ISMARA results: AT5G51190

Project

GSE43616: Time-course of wild-type Arabidopsis leaf

Navigation

Downloads

Results for AT5G51190

Z-value: 0.15

Transcription factors associated with AT5G51190

Gene Symbol	Gene ID	Gene Info
AT5G51190 TAIR	AT5G51190	Integrase-type DNA-binding superfamily protein

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
AT5G51190	arTal_v1_Chr5_-_20801437_20801437	0.15	4.5e-01	Click!

Activity profile of AT5G51190 motif

Sorted Z-values of AT5G51190 motif

Top targets:

Search:

Show entries

Promoter	Log-likelihood	Transcript	Gene	Gene Info
arTal_v1_Chr3_+_3203988_3203988 Show fit	0.21	AT3G10340.1	PAL4 TAIR Show fit	phenylalanine ammonia-lyase 4
arTal_v1_Chr1_+_22835078_22835078 Show fit	0.14	AT1G61820.1	BGLU46 TAIR Show fit	beta glucosidase 46
arTal_v1_Chr1_+_22836327_22836327 Show fit	0.13	AT1G61820.3	BGLU46 TAIR Show fit	beta glucosidase 46
arTal_v1_Chr2_-_15589369_15589369 Show fit	0.11	AT2G37090.1	IRX9 TAIR Show fit	Nucleotide-diphospho-sugar transferases superfamily protein
arTal_v1_Chr5_+_5084524_5084695 Show fit	0.10	AT5G15630.1 AT5G15630.2 AT5G15630.3 AT5G15630.4 AT5G15630.5	IRX6 TAIR Show fit	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
arTal_v1_Chr1_+_27076020_27076020 Show fit	0.06	AT1G71930.1	VND7 TAIR Show fit	vascular related NAC-domain protein 7
arTal_v1_Chr1_+_27074702_27074702 Show fit	0.05	AT1G71930.2	VND7 TAIR Show fit	vascular related NAC-domain protein 7
arTal_v1_Chr5_-_4065075_4065075 Show fit	0.03	AT5G12870.1	MYB46 TAIR Show fit	myb domain protein 46

Showing 1 to 8 of 8 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G51190

View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0009800	cinnamic acid biosynthetic process(GO:0009800)
0.0	0.1	GO:0090059	protoxylem development(GO:0090059)

Showing 1 to 2 of 2 entries

Gene overrepresentation in molecular function category:

Search:

Show entries

Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.3	GO:0047782	coniferin beta-glucosidase activity(GO:0047782)
0.1	0.2	GO:0045548	phenylalanine ammonia-lyase activity(GO:0045548)
0.0	0.1	GO:0015018	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018) 1,4-beta-D-xylan synthase activity(GO:0047517)

Showing 1 to 3 of 3 entries