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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G47220

Z-value: 0.74

Transcription factors associated with AT5G47220

Gene Symbol Gene ID Gene Info
AT5G47220
AT5G47220 ethylene responsive element binding factor 2

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
ERF2arTal_v1_Chr5_-_19172956_191729560.802.5e-07Click!

Activity profile of AT5G47220 motif

Sorted Z-values of AT5G47220 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_+_18634546 3.66 AT3G50260.1
CEJ1
cooperatively regulated by ethylene and jasmonate 1
Chr1_+_6100964 3.24 AT1G17745.1
AT1G17745.2
PGDH
D-3-phosphoglycerate dehydrogenase
Chr1_-_5645443 3.24 AT1G16510.1
AT1G16510
SAUR-like auxin-responsive protein family
Chr1_+_1469541 3.14 AT1G05100.1
MAPKKK18
mitogen-activated protein kinase kinase kinase 18
Chr4_+_17440177 2.96 AT4G36990.1
HSF4
heat shock factor 4
Chr1_-_17706460 2.90 AT1G48000.1
MYB112
myb domain protein 112
Chr3_-_1776840 2.88 AT3G05937.1
AT3G05937
hypothetical protein
Chr2_-_8850111 2.78 AT2G20560.1
AT2G20560
DNAJ heat shock family protein
Chr4_+_7239200 2.77 AT4G12080.1
AHL1
AT-hook motif nuclear-localized protein 1
Chr1_-_23019494 2.75 AT1G62300.1
WRKY6
WRKY family transcription factor
Chr1_-_17266724 2.61 AT1G46768.3
AT1G46768.2
AT1G46768.1
RAP2.1
related to AP2 1
Chr4_+_18530318 2.59 AT4G39955.1
AT4G39955
alpha/beta-Hydrolases superfamily protein
Chr5_-_26096114 2.52 AT5G65300.1
AT5G65300
hypothetical protein
Chr1_+_20876440 2.50 AT1G55850.1
CSLE1
cellulose synthase like E1
Chr1_-_24362054 2.47 AT1G65520.1
ECI1
delta(3), delta(2)-enoyl CoA isomerase 1
Chr5_+_20891163 2.44 AT5G51440.1
AT5G51440
HSP20-like chaperones superfamily protein
Chr4_-_15507176 2.41 AT4G32070.2
AT4G32070.1
Phox4
Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
Chr3_+_16383595 2.34 AT3G44880.1
ACD1
Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein
Chr1_+_5090809 2.29 AT1G14780.1
AT1G14780
MAC/Perforin domain-containing protein
Chr1_+_5204312 2.28 AT1G15125.1
AT1G15125.2
AT1G15125
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_-_315405 2.26 AT5G01820.1
SR1
serine/threonine protein kinase 1
Chr5_-_2529421 2.22 AT5G07920.1
AT5G07920.3
AT5G07920.2
DGK1
diacylglycerol kinase1
Chr3_-_18373147 2.22 AT3G49570.1
LSU3
response to low sulfur 3
Chr3_+_4049309 2.21 AT3G12740.1
ALIS1
ALA-interacting subunit 1
Chr5_-_24317935 2.16 AT5G60460.2
AT5G60460
Preprotein translocase Sec, Sec61-beta subunit protein
Chr5_-_24318241 2.12 AT5G60460.1
AT5G60460
Preprotein translocase Sec, Sec61-beta subunit protein
Chr5_-_25764420 2.12 AT5G64430.1
AT5G64430
Octicosapeptide/Phox/Bem1p family protein
Chr1_+_5638779 2.07 AT1G16500.1
AT1G16500
filamentous hemagglutinin transporter
Chr5_-_7826611 2.02 AT5G23230.1
NIC2
nicotinamidase 2
Chr3_+_6536534 2.02 AT3G18950.1
AT3G18950
Transducin/WD40 repeat-like superfamily protein
Chr4_+_13847549 2.01 AT4G27780.2
AT4G27780.1
ACBP2
acyl-CoA binding protein 2
Chr2_-_13862614 2.00 AT2G32680.1
RLP23
receptor like protein 23
Chr1_-_2152541 1.98 AT1G07000.1
EXO70B2
exocyst subunit exo70 family protein B2
Chr3_+_21384146 1.97 AT3G57690.1
AGP23
arabinogalactan protein 23
Chr5_+_22779614 1.97 AT5G56270.1
WRKY2
WRKY DNA-binding protein 2
Chr4_-_12890261 1.95 AT4G25110.2
AT4G25110.1
MC2
metacaspase 2
Chr5_+_25692425 1.93 AT5G64230.1
AT5G64230
1,8-cineole synthase
Chr2_-_9266393 1.91 AT2G21660.2
GRP7
cold, circadian rhythm, and rna binding 2
Chr3_+_7906521 1.89 AT3G22370.1
AOX1A
alternative oxidase 1A
Chr5_-_23725585 1.89 AT5G58730.1
Mik
pfkB-like carbohydrate kinase family protein
Chr2_-_9266557 1.89 AT2G21660.1
GRP7
cold, circadian rhythm, and rna binding 2
Chr2_-_8447355 1.88 AT2G19500.1
CKX2
cytokinin oxidase 2
Chr2_+_15592552 1.88 AT2G37110.1
AT2G37110
PLAC8 family protein
Chr1_+_8549191 1.88 AT1G24150.2
AT1G24150.1
FH4
formin homologue 4
Chr1_-_19690589 1.87 AT1G52880.1
NAM
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr4_-_9421857 1.86 AT4G16750.1
AT4G16750
Integrase-type DNA-binding superfamily protein
Chr1_-_25445357 1.82 AT1G67860.1
AT1G67860
transmembrane protein
Chr5_+_6424779 1.82 AT5G19140.3
AILP1
aluminum induced protein with YGL and LRDR motifs
Chr4_+_12909463 1.81 AT4G25170.1
AT4G25170.2
AT4G25170
Uncharacterized conserved protein (UCP012943)
Chr2_-_11685342 1.77 AT2G27310.1
AT2G27310
F-box family protein
Chr1_-_10635581 1.76 AT1G30220.1
INT2
inositol transporter 2
Chr3_+_590425 1.73 AT3G02740.1
AT3G02740.2
AT3G02740
Eukaryotic aspartyl protease family protein
Chr5_+_16281394 1.73 AT5G40650.1
AT5G40650.2
SDH2-2
succinate dehydrogenase 2-2
Chr5_+_6423153 1.72 AT5G19140.2
AT5G19140.1
AILP1
aluminum induced protein with YGL and LRDR motifs
Chr1_+_11181504 1.66 AT1G31280.1
AGO2
Argonaute family protein
Chr1_+_28163344 1.66 AT1G75000.1
AT1G75000
GNS1/SUR4 membrane protein family
Chr1_+_1882907 1.65 AT1G06160.1
ORA59
octadecanoid-responsive AP2/ERF 59
Chr1_+_27397089 1.64 AT1G72800.1
AT1G72800
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr1_-_575085 1.63 AT1G02660.1
AT1G02660
alpha/beta-Hydrolases superfamily protein
Chr5_-_2458502 1.61 AT5G07730.1
AT5G07730
transmembrane protein
Chr5_-_7636576 1.61 AT5G22850.1
AT5G22850
Eukaryotic aspartyl protease family protein
Chr4_+_1887462 1.60 AT4G03960.1
PFA-DSP4
Phosphotyrosine protein phosphatases superfamily protein
Chr4_+_17307709 1.54 AT4G36720.1
HVA22K
HVA22-like protein K
Chr1_+_23527570 1.50 AT1G63440.1
HMA5
heavy metal atpase 5
Chr1_+_10214681 1.50 AT1G29230.1
CIPK18
CBL-interacting protein kinase 18
Chr1_+_26830603 1.50 AT1G71170.1
AT1G71170
6-phosphogluconate dehydrogenase family protein
Chr1_+_27784928 1.49 AT1G73880.1
UGT89B1
UDP-glucosyl transferase 89B1
Chr5_-_17696690 1.48 AT5G43980.1
PDLP1
plasmodesmata-located protein 1
Chr2_-_18847835 1.48 AT2G45760.1
BAP2
BON association protein 2
Chr5_-_20506354 1.47 AT5G50360.1
AT5G50360
von willebrand factor A domain protein
Chr1_+_28070295 1.46 AT1G74710.1
AT1G74710.2
EDS16
ADC synthase superfamily protein
Chr2_-_9706217 1.43 AT2G22800.1
HAT9
Homeobox-leucine zipper protein family
Chr2_-_17422747 1.43 AT2G41750.1
AT2G41750
DTW domain-containing protein
Chr5_-_4474530 1.43 AT5G13860.1
ELC-Like
ELCH-like protein
Chr5_+_866339 1.41 AT5G03470.1
ATB' ALPHA
Protein phosphatase 2A regulatory B subunit family protein
Chr5_+_3509833 1.41 AT5G11060.1
KNAT4
homeobox protein knotted-1-like 4
Chr1_-_27088248 1.35 AT1G71960.1
ABCG25
ATP-binding casette family G25
Chr4_+_12431097 1.34 AT4G23920.1
UGE2
UDP-D-glucose/UDP-D-galactose 4-epimerase 2
Chr3_+_6820926 1.33 AT3G19640.1
MGT4
magnesium transporter 4
Chr4_+_17938372 1.33 AT4G38270.1
AT4G38270.2
GAUT3
galacturonosyltransferase 3
Chr4_+_14409772 1.32 AT4G29230.1
AT4G29230.2
AT4G29230.3
NAC075
NAC domain containing protein 75
Chr2_+_114926 1.32 AT2G01190.1
PDE331
Octicosapeptide/Phox/Bem1p family protein
Chr1_+_12004854 1.31 AT1G33110.1
AT1G33110.2
AT1G33110
MATE efflux family protein
Chr4_+_16997091 1.31 AT4G35890.2
AT4G35890.1
LARP1c
winged-helix DNA-binding transcription factor family protein
Chr5_+_4756057 1.30 AT5G14730.1
AT5G14730
hypothetical protein
Chr1_-_16137463 1.30 AT1G42990.1
BZIP60
basic region/leucine zipper motif 60
Chr2_+_7564240 1.29 AT2G17420.1
AT2G17420.2
NTRA
NADPH-dependent thioredoxin reductase A
Chr2_-_10988924 1.25 AT2G25760.2
AT2G25760
Protein kinase family protein
Chr4_+_9759203 1.24 AT4G17500.1
ERF-1
ethylene responsive element binding factor 1
Chr5_+_7946285 1.24 AT5G23575.1
AT5G23575
Transmembrane CLPTM1 family protein
Chr2_-_9527845 1.24 AT2G22430.1
HB6
homeobox protein 6
Chr2_-_10989117 1.23 AT2G25760.1
AT2G25760
Protein kinase family protein
Chr1_-_25446952 1.21 AT1G67865.1
AT1G67865
hypothetical protein
Chr2_-_11777529 1.21 AT2G27580.2
AT2G27580.1
AT2G27580
A20/AN1-like zinc finger family protein
Chr1_-_25447622 1.20 AT1G67865.2
AT1G67865
hypothetical protein
Chr1_+_278600 1.20 AT1G01770.1
AT1G01770
propionyl-CoA carboxylase
Chr4_+_9028262 1.19 AT4G15910.1
DI21
drought-induced 21
Chr4_+_578028 1.19 AT4G01410.1
AT4G01410
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr2_+_15192480 1.18 AT2G36220.1
AT2G36220
hypothetical protein
Chr4_+_1042235 1.17 AT4G02370.1
AT4G02370
pectinesterase (Protein of unknown function, DUF538)
Chr3_-_7445303 1.16 AT3G21215.2
AT3G21215.3
AT3G21215.4
AT3G21215.1
AT3G21215
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr1_+_17432433 1.16 AT1G47500.1
AT1G47500.2
RBP47C'
RNA-binding protein 47C'
Chr1_+_29502506 1.16 AT1G78410.1
AT1G78410.2
AT1G78410
VQ motif-containing protein
Chr2_+_19629474 1.15 AT2G47970.2
AT2G47970
Nuclear pore localization protein NPL4
Chr2_+_19629217 1.15 AT2G47970.1
AT2G47970
Nuclear pore localization protein NPL4
Chr3_-_23200723 1.14 AT3G62710.1
AT3G62710
Glycosyl hydrolase family protein
Chr1_-_30004083 1.13 AT1G79730.1
ELF7
hydroxyproline-rich glycoprotein family protein
Chr2_-_9767 1.12 AT2G01023.1
AT2G01023
hypothetical protein
Chr4_+_9891051 1.12 AT4G17790.1
AT4G17790
SNARE associated Golgi protein family
Chr5_+_6369004 1.11 AT5G19050.1
AT5G19050
alpha/beta-Hydrolases superfamily protein
Chr2_-_17065813 1.10 AT2G40900.1
UMAMIT11
nodulin MtN21 /EamA-like transporter family protein
Chr1_-_12516521 1.09 AT1G34315.1
AT1G34315
transmembrane protein
Chr3_+_2819040 1.08 AT3G09180.2
AT3G09180.1
AT3G09180.3
AT3G09180
mediator of RNA polymerase II transcription subunit
Chr2_+_1025 1.07 AT2G01008.1
AT2G01008
maternal effect embryo arrest protein
Chr1_+_22409298 1.06 AT1G60870.1
MEE9
maternal effect embryo arrest 9
Chr2_-_7446099 1.05 AT2G17110.1
AT2G17110
DNA-directed RNA polymerase subunit beta, putative (DUF630 and DUF632)
Chr1_-_29879204 1.05 AT1G79430.1
AT1G79430.2
APL
Homeodomain-like superfamily protein
Chr1_-_18184583 1.03 AT1G49170.1
AT1G49170
hypothetical protein
Chr3_-_5892216 1.01 AT3G17240.2
AT3G17240.3
AT3G17240.1
mtLPD2
lipoamide dehydrogenase 2
Chr1_+_24028830 1.00 AT1G64660.1
MGL
methionine gamma-lyase
Chr3_-_4671796 0.99 AT3G14090.1
EXO70D3
exocyst subunit exo70 family protein D3
Chr3_+_270221 0.98 AT3G01750.1
AT3G01750.2
AT3G01750
Ankyrin repeat family protein
Chr2_-_13835758 0.96 AT2G32600.1
AT2G32600
hydroxyproline-rich glycoprotein family protein
Chr5_-_6730395 0.96 AT5G19900.1
AT5G19900.2
AT5G19900.5
AT5G19900.4
AT5G19900.3
AT5G19900
PRLI-interacting factor
Chr3_+_10782095 0.95 AT3G28720.2
AT3G28720.1
AT3G28720
transmembrane protein
Chr1_+_2649459 0.94 AT1G08420.1
AT1G08420.2
BSL2
BRI1 suppressor 1 (BSU1)-like 2
Chr5_+_652048 0.91 AT5G02850.1
AT5G02850
hydroxyproline-rich glycoprotein family protein
Chr3_-_10132759 0.91 AT3G27380.2
AT3G27380.1
SDH2-1
succinate dehydrogenase 2-1
Chr1_+_27026677 0.91 AT1G71860.1
AT1G71860.3
AT1G71860.2
PTP1
protein tyrosine phosphatase 1
Chr2_+_216605 0.91 AT2G01480.1
AT2G01480.2
AT2G01480
O-fucosyltransferase family protein
Chr2_+_3618058 0.90 AT2G08986.1
AT2G08986
hypothetical protein
Chr1_-_182497 0.90 AT1G01490.4
AT1G01490.3
AT1G01490
Heavy metal transport/detoxification superfamily protein
Chr1_-_182749 0.90 AT1G01490.2
AT1G01490.1
AT1G01490
Heavy metal transport/detoxification superfamily protein
Chr5_+_17451488 0.88 AT5G43420.1
AT5G43420
RING/U-box superfamily protein
Chr3_+_4525033 0.88 AT3G13780.1
AT3G13780
SMAD/FHA domain-containing protein
Chr4_-_8305857 0.88 AT4G14430.1
IBR10
indole-3-butyric acid response 10
Chr3_+_1936050 0.86 AT3G06380.2
AT3G06380.1
TLP9
tubby-like protein 9
Chr2_-_17613591 0.86 AT2G42280.2
AT2G42280.3
AT2G42280.1
FBH4
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr1_-_2467058 0.86 AT1G07950.1
AT1G07950.2
MED22B
Surfeit locus protein 5 subunit 22 of Mediator complex
Chr2_-_18821889 0.85 AT2G45680.1
TCP9
TCP family transcription factor
Chr5_-_37999 0.85 AT5G01100.1
FRB1
O-fucosyltransferase family protein
Chr3_-_5618322 0.84 AT3G16510.1
AT3G16510
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr2_+_6797111 0.84 AT2G15580.3
AT2G15580.1
AT2G15580
RING/U-box superfamily protein
Chr4_-_13016235 0.83 AT4G25470.1
CBF2
C-repeat/DRE binding factor 2
Chr1_+_26814260 0.83 AT1G71100.1
RSW10
Ribose 5-phosphate isomerase, type A protein
Chr4_-_8369312 0.83 AT4G14580.1
CIPK4
CBL-interacting protein kinase 4
Chr2_+_6797335 0.82 AT2G15580.2
AT2G15580
RING/U-box superfamily protein
Chr3_-_23301865 0.80 AT3G63060.1
EDL3
EID1-like 3
Chr4_-_13769961 0.80 AT4G27585.1
AT4G27585
SPFH/Band 7/PHB domain-containing membrane-associated protein family
Chr4_+_12872379 0.80 AT4G25070.2
AT4G25070.1
AT4G25070
caldesmon-like protein
Chr1_-_1399053 0.79 AT1G04930.3
AT1G04930.2
AT1G04930.1
AT1G04930
hydroxyproline-rich glycoprotein family protein
Chr1_+_9726948 0.79 AT1G27920.2
MAP65-8
microtubule-associated protein 65-8
Chr3_+_17937047 0.78 AT3G48430.2
REF6
relative of early flowering 6
Chr4_+_274252 0.77 AT4G00660.2
AT4G00660.1
RH8
RNAhelicase-like 8
Chr3_+_17935256 0.76 AT3G48430.1
REF6
relative of early flowering 6
Chr5_-_979849 0.76 AT5G03730.1
AT5G03730.2
CTR1
Protein kinase superfamily protein
Chr2_+_19079305 0.76 AT2G46490.1
AT2G46490
hypothetical protein
Chr3_+_15405984 0.76 AT3G43520.1
AT3G43520
Transmembrane proteins 14C
Chr1_-_22723152 0.74 AT1G61580.1
RPL3B
R-protein L3 B
Chr5_+_21514896 0.74 AT5G53060.1
AT5G53060.3
AT5G53060.2
RCF3
RNA-binding KH domain-containing protein
Chr3_-_4262916 0.74 AT3G13225.2
AT3G13225.1
AT3G13225
WW domain-containing protein
Chr4_-_16853035 0.73 AT4G35480.1
RHA3B
RING-H2 finger A3B
Chr4_-_7386931 0.72 AT4G12450.1
AT4G12450
zinc finger (C2H2 type) family protein
Chr5_-_26438771 0.71 AT5G66140.1
PAD2
proteasome alpha subunit D2
Chr1_-_23855658 0.70 AT1G64280.1
NPR1
regulatory protein (NPR1)
Chr3_+_3595694 0.70 AT3G11430.1
GPAT5
glycerol-3-phosphate acyltransferase 5
Chr2_+_10024150 0.69 AT2G23540.1
AT2G23540
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr2_+_18138246 0.69 AT2G43790.1
MPK6
MAP kinase 6
Chr3_-_498887 0.68 AT3G02420.2
AT3G02420.1
AT3G02420
dihydroflavonol 4-reductase/flavanone protein
Chr4_+_9148059 0.68 AT4G16150.1
AT4G16150
calmodulin-binding transcription activator 5
Chr4_-_10491718 0.68 AT4G19185.2
AT4G19185.1
UMAMIT2
nodulin MtN21 /EamA-like transporter family protein
Chr1_-_23801720 0.67 AT1G64110.1
AT1G64110.3
AT1G64110.2
DAA1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_+_25325138 0.67 AT1G67570.1
AT1G67570.2
AT1G67570
zinc finger CONSTANS-like protein (DUF3537)
Chr1_-_9733000 0.64 AT1G27930.1
AT1G27930
glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
Chr1_+_9726655 0.64 AT1G27920.1
MAP65-8
microtubule-associated protein 65-8
Chr3_-_4262255 0.64 AT3G13225.3
AT3G13225
WW domain-containing protein
Chr5_+_9803647 0.64 AT5G27690.1
AT5G27690
Heavy metal transport/detoxification superfamily protein
Chr4_+_7042354 0.64 AT4G11660.1
AT-HSFB2B
winged-helix DNA-binding transcription factor family protein
Chr3_+_2940305 0.63 AT3G09570.1
AT3G09570
Lung seven transmembrane receptor family protein
Chr5_+_3931349 0.63 AT5G12170.2
AT5G12170.3
CLT3
CRT (chloroquine-resistance transporter)-like transporter 3
Chr2_-_18907973 0.60 AT2G45950.2
AT2G45950.1
AT2G45950.3
SK20
SKP1-like 20
Chr1_+_474373 0.60 AT1G02370.1
AT1G02370
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_+_4441858 0.60 AT5G13760.1
AT5G13760
Plasma-membrane choline transporter family protein
Chr5_-_18736815 0.59 AT5G46210.1
CUL4
cullin4
Chr2_-_16740486 0.58 AT2G40090.1
ATH9
ABC2 homolog 9
Chr5_+_395567 0.57 AT5G02030.1
RPL
POX (plant homeobox) family protein
Chr1_+_3914774 0.57 AT1G11650.1
AT1G11650.2
RBP45B
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr5_-_1918896 0.56 AT5G06280.3
AT5G06280.1
AT5G06280
hypothetical protein
Chr5_-_3065889 0.55 AT5G09850.2
AT5G09850.1
AT5G09850.3
AT5G09850.4
AT5G09850.5
AT5G09850
Transcription elongation factor (TFIIS) family protein
Chr3_+_2413623 0.55 AT3G07565.1
AT3G07565.3
AT3G07565.4
AT3G07565.2
AT3G07565
histone H2A deubiquitinase (DUF3755)
Chr5_-_5253790 0.54 AT5G16080.1
CXE17
carboxyesterase 17
Chr2_-_18907477 0.53 AT2G45950.4
AT2G45950.5
SK20
SKP1-like 20
Chr1_-_17976663 0.53 AT1G48620.1
HON5
high mobility group A5
Chr2_+_9541401 0.53 AT2G22475.2
GEM
GRAM domain family protein
Chr4_+_18315545 0.52 AT4G39390.2
AT4G39390.1
AT4G39390.3
NST-K1
nucleotide sugar transporter-KT 1
Chr5_+_20255173 0.52 AT5G49840.3
AT5G49840.2
AT5G49840.4
AT5G49840.1
AT5G49840
ATP-dependent Clp protease
Chr1_+_29665166 0.52 AT1G78910.2
AT1G78910.1
AT1G78910
Pseudouridine synthase family protein
Chr3_+_1940907 0.52 AT3G06400.2
AT3G06400.1
AT3G06400.3
CHR11
chromatin-remodeling protein 11
Chr2_+_10610833 0.52 AT2G24945.1
AT2G24945
transmembrane protein
Chr2_-_16038972 0.52 AT2G38280.2
AT2G38280.1
FAC1
AMP deaminase, putative / myoadenylate deaminase

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G47220

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 3.1 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.7 2.8 GO:0080029 cellular response to boron-containing substance levels(GO:0080029)
0.7 2.0 GO:0010288 response to lead ion(GO:0010288)
0.7 2.0 GO:0032491 detection of molecule of fungal origin(GO:0032491)
0.6 3.2 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.5 2.4 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.4 4.3 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.4 2.3 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.3 1.0 GO:0010481 epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482)
0.3 1.4 GO:0080168 abscisic acid transport(GO:0080168)
0.3 2.6 GO:0006121 mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.3 2.2 GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205)
0.3 0.8 GO:0017145 stem cell division(GO:0017145)
0.3 1.5 GO:1990169 detoxification of copper ion(GO:0010273) stress response to copper ion(GO:1990169)
0.2 1.0 GO:0019343 cysteine biosynthetic process via cystathionine(GO:0019343)
0.2 0.7 GO:0071763 nuclear membrane organization(GO:0071763)
0.2 1.9 GO:0031930 alternative respiration(GO:0010230) mitochondria-nucleus signaling pathway(GO:0031930)
0.2 1.5 GO:0060866 leaf abscission(GO:0060866)
0.2 2.0 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.2 2.0 GO:0009942 longitudinal axis specification(GO:0009942)
0.2 1.5 GO:0035067 histone H3-K9 demethylation(GO:0033169) negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.2 1.9 GO:0033517 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.2 2.2 GO:0015914 phospholipid transport(GO:0015914)
0.2 2.4 GO:0048317 seed morphogenesis(GO:0048317)
0.2 0.9 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.2 0.5 GO:0015717 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.2 0.6 GO:0034635 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.2 0.5 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.1 1.3 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.1 1.2 GO:0009061 anaerobic respiration(GO:0009061)
0.1 0.7 GO:1902065 response to L-glutamate(GO:1902065)
0.1 0.5 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.1 1.5 GO:0052192 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.1 0.4 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.1 3.3 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.1 0.3 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.1 0.5 GO:0099636 cytoplasmic streaming(GO:0099636)
0.1 1.4 GO:0009554 megasporogenesis(GO:0009554)
0.1 1.1 GO:0016584 nucleosome positioning(GO:0016584)
0.1 0.8 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.1 1.8 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.1 0.6 GO:0048439 flower morphogenesis(GO:0048439)
0.1 1.5 GO:0006574 valine catabolic process(GO:0006574)
0.1 0.3 GO:0051973 positive regulation of telomerase activity(GO:0051973)
0.1 0.3 GO:0072337 modified amino acid transport(GO:0072337)
0.1 1.8 GO:0015850 organic hydroxy compound transport(GO:0015850)
0.1 0.5 GO:0072334 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.1 1.6 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.1 2.0 GO:0019674 NAD metabolic process(GO:0019674)
0.1 2.5 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.1 1.9 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.1 0.9 GO:0022610 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.1 0.4 GO:0006571 tyrosine biosynthetic process(GO:0006571)
0.1 0.3 GO:0009188 UDP biosynthetic process(GO:0006225) ribonucleoside diphosphate biosynthetic process(GO:0009188) pyrimidine ribonucleoside diphosphate metabolic process(GO:0009193) pyrimidine ribonucleoside diphosphate biosynthetic process(GO:0009194) UDP metabolic process(GO:0046048)
0.1 0.4 GO:1901535 regulation of DNA demethylation(GO:1901535)
0.1 0.4 GO:0009726 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.1 2.0 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.1 1.3 GO:1905177 tracheary element differentiation(GO:1905177)
0.1 0.9 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.1 0.2 GO:0019720 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) molybdenum incorporation into molybdenum-molybdopterin complex(GO:0018315) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) metal incorporation into metallo-molybdopterin complex(GO:0042040) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.1 0.4 GO:0048871 multicellular organismal homeostasis(GO:0048871)
0.1 3.7 GO:0010941 regulation of cell death(GO:0010941)
0.1 2.5 GO:0006635 fatty acid beta-oxidation(GO:0006635)
0.1 0.2 GO:0055047 generative cell mitosis(GO:0055047)
0.1 0.7 GO:0031053 primary miRNA processing(GO:0031053)
0.1 0.5 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.1 1.3 GO:0030968 endoplasmic reticulum unfolded protein response(GO:0030968)
0.1 0.6 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.1 1.6 GO:1900424 regulation of defense response to bacterium(GO:1900424)
0.1 2.3 GO:0009626 plant-type hypersensitive response(GO:0009626)
0.0 0.7 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.0 0.5 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.0 0.3 GO:0009972 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.0 0.6 GO:0048572 short-day photoperiodism(GO:0048572) short-day photoperiodism, flowering(GO:0048575)
0.0 0.1 GO:0071323 cellular response to chitin(GO:0071323)
0.0 1.3 GO:0006012 galactose metabolic process(GO:0006012)
0.0 0.2 GO:0016444 somatic cell DNA recombination(GO:0016444)
0.0 0.2 GO:0000729 meiotic DNA double-strand break processing(GO:0000706) DNA double-strand break processing(GO:0000729)
0.0 1.0 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.0 0.7 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.0 0.4 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.1 GO:0048479 style development(GO:0048479) stigma development(GO:0048480)
0.0 0.5 GO:0006188 IMP biosynthetic process(GO:0006188) purine nucleotide salvage(GO:0032261) purine-containing compound salvage(GO:0043101)
0.0 1.1 GO:0009251 glucan catabolic process(GO:0009251)
0.0 2.0 GO:0009631 cold acclimation(GO:0009631)
0.0 1.1 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.0 1.1 GO:0006368 transcription elongation from RNA polymerase II promoter(GO:0006368)
0.0 0.3 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.0 1.9 GO:0034605 cellular response to heat(GO:0034605)
0.0 0.3 GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.0 0.2 GO:0010117 photoprotection(GO:0010117)
0.0 1.2 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.0 1.1 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.0 0.6 GO:0010193 response to ozone(GO:0010193)
0.0 0.4 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.0 0.2 GO:0010088 phloem development(GO:0010088)
0.0 0.7 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.8 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.4 GO:0010229 inflorescence development(GO:0010229)
0.0 0.3 GO:0015718 monocarboxylic acid transport(GO:0015718)
0.0 5.7 GO:0006357 regulation of transcription from RNA polymerase II promoter(GO:0006357)
0.0 1.1 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 0.5 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.4 GO:0031348 negative regulation of defense response(GO:0031348)
0.0 1.0 GO:0006887 exocytosis(GO:0006887)
0.0 0.1 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.0 1.2 GO:0010200 response to chitin(GO:0010200)
0.0 0.9 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 0.0 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 0.2 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.0 1.9 GO:0050832 defense response to fungus(GO:0050832)
0.0 0.5 GO:0000381 regulation of alternative mRNA splicing, via spliceosome(GO:0000381)
0.0 3.0 GO:0009414 response to water deprivation(GO:0009414)
0.0 0.6 GO:0009742 brassinosteroid mediated signaling pathway(GO:0009742) steroid hormone mediated signaling pathway(GO:0043401) response to steroid hormone(GO:0048545) cellular response to steroid hormone stimulus(GO:0071383)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 4.3 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.7 2.0 GO:0009514 glyoxysome(GO:0009514)
0.2 2.6 GO:0045273 respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281)
0.2 2.0 GO:0070062 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.2 1.4 GO:0000813 ESCRT I complex(GO:0000813)
0.2 0.5 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.1 1.1 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.1 1.3 GO:0010445 nuclear dicing body(GO:0010445)
0.1 1.1 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.1 1.9 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.1 0.8 GO:0017053 transcriptional repressor complex(GO:0017053)
0.1 1.0 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 1.3 GO:0005844 polysome(GO:0005844)
0.1 2.4 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.1 1.5 GO:0035097 histone methyltransferase complex(GO:0035097)
0.1 1.4 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.1 0.5 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.0 0.4 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.0 0.7 GO:0019773 proteasome core complex, alpha-subunit complex(GO:0019773)
0.0 0.2 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.0 2.3 GO:0009706 chloroplast inner membrane(GO:0009706)
0.0 2.6 GO:0009524 phragmoplast(GO:0009524)
0.0 1.0 GO:0000145 exocyst(GO:0000145)
0.0 0.7 GO:0034399 nuclear periphery(GO:0034399)
0.0 0.8 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 1.0 GO:0005686 U2 snRNP(GO:0005686)
0.0 0.2 GO:0001673 male germ cell nucleus(GO:0001673)
0.0 0.5 GO:0000786 nucleosome(GO:0000786)
0.0 3.6 GO:0042025 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 0.3 GO:0005662 DNA replication factor A complex(GO:0005662)
0.0 0.4 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.0 1.8 GO:0090406 pollen tube(GO:0090406)
0.0 0.6 GO:0032592 integral component of mitochondrial membrane(GO:0032592)
0.0 1.3 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 0.9 GO:0016592 mediator complex(GO:0016592)
0.0 0.3 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.0 2.2 GO:0000790 nuclear chromatin(GO:0000790)
0.0 1.9 GO:0005759 mitochondrial matrix(GO:0005759)
0.0 1.1 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.9 GO:0098687 chromosomal region(GO:0098687)
0.0 2.8 GO:0005802 trans-Golgi network(GO:0005802)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.8 3.2 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.7 2.0 GO:0008936 nicotinamidase activity(GO:0008936)
0.7 3.4 GO:0004165 dodecenoyl-CoA delta-isomerase activity(GO:0004165)
0.6 2.8 GO:0003680 AT DNA binding(GO:0003680)
0.5 2.0 GO:0032791 lead ion binding(GO:0032791)
0.5 1.5 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.5 1.5 GO:0008909 isochorismate synthase activity(GO:0008909)
0.5 2.3 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.4 4.3 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.4 2.6 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.4 1.8 GO:0005366 myo-inositol:proton symporter activity(GO:0005366)
0.3 1.7 GO:0035197 siRNA binding(GO:0035197)
0.3 2.2 GO:0004143 diacylglycerol kinase activity(GO:0004143)
0.3 1.1 GO:0048030 disaccharide binding(GO:0048030) maltose binding(GO:1901982)
0.2 1.5 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.2 1.9 GO:0009916 alternative oxidase activity(GO:0009916)
0.2 3.1 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.2 1.1 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.2 0.8 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.2 1.0 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.2 0.5 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.2 1.2 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.2 0.5 GO:0015152 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
0.1 1.0 GO:0004123 cystathionine gamma-lyase activity(GO:0004123)
0.1 1.5 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.1 0.9 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.1 2.4 GO:0008143 poly(A) binding(GO:0008143)
0.1 1.3 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.1 1.3 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.1 0.3 GO:0008517 folic acid transporter activity(GO:0008517)
0.1 1.1 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044)
0.1 0.7 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.5 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 0.4 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.1 2.5 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.1 0.3 GO:0033862 UMP kinase activity(GO:0033862)
0.1 0.5 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.1 1.1 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.1 0.5 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.1 0.5 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.1 0.8 GO:0019239 deaminase activity(GO:0019239)
0.1 1.6 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.1 6.7 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 1.1 GO:0097602 cullin family protein binding(GO:0097602)
0.0 2.7 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.0 0.3 GO:0030332 cyclin binding(GO:0030332)
0.0 1.8 GO:0019888 protein phosphatase regulator activity(GO:0019888)
0.0 0.7 GO:0031369 translation initiation factor binding(GO:0031369)
0.0 0.5 GO:0031491 nucleosome binding(GO:0031491)
0.0 0.7 GO:0019902 phosphatase binding(GO:0019902)
0.0 0.2 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.0 0.5 GO:0003725 double-stranded RNA binding(GO:0003725)
0.0 0.3 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.0 0.2 GO:0030151 molybdenum ion binding(GO:0030151)
0.0 2.0 GO:0043621 protein self-association(GO:0043621)
0.0 0.8 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.3 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.0 0.5 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 2.0 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 1.5 GO:0015662 ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism(GO:0015662)
0.0 0.1 GO:0016676 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.0 2.3 GO:0003779 actin binding(GO:0003779)
0.0 0.0 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.0 2.0 GO:0003712 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.0 2.0 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.0 0.8 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 0.8 GO:0019901 protein kinase binding(GO:0019901)
0.0 0.1 GO:0008061 chitin binding(GO:0008061)
0.0 0.2 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 5.7 GO:0000976 regulatory region DNA binding(GO:0000975) transcription regulatory region sequence-specific DNA binding(GO:0000976) regulatory region nucleic acid binding(GO:0001067) transcription regulatory region DNA binding(GO:0044212)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 PID VEGF VEGFR PATHWAY VEGF and VEGFR signaling network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 2.5 REACTOME FATTY ACID TRIACYLGLYCEROL AND KETONE BODY METABOLISM Genes involved in Fatty acid, triacylglycerol, and ketone body metabolism
0.1 0.2 REACTOME SEMAPHORIN INTERACTIONS Genes involved in Semaphorin interactions
0.1 0.5 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER