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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G50670

Z-value: 0.70

Transcription factors associated with AT5G50670

Gene Symbol Gene ID Gene Info
AT5G50670
AT5G50670 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
SPL13BarTal_v1_Chr5_-_20617538_20617538-0.679.5e-05Click!

Activity profile of AT5G50670 motif

Sorted Z-values of AT5G50670 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_-_18098633 2.38 AT4G38770.1
PRP4
proline-rich protein 4
Chr1_-_29635931 2.15 AT1G78820.1
AT1G78820
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Chr5_-_25343369 1.97 AT5G63180.1
AT5G63180
Pectin lyase-like superfamily protein
Chr5_-_21092410 1.67 AT5G51890.1
AT5G51890
Peroxidase superfamily protein
Chr5_+_26767599 1.66 AT5G67070.1
RALFL34
ralf-like 34
Chr4_-_846792 1.64 AT4G01950.1
AT4G01950.2
GPAT3
glycerol-3-phosphate acyltransferase 3
Chr1_+_28053030 1.63 AT1G74670.1
GASA6
Gibberellin-regulated family protein
Chr5_+_21020014 1.62 AT5G51750.1
SBT1.3
subtilase 1.3
Chr1_+_20614573 1.49 AT1G55260.1
AT1G55260.2
AT1G55260
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_1293723 1.42 AT5G04530.1
KCS19
3-ketoacyl-CoA synthase 19
Chr2_-_19563960 1.39 AT2G47750.1
GH3.9
putative indole-3-acetic acid-amido synthetase GH3.9
Chr1_+_11343854 1.38 AT1G31690.1
AT1G31690
Copper amine oxidase family protein
Chr2_+_15934244 1.36 AT2G38080.1
IRX12
Laccase/Diphenol oxidase family protein
Chr2_-_12433796 1.33 AT2G28950.1
EXPA6
expansin A6
Chr2_-_15014147 1.32 AT2G35710.3
AT2G35710.4
AT2G35710.1
PGSIP7
Nucleotide-diphospho-sugar transferases superfamily protein
Chr4_-_17355891 1.27 AT4G36850.3
AT4G36850.4
AT4G36850.2
AT4G36850.1
AT4G36850
PQ-loop repeat family protein / transmembrane family protein
Chr2_+_14384797 1.18 AT2G34060.1
AT2G34060
Peroxidase superfamily protein
Chr1_-_3518035 1.17 AT1G10640.1
AT1G10640
Pectin lyase-like superfamily protein
Chr2_+_17325846 1.09 AT2G41540.4
AT2G41540.1
AT2G41540.2
AT2G41540.3
GPDHC1
6-phosphogluconate dehydrogenase family protein
Chr1_+_564018 1.07 AT1G02640.1
BXL2
beta-xylosidase 2
Chr1_+_1231452 1.07 AT1G04520.1
PDLP2
plasmodesmata-located protein 2
Chr1_+_1843463 1.02 AT1G06080.1
AT1G06080.2
ADS1
delta 9 desaturase 1
Chr1_-_8235019 1.02 AT1G23205.1
AT1G23205
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_+_8027294 1.01 AT1G22690.3
AT1G22690.2
AT1G22690
Gibberellin-regulated family protein
Chr4_-_524249 1.01 AT4G01250.1
WRKY22
WRKY family transcription factor
Chr5_+_1952505 1.00 AT5G06390.1
FLA17
FASCICLIN-like arabinogalactan protein 17 precursor
Chr2_-_14322082 0.99 AT2G33850.1
AT2G33850
E6-like protein
Chr4_+_8541879 0.97 AT4G14940.1
AO1
amine oxidase 1
Chr2_-_15013368 0.96 AT2G35710.2
PGSIP7
Nucleotide-diphospho-sugar transferases superfamily protein
Chr5_-_23406479 0.93 AT5G57780.1
P1R1
transcription factor
Chr1_+_8027126 0.92 AT1G22690.1
AT1G22690
Gibberellin-regulated family protein
Chr2_+_1289832 0.92 AT2G04032.1
ZIP7
zinc transporter 7 precursor
Chr2_+_19191247 0.91 AT2G46710.1
ROPGAP3
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
Chr5_-_19899301 0.91 AT5G49100.1
AT5G49100
vitellogenin-like protein
Chr1_-_1307973 0.90 AT1G04680.1
AT1G04680
Pectin lyase-like superfamily protein
Chr3_+_8624636 0.88 AT3G23890.1
AT3G23890.2
TOPII
topoisomerase II
Chr5_+_6387341 0.87 AT5G19090.1
AT5G19090.4
AT5G19090.3
AT5G19090.2
AT5G19090
Heavy metal transport/detoxification superfamily protein
Chr4_+_5839599 0.85 AT4G09160.1
AT4G09160.2
AT4G09160.3
AT4G09160
SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein
Chr4_+_15819489 0.85 AT4G32800.1
AT4G32800
Integrase-type DNA-binding superfamily protein
Chr2_+_539898 0.83 AT2G02130.1
LCR68
low-molecular-weight cysteine-rich 68
Chr3_+_1813164 0.82 AT3G06020.1
FAF4
FANTASTIC four-like protein (DUF3049)
Chr4_-_16644928 0.82 AT4G34950.1
AT4G34950
Major facilitator superfamily protein
Chr3_-_2944457 0.80 AT3G09580.1
AT3G09580
FAD/NAD(P)-binding oxidoreductase family protein
Chr1_-_26537422 0.79 AT1G70410.3
AT1G70410.1
BCA4
beta carbonic anhydrase 4
Chr1_-_26538437 0.78 AT1G70410.2
BCA4
beta carbonic anhydrase 4
Chr3_+_20196329 0.75 AT3G54560.2
HTA11
histone H2A 11
Chr3_+_4810888 0.75 AT3G14395.1
AT3G14395
hypothetical protein
Chr3_+_20301759 0.75 AT3G54820.1
PIP2%3B5
plasma membrane intrinsic protein 2;5
Chr5_+_22808641 0.75 AT5G56320.2
AT5G56320.1
AT5G56320.3
EXPA14
expansin A14
Chr3_-_18193729 0.75 AT3G49070.1
AT3G49070.2
AT3G49070
transmembrane protein, putative (DUF677)
Chr3_+_17228642 0.74 AT3G46780.1
PTAC16
plastid transcriptionally active 16
Chr1_+_21241579 0.74 AT1G56670.1
AT1G56670.2
AT1G56670
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_19897412 0.73 AT3G53680.2
AT3G53680
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
Chr4_-_12992585 0.72 AT4G25420.2
AT4G25420.1
GA20OX1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr3_+_20196140 0.72 AT3G54560.1
HTA11
histone H2A 11
Chr3_-_19897955 0.72 AT3G53680.1
AT3G53680
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein
Chr1_+_25610723 0.72 AT1G68330.1
AT1G68330
membrane-associated kinase regulator
Chr5_+_25891449 0.72 AT5G64750.1
ABR1
Integrase-type DNA-binding superfamily protein
Chr5_+_25159208 0.71 AT5G62670.1
HA11
H[+]-ATPase 11
Chr5_+_8042853 0.71 AT5G23860.1
AT5G23860.2
TUB8
tubulin beta 8
Chr3_-_9342223 0.70 AT3G25660.1
AT3G25660
Amidase family protein
Chr2_-_10835660 0.70 AT2G25460.2
AT2G25460
EEIG1/EHBP1 protein amino-terminal domain protein
Chr2_+_15686650 0.69 AT2G37380.1
MAKR3
membrane-associated kinase regulator
Chr3_+_23266227 0.68 AT3G62950.1
AT3G62950
Thioredoxin superfamily protein
Chr2_-_10835483 0.68 AT2G25460.1
AT2G25460
EEIG1/EHBP1 protein amino-terminal domain protein
Chr5_+_6387735 0.68 AT5G19090.5
AT5G19090
Heavy metal transport/detoxification superfamily protein
Chr5_+_4341262 0.68 AT5G13510.1
EMB3136
Ribosomal protein L10 family protein
Chr1_-_23251195 0.67 AT1G62780.1
AT1G62780
dimethylallyl, adenosine tRNA methylthiotransferase
Chr1_+_29178705 0.67 AT1G77640.1
AT1G77640
Integrase-type DNA-binding superfamily protein
Chr5_+_208866 0.65 AT5G01530.1
LHCB4.1
light harvesting complex photosystem II
Chr1_+_4899045 0.64 AT1G14345.1
AT1G14345
NAD(P)-linked oxidoreductase superfamily protein
Chr3_-_23367592 0.63 AT3G63240.1
AT3G63240.2
AT3G63240
DNAse I-like superfamily protein
Chr2_+_3618058 0.63 AT2G08986.1
AT2G08986
hypothetical protein
Chr5_-_21439133 0.62 AT5G52882.1
AT5G52882
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_+_733887 0.62 AT5G03120.1
AT5G03120.2
AT5G03120
transmembrane protein
Chr5_+_24940203 0.62 AT5G62100.2
AT5G62100.4
AT5G62100.3
AT5G62100.5
AT5G62100.6
AT5G62100.1
BAG2
BCL-2-associated athanogene 2
Chr2_-_8730525 0.62 AT2G20240.1
TRM17
GPI-anchored adhesin-like protein, putative (DUF3741)
Chr3_-_1860797 0.61 AT3G06145.1
AT3G06145
RING zinc finger protein
Chr2_+_9089226 0.60 AT2G21220.1
AT2G21220
SAUR-like auxin-responsive protein family
Chr1_+_10010124 0.60 AT1G28470.1
NAC010
NAC domain containing protein 10
Chr4_+_9407611 0.60 AT4G16740.4
AT4G16740.3
AT4G16740.1
TPS03
terpene synthase 03
Chr3_-_22881775 0.59 AT3G61820.1
AT3G61820
Eukaryotic aspartyl protease family protein
Chr2_-_8488269 0.59 AT2G19620.2
NDL3
N-MYC downregulated-like 3
Chr4_-_17123855 0.59 AT4G36180.1
AT4G36180
Leucine-rich receptor-like protein kinase family protein
Chr1_+_23481907 0.59 AT1G63300.1
AT1G63300
Myosin heavy chain-related protein
Chr5_+_25016860 0.59 AT5G62280.1
AT5G62280
DUF1442 family protein (DUF1442)
Chr4_+_9407768 0.59 AT4G16740.2
TPS03
terpene synthase 03
Chr4_+_14087556 0.58 AT4G28520.1
AT4G28520.2
AT4G28520.4
AT4G28520.5
AT4G28520.3
CRU3
cruciferin 3
Chr2_-_8488963 0.55 AT2G19620.1
NDL3
N-MYC downregulated-like 3
Chr1_-_23469247 0.55 AT1G63260.4
AT1G63260.1
AT1G63260.2
AT1G63260.3
AT1G63260.5
AT1G63260.6
TET10
tetraspanin10
Chr1_+_25899196 0.55 AT1G68890.2
PHYLLO
2-oxoglutarate decarboxylase/hydro-lyase/magnesium ion-binding protein
Chr1_-_29638773 0.54 AT1G78830.1
AT1G78830
Curculin-like (mannose-binding) lectin family protein
Chr2_-_8487996 0.53 AT2G19620.3
NDL3
N-MYC downregulated-like 3
Chr1_+_18305445 0.53 AT1G49450.1
AT1G49450
Transducin/WD40 repeat-like superfamily protein
Chr4_-_12533924 0.53 AT4G24140.1
AT4G24140
alpha/beta-Hydrolases superfamily protein
Chr1_-_23286797 0.53 AT1G62870.1
AT1G62870
hypothetical protein
Chr1_+_25896854 0.53 AT1G68890.1
PHYLLO
2-oxoglutarate decarboxylase/hydro-lyase/magnesium ion-binding protein
Chr2_+_15117015 0.52 AT2G36000.2
AT2G36000.1
EMB3114
Mitochondrial transcription termination factor family protein
Chr5_+_17989793 0.52 AT5G44600.1
AT5G44600
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_+_18916014 0.51 AT3G50890.1
HB28
homeobox protein 28
Chr3_-_5561126 0.51 AT3G16380.1
PAB6
poly(A) binding protein 6
Chr2_-_17331173 0.50 AT2G41550.1
AT2G41550
Rho termination factor
Chr1_+_25554721 0.50 AT1G68180.1
AT1G68180
RING/U-box superfamily protein
Chr1_+_29373803 0.49 AT1G78090.1
AT1G78090.2
TPPB
trehalose-6-phosphate phosphatase
Chr5_+_26261136 0.49 AT5G65683.1
WAVH2
Zinc finger (C3HC4-type RING finger) family protein
Chr2_-_10934604 0.49 AT2G25680.1
MOT1
molybdate transporter 1
Chr2_-_15955752 0.48 AT2G38110.1
GPAT6
glycerol-3-phosphate acyltransferase 6
Chr2_+_10258107 0.48 AT2G24130.2
AT2G24130.1
AT2G24130
Leucine-rich receptor-like protein kinase family protein
Chr5_-_6363682 0.46 AT5G19040.2
AT5G19040.1
IPT5
isopentenyltransferase 5
Chr4_-_9047449 0.46 AT4G15960.1
AT4G15960
alpha/beta-Hydrolases superfamily protein
Chr1_+_5073031 0.46 AT1G14730.1
AT1G14730
Cytochrome b561/ferric reductase transmembrane protein family
Chr5_+_513296 0.46 AT5G02400.1
PLL2
pol-like 2
Chr4_+_17349218 0.45 AT4G36830.2
AT4G36830.1
HOS3-1
GNS1/SUR4 membrane protein family
Chr1_-_27588464 0.45 AT1G73370.2
SUS6
sucrose synthase 6
Chr5_-_6363413 0.45 AT5G19040.3
IPT5
isopentenyltransferase 5
Chr3_+_22798984 0.45 AT3G61610.1
AT3G61610.2
AT3G61610
Galactose mutarotase-like superfamily protein
Chr3_-_21430398 0.45 AT3G57870.1
SCE1
sumo conjugation enzyme 1
Chr2_-_13373862 0.45 AT2G31360.1
ADS2
16:0delta9 desaturase 2
Chr2_-_13374018 0.44 AT2G31360.2
ADS2
16:0delta9 desaturase 2
Chr4_-_17815084 0.44 AT4G37890.1
AT4G37890.2
EDA40
Zinc finger (C3HC4-type RING finger) family protein
Chr1_-_27588689 0.44 AT1G73370.3
SUS6
sucrose synthase 6
Chr1_-_27588978 0.43 AT1G73370.1
SUS6
sucrose synthase 6
Chr5_-_4164794 0.42 AT5G13120.2
AT5G13120.1
Pnsl5
cyclophilin 20-2
Chr4_+_9403369 0.42 AT4G16730.2
TPS02
terpene synthase 02
Chr4_-_8453179 0.42 AT4G14740.3
AT4G14740
auxin canalization protein (DUF828)
Chr1_-_19408319 0.42 AT1G52140.1
AT1G52140
Avr9/Cf-9 rapidly elicited protein
Chr2_+_10894253 0.41 AT2G25600.1
SPIK
Shaker pollen inward K+ channel
Chr5_+_5953170 0.41 AT5G17980.1
AT5G17980
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Chr1_+_28970714 0.41 AT1G77110.1
AT1G77110.2
PIN6
Auxin efflux carrier family protein
Chr1_-_2143977 0.41 AT1G06980.1
AT1G06980
6,7-dimethyl-8-ribityllumazine synthase
Chr3_+_21732122 0.40 AT3G58770.1
AT3G58770
hypothetical protein
Chr4_-_15868650 0.40 AT4G32880.1
HB-8
homeobox-leucine zipper protein ATHB-8
Chr4_+_9402898 0.40 AT4G16730.1
TPS02
terpene synthase 02
Chr1_-_6627688 0.40 AT1G19210.1
AT1G19210
Integrase-type DNA-binding superfamily protein
Chr1_-_16851010 0.40 AT1G44446.4
CH1
Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein
Chr2_+_14133810 0.40 AT2G33350.2
AT2G33350.3
AT2G33350.1
AT2G33350
CCT motif family protein
Chr3_+_7770899 0.40 AT3G22060.1
AT3G22060
Receptor-like protein kinase-related family protein
Chr4_-_15906058 0.40 AT4G32950.2
AT4G32950.1
AT4G32950
Protein phosphatase 2C family protein
Chr1_-_16851224 0.40 AT1G44446.3
AT1G44446.2
AT1G44446.1
CH1
Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein
Chr2_+_14135050 0.39 AT2G33350.4
AT2G33350.5
AT2G33350
CCT motif family protein
Chr5_+_24844248 0.39 AT5G61850.2
AT5G61850.1
LFY
floral meristem identity control protein LEAFY (LFY)
Chr5_+_918689 0.39 AT5G03620.2
AT5G03620.1
AT5G03620
Subtilisin-like serine endopeptidase family protein
Chr2_+_528179 0.39 AT2G02100.1
LCR69
low-molecular-weight cysteine-rich 69
Chr2_+_19393584 0.39 AT2G47240.3
LACS1
AMP-dependent synthetase and ligase family protein
Chr2_+_19394106 0.38 AT2G47240.4
LACS1
AMP-dependent synthetase and ligase family protein
Chr2_+_19392744 0.38 AT2G47240.2
LACS1
AMP-dependent synthetase and ligase family protein
Chr3_+_22205931 0.38 AT3G60120.1
BGLU27
beta glucosidase 27
Chr5_+_3047011 0.38 AT5G09805.1
IDL3
inflorescence deficient in abscission (IDA)-like 3
Chr1_-_17438159 0.38 AT1G47510.4
5PTASE11
inositol polyphosphate 5-phosphatase 11
Chr1_+_18346958 0.38 AT1G49570.1
AT1G49570
Peroxidase superfamily protein
Chr1_+_10696999 0.38 AT1G30340.1
AT1G30340

Chr5_+_3133244 0.38 AT5G10020.1
AT5G10020.2
AT5G10020
Leucine-rich receptor-like protein kinase family protein
Chr2_-_1277748 0.38 AT2G04025.2
AT2G04025.1
RGF3
root meristem growth factor
Chr1_-_17438357 0.38 AT1G47510.2
AT1G47510.3
AT1G47510.1
5PTASE11
inositol polyphosphate 5-phosphatase 11
Chr5_+_1327093 0.37 AT5G04620.2
AT5G04620.1
AT5G04620.3
BIOF
biotin F
Chr5_-_6480729 0.37 AT5G19260.1
FAF3
FANTASTIC four-like protein (DUF3049)
Chr3_+_2003393 0.37 AT3G06490.1
MYB108
myb domain protein 108
Chr2_+_19392497 0.37 AT2G47240.1
LACS1
AMP-dependent synthetase and ligase family protein
Chr2_-_12902815 0.37 AT2G30240.1
ATCHX13
Cation/hydrogen exchanger family protein
Chr1_+_5381032 0.36 AT1G15660.1
CENP-C
centromere protein C
Chr4_+_7357156 0.36 AT4G12423.1
AT4G12423

Chr1_+_28746833 0.36 AT1G76600.1
AT1G76600
poly polymerase
Chr5_-_23304095 0.36 AT5G57540.1
XTH13
xyloglucan endotransglucosylase/hydrolase 13
Chr3_+_21842964 0.36 AT3G59100.1
GSL11
glucan synthase-like 11
Chr1_+_19879405 0.36 AT1G53300.1
TTL1
tetratricopetide-repeat thioredoxin-like 1
Chr3_-_104495 0.36 AT3G01311.2
AT3G01311
actin cross-linking protein, putative (DUF569)
Chr5_+_1405181 0.36 AT5G04840.2
AT5G04840.1
AT5G04840
bZIP protein
Chr2_+_8677960 0.35 AT2G20100.2
AT2G20100.3
AT2G20100.1
AT2G20100.4
AT2G20100
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr3_-_21507739 0.35 AT3G58070.1
GIS
C2H2 and C2HC zinc fingers superfamily protein
Chr4_-_8454144 0.35 AT4G14740.4
AT4G14740.2
AT4G14740.1
AT4G14740
auxin canalization protein (DUF828)
Chr1_-_3623806 0.35 AT1G10870.1
AT1G10870.2
AGD4
ARF-GAP domain 4
Chr3_+_19695643 0.35 AT3G53140.1
AT3G53140
O-methyltransferase family protein
Chr5_+_20925852 0.35 AT5G51520.1
AT5G51520
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr3_-_104339 0.35 AT3G01311.1
AT3G01311
actin cross-linking protein, putative (DUF569)
Chr3_+_3712360 0.35 AT3G11740.1
AT3G11740
LURP-one-like protein (DUF567)
Chr3_-_5287544 0.35 AT3G15604.1
AT3G15604
hypothetical protein
Chr3_+_766685 0.34 AT3G03290.1
AT3G03290
Adenine nucleotide alpha hydrolases-like superfamily protein
Chr3_+_9546259 0.34 AT3G26120.1
TEL1
terminal EAR1-like 1
Chr4_+_10273480 0.34 AT4G18660.1
AT4G18660
delay of germination protein
Chr5_-_19782050 0.33 AT5G48790.3
AT5G48790.1
AT5G48790.2
AT5G48790
LOW PSII ACCUMULATION protein (DUF1995)
Chr5_-_26869719 0.33 AT5G67350.1
AT5G67350
hypothetical protein
Chr3_-_12451556 0.33 AT3G30775.2
AT3G30775.1
ERD5
Methylenetetrahydrofolate reductase family protein
Chr5_-_23992908 0.33 AT5G59520.1
ZIP2
ZRT/IRT-like protein 2
Chr4_+_7765060 0.33 AT4G13345.3
AT4G13345.1
AT4G13345.4
AT4G13345.2
AT4G13345.5
MEE55
Serinc-domain containing serine and sphingolipid biosynthesis protein
Chr1_-_8275350 0.33 AT1G23320.1
TAR1
tryptophan aminotransferase related 1
Chr4_+_8770180 0.33 AT4G15360.1
CYP705A3
cytochrome P450, family 705, subfamily A, polypeptide 3
Chr5_+_17409524 0.32 AT5G43360.1
PHT1%3B3
phosphate transporter 1;3
Chr1_+_10828373 0.32 AT1G30570.1
HERK2
hercules receptor kinase 2
Chr3_+_2020164 0.32 AT3G06520.2
AT3G06520
agenet domain-containing protein
Chr1_+_10618893 0.32 AT1G30190.1
AT1G30190
cotton fiber protein
Chr4_+_7766106 0.32 AT4G13345.6
AT4G13345.7
MEE55
Serinc-domain containing serine and sphingolipid biosynthesis protein
Chr1_-_13365172 0.32 AT1G35910.1
TPPD
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr1_-_11629573 0.32 AT1G32240.3
KAN2
Homeodomain-like superfamily protein
Chr4_+_631136 0.32 AT4G01490.1
AT4G01490

Chr2_+_16200944 0.31 AT2G38760.1
ANNAT3
annexin 3
Chr2_+_6018558 0.31 AT2G14210.2
AT2G14210.1
AGL44
AGAMOUS-like 44
Chr4_+_12876822 0.31 AT4G25080.6
AT4G25080.5
AT4G25080.2
AT4G25080.1
AT4G25080.3
AT4G25080.4
CHLM
magnesium-protoporphyrin IX methyltransferase
Chr3_-_2569700 0.31 AT3G08040.2
AT3G08040.1
FRD3
MATE efflux family protein
Chr1_-_20703460 0.31 AT1G55440.1
AT1G55440
Cysteine/Histidine-rich C1 domain family protein
Chr4_-_13204049 0.30 AT4G26020.3
AT4G26020.1
AT4G26020.2
AT4G26020
4/1 protein short form protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G50670

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.1 GO:0009233 menaquinone metabolic process(GO:0009233) menaquinone biosynthetic process(GO:0009234)
0.3 1.1 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.2 1.3 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.2 0.5 GO:0034625 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.1 0.4 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.1 1.0 GO:0090059 protoxylem development(GO:0090059)
0.1 1.6 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.1 1.5 GO:0044030 regulation of DNA methylation(GO:0044030)
0.1 3.1 GO:0010143 cutin biosynthetic process(GO:0010143)
0.1 0.4 GO:0009102 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.1 0.4 GO:0051316 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation(GO:0051316) attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation(GO:0051455) microtubule cytoskeleton organization involved in homologous chromosome segregation(GO:0090172)
0.1 1.6 GO:0009750 response to fructose(GO:0009750)
0.1 1.5 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.1 1.1 GO:0052126 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.1 2.1 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.1 1.3 GO:0006949 syncytium formation(GO:0006949)
0.1 0.5 GO:0015689 molybdate ion transport(GO:0015689)
0.1 0.4 GO:0010067 procambium histogenesis(GO:0010067)
0.1 0.2 GO:0071763 nuclear membrane organization(GO:0071763)
0.1 0.9 GO:0006265 resolution of meiotic recombination intermediates(GO:0000712) DNA topological change(GO:0006265)
0.1 1.2 GO:0080027 response to herbivore(GO:0080027)
0.1 1.7 GO:0046856 phosphatidylinositol dephosphorylation(GO:0046856)
0.1 0.4 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.1 0.2 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.1 0.7 GO:0048572 short-day photoperiodism(GO:0048572) short-day photoperiodism, flowering(GO:0048575)
0.1 0.9 GO:0006075 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.1 0.3 GO:0043406 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.0 0.1 GO:0009143 nucleoside triphosphate catabolic process(GO:0009143)
0.0 1.2 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.0 0.3 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571) positive regulation of histone H3-K27 methylation(GO:0061087)
0.0 1.0 GO:0010152 pollen maturation(GO:0010152)
0.0 0.3 GO:1904961 quiescent center organization(GO:1904961)
0.0 0.3 GO:0048830 adventitious root development(GO:0048830)
0.0 0.4 GO:0016925 protein sumoylation(GO:0016925)
0.0 0.7 GO:1902074 response to salt(GO:1902074)
0.0 0.3 GO:0010158 abaxial cell fate specification(GO:0010158)
0.0 0.5 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.0 3.2 GO:0045490 pectin catabolic process(GO:0045490)
0.0 0.3 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.0 0.3 GO:0071423 malate transmembrane transport(GO:0071423)
0.0 0.2 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.0 0.2 GO:0071249 cellular response to nitrate(GO:0071249)
0.0 0.9 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 0.1 GO:0051099 CENP-A containing nucleosome assembly(GO:0034080) positive regulation of binding(GO:0051099) regulation of DNA binding(GO:0051101) CENP-A containing chromatin organization(GO:0061641)
0.0 0.2 GO:1901404 regulation of chlorophyll catabolic process(GO:0010271) regulation of tetrapyrrole catabolic process(GO:1901404)
0.0 0.6 GO:0050821 protein stabilization(GO:0050821)
0.0 0.2 GO:0090057 root radial pattern formation(GO:0090057)
0.0 0.6 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.0 0.3 GO:0006560 proline metabolic process(GO:0006560)
0.0 0.3 GO:0015743 malate transport(GO:0015743)
0.0 1.7 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.3 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.0 0.1 GO:0051202 phytochromobilin biosynthetic process(GO:0010024) phytochromobilin metabolic process(GO:0051202)
0.0 0.1 GO:0048451 petal formation(GO:0048451)
0.0 0.5 GO:0048826 cotyledon morphogenesis(GO:0048826)
0.0 0.4 GO:0010227 floral organ abscission(GO:0010227)
0.0 0.3 GO:0048766 root hair initiation(GO:0048766)
0.0 0.6 GO:0009943 adaxial/abaxial axis specification(GO:0009943)
0.0 0.1 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.0 0.6 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.0 0.2 GO:0031222 arabinan catabolic process(GO:0031222)
0.0 0.1 GO:0043100 pyrimidine nucleobase salvage(GO:0043100)
0.0 0.3 GO:0045839 negative regulation of mitotic nuclear division(GO:0045839)
0.0 1.7 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.0 0.2 GO:0009901 anther dehiscence(GO:0009901) stamen filament development(GO:0080086)
0.0 0.4 GO:0008284 positive regulation of cell proliferation(GO:0008284)
0.0 0.2 GO:0018126 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.1 GO:0009643 photosynthetic acclimation(GO:0009643)
0.0 0.2 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.0 0.1 GO:0009823 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.0 0.1 GO:0051782 negative regulation of cell division(GO:0051782)
0.0 0.2 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.0 0.4 GO:0010091 trichome branching(GO:0010091)
0.0 0.1 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.0 0.2 GO:0070475 rRNA base methylation(GO:0070475)
0.0 0.1 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.0 0.4 GO:0009959 negative gravitropism(GO:0009959)
0.0 0.1 GO:0034497 protein localization to pre-autophagosomal structure(GO:0034497)
0.0 0.1 GO:0090356 negative regulation of auxin metabolic process(GO:0090356)
0.0 0.3 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.0 0.2 GO:0010540 basipetal auxin transport(GO:0010540)
0.0 0.2 GO:0006026 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.0 0.8 GO:0048278 vesicle docking(GO:0048278)
0.0 0.6 GO:0016145 S-glycoside catabolic process(GO:0016145) glycosinolate catabolic process(GO:0019759) glucosinolate catabolic process(GO:0019762)
0.0 0.3 GO:0008285 negative regulation of cell proliferation(GO:0008285)
0.0 0.5 GO:0010075 regulation of meristem growth(GO:0010075)
0.0 0.1 GO:0010086 nucleotide-excision repair, DNA gap filling(GO:0006297) embryonic root morphogenesis(GO:0010086)
0.0 0.1 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.9 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.2 0.8 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.1 0.7 GO:0045298 tubulin complex(GO:0045298)
0.1 0.9 GO:0009531 secondary cell wall(GO:0009531)
0.1 0.4 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.1 0.4 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778)
0.0 0.1 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.0 0.9 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 0.7 GO:0009508 plastid chromosome(GO:0009508)
0.0 0.3 GO:0005677 chromatin silencing complex(GO:0005677)
0.0 0.1 GO:0031021 interphase microtubule organizing center(GO:0031021)
0.0 4.4 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.3 GO:0009986 cell surface(GO:0009986)
0.0 1.2 GO:0005770 late endosome(GO:0005770)
0.0 4.7 GO:0005618 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 4.9 GO:0048046 apoplast(GO:0048046)
0.0 0.2 GO:0048500 signal recognition particle(GO:0048500)
0.0 0.8 GO:0009706 chloroplast inner membrane(GO:0009706)
0.0 0.5 GO:0031201 SNARE complex(GO:0031201)
0.0 0.2 GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain(GO:0033178)
0.0 0.2 GO:0034399 nuclear periphery(GO:0034399)
0.0 0.1 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.0 0.1 GO:0034045 pre-autophagosomal structure membrane(GO:0034045)
0.0 0.2 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.0 0.1 GO:0017119 Golgi transport complex(GO:0017119)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.0 GO:0052578 alpha-farnesene synthase activity(GO:0052578)
0.3 1.5 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.3 1.1 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.2 1.0 GO:0052594 tryptamine:oxygen oxidoreductase (deaminating) activity(GO:0052593) aminoacetone:oxygen oxidoreductase(deaminating) activity(GO:0052594) aliphatic-amine oxidase activity(GO:0052595) phenethylamine:oxygen oxidoreductase (deaminating) activity(GO:0052596)
0.2 0.7 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.2 1.9 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.2 1.6 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.2 0.8 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.1 0.6 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.1 0.4 GO:0019789 SUMO transferase activity(GO:0019789)
0.1 0.7 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.1 1.1 GO:0030976 transferase activity, transferring aldehyde or ketonic groups(GO:0016744) thiamine pyrophosphate binding(GO:0030976)
0.1 2.9 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.1 0.5 GO:0009922 fatty acid elongase activity(GO:0009922)
0.1 1.7 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.1 0.5 GO:0015116 sulfate transmembrane transporter activity(GO:0015116)
0.1 0.3 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.1 0.9 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.1 1.3 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.5 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 1.4 GO:0102336 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.1 1.4 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.2 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.1 0.6 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.0 1.7 GO:0005179 hormone activity(GO:0005179)
0.0 0.4 GO:0008083 growth factor activity(GO:0008083)
0.0 0.9 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 0.2 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.0 0.4 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.0 0.2 GO:0070042 rRNA (uridine) methyltransferase activity(GO:0016436) rRNA (uridine-N3-)-methyltransferase activity(GO:0070042)
0.0 0.4 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.0 1.2 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.0 0.1 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.0 0.5 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.0 0.4 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.0 1.1 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.0 1.3 GO:0016881 acid-amino acid ligase activity(GO:0016881)
0.0 0.9 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 0.3 GO:0015140 malate transmembrane transporter activity(GO:0015140)
0.0 0.1 GO:0050284 sinapate 1-glucosyltransferase activity(GO:0050284)
0.0 0.8 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 0.2 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.0 0.3 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 0.9 GO:0005249 voltage-gated potassium channel activity(GO:0005249)
0.0 0.4 GO:0016018 cyclosporin A binding(GO:0016018)
0.0 0.2 GO:0009884 cytokinin receptor activity(GO:0009884)
0.0 0.5 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.0 0.6 GO:0016168 chlorophyll binding(GO:0016168)
0.0 0.2 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.0 0.1 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.0 0.7 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.4 GO:0046961 proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.0 0.1 GO:0008131 primary amine oxidase activity(GO:0008131)
0.0 0.1 GO:0051117 ATPase binding(GO:0051117)
0.0 0.3 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.0 2.1 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.3 GO:0004499 N,N-dimethylaniline monooxygenase activity(GO:0004499)
0.0 1.1 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.2 GO:0008061 chitin binding(GO:0008061)
0.0 0.2 GO:0019798 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798) peptidyl-proline dioxygenase activity(GO:0031543) peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.0 0.6 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.1 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.0 0.2 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.0 0.1 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.0 0.2 GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor(GO:0016682)
0.0 0.1 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.0 0.1 GO:0004069 L-aspartate:2-oxoglutarate aminotransferase activity(GO:0004069) 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.0 0.3 GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors(GO:0016645)
0.0 0.2 GO:0046556 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.0 0.5 GO:0008171 O-methyltransferase activity(GO:0008171)
0.0 0.1 GO:0010011 auxin binding(GO:0010011)
0.0 0.4 GO:0031490 chromatin DNA binding(GO:0031490)
0.0 0.1 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.0 0.1 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.0 0.0 GO:0000225 N-acetylglucosaminylphosphatidylinositol deacetylase activity(GO:0000225)
0.0 0.1 GO:0080025 phosphatidylinositol-3,5-bisphosphate binding(GO:0080025)
0.0 0.0 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.0 0.7 GO:0000149 SNARE binding(GO:0000149)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.0 0.1 ST FAS SIGNALING PATHWAY Fas Signaling Pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.6 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.1 0.5 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.0 0.2 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.0 0.1 REACTOME METABOLISM OF CARBOHYDRATES Genes involved in Metabolism of carbohydrates