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GSE43616: Time-course of wild-type Arabidopsis leaf
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Results for AT5G48150
Z-value: 0.09
Transcription factors associated with AT5G48150
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
AT5G48150
|
AT5G48150 | GRAS family transcription factor |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| PAT1 | arTal_v1_Chr5_-_19524698_19524788 | -0.57 | 1.6e-03 | Click! |
Activity profile of AT5G48150 motif
Sorted Z-values of AT5G48150 motif
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| Chr5_-_19838235 | 0.21 |
AT5G48930.1
|
HCT
|
hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase |
| Chr1_-_19161552 | 0.11 |
AT1G51680.3
AT1G51680.2 |
4CL1
|
4-coumarate:CoA ligase 1 |
| Chr1_-_19161737 | 0.11 |
AT1G51680.1
|
4CL1
|
4-coumarate:CoA ligase 1 |
Network of associatons between targets according to the STRING database.
First level regulatory network of AT5G48150
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.2 | GO:0009963 | positive regulation of flavonoid biosynthetic process(GO:0009963) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 0.2 | GO:0050734 | hydroxycinnamoyltransferase activity(GO:0050734) |
| 0.0 | 0.2 | GO:0016207 | 4-coumarate-CoA ligase activity(GO:0016207) |