ISMARA results: AT5G48150

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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G48150

Z-value: 0.09

Transcription factors associated with AT5G48150

Gene Symbol	Gene ID	Gene Info
AT5G48150 TAIR	AT5G48150	GRAS family transcription factor

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
PAT1	arTal_v1_Chr5_-_19524698_19524788	-0.57	1.6e-03	Click!

Activity profile of AT5G48150 motif

Sorted Z-values of AT5G48150 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
arTal_v1_Chr5_-_19838235_19838235 Show fit	0.21	AT5G48930.1	HCT TAIR Show fit	hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
arTal_v1_Chr1_-_19161552_19161552 Show fit	0.11	AT1G51680.3 AT1G51680.2	4CL1 TAIR Show fit	4-coumarate:CoA ligase 1
arTal_v1_Chr1_-_19161737_19161737 Show fit	0.11	AT1G51680.1	4CL1 TAIR Show fit	4-coumarate:CoA ligase 1

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Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G48150

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0009963	positive regulation of flavonoid biosynthetic process(GO:0009963)

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Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.2	GO:0050734	hydroxycinnamoyltransferase activity(GO:0050734)
0.0	0.2	GO:0016207	4-coumarate-CoA ligase activity(GO:0016207)

Showing 1 to 2 of 2 entries