TCP family transcription factor
Chr1_-_29485389 3.29 AT1G78370.1
glutathione S-transferase TAU 20
Chr4_-_16583075 3.28 AT4G34760.1
SAUR-like auxin-responsive protein family
Chr1_+_9740508 3.26 AT1G27950.1
glycosylphosphatidylinositol-anchored lipid protein transfer 1
Chr4_-_15059846 3.24 AT4G30950.1
fatty acid desaturase 6
Chr1_+_17918207 3.24 AT1G48480.1
receptor-like kinase 1
Chr1_+_24647121 3.24 AT1G66180.1
Eukaryotic aspartyl protease family protein
Chr2_+_19191247 3.23 AT2G46710.1
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
Chr1_-_23956260 3.21 AT1G64510.1
AT1G64510.2
Translation elongation factor EF1B/ribosomal protein S6 family protein
Chr5_+_208866 3.21 AT5G01530.1
light harvesting complex photosystem II
Chr3_-_8589754 3.18 AT3G23810.1
S-adenosyl-l-homocysteine (SAH) hydrolase 2
Chr5_+_24494291 3.17 AT5G60890.1
myb domain protein 34
Chr1_-_26515188 3.17 AT1G70370.2
AT1G70370.1
polygalacturonase 2
Chr3_+_22902491 3.17 AT3G61870.1
AT3G61870.2
plant/protein
Chr1_-_4265156 3.16 AT1G12500.1
Nucleotide-sugar transporter family protein
Chr3_-_2334185 3.15 AT3G07320.1
O-Glycosyl hydrolases family 17 protein
Chr5_-_21068327 3.14 AT5G51820.1
phosphoglucomutase
Chr2_-_15790139 3.14 AT2G37640.1
Barwin-like endoglucanases superfamily protein
Chr2_-_15789605 3.11 AT2G37640.2
Barwin-like endoglucanases superfamily protein
Chr2_-_8971339 3.10 AT2G20835.1
hypothetical protein
Chr4_-_17606924 3.10 AT4G37450.1
AT4G37450.2
arabinogalactan protein 18
Chr4_-_16806830 3.07 AT4G35320.1
hypothetical protein
Chr3_-_3108266 3.06 AT3G10080.1
AT3G10080.2
RmlC-like cupins superfamily protein
Chr1_+_28428671 3.05 AT1G75710.1
C2H2-like zinc finger protein
Chr1_+_20101299 3.05 AT1G53840.1
pectin methylesterase 1
Chr4_-_8307934 3.04 AT4G14440.1
3-hydroxyacyl-CoA dehydratase 1
Chr4_-_11885533 3.04 AT4G22570.2
AT4G22570.1
adenine phosphoribosyl transferase 3
Chr5_-_7419335 3.03 AT5G22390.1
FANTASTIC four-like protein (DUF3049)
Chr5_-_3190321 3.02 AT5G10170.1
myo-inositol-1-phosphate synthase 3
Chr4_+_9556783 3.00 AT4G16980.1
arabinogalactan-protein family
Chr5_-_24990331 2.98 AT5G62220.1
glycosyltransferase 18
Chr5_-_2182538 2.97 AT5G07020.1
proline-rich family protein
Chr3_-_19467455 2.97 AT3G52500.1
Eukaryotic aspartyl protease family protein
Chr4_-_13958107 2.96 AT4G28080.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_-_26538437 2.96 AT1G70410.2
beta carbonic anhydrase 4
Chr4_+_10651744 2.95 AT4G19530.1
AT4G19530.2
disease resistance protein (TIR-NBS-LRR class) family
Chr4_-_17355891 2.95 AT4G36850.3
AT4G36850.4
AT4G36850.2
AT4G36850.1
PQ-loop repeat family protein / transmembrane family protein
Chr2_+_6518749 2.95 AT2G15050.3
AT2G15050.1
AT2G15050.2
lipid transfer protein
Chr1_-_6487153 2.95 AT1G18810.1
phytochrome kinase substrate-like protein
Chr1_+_25401514 2.94 AT1G67750.1
Pectate lyase family protein
Chr3_-_7796310 2.94 AT3G22120.1
AT3G22120.2
cell wall-plasma membrane linker protein
Chr4_+_15401640 2.93 AT4G31840.1
early nodulin-like protein 15
Chr3_+_20016837 2.93 AT3G54050.1
AT3G54050.2
high cyclic electron flow 1
Chr5_+_25016860 2.90 AT5G62280.1
DUF1442 family protein (DUF1442)
Chr3_-_6855513 2.89 AT3G19720.3
AT3G19720.2
AT3G19720.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr4_-_7545326 2.89 AT4G12880.2
early nodulin-like protein 19
Chr3_+_18262290 2.88 AT3G49260.1
AT3G49260.3
AT3G49260.2
AT3G49260.4
IQ-domain 21
Chr1_-_19101265 2.86 AT1G51500.1
ABC-2 type transporter family protein
Chr4_+_9780224 2.86 AT4G17560.1
Ribosomal protein L19 family protein
Chr4_+_17986384 2.86 AT4G38430.1
rho guanyl-nucleotide exchange factor 1
Chr2_+_19521774 2.85 AT2G47590.1
photolyase/blue-light receptor 2
Chr2_+_14216771 2.85 AT2G33570.1
glycosyltransferase family protein (DUF23)
Chr5_+_21020014 2.84 AT5G51750.1
subtilase 1.3
Chr4_-_7545512 2.83 AT4G12880.1
early nodulin-like protein 19
Chr3_-_373805 2.83 AT3G02110.1
serine carboxypeptidase-like 25
Chr1_-_20172364 2.83 AT1G54040.1
epithiospecifier protein
Chr1_-_20173933 2.83 AT1G54040.3
AT1G54040.2
epithiospecifier protein
Chr3_-_20903080 2.82 AT3G56370.1
Leucine-rich repeat protein kinase family protein
Chr1_-_15607966 2.82 AT1G41830.1
SKU5-similar 6
Chr4_-_2352025 2.81 AT4G04640.1
ATPase, F1 complex, gamma subunit protein
Chr3_+_19845097 2.80 AT3G53530.2
AT3G53530.1
Chloroplast-targeted copper chaperone protein
Chr1_+_10810877 2.79 AT1G30520.4
AT1G30520.3
acyl-activating enzyme 14
Chr1_-_26537422 2.79 AT1G70410.3
AT1G70410.1
beta carbonic anhydrase 4
Chr1_+_23911024 2.78 AT1G64390.1
glycosyl hydrolase 9C2
Chr2_-_14523568 2.78 AT2G34420.1
photosystem II light harvesting complex protein B1B2
Chr5_+_16768935 2.77 AT5G41900.1
alpha/beta-Hydrolases superfamily protein
Chr4_+_160643 2.76 AT4G00360.1
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr3_-_19541284 2.76 AT3G52720.4
AT3G52720.2
alpha carbonic anhydrase 1
Chr3_+_1313297 2.76 AT3G04790.1
Ribose 5-phosphate isomerase, type A protein
Chr2_+_11550705 2.76 AT2G27060.1
AT2G27060.2
AT2G27060.3
Leucine-rich repeat protein kinase family protein
Chr5_+_1952505 2.75 AT5G06390.1
FASCICLIN-like arabinogalactan protein 17 precursor
Chr3_+_11252807 2.75 AT3G29320.1
Glycosyl transferase, family 35
Chr3_+_7280792 2.75 AT3G20820.1
Leucine-rich repeat (LRR) family protein
Chr1_+_12267808 2.74 AT1G33811.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_19542160 2.74 AT3G52720.3
AT3G52720.1
alpha carbonic anhydrase 1
Chr2_-_19617681 2.72 AT2G47930.1
arabinogalactan protein 26
Chr4_-_17181261 2.72 AT4G36360.2
beta-galactosidase 3
Chr2_+_18691664 2.72 AT2G45340.1
Leucine-rich repeat protein kinase family protein
Chr3_-_219104 2.72 AT3G01550.2
AT3G01550.1
phosphoenolpyruvate (pep)/phosphate translocator 2
Chr1_+_18802552 2.71 AT1G50732.1
transmembrane protein
Chr4_-_17181466 2.70 AT4G36360.1
beta-galactosidase 3
Chr3_-_18834834 2.70 AT3G50685.1
anti-muellerian hormone type-2 receptor
Chr1_-_29352946 2.69 AT1G78060.1
Glycosyl hydrolase family protein
Chr1_+_12026936 2.69 AT1G33170.1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_+_10810397 2.69 AT1G30520.1
AT1G30520.2
acyl-activating enzyme 14
Chr5_-_23406479 2.69 AT5G57780.1
transcription factor
Chr4_-_8016582 2.68 AT4G13840.1
HXXXD-type acyl-transferase family protein
Chr4_-_1230164 2.67 AT4G02770.1
photosystem I subunit D-1
Chr2_-_332781 2.67 AT2G01755.1
AT2G01755.2
hypothetical protein
Chr5_+_18697235 2.66 AT5G46110.2
AT5G46110.1
AT5G46110.3
AT5G46110.4
Glucose-6-phosphate/phosphate translocator-like protein
Chr5_+_7778017 2.64 AT5G23120.2
AT5G23120.1
photosystem II stability/assembly factor, chloroplast (HCF136)
Chr5_+_7168106 2.64 AT5G21100.1
Plant L-ascorbate oxidase
Chr3_+_3857780 2.63 AT3G12110.1
actin-11
Chr5_+_6670275 2.62 AT5G19730.1
Pectin lyase-like superfamily protein
Chr4_+_8883825 2.62 AT4G15560.1
Deoxyxylulose-5-phosphate synthase
Chr1_-_3880391 2.62 AT1G11545.1
xyloglucan endotransglucosylase/hydrolase 8
Chr4_-_7353117 2.61 AT4G12420.1
AT4G12420.2
Cupredoxin superfamily protein
Chr4_-_8454144 2.61 AT4G14740.4
AT4G14740.2
AT4G14740.1
auxin canalization protein (DUF828)
Chr4_-_15429113 2.61 AT4G31890.2
AT4G31890.1
AT4G31890.3
ARM repeat superfamily protein
Chr3_-_15617149 2.60 AT3G43720.2
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr3_+_1225919 2.59 AT3G04550.1
rubisco accumulation factor-like protein
Chr5_-_2185972 2.59 AT5G07030.1
Eukaryotic aspartyl protease family protein
Chr3_-_3931000 2.59 AT3G12345.1
FKBP-type peptidyl-prolyl cis-trans isomerase
Chr3_-_23417119 2.58 AT3G63410.1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_-_8902835 2.58 AT3G24480.1
Leucine-rich repeat (LRR) family protein
Chr1_+_418726 2.57 AT1G02205.4
AT1G02205.3
AT1G02205.5
AT1G02205.1
Fatty acid hydroxylase superfamily
Chr1_-_1768837 2.57 AT1G05850.2
AT1G05850.1
Chitinase family protein
Chr5_+_13949228 2.57 AT5G35777.1

Chr1_+_28498821 2.57 AT1G75900.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_15617309 2.56 AT3G43720.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_19565270 2.56 AT1G52510.2
AT1G52510.1
alpha/beta-Hydrolases superfamily protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G52020

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
2.8 8.3 GO:0015840 urea transport(GO:0015840)
2.3 29.5 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
1.9 5.7 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
1.6 28.9 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
1.2 6.1 GO:0042873 phosphoglycerate transport(GO:0015713) aldonate transport(GO:0042873)
1.1 8.7 GO:0043489 RNA stabilization(GO:0043489)
1.1 7.5 GO:0043446 cellular alkane metabolic process(GO:0043446)
1.0 3.1 GO:0042817 pyridoxal metabolic process(GO:0042817)
1.0 4.0 GO:0080094 response to trehalose-6-phosphate(GO:0080094)
1.0 4.0 GO:0072351 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
1.0 6.9 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.9 0.9 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.9 17.2 GO:0006949 syncytium formation(GO:0006949)
0.9 4.4 GO:0071260 cellular response to mechanical stimulus(GO:0071260)
0.9 3.5 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.9 6.9 GO:0010065 primary meristem tissue development(GO:0010065)
0.8 3.2 GO:0090308 regulation of methylation-dependent chromatin silencing(GO:0090308) positive regulation of methylation-dependent chromatin silencing(GO:0090309)
0.8 4.6 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.8 3.8 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.7 3.7 GO:0042549 photosystem II stabilization(GO:0042549)
0.7 4.5 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.7 8.1 GO:0010206 photosystem II repair(GO:0010206)
0.7 2.1 GO:0019354 siroheme biosynthetic process(GO:0019354) siroheme metabolic process(GO:0046156)
0.7 4.2 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.7 2.7 GO:0000719 photoreactive repair(GO:0000719)
0.7 3.3 GO:0005980 glycogen catabolic process(GO:0005980)
0.7 4.0 GO:0009650 UV protection(GO:0009650)
0.6 1.9 GO:1901031 regulation of oxidoreductase activity(GO:0051341) regulation of response to reactive oxygen species(GO:1901031)
0.6 0.6 GO:0010253 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.6 10.3 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.6 3.0 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.6 4.2 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.6 1.8 GO:0010220 positive regulation of vernalization response(GO:0010220)
0.6 2.4 GO:0006346 methylation-dependent chromatin silencing(GO:0006346)
0.6 2.4 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.6 2.4 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.6 4.1 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.6 5.2 GO:1901959 positive regulation of cutin biosynthetic process(GO:1901959)
0.6 1.7 GO:0050687 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.6 1.1 GO:1990937 xylan acetylation(GO:1990937)
0.6 1.7 GO:1900032 regulation of trichome patterning(GO:1900032) negative regulation of trichome patterning(GO:1900033)
0.6 2.8 GO:0010226 response to lithium ion(GO:0010226)
0.5 13.0 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.5 2.2 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.5 3.2 GO:0051098 regulation of binding(GO:0051098)
0.5 2.6 GO:0045730 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.5 46.3 GO:0045490 pectin catabolic process(GO:0045490)
0.5 3.6 GO:1904276 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.5 2.0 GO:0030203 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.5 1.5 GO:0080051 cutin transport(GO:0080051)
0.5 1.0 GO:0010376 stomatal complex formation(GO:0010376)
0.5 1.5 GO:0035017 cuticle pattern formation(GO:0035017)
0.5 2.4 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.5 1.8 GO:0080003 thalianol metabolic process(GO:0080003)
0.4 3.6 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.4 5.7 GO:0010158 abaxial cell fate specification(GO:0010158)
0.4 11.4 GO:0010025 wax biosynthetic process(GO:0010025)
0.4 6.1 GO:0048564 photosystem I assembly(GO:0048564)
0.4 1.7 GO:0072502 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.4 3.0 GO:0006021 inositol biosynthetic process(GO:0006021)
0.4 2.2 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.4 4.3 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.4 1.7 GO:0009660 amyloplast organization(GO:0009660)
0.4 2.5 GO:0090057 root radial pattern formation(GO:0090057)
0.4 10.1 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.4 0.4 GO:0046655 folic acid metabolic process(GO:0046655)
0.4 1.7 GO:0035964 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.4 6.6 GO:0010315 auxin efflux(GO:0010315)
0.4 2.0 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.4 2.0 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.4 1.1 GO:0046085 adenosine metabolic process(GO:0046085)
0.4 1.1 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.4 3.0 GO:0044209 AMP salvage(GO:0044209)
0.4 1.1 GO:0036115 fatty-acyl-CoA catabolic process(GO:0036115) malonyl-CoA catabolic process(GO:2001294)
0.4 1.5 GO:0070206 protein trimerization(GO:0070206)
0.4 2.6 GO:0046621 negative regulation of organ growth(GO:0046621)
0.4 2.2 GO:0097502 mannosylation(GO:0097502)
0.4 1.1 GO:0071457 cellular response to ozone(GO:0071457)
0.4 1.4 GO:0010424 DNA methylation on cytosine within a CG sequence(GO:0010424)
0.4 21.8 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.3 2.1 GO:0000212 meiotic spindle organization(GO:0000212)
0.3 1.0 GO:0051639 actin filament network formation(GO:0051639)
0.3 2.7 GO:0031222 arabinan catabolic process(GO:0031222)
0.3 22.0 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.3 0.7 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.3 1.0 GO:0001736 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.3 0.3 GO:1901463 regulation of tetrapyrrole biosynthetic process(GO:1901463) positive regulation of tetrapyrrole biosynthetic process(GO:1901465)
0.3 1.3 GO:0010394 homogalacturonan metabolic process(GO:0010394)
0.3 1.3 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.3 2.6 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.3 0.3 GO:0090224 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.3 4.1 GO:0009554 megasporogenesis(GO:0009554)
0.3 2.5 GO:0006526 arginine biosynthetic process(GO:0006526)
0.3 4.6 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.3 0.9 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.3 0.6 GO:0046083 adenine metabolic process(GO:0046083) adenine biosynthetic process(GO:0046084)
0.3 3.7 GO:0032544 plastid translation(GO:0032544)
0.3 3.9 GO:0005987 sucrose catabolic process(GO:0005987)
0.3 0.9 GO:0010541 acropetal auxin transport(GO:0010541)
0.3 3.0 GO:0009405 pathogenesis(GO:0009405)
0.3 2.1 GO:1902969 mitotic DNA replication(GO:1902969)
0.3 1.2 GO:0009590 detection of gravity(GO:0009590)
0.3 1.5 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.3 1.7 GO:0046717 acid secretion(GO:0046717)
0.3 2.6 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.3 3.4 GO:0007143 female meiotic division(GO:0007143)
0.3 2.6 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.3 0.8 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.3 6.9 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.3 0.8 GO:0019594 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.3 0.8 GO:0010117 photoprotection(GO:0010117)
0.3 16.3 GO:0007267 cell-cell signaling(GO:0007267)
0.3 1.6 GO:0010047 fruit dehiscence(GO:0010047)
0.3 1.6 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.3 3.7 GO:0030488 tRNA methylation(GO:0030488)
0.3 2.4 GO:0007140 male meiosis(GO:0007140)
0.3 2.1 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.3 2.6 GO:0080110 sporopollenin biosynthetic process(GO:0080110)
0.3 6.2 GO:0010928 regulation of auxin mediated signaling pathway(GO:0010928)
0.3 0.3 GO:0019367 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.3 0.8 GO:0010184 cytokinin transport(GO:0010184)
0.3 1.3 GO:0048871 multicellular organismal homeostasis(GO:0048871)
0.3 5.3 GO:0042335 cuticle development(GO:0042335)
0.3 0.5 GO:0072526 pyridine-containing compound catabolic process(GO:0072526)
0.2 3.0 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.2 1.7 GO:2000601 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.2 1.0 GO:0015739 sialic acid transport(GO:0015739)
0.2 1.7 GO:0009099 valine biosynthetic process(GO:0009099)
0.2 8.0 GO:0006730 one-carbon metabolic process(GO:0006730)
0.2 0.5 GO:0045682 regulation of epithelial cell differentiation(GO:0030856) regulation of epidermal cell differentiation(GO:0045604) regulation of epidermis development(GO:0045682)
0.2 1.0 GO:0071323 cellular response to chitin(GO:0071323)
0.2 1.2 GO:0010360 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.2 2.1 GO:0033206 meiotic cytokinesis(GO:0033206)
0.2 4.0 GO:0000373 Group II intron splicing(GO:0000373)
0.2 1.4 GO:0006013 mannose metabolic process(GO:0006013)
0.2 30.1 GO:0015979 photosynthesis(GO:0015979)
0.2 1.2 GO:0015939 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.2 0.9 GO:0060145 viral gene silencing in virus induced gene silencing(GO:0060145)
0.2 7.1 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.2 2.0 GO:2000071 regulation of defense response by callose deposition(GO:2000071)
0.2 1.4 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.2 0.9 GO:0031110 regulation of microtubule polymerization or depolymerization(GO:0031110)
0.2 3.1 GO:0009704 de-etiolation(GO:0009704)
0.2 0.9 GO:0010338 leaf formation(GO:0010338)
0.2 1.1 GO:0035864 response to potassium ion(GO:0035864)
0.2 2.2 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.2 0.6 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.2 2.3 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.2 1.3 GO:0051096 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.2 1.2 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.2 3.3 GO:0051346 negative regulation of hydrolase activity(GO:0051346)
0.2 0.8 GO:0098740 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.2 2.0 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.2 1.0 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.2 2.7 GO:0010274 hydrotropism(GO:0010274)
0.2 0.8 GO:0007349 cellularization(GO:0007349)
0.2 0.8 GO:0048462 carpel formation(GO:0048462)
0.2 0.8 GO:0099636 cytoplasmic streaming(GO:0099636)
0.2 1.7 GO:0009799 specification of symmetry(GO:0009799)
0.2 0.7 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.2 1.1 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.2 0.6 GO:0010124 phenylacetate catabolic process(GO:0010124)
0.2 1.8 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.2 2.7 GO:0052541 plant-type cell wall cellulose metabolic process(GO:0052541)
0.2 0.5 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.2 6.6 GO:0045489 pectin biosynthetic process(GO:0045489)
0.2 2.1 GO:0009641 shade avoidance(GO:0009641)
0.2 0.2 GO:1901333 positive regulation of lateral root development(GO:1901333)
0.2 0.5 GO:0033567 DNA replication, Okazaki fragment processing(GO:0033567)
0.2 1.0 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.2 1.3 GO:0080028 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.2 0.5 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.2 2.4 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.2 0.8 GO:0097036 regulation of plasma membrane sterol distribution(GO:0097036)
0.2 3.2 GO:0006744 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.2 2.8 GO:0019852 L-ascorbic acid metabolic process(GO:0019852) L-ascorbic acid biosynthetic process(GO:0019853)
0.2 0.5 GO:0035493 SNARE complex assembly(GO:0035493)
0.2 1.2 GO:0010358 leaf shaping(GO:0010358)
0.2 0.5 GO:0034389 lipid particle organization(GO:0034389)
0.2 0.5 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.1 0.7 GO:0080009 mRNA methylation(GO:0080009)
0.1 4.6 GO:0031122 cytoplasmic microtubule organization(GO:0031122)
0.1 0.6 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.1 0.4 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.1 4.9 GO:0051225 spindle assembly(GO:0051225)
0.1 8.3 GO:0009664 plant-type cell wall organization(GO:0009664)
0.1 0.4 GO:0010028 xanthophyll cycle(GO:0010028)
0.1 0.9 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.1 0.4 GO:0048480 style development(GO:0048479) stigma development(GO:0048480)
0.1 2.9 GO:0005983 starch catabolic process(GO:0005983)
0.1 1.0 GO:0009094 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.1 0.7 GO:0071490 far-red light signaling pathway(GO:0010018) cellular response to far red light(GO:0071490)
0.1 0.3 GO:1901672 positive regulation of systemic acquired resistance(GO:1901672)
0.1 2.4 GO:0010187 negative regulation of seed germination(GO:0010187)
0.1 1.7 GO:0008544 epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855)
0.1 0.3 GO:0090342 regulation of cell aging(GO:0090342)
0.1 6.9 GO:0010114 response to red light(GO:0010114)
0.1 2.8 GO:0008284 positive regulation of cell proliferation(GO:0008284)
0.1 5.7 GO:0048825 cotyledon development(GO:0048825)
0.1 3.7 GO:0006284 base-excision repair(GO:0006284)
0.1 0.6 GO:0006449 regulation of translational termination(GO:0006449)
0.1 3.6 GO:2000030 regulation of response to red or far red light(GO:2000030)
0.1 0.5 GO:0006409 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.1 0.4 GO:0019747 regulation of isoprenoid metabolic process(GO:0019747)
0.1 1.3 GO:0045861 negative regulation of proteolysis(GO:0045861)
0.1 1.2 GO:0043171 peptide catabolic process(GO:0043171)
0.1 0.3 GO:0009270 response to humidity(GO:0009270)
0.1 0.2 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.1 1.3 GO:0042793 transcription from plastid promoter(GO:0042793)
0.1 0.5 GO:0032012 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.1 0.9 GO:0051446 positive regulation of meiotic cell cycle(GO:0051446)
0.1 1.4 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.1 0.9 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.1 0.3 GO:0033259 plastid DNA metabolic process(GO:0033258) plastid DNA replication(GO:0033259)
0.1 1.0 GO:2000032 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.1 1.2 GO:0009944 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.1 1.4 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.1 1.1 GO:0010143 cutin biosynthetic process(GO:0010143)
0.1 0.1 GO:0010500 transmitting tissue development(GO:0010500)
0.1 0.3 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.1 0.9 GO:0046654 folic acid-containing compound biosynthetic process(GO:0009396) tetrahydrofolate biosynthetic process(GO:0046654)
0.1 1.7 GO:0006814 sodium ion transport(GO:0006814)
0.1 8.2 GO:0080167 response to karrikin(GO:0080167)
0.1 0.5 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.1 0.4 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.1 1.8 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.1 0.4 GO:0007043 cell-cell junction assembly(GO:0007043)
0.1 6.1 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.1 2.6 GO:0006891 intra-Golgi vesicle-mediated transport(GO:0006891)
0.1 0.4 GO:2001293 malonyl-CoA metabolic process(GO:2001293)
0.1 2.4 GO:0051453 regulation of cellular pH(GO:0030641) regulation of intracellular pH(GO:0051453)
0.1 0.3 GO:0015755 hexose transport(GO:0008645) fructose transport(GO:0015755)
0.1 2.6 GO:0009838 abscission(GO:0009838)
0.1 3.0 GO:0016128 phytosteroid metabolic process(GO:0016128) brassinosteroid metabolic process(GO:0016131)
0.1 0.2 GO:2001006 regulation of beta-glucan metabolic process(GO:0032950) regulation of beta-glucan biosynthetic process(GO:0032951) regulation of cellulose biosynthetic process(GO:2001006)
0.1 0.3 GO:0000187 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.1 0.2 GO:0045839 negative regulation of mitotic nuclear division(GO:0045839)
0.1 0.3 GO:0010589 leaf proximal/distal pattern formation(GO:0010589)
0.1 0.2 GO:0046683 response to organophosphorus(GO:0046683)
0.1 0.6 GO:0097577 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.1 2.1 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.1 0.4 GO:0009807 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.1 1.1 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.1 0.3 GO:0016560 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.1 0.3 GO:0042344 indole glucosinolate catabolic process(GO:0042344)
0.1 1.7 GO:0010027 thylakoid membrane organization(GO:0010027)
0.1 1.2 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.1 1.8 GO:0019915 lipid storage(GO:0019915)
0.1 1.2 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.1 1.1 GO:0052803 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.1 0.5 GO:0010359 regulation of anion channel activity(GO:0010359)
0.1 0.2 GO:1902533 positive regulation of intracellular signal transduction(GO:1902533)
0.1 0.8 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.1 0.4 GO:0051782 negative regulation of cell division(GO:0051782)
0.1 1.2 GO:0046688 response to copper ion(GO:0046688)
0.1 0.9 GO:0006384 transcription initiation from RNA polymerase III promoter(GO:0006384)
0.1 0.9 GO:0018126 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.1 0.4 GO:0045003 double-strand break repair via synthesis-dependent strand annealing(GO:0045003)
0.1 0.7 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.1 3.4 GO:0007018 microtubule-based movement(GO:0007018)
0.1 0.2 GO:0032979 protein insertion into membrane from inner side(GO:0032978) protein insertion into mitochondrial membrane from inner side(GO:0032979) protein insertion into mitochondrial membrane(GO:0051204)
0.1 0.2 GO:0033477 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.1 0.6 GO:0001934 positive regulation of protein phosphorylation(GO:0001934)
0.1 0.7 GO:0031425 chloroplast RNA processing(GO:0031425)
0.1 1.8 GO:0009902 chloroplast relocation(GO:0009902) establishment of plastid localization(GO:0051667)
0.1 0.9 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.1 0.6 GO:0051592 response to calcium ion(GO:0051592)
0.1 0.3 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.1 0.2 GO:0006361 transcription initiation from RNA polymerase I promoter(GO:0006361)
0.1 0.6 GO:0048829 root cap development(GO:0048829)
0.1 0.6 GO:0051026 chiasma assembly(GO:0051026)
0.1 0.8 GO:1900865 chloroplast RNA modification(GO:1900865)
0.1 1.2 GO:1901068 guanosine-containing compound metabolic process(GO:1901068)
0.1 0.3 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.1 0.6 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.1 1.6 GO:0006885 regulation of pH(GO:0006885)
0.1 1.1 GO:0035825 reciprocal meiotic recombination(GO:0007131) reciprocal DNA recombination(GO:0035825)
0.1 0.6 GO:0007584 response to nutrient(GO:0007584)
0.1 0.5 GO:0051984 positive regulation of chromosome segregation(GO:0051984)
0.1 0.9 GO:0010584 pollen exine formation(GO:0010584)
0.1 0.4 GO:0009920 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920)
0.1 0.5 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.1 1.8 GO:0009559 embryo sac central cell differentiation(GO:0009559)
0.0 0.6 GO:0048572 short-day photoperiodism(GO:0048572) short-day photoperiodism, flowering(GO:0048575)
0.0 0.1 GO:0043467 regulation of generation of precursor metabolites and energy(GO:0043467)
0.0 0.8 GO:0080022 primary root development(GO:0080022)
0.0 1.7 GO:0010311 lateral root formation(GO:0010311)
0.0 0.5 GO:0010044 response to aluminum ion(GO:0010044)
0.0 1.3 GO:0007062 sister chromatid cohesion(GO:0007062)
0.0 0.1 GO:0090480 GDP-mannose transport(GO:0015784) purine nucleotide-sugar transmembrane transport(GO:0090480) GDP-mannose transmembrane transport(GO:1990570)
0.0 0.4 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.0 1.0 GO:0010582 floral meristem determinacy(GO:0010582)
0.0 0.2 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.0 0.4 GO:0000077 DNA damage checkpoint(GO:0000077)
0.0 0.3 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.8 GO:0006722 triterpenoid metabolic process(GO:0006722)
0.0 0.6 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.0 0.6 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0 1.1 GO:0099518 vesicle transport along actin filament(GO:0030050) cytoskeleton-dependent intracellular transport(GO:0030705) actin filament-based transport(GO:0099515) vesicle cytoskeletal trafficking(GO:0099518)
0.0 0.1 GO:0042908 xenobiotic transport(GO:0042908)
0.0 0.4 GO:0009098 leucine biosynthetic process(GO:0009098)
0.0 0.9 GO:0009734 auxin-activated signaling pathway(GO:0009734)
0.0 0.5 GO:0009958 positive gravitropism(GO:0009958)
0.0 0.1 GO:0046443 FAD metabolic process(GO:0046443)
0.0 0.4 GO:0006270 DNA replication initiation(GO:0006270)
0.0 0.1 GO:0048830 adventitious root development(GO:0048830)
0.0 0.4 GO:0006465 signal peptide processing(GO:0006465)
0.0 0.3 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.0 0.8 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.4 GO:0000819 sister chromatid segregation(GO:0000819)
0.0 0.1 GO:0071585 detoxification of cadmium ion(GO:0071585)
0.0 0.1 GO:0015824 proline transport(GO:0015824)
0.0 0.3 GO:0010082 regulation of root meristem growth(GO:0010082)
0.0 0.3 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 0.1 GO:0007023 post-chaperonin tubulin folding pathway(GO:0007023)
0.0 0.0 GO:0061013 regulation of mRNA catabolic process(GO:0061013) positive regulation of mRNA catabolic process(GO:0061014)
0.0 0.7 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413) peptidyl-proline modification(GO:0018208)
0.0 0.3 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.0 0.1 GO:0044205 'de novo' UMP biosynthetic process(GO:0044205)
0.0 0.4 GO:0006863 purine nucleobase transport(GO:0006863)
0.0 0.3 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596) protein localization to chloroplast(GO:0072598)
0.0 1.0 GO:0009567 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.0 0.1 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.0 0.1 GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA(GO:0000290)
0.0 0.0 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.0 0.8 GO:0048528 post-embryonic root development(GO:0048528)
0.0 0.3 GO:0015850 organic hydroxy compound transport(GO:0015850)
0.0 0.1 GO:0042946 glucoside transport(GO:0042946) glycoside transport(GO:1901656)
0.0 0.2 GO:0001709 cell fate determination(GO:0001709)
0.0 0.0 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.0 5.1 GO:0006412 translation(GO:0006412)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 6.2 GO:0009897 external side of plasma membrane(GO:0009897)
1.2 48.7 GO:0010319 stromule(GO:0010319)
1.0 4.1 GO:0009509 chromoplast(GO:0009509)
0.8 4.1 GO:0005960 glycine cleavage complex(GO:0005960)
0.6 4.4 GO:0000311 plastid large ribosomal subunit(GO:0000311)
0.6 2.4 GO:1990752 microtubule end(GO:1990752)
0.6 2.8 GO:0043036 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.5 1.5 GO:0016328 lateral plasma membrane(GO:0016328)
0.5 75.5 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.5 1.4 GO:0010007 magnesium chelatase complex(GO:0010007)
0.5 11.8 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.4 4.0 GO:0010369 chromocenter(GO:0010369)
0.4 19.5 GO:0031977 thylakoid lumen(GO:0031977)
0.4 1.5 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.4 1.1 GO:0010330 cellulose synthase complex(GO:0010330)
0.4 3.6 GO:0016272 prefoldin complex(GO:0016272)
0.4 20.8 GO:0009528 plastid inner membrane(GO:0009528)
0.3 1.7 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.3 1.0 GO:0032432 actin filament bundle(GO:0032432)
0.3 5.9 GO:0009531 secondary cell wall(GO:0009531)
0.3 2.7 GO:0009538 photosystem I reaction center(GO:0009538)
0.3 1.3 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)
0.3 0.9 GO:1990298 bub1-bub3 complex(GO:1990298)
0.3 113.1 GO:0009579 thylakoid(GO:0009579)
0.3 5.4 GO:0072686 mitotic spindle(GO:0072686)
0.3 1.2 GO:0005884 actin filament(GO:0005884)
0.3 3.3 GO:0005880 nuclear microtubule(GO:0005880)
0.3 6.5 GO:0016324 apical plasma membrane(GO:0016324)
0.3 0.8 GO:0030896 checkpoint clamp complex(GO:0030896)
0.2 2.4 GO:0031209 SCAR complex(GO:0031209)
0.2 2.4 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.2 1.7 GO:0005787 signal peptidase complex(GO:0005787)
0.2 2.5 GO:0009986 cell surface(GO:0009986)
0.2 52.3 GO:0048046 apoplast(GO:0048046)
0.2 35.3 GO:0009505 plant-type cell wall(GO:0009505)
0.2 1.1 GO:0033061 DNA recombinase mediator complex(GO:0033061)
0.2 0.6 GO:0044614 nuclear pore cytoplasmic filaments(GO:0044614)
0.2 1.0 GO:0030139 endocytic vesicle(GO:0030139)
0.2 4.0 GO:0005871 kinesin complex(GO:0005871)
0.2 10.1 GO:0031969 chloroplast membrane(GO:0031969)
0.2 0.7 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.2 1.8 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.2 0.3 GO:0005828 kinetochore microtubule(GO:0005828)
0.2 8.2 GO:0005797 Golgi medial cisterna(GO:0005797)
0.1 1.4 GO:0005720 nuclear heterochromatin(GO:0005720)
0.1 1.7 GO:0009508 plastid chromosome(GO:0009508)
0.1 0.9 GO:0031298 replication fork protection complex(GO:0031298)
0.1 1.2 GO:0042555 MCM complex(GO:0042555)
0.1 31.8 GO:0009941 chloroplast envelope(GO:0009941)
0.1 0.8 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.1 24.9 GO:0005802 trans-Golgi network(GO:0005802)
0.1 1.2 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.1 0.3 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.1 1.1 GO:0005663 DNA replication factor C complex(GO:0005663)
0.1 0.6 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.1 0.3 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.1 0.8 GO:0032300 mismatch repair complex(GO:0032300)
0.1 9.0 GO:0031225 anchored component of membrane(GO:0031225)
0.1 1.4 GO:0031304 intrinsic component of mitochondrial inner membrane(GO:0031304)
0.1 0.8 GO:0000795 synaptonemal complex(GO:0000795)
0.1 0.4 GO:0000796 condensin complex(GO:0000796)
0.1 0.3 GO:0033263 CORVET complex(GO:0033263)
0.1 0.8 GO:0031965 nuclear membrane(GO:0031965)
0.1 8.0 GO:0005618 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.1 1.3 GO:0005657 replication fork(GO:0005657)
0.1 6.4 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.0 1.3 GO:0009504 cell plate(GO:0009504)
0.0 2.6 GO:0005874 microtubule(GO:0005874)
0.0 0.3 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.0 0.3 GO:0045298 tubulin complex(GO:0045298)
0.0 0.6 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 0.3 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 0.2 GO:0030906 retromer, cargo-selective complex(GO:0030906)
0.0 2.2 GO:0016607 nuclear speck(GO:0016607)
0.0 74.8 GO:0005576 extracellular region(GO:0005576)
0.0 0.2 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.0 0.2 GO:0005664 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.0 0.7 GO:0015934 large ribosomal subunit(GO:0015934)
0.0 0.3 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.0 0.5 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 0.1 GO:0005850 eukaryotic translation initiation factor 2 complex(GO:0005850)
0.0 0.1 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.0 0.2 GO:0000784 nuclear chromosome, telomeric region(GO:0000784)
0.0 0.4 GO:0012506 vesicle membrane(GO:0012506)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.8 8.3 GO:0015204 urea transmembrane transporter activity(GO:0015204)
2.2 13.0 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
2.1 6.4 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
1.9 26.0 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
1.8 5.5 GO:0009924 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
1.4 5.7 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
1.2 3.7 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
1.2 3.6 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
1.2 6.0 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
1.1 34.9 GO:0004089 carbonate dehydratase activity(GO:0004089)
1.0 6.1 GO:0015120 phosphoglycerate transmembrane transporter activity(GO:0015120) aldonate transmembrane transporter activity(GO:0042879)
1.0 4.0 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.9 2.7 GO:0016802 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.8 3.3 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.8 20.9 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.8 3.3 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.8 4.0 GO:0004001 adenosine kinase activity(GO:0004001)
0.8 3.0 GO:0009784 transmembrane receptor histidine kinase activity(GO:0009784) transmembrane histidine kinase cytokinin receptor activity(GO:0009885)
0.8 3.0 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.7 2.2 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.7 5.9 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.7 2.9 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.7 3.6 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.7 1.4 GO:0016801 hydrolase activity, acting on ether bonds(GO:0016801)
0.7 2.1 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.7 0.7 GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.7 2.1 GO:0010242 oxygen evolving activity(GO:0010242)
0.7 2.7 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.7 1.3 GO:0047912 galacturonokinase activity(GO:0047912)
0.6 18.0 GO:0008266 poly(U) RNA binding(GO:0008266)
0.6 20.0 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.6 4.2 GO:0008169 C-methyltransferase activity(GO:0008169)
0.6 2.3 GO:0052924 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.6 1.7 GO:0004462 lactoylglutathione lyase activity(GO:0004462)
0.6 1.1 GO:0004359 glutaminase activity(GO:0004359)
0.6 2.2 GO:0070402 NADPH binding(GO:0070402)
0.5 6.7 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.5 3.1 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.5 4.6 GO:0010428 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.5 4.1 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.5 13.0 GO:0016168 chlorophyll binding(GO:0016168)
0.5 2.0 GO:0004556 alpha-amylase activity(GO:0004556)
0.5 2.9 GO:0003913 DNA photolyase activity(GO:0003913)
0.5 3.4 GO:0008200 ion channel inhibitor activity(GO:0008200) channel inhibitor activity(GO:0016248) sodium channel regulator activity(GO:0017080) sodium channel inhibitor activity(GO:0019871)
0.5 12.0 GO:0004565 beta-galactosidase activity(GO:0004565)
0.5 1.4 GO:0071614 linoleic acid epoxygenase activity(GO:0071614)
0.4 1.3 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.4 1.3 GO:0051010 microtubule plus-end binding(GO:0051010)
0.4 2.6 GO:0051723 protein methylesterase activity(GO:0051723)
0.4 5.5 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.4 1.3 GO:0016842 amidine-lyase activity(GO:0016842)
0.4 2.0 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.4 7.8 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.4 5.3 GO:0080161 auxin efflux transmembrane transporter activity(GO:0010329) auxin transmembrane transporter activity(GO:0080161)
0.4 1.5 GO:0015245 fatty acid transporter activity(GO:0015245)
0.4 3.0 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.4 1.1 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.4 2.6 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.4 4.4 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.4 4.8 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.4 2.2 GO:0051753 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.4 1.1 GO:0009374 biotin binding(GO:0009374)
0.4 2.5 GO:0003885 D-arabinono-1,4-lactone oxidase activity(GO:0003885)
0.3 1.0 GO:1990518 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.3 9.3 GO:0008810 cellulase activity(GO:0008810)
0.3 21.9 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.3 2.7 GO:0004619 phosphoglycerate mutase activity(GO:0004619)
0.3 2.7 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.3 3.9 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.3 3.6 GO:0016721 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.3 1.6 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.3 1.3 GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity(GO:0047334)
0.3 0.9 GO:0045430 chalcone isomerase activity(GO:0045430)
0.3 3.4 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.3 0.9 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.3 0.9 GO:0004156 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity(GO:0003848) dihydropteroate synthase activity(GO:0004156)
0.3 2.7 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.3 1.5 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.3 1.8 GO:0050017 L-3-cyanoalanine synthase activity(GO:0050017)
0.3 1.5 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.3 1.4 GO:0042085 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.3 1.1 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.3 1.7 GO:0052654 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.3 0.8 GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity(GO:0003864)
0.3 1.4 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.3 0.8 GO:0000064 L-ornithine transmembrane transporter activity(GO:0000064)
0.3 1.1 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.3 1.1 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.3 9.0 GO:0005179 hormone activity(GO:0005179)
0.3 1.6 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.3 1.3 GO:0004127 cytidylate kinase activity(GO:0004127)
0.3 1.0 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.2 5.0 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.2 2.0 GO:0008083 growth factor activity(GO:0008083)
0.2 0.7 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.2 1.7 GO:0051018 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.2 1.0 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.2 1.2 GO:0010313 phytochrome binding(GO:0010313)
0.2 1.0 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.2 1.0 GO:0016882 cyclo-ligase activity(GO:0016882)
0.2 1.4 GO:0016851 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.2 0.9 GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.2 0.7 GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.2 1.4 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.2 2.4 GO:0008725 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.2 2.1 GO:0008379 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.2 0.4 GO:0005315 inorganic phosphate transmembrane transporter activity(GO:0005315)
0.2 1.1 GO:0043682 copper-transporting ATPase activity(GO:0043682)
0.2 10.1 GO:0016759 cellulose synthase activity(GO:0016759)
0.2 0.8 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.2 0.6 GO:0035591 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.2 0.6 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.2 0.6 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.2 5.7 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.2 1.2 GO:0019904 protein domain specific binding(GO:0019904)
0.2 2.7 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.2 3.7 GO:0030599 pectinesterase activity(GO:0030599)
0.2 0.8 GO:0030742 GTP-dependent protein binding(GO:0030742)
0.2 0.8 GO:0070182 DNA polymerase binding(GO:0070182)
0.2 1.7 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.2 0.6 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.2 0.4 GO:0008821 crossover junction endodeoxyribonuclease activity(GO:0008821)
0.2 0.9 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.2 0.7 GO:0045181 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.2 0.9 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)
0.2 0.7 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.2 1.4 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.2 1.7 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.2 1.2 GO:0016872 intramolecular lyase activity(GO:0016872)
0.2 0.9 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.2 0.8 GO:0004049 anthranilate synthase activity(GO:0004049)
0.2 0.8 GO:0051019 mitogen-activated protein kinase binding(GO:0051019)
0.2 1.1 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.2 3.5 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.2 1.3 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.2 1.9 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.2 2.4 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.1 0.6 GO:0052743 inositol-polyphosphate 5-phosphatase activity(GO:0004445) inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity(GO:0052659) inositol tetrakisphosphate phosphatase activity(GO:0052743)
0.1 2.7 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.1 0.7 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.1 1.1 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 7.4 GO:0070001 aspartic-type peptidase activity(GO:0070001)
0.1 1.4 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.1 0.7 GO:0034511 U3 snoRNA binding(GO:0034511)
0.1 0.5 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.1 2.6 GO:0000822 inositol hexakisphosphate binding(GO:0000822)
0.1 0.7 GO:0000150 recombinase activity(GO:0000150)
0.1 1.2 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069)
0.1 0.4 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
0.1 1.1 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.1 0.5 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.1 1.0 GO:0019137 thioglucosidase activity(GO:0019137)
0.1 1.0 GO:0004340 glucokinase activity(GO:0004340) glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.1 1.2 GO:0009378 four-way junction helicase activity(GO:0009378)
0.1 1.0 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.1 0.4 GO:0004645 phosphorylase activity(GO:0004645)
0.1 0.7 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 1.2 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.1 8.3 GO:0003777 microtubule motor activity(GO:0003777)
0.1 1.4 GO:0016774 phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.1 3.2 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.1 3.8 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 8.0 GO:0008017 microtubule binding(GO:0008017)
0.1 0.5 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
0.1 0.4 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.1 0.5 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.1 1.1 GO:0019843 rRNA binding(GO:0019843)
0.1 5.9 GO:0001871 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.1 0.5 GO:0070035 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.1 1.4 GO:0003688 DNA replication origin binding(GO:0003688)
0.1 0.4 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.1 1.4 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.1 0.4 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.1 2.9 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 0.5 GO:0097001 sphingolipid binding(GO:0046625) ceramide binding(GO:0097001)
0.1 0.4 GO:0003989 acetyl-CoA carboxylase activity(GO:0003989)
0.1 1.5 GO:0030276 clathrin binding(GO:0030276)
0.1 0.3 GO:0019003 GDP binding(GO:0019003)
0.1 1.2 GO:0030674 protein binding, bridging(GO:0030674)
0.1 1.1 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 2.9 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.1 3.8 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.1 1.5 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.1 0.6 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 0.7 GO:0004124 cysteine synthase activity(GO:0004124)
0.1 3.0 GO:0019203 carbohydrate phosphatase activity(GO:0019203)
0.1 2.6 GO:0018024 histone-lysine N-methyltransferase activity(GO:0018024)
0.1 9.2 GO:0009055 electron carrier activity(GO:0009055)
0.1 1.0 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 7.6 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.1 0.9 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.1 17.3 GO:0003735 structural constituent of ribosome(GO:0003735)
0.1 0.3 GO:0005353 fructose transmembrane transporter activity(GO:0005353)
0.1 1.0 GO:0035250 UDP-galactosyltransferase activity(GO:0035250)
0.1 0.9 GO:0019798 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798) peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.1 0.6 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.1 0.2 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.1 0.2 GO:0032135 DNA insertion or deletion binding(GO:0032135)
0.1 1.4 GO:0102338 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.1 0.5 GO:0017048 Rho GTPase binding(GO:0017048)
0.1 0.3 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.1 0.4 GO:0017022 myosin binding(GO:0017022)
0.1 3.5 GO:0004650 polygalacturonase activity(GO:0004650)
0.1 0.7 GO:0008327 methyl-CpG binding(GO:0008327)
0.1 0.8 GO:0051184 cofactor transporter activity(GO:0051184)
0.1 2.4 GO:0008483 transaminase activity(GO:0008483)
0.0 1.4 GO:0009975 cyclase activity(GO:0009975)
0.0 0.9 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.0 0.2 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.0 1.1 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 1.9 GO:0003678 DNA helicase activity(GO:0003678)
0.0 0.8 GO:0015248 sterol transporter activity(GO:0015248)
0.0 0.3 GO:0048487 beta-tubulin binding(GO:0048487)
0.0 0.9 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.3 GO:0017091 AU-rich element binding(GO:0017091)
0.0 0.1 GO:0005458 GDP-mannose transmembrane transporter activity(GO:0005458)
0.0 0.7 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 0.5 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.0 0.5 GO:0035529 NADH pyrophosphatase activity(GO:0035529)
0.0 0.5 GO:0005504 fatty acid binding(GO:0005504)
0.0 0.2 GO:0000990 transcription factor activity, core RNA polymerase binding(GO:0000990)
0.0 0.2 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.0 1.3 GO:0005319 lipid transporter activity(GO:0005319)
0.0 1.8 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.1 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.0 0.2 GO:0004325 ferrochelatase activity(GO:0004325)
0.0 1.1 GO:0000146 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 0.3 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 0.2 GO:0070905 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.0 0.1 GO:0042895 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.0 1.5 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.4 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 0.0 GO:0000400 four-way junction DNA binding(GO:0000400)
0.0 0.2 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.0 0.4 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.0 0.6 GO:0005199 structural constituent of cell wall(GO:0005199)
0.0 0.2 GO:0004792 thiosulfate sulfurtransferase activity(GO:0004792)
0.0 1.7 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.2 GO:0015462 protein-transmembrane transporting ATPase activity(GO:0015462)
0.0 0.1 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.0 1.5 GO:0004185 serine-type carboxypeptidase activity(GO:0004185) serine-type exopeptidase activity(GO:0070008)
0.0 0.3 GO:0008378 galactosyltransferase activity(GO:0008378)
0.0 3.7 GO:0008168 methyltransferase activity(GO:0008168)
0.0 1.0 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.1 GO:0050377 UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.0 0.2 GO:0032977 membrane insertase activity(GO:0032977)
0.0 0.3 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.2 GO:0016783 sulfurtransferase activity(GO:0016783)
0.0 0.2 GO:0004849 uridine kinase activity(GO:0004849)
0.0 0.2 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)
0.0 0.3 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.0 0.3 GO:0019104 DNA N-glycosylase activity(GO:0019104)
0.0 0.3 GO:0097599 xylanase activity(GO:0097599)
0.0 0.1 GO:0016635 oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor(GO:0016635)
0.0 0.3 GO:0031420 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.0 0.1 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.0 0.7 GO:0005262 calcium channel activity(GO:0005262)
0.0 0.9 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 0.7 GO:0008408 3'-5' exonuclease activity(GO:0008408)
0.0 0.2 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 0.9 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 0.0 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.0 0.0 GO:0052629 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.0 0.1 GO:0005274 allantoin uptake transmembrane transporter activity(GO:0005274) pyrimidine nucleobase transmembrane transporter activity(GO:0005350) uracil transmembrane transporter activity(GO:0015210) uracil:cation symporter activity(GO:0015505) uptake transmembrane transporter activity(GO:0015563)
0.0 0.1 GO:0004312 fatty acid synthase activity(GO:0004312)
0.0 0.3 GO:0051087 chaperone binding(GO:0051087)
0.0 0.1 GO:0016742 hydroxymethyl-, formyl- and related transferase activity(GO:0016742)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
3.1 24.8 PID CMYB PATHWAY C-MYB transcription factor network
1.2 4.9 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.7 1.4 PID AP1 PATHWAY AP-1 transcription factor network
0.5 1.4 PID P53 REGULATION PATHWAY p53 pathway
0.4 1.3 PID TCPTP PATHWAY Signaling events mediated by TCPTP
0.2 1.9 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.1 0.7 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway
0.1 1.5 PID E2F PATHWAY E2F transcription factor network
0.1 1.4 PID FANCONI PATHWAY Fanconi anemia pathway
0.1 0.4 PID IFNG PATHWAY IFN-gamma pathway
0.1 0.7 PID AJDISS 2PATHWAY Posttranslational regulation of adherens junction stability and dissassembly

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
4.0 23.7 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
1.7 5.0 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
0.4 1.1 REACTOME CELL CYCLE CHECKPOINTS Genes involved in Cell Cycle Checkpoints
0.4 1.4 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.3 2.1 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.3 1.0 REACTOME PREFOLDIN MEDIATED TRANSFER OF SUBSTRATE TO CCT TRIC Genes involved in Prefoldin mediated transfer of substrate to CCT/TriC
0.3 1.6 REACTOME G1 S SPECIFIC TRANSCRIPTION Genes involved in G1/S-Specific Transcription
0.3 0.8 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.2 2.2 REACTOME M G1 TRANSITION Genes involved in M/G1 Transition
0.2 1.2 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.2 0.5 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.2 2.6 REACTOME DEVELOPMENTAL BIOLOGY Genes involved in Developmental Biology
0.2 3.8 REACTOME SRP DEPENDENT COTRANSLATIONAL PROTEIN TARGETING TO MEMBRANE Genes involved in SRP-dependent cotranslational protein targeting to membrane
0.1 0.4 REACTOME NOD1 2 SIGNALING PATHWAY Genes involved in NOD1/2 Signaling Pathway
0.1 0.6 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.1 0.7 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.0 0.3 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.0 0.7 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.0 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.0 0.0 REACTOME PI METABOLISM Genes involved in PI Metabolism