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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G46830

Z-value: 0.72

Transcription factors associated with AT5G46830

Gene Symbol Gene ID Gene Info
AT5G46830 calcium-binding transcription factor NIG1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
NIG1arTal_v1_Chr5_+_19002564_190025640.115.7e-01Click!

Activity profile of AT5G46830 motif

Sorted Z-values of AT5G46830 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_-_23238644 1.87 AT1G62760.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_+_27538190 1.61 AT1G73220.1
organic cation/carnitine transporter1
Chr5_+_1153740 1.61 AT5G04200.1
metacaspase 9
Chr4_+_9407611 1.53 AT4G16740.4
AT4G16740.3
AT4G16740.1
terpene synthase 03
Chr3_+_5471735 1.49 AT3G16150.1
N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
Chr3_-_162905 1.46 AT3G01420.1
Peroxidase superfamily protein
Chr2_-_18781973 1.42 AT2G45570.1
cytochrome P450, family 76, subfamily C, polypeptide 2
Chr1_+_10537648 1.41 AT1G30040.2
gibberellin 2-oxidase
Chr1_-_25662276 1.38 AT1G68450.1
VQ motif-containing protein
Chr1_+_10537457 1.37 AT1G30040.1
gibberellin 2-oxidase
Chr1_+_1469541 1.37 AT1G05100.1
mitogen-activated protein kinase kinase kinase 18
Chr3_+_9496102 1.36 AT3G25950.1
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Chr1_+_9825169 1.35 AT1G28130.1
Auxin-responsive GH3 family protein
Chr3_+_7581959 1.34 AT3G21520.1
transmembrane protein, putative (DUF679 domain membrane protein 1)
Chr2_+_13581534 1.33 AT2G31945.1
transmembrane protein
Chr2_-_8447355 1.33 AT2G19500.1
cytokinin oxidase 2
Chr1_+_9825914 1.33 AT1G28130.2
Auxin-responsive GH3 family protein
Chr4_+_17855637 1.27 AT4G37990.1
cinnamyl alcohol dehydrogenase 8
Chr3_+_15983199 1.26 AT3G44300.1
nitrilase 2
Chr4_+_9407768 1.25 AT4G16740.2
terpene synthase 03
Chr1_+_3066674 1.24 AT1G09500.1
AT1G09500.2
AT1G09500.3
NAD(P)-binding Rossmann-fold superfamily protein
Chr4_+_15828228 1.24 AT4G32810.1
AT4G32810.2
carotenoid cleavage dioxygenase 8
Chr4_+_10142255 1.23 AT4G18350.1
nine-cis-epoxycarotenoid dioxygenase 2
Chr5_-_20191604 1.19 AT5G49690.1
UDP-Glycosyltransferase superfamily protein
Chr5_-_4183354 1.18 AT5G13170.1
senescence-associated gene 29
Chr5_+_4488476 1.18 AT5G13930.1
Chalcone and stilbene synthase family protein
Chr2_+_18577500 1.17 AT2G45040.1
Matrixin family protein
Chr4_+_13653579 1.17 AT4G27260.1
Auxin-responsive GH3 family protein
Chr1_-_8967562 1.15 AT1G25530.1
Transmembrane amino acid transporter family protein
Chr3_-_19577141 1.15 AT3G52820.1
purple acid phosphatase 22
Chr1_-_1996355 1.15 AT1G06520.1
glycerol-3-phosphate acyltransferase 1
Chr5_-_17166032 1.15 AT5G42800.1
dihydroflavonol 4-reductase
Chr5_+_8541713 1.14 AT5G24860.3
AT5G24860.1
flowering promoting factor 1
Chr4_+_17579618 1.13 AT4G37390.1
Auxin-responsive GH3 family protein
Chr3_-_21285941 1.13 AT3G57510.1
Pectin lyase-like superfamily protein
Chr2_-_16860779 1.11 AT2G40370.1
laccase 5
Chr1_-_575085 1.10 AT1G02660.1
alpha/beta-Hydrolases superfamily protein
Chr2_-_5933929 1.09 AT2G14095.1
AT2G14095.2
hypothetical protein
Chr3_-_387051 1.08 AT3G02140.1
AFP2 (ABI five-binding protein 2) family protein
Chr1_+_27462983 1.08 AT1G73000.1
PYR1-like 3
Chr2_+_15514923 1.08 AT2G36950.1
Heavy metal transport/detoxification superfamily protein
Chr2_-_14146471 1.05 AT2G33380.2
AT2G33380.1
Caleosin-related family protein
Chr2_-_16780368 1.04 AT2G40170.1
Stress induced protein
Chr3_+_5234457 1.04 AT3G15500.1
NAC domain containing protein 3
Chr2_-_15014147 1.03 AT2G35710.3
AT2G35710.4
AT2G35710.1
Nucleotide-diphospho-sugar transferases superfamily protein
Chr5_+_23192872 1.02 AT5G57240.3
AT5G57240.5
AT5G57240.4
AT5G57240.1
OSBP(oxysterol binding protein)-related protein 4C
Chr5_+_18615175 1.02 AT5G45900.1
ThiF family protein
Chr1_-_13365172 1.01 AT1G35910.1
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_-_10213598 1.01 AT5G28237.1
AT5G28237.2
Pyridoxal-5'-phosphate-dependent enzyme family protein
Chr2_+_18641563 1.01 AT2G45210.1
SAUR-like auxin-responsive protein family
Chr2_-_9858778 1.00 AT2G23150.1
natural resistance-associated macrophage protein 3
Chr2_-_18784347 1.00 AT2G45580.3
AT2G45580.2
cytochrome P450, family 76, subfamily C, polypeptide 3
Chr2_-_10835483 1.00 AT2G25460.1
EEIG1/EHBP1 protein amino-terminal domain protein
Chr5_-_21938396 0.99 AT5G54060.1
UDP-glucose:flavonoid 3-o-glucosyltransferase
Chr1_-_17438357 0.98 AT1G47510.2
AT1G47510.3
AT1G47510.1
inositol polyphosphate 5-phosphatase 11
Chr1_+_29446861 0.98 AT1G78260.1
AT1G78260.2
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr1_-_10071108 0.98 AT1G28650.1
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr2_-_10835660 0.98 AT2G25460.2
EEIG1/EHBP1 protein amino-terminal domain protein
Chr3_-_6815403 0.97 AT3G19615.1
beta-1,4-xylosidase
Chr3_+_2003393 0.97 AT3G06490.1
myb domain protein 108
Chr2_-_12629640 0.97 AT2G29470.1
glutathione S-transferase tau 3
Chr1_+_2867203 0.97 AT1G08920.1
AT1G08920.2
AT1G08920.3
ERD (early response to dehydration) six-like 1
Chr4_+_13210230 0.96 AT4G26050.1
plant intracellular ras group-related LRR 8
Chr1_+_23168767 0.95 AT1G62570.1
flavin-monooxygenase glucosinolate S-oxygenase 4
Chr4_+_15862117 0.95 AT4G32870.1
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr1_+_29245050 0.93 AT1G77765.4
AT1G77765.2
AT1G77765.1
transmembrane protein
Chr1_-_19698482 0.93 AT1G52890.1
NAC domain containing protein 19
Chr4_+_12461907 0.93 AT4G24000.1
cellulose synthase like G2
Chr4_+_983970 0.93 AT4G02250.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr3_+_21621994 0.92 AT3G58450.2
AT3G58450.1
Adenine nucleotide alpha hydrolases-like superfamily protein
Chr4_+_13275200 0.92 AT4G26200.1
1-amino-cyclopropane-1-carboxylate synthase 7
Chr2_+_7606728 0.91 AT2G17500.2
AT2G17500.1
AT2G17500.3
AT2G17500.4
Auxin efflux carrier family protein
Chr2_+_13436485 0.91 AT2G31560.1
AT2G31560.3
AT2G31560.2
signal transducer/transcription protein, putative (DUF1685)
Chr4_-_15507176 0.91 AT4G32070.2
AT4G32070.1
Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
Chr4_+_12463312 0.91 AT4G24000.2
cellulose synthase like G2
Chr3_-_2498095 0.91 AT3G07820.1
Pectin lyase-like superfamily protein
Chr3_-_20769324 0.90 AT3G55970.2
AT3G55970.1
jasmonate-regulated gene 21
Chr1_-_22715448 0.90 AT1G61563.1
ralf-like 8
Chr5_-_24702761 0.90 AT5G61430.2
AT5G61430.1
NAC domain containing protein 100
Chr2_+_17325846 0.90 AT2G41540.4
AT2G41540.1
AT2G41540.2
AT2G41540.3
6-phosphogluconate dehydrogenase family protein
Chr2_-_18168381 0.90 AT2G43870.1
Pectin lyase-like superfamily protein
Chr5_+_2352436 0.89 AT5G07430.1
Pectin lyase-like superfamily protein
Chr3_+_4889063 0.89 AT3G14560.1
hypothetical protein
Chr2_-_2259633 0.88 AT2G05910.1
LURP-one-like protein (DUF567)
Chr1_+_175706 0.88 AT1G01480.1
1-amino-cyclopropane-1-carboxylate synthase 2
Chr3_+_1635194 0.88 AT3G05630.1
phospholipase D P2
Chr1_+_2274926 0.87 AT1G07400.1
HSP20-like chaperones superfamily protein
Chr3_+_18007098 0.87 AT3G48580.1
AT3G48580.2
AT3G48580.3
xyloglucan endotransglucosylase/hydrolase 11
Chr5_+_16441808 0.87 AT5G41080.2
PLC-like phosphodiesterases superfamily protein
Chr5_-_22133688 0.86 AT5G54510.1
Auxin-responsive GH3 family protein
Chr3_+_4355138 0.86 AT3G13400.2
SKU5 similar 13
Chr4_+_131422 0.86 AT4G00305.1
RING/U-box superfamily protein
Chr2_+_9585549 0.86 AT2G22560.1
Kinase interacting (KIP1-like) family protein
Chr5_+_2743319 0.86 AT5G08480.1
AT5G08480.3
AT5G08480.2
VQ motif-containing protein
Chr2_+_19375985 0.86 AT2G47190.1
myb domain protein 2
Chr5_+_25891449 0.86 AT5G64750.1
Integrase-type DNA-binding superfamily protein
Chr1_-_28318362 0.86 AT1G75450.1
AT1G75450.2
cytokinin oxidase 5
Chr4_-_7026224 0.86 AT4G11650.1
osmotin 34
Chr5_+_8541558 0.86 AT5G24860.2
flowering promoting factor 1
Chr5_+_16441655 0.85 AT5G41080.1
PLC-like phosphodiesterases superfamily protein
Chr1_-_27837443 0.85 AT1G74020.1
strictosidine synthase 2
Chr4_-_846792 0.85 AT4G01950.1
AT4G01950.2
glycerol-3-phosphate acyltransferase 3
Chr4_+_12612378 0.85 AT4G24380.1
AT4G24380.2
AT4G24380.5
AT4G24380.4
AT4G24380.3
AT4G24380.6
dihydrofolate reductase
Chr3_+_4354923 0.85 AT3G13400.1
SKU5 similar 13
Chr1_+_20386809 0.85 AT1G54575.2
hypothetical protein
Chr2_+_13809019 0.85 AT2G32530.1
cellulose synthase-like B3
Chr1_+_176141 0.84 AT1G01480.2
1-amino-cyclopropane-1-carboxylate synthase 2
Chr2_-_275002 0.84 AT2G01610.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr5_-_7106834 0.84 AT5G20940.1
Glycosyl hydrolase family protein
Chr3_-_10120645 0.84 AT3G27330.1
zinc finger (C3HC4-type RING finger) family protein
Chr2_+_6244772 0.84 AT2G14620.2
AT2G14620.3
AT2G14620.1
xyloglucan endotransglucosylase/hydrolase 10
Chr1_+_20387058 0.83 AT1G54575.1
hypothetical protein
Chr5_-_26857086 0.82 AT5G67310.1
cytochrome P450, family 81, subfamily G, polypeptide 1
Chr3_-_16984867 0.82 AT3G46230.1
heat shock protein 17.4
Chr5_-_5356353 0.81 AT5G16360.1
NC domain-containing protein-like protein
Chr1_+_28291698 0.80 AT1G75390.1
AT1G75390.2
basic leucine-zipper 44
Chr4_+_1306313 0.80 AT4G02940.1
oxidoreductase, 2OG-Fe(II) oxygenase family protein
Chr5_-_21439133 0.79 AT5G52882.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr2_+_16969673 0.78 AT2G40670.1
response regulator 16
Chr2_-_18784530 0.78 AT2G45580.1
cytochrome P450, family 76, subfamily C, polypeptide 3
Chr2_+_3618058 0.78 AT2G08986.1
hypothetical protein
Chr3_-_18980004 0.77 AT3G51090.2
AT3G51090.1
coiled-coil 90B-like protein (DUF1640)
Chr3_+_17692666 0.77 AT3G47950.1
H[+]-ATPase 4
Chr2_+_15033537 0.77 AT2G35765.1
hypothetical protein
Chr5_+_26705785 0.77 AT5G66870.1
ASYMMETRIC LEAVES 2-like 1
Chr2_-_16014991 0.77 AT2G38240.1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr3_+_17692853 0.76 AT3G47950.2
H[+]-ATPase 4
Chr1_-_16917053 0.76 AT1G44800.1
nodulin MtN21 /EamA-like transporter family protein
Chr1_-_20756656 0.76 AT1G55560.1
SKU5 similar 14
Chr4_-_15178849 0.75 AT4G31240.2
AT4G31240.1
protein kinase C-like zinc finger protein
Chr5_-_122507 0.75 AT5G01300.2
AT5G01300.1
AT5G01300.3
PEBP (phosphatidylethanolamine-binding protein) family protein
Chr1_+_480650 0.75 AT1G02390.1
glycerol-3-phosphate acyltransferase 2
Chr2_-_15013368 0.75 AT2G35710.2
Nucleotide-diphospho-sugar transferases superfamily protein
Chr3_-_1102763 0.75 AT3G04190.1
RmlC-like cupins superfamily protein
Chr5_+_23193163 0.75 AT5G57240.2
OSBP(oxysterol binding protein)-related protein 4C
Chr2_+_17849978 0.74 AT2G42890.3
MEI2-like 2
Chr2_+_17850292 0.74 AT2G42890.2
MEI2-like 2
Chr1_+_7146636 0.74 AT1G20630.1
catalase 1
Chr3_+_19417372 0.74 AT3G52370.2
AT3G52370.1
FASCICLIN-like arabinogalactan protein 15 precursor
Chr4_-_13975919 0.74 AT4G28140.1
Integrase-type DNA-binding superfamily protein
Chr1_+_10010124 0.74 AT1G28470.1
NAC domain containing protein 10
Chr2_-_14541617 0.74 AT2G34500.1
cytochrome P450, family 710, subfamily A, polypeptide 1
Chr5_-_9000345 0.74 AT5G25820.1
Exostosin family protein
Chr4_-_18179183 0.74 AT4G39010.2
AT4G39010.1
glycosyl hydrolase 9B18
Chr3_-_20361560 0.74 AT3G54950.1
patatin-like protein 6
Chr1_+_10169084 0.74 AT1G29100.1
Heavy metal transport/detoxification superfamily protein
Chr1_-_1224372 0.74 AT1G04500.4
AT1G04500.2
AT1G04500.1
CCT motif family protein
Chr2_+_8998450 0.74 AT2G20920.1
chaperone (DUF3353)
Chr1_-_28396677 0.74 AT1G75620.1
glyoxal oxidase-related protein
Chr5_-_23367063 0.74 AT5G57685.1
glutamine dumper 3
Chr3_+_23438396 0.73 AT3G63470.1
serine carboxypeptidase-like 40
Chr3_-_1628175 0.73 AT3G05610.1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr2_+_12322386 0.72 AT2G28710.1
C2H2-type zinc finger family protein
Chr4_-_810574 0.72 AT4G01870.1
AT4G01870.2
tolB protein-like protein
Chr3_+_19880504 0.72 AT3G53620.1
pyrophosphorylase 4
Chr1_-_10720843 0.72 AT1G30370.1
alpha/beta-Hydrolases superfamily protein
Chr1_+_4243904 0.72 AT1G12450.1
SNARE associated Golgi protein family
Chr2_-_16359943 0.72 AT2G39200.1
Seven transmembrane MLO family protein
Chr1_+_6886669 0.72 AT1G19850.1
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein
Chr2_+_17849819 0.72 AT2G42890.1
MEI2-like 2
Chr1_+_6886867 0.72 AT1G19850.2
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein
Chr1_+_10168717 0.72 AT1G29100.2
Heavy metal transport/detoxification superfamily protein
Chr2_+_16969854 0.72 AT2G40670.2
response regulator 16
Chr4_+_12717788 0.71 AT4G24640.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr4_+_14110799 0.71 AT4G28550.1
AT4G28550.2
AT4G28550.3
Ypt/Rab-GAP domain of gyp1p superfamily protein
Chr3_-_7864895 0.70 AT3G22240.1
cysteine-rich/transmembrane domain PCC1-like protein
Chr3_+_390720 0.70 AT3G02150.1
AT3G02150.2
plastid transcription factor 1
Chr1_-_17438159 0.70 AT1G47510.4
inositol polyphosphate 5-phosphatase 11
Chr2_-_18933544 0.70 AT2G46030.5
AT2G46030.4
ubiquitin-conjugating enzyme 6
Chr5_-_20506354 0.70 AT5G50360.1
von willebrand factor A domain protein
Chr3_+_19284339 0.69 AT3G51970.1
acyl-CoA sterol acyl transferase 1
Chr3_-_18241524 0.69 AT3G49210.1
O-acyltransferase (WSD1-like) family protein
Chr5_-_2458502 0.69 AT5G07730.1
transmembrane protein
Chr3_+_631824 0.69 AT3G02875.2
AT3G02875.1
AT3G02875.3
Peptidase M20/M25/M40 family protein
Chr5_-_4573137 0.69 AT5G14180.4
AT5G14180.2
Myzus persicae-induced lipase 1
Chr2_-_18128293 0.69 AT2G43740.1
AT2G43740.2
Mannose-binding lectin superfamily protein
Chr5_-_23896939 0.69 AT5G59220.1
PP2C protein (Clade A protein phosphatases type 2C)
Chr3_-_1548679 0.69 AT3G05390.1
S-adenosyl-L-methionine-dependent methyltransferase
Chr5_-_23896702 0.69 AT5G59220.2
PP2C protein (Clade A protein phosphatases type 2C)
Chr3_-_18241341 0.68 AT3G49210.2
O-acyltransferase (WSD1-like) family protein
Chr2_+_4743162 0.68 AT2G11810.1
AT2G11810.3
monogalactosyldiacylglycerol synthase type C
Chr2_-_18934044 0.68 AT2G46030.1
AT2G46030.2
AT2G46030.3
ubiquitin-conjugating enzyme 6
Chr2_-_12666113 0.68 AT2G29620.2
AT2G29620.1
AT2G29620.4
AT2G29620.3
dentin sialophosphoprotein
Chr1_-_4892332 0.68 AT1G14330.1
Galactose oxidase/kelch repeat superfamily protein
Chr2_-_13101371 0.68 AT2G30750.1
cytochrome P450 family 71 polypeptide
Chr1_+_29836644 0.68 AT1G79320.1
metacaspase 6
Chr2_-_9000228 0.68 AT2G20921.1
hypothetical protein
Chr5_+_23954582 0.68 AT5G59390.3
AT5G59390.1
AT5G59390.4
AT5G59390.5
XH/XS domain-containing protein
Chr1_+_10897925 0.68 AT1G30720.1
FAD-binding Berberine family protein
Chr4_+_17346805 0.68 AT4G36820.1
calcium uniporter (DUF607)
Chr1_-_28767517 0.67 AT1G76650.2
calmodulin-like 38
Chr1_+_10900681 0.67 AT1G30730.1
FAD-binding Berberine family protein
Chr2_-_14414788 0.67 AT2G34140.1
Dof-type zinc finger DNA-binding family protein
Chr2_-_17569669 0.67 AT2G42140.1
VQ motif-containing protein
Chr4_-_16686818 0.67 AT4G35060.1
Heavy metal transport/detoxification superfamily protein
Chr5_-_7643098 0.67 AT5G22860.4
AT5G22860.3
AT5G22860.1
AT5G22860.6
AT5G22860.7
AT5G22860.8
AT5G22860.2
AT5G22860.5
Serine carboxypeptidase S28 family protein
Chr3_-_1055196 0.67 AT3G04060.1
NAC domain containing protein 46
Chr4_-_9391726 0.66 AT4G16680.2
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_-_28767712 0.66 AT1G76650.1
calmodulin-like 38
Chr1_+_954290 0.66 AT1G03790.1
Zinc finger C-x8-C-x5-C-x3-H type family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G46830

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 2.5 GO:0042759 long-chain fatty acid biosynthetic process(GO:0042759)
0.5 1.6 GO:0016540 protein autoprocessing(GO:0016540)
0.5 1.6 GO:0015696 ammonium transport(GO:0015696)
0.5 1.4 GO:0009830 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
0.4 1.7 GO:0046475 glycerophospholipid catabolic process(GO:0046475)
0.4 1.2 GO:0016124 tetraterpenoid catabolic process(GO:0016110) carotenoid catabolic process(GO:0016118) xanthophyll catabolic process(GO:0016124)
0.4 3.3 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.4 1.2 GO:0044236 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.4 1.8 GO:0060151 peroxisome localization(GO:0060151)
0.3 1.4 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.3 1.0 GO:0016237 lysosomal microautophagy(GO:0016237) piecemeal microautophagy of nucleus(GO:0034727) single-organism membrane invagination(GO:1902534)
0.3 1.6 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.3 2.8 GO:0045836 positive regulation of meiotic nuclear division(GO:0045836)
0.3 1.5 GO:0006116 NADH oxidation(GO:0006116)
0.3 0.6 GO:0010597 green leaf volatile biosynthetic process(GO:0010597)
0.3 1.7 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.3 0.8 GO:0033530 raffinose metabolic process(GO:0033530)
0.3 1.6 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.3 1.1 GO:1900378 positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.2 1.2 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.2 1.0 GO:0006527 arginine catabolic process(GO:0006527)
0.2 1.0 GO:0015692 lead ion transport(GO:0015692)
0.2 1.1 GO:0018874 benzoate metabolic process(GO:0018874)
0.2 0.6 GO:0006659 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.2 0.8 GO:0034720 histone H3-K4 demethylation(GO:0034720)
0.2 1.0 GO:0006654 phosphatidic acid biosynthetic process(GO:0006654)
0.2 0.6 GO:0010024 phytochromobilin biosynthetic process(GO:0010024) phytochromobilin metabolic process(GO:0051202)
0.2 0.6 GO:0080168 abscisic acid transport(GO:0080168)
0.2 1.2 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.2 1.0 GO:0016137 glycoside metabolic process(GO:0016137)
0.2 0.8 GO:0097438 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
0.2 0.6 GO:0010124 phenylacetate catabolic process(GO:0010124)
0.2 0.7 GO:0006677 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.2 3.5 GO:0016024 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.2 0.5 GO:0090213 regulation of radial pattern formation(GO:0090213)
0.2 0.5 GO:0010045 response to nickel cation(GO:0010045)
0.2 0.9 GO:0046218 tryptophan catabolic process(GO:0006569) indolalkylamine catabolic process(GO:0046218)
0.2 0.9 GO:0010226 response to lithium ion(GO:0010226)
0.2 1.4 GO:0032973 amino acid export(GO:0032973)
0.2 0.5 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.2 1.5 GO:0051410 detoxification of nitrogen compound(GO:0051410)
0.2 0.3 GO:0010376 stomatal complex formation(GO:0010376)
0.2 0.6 GO:0043092 L-amino acid import(GO:0043092) L-glutamate import(GO:0051938) L-alpha-amino acid transmembrane transport(GO:1902475)
0.2 1.6 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.2 1.0 GO:0046339 diacylglycerol metabolic process(GO:0046339)
0.2 0.6 GO:0016098 monoterpenoid metabolic process(GO:0016098) monoterpenoid biosynthetic process(GO:0016099)
0.2 0.5 GO:0030030 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
0.1 0.1 GO:0009413 response to flooding(GO:0009413)
0.1 0.6 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.1 2.2 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.1 0.4 GO:0048832 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.1 0.6 GO:0033388 putrescine metabolic process(GO:0009445) putrescine biosynthetic process(GO:0009446) putrescine biosynthetic process from arginine(GO:0033388)
0.1 1.1 GO:0080165 callose deposition in phloem sieve plate(GO:0080165)
0.1 1.0 GO:0006597 spermine biosynthetic process(GO:0006597)
0.1 2.2 GO:0019374 galactolipid metabolic process(GO:0019374)
0.1 2.1 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.1 0.4 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.1 0.4 GO:0071763 nuclear membrane organization(GO:0071763)
0.1 0.5 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.1 0.7 GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport(GO:1902418)
0.1 0.1 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.1 0.5 GO:0019477 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.1 0.4 GO:0009996 negative regulation of cell fate specification(GO:0009996) negative regulation of trichoblast fate specification(GO:0010062) negative regulation of plant epidermal cell differentiation(GO:1903889)
0.1 0.4 GO:0090480 GDP-mannose transport(GO:0015784) purine nucleotide-sugar transmembrane transport(GO:0090480) GDP-mannose transmembrane transport(GO:1990570)
0.1 1.8 GO:0080027 response to herbivore(GO:0080027)
0.1 0.8 GO:0090059 protoxylem development(GO:0090059)
0.1 0.8 GO:0071244 cellular response to carbon dioxide(GO:0071244)
0.1 0.6 GO:1900367 positive regulation of defense response to insect(GO:1900367)
0.1 0.3 GO:0006420 arginyl-tRNA aminoacylation(GO:0006420)
0.1 0.1 GO:0042178 xenobiotic catabolic process(GO:0042178)
0.1 0.6 GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway(GO:0010142) isoprenoid biosynthetic process via mevalonate(GO:1902767)
0.1 0.3 GO:1990116 ribosome-associated ubiquitin-dependent protein catabolic process(GO:1990116)
0.1 0.9 GO:0009939 positive regulation of gibberellic acid mediated signaling pathway(GO:0009939)
0.1 0.3 GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000447)
0.1 0.3 GO:0072530 purine-containing compound transmembrane transport(GO:0072530)
0.1 0.3 GO:0060860 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.1 0.4 GO:0071836 nectar secretion(GO:0071836)
0.1 1.0 GO:0009942 longitudinal axis specification(GO:0009942)
0.1 0.9 GO:0098719 sodium ion transmembrane transport(GO:0035725) sodium ion import(GO:0097369) sodium ion import across plasma membrane(GO:0098719) sodium ion import into cell(GO:1990118)
0.1 3.4 GO:0010252 auxin homeostasis(GO:0010252)
0.1 1.9 GO:0046855 inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.1 0.4 GO:0018315 molybdenum incorporation into molybdenum-molybdopterin complex(GO:0018315) metal incorporation into metallo-molybdopterin complex(GO:0042040)
0.1 2.8 GO:0009083 branched-chain amino acid catabolic process(GO:0009083)
0.1 0.3 GO:2000029 regulation of proanthocyanidin biosynthetic process(GO:2000029)
0.1 0.3 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.1 0.2 GO:1904062 regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.1 0.3 GO:1900111 positive regulation of histone H3-K9 dimethylation(GO:1900111)
0.1 1.5 GO:0031408 oxylipin biosynthetic process(GO:0031408)
0.1 0.6 GO:0009068 aspartate family amino acid catabolic process(GO:0009068)
0.1 0.3 GO:0034551 respiratory chain complex III assembly(GO:0017062) mitochondrial respiratory chain complex III assembly(GO:0034551) mitochondrial respiratory chain complex III biogenesis(GO:0097033)
0.1 1.6 GO:0015770 sucrose transport(GO:0015770)
0.1 0.3 GO:0071415 cellular response to alkaloid(GO:0071312) cellular response to caffeine(GO:0071313) cellular response to purine-containing compound(GO:0071415) negative regulation of cellular response to caffeine(GO:1901181)
0.1 0.2 GO:0099636 cytoplasmic streaming(GO:0099636)
0.1 0.5 GO:0006624 vacuolar protein processing(GO:0006624)
0.1 0.8 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.1 1.4 GO:0048465 petal development(GO:0048441) corolla development(GO:0048465)
0.1 0.8 GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.1 0.7 GO:0018210 peptidyl-threonine phosphorylation(GO:0018107) peptidyl-threonine modification(GO:0018210)
0.1 2.5 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.1 0.2 GO:0046740 transport of virus in host, cell to cell(GO:0046740) multi-organism intercellular transport(GO:1902586)
0.1 0.2 GO:0034625 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.1 0.3 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.1 0.5 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.1 0.4 GO:0031929 TOR signaling(GO:0031929)
0.1 0.3 GO:0022615 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.1 0.4 GO:0030322 stabilization of membrane potential(GO:0030322)
0.1 0.2 GO:0010198 synergid death(GO:0010198)
0.1 0.4 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.1 0.2 GO:0002188 translation reinitiation(GO:0002188)
0.1 0.1 GO:0045717 negative regulation of fatty acid biosynthetic process(GO:0045717)
0.1 0.4 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.1 0.4 GO:0010508 positive regulation of autophagy(GO:0010508)
0.1 0.7 GO:0017183 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.1 0.2 GO:0060967 negative regulation of gene silencing by RNA(GO:0060967) negative regulation of RNA interference(GO:1900369)
0.1 0.2 GO:0034058 endosomal vesicle fusion(GO:0034058)
0.1 1.3 GO:0002213 defense response to insect(GO:0002213)
0.1 0.3 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.1 0.2 GO:0051352 negative regulation of protein ubiquitination(GO:0031397) negative regulation of ligase activity(GO:0051352) negative regulation of ubiquitin-protein transferase activity(GO:0051444) negative regulation of ubiquitin protein ligase activity(GO:1904667)
0.1 0.4 GO:0043570 maintenance of DNA repeat elements(GO:0043570)
0.1 0.3 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.1 0.4 GO:0009745 sucrose mediated signaling(GO:0009745)
0.1 0.3 GO:0050993 dimethylallyl diphosphate biosynthetic process(GO:0050992) dimethylallyl diphosphate metabolic process(GO:0050993)
0.1 0.2 GO:0048255 mRNA stabilization(GO:0048255)
0.1 0.6 GO:0010358 leaf shaping(GO:0010358)
0.1 0.1 GO:2000045 regulation of G1/S transition of mitotic cell cycle(GO:2000045)
0.1 0.2 GO:1902065 response to L-glutamate(GO:1902065)
0.1 0.2 GO:1902066 regulation of cell wall pectin metabolic process(GO:1902066)
0.1 0.2 GO:0001732 formation of cytoplasmic translation initiation complex(GO:0001732)
0.1 1.0 GO:0046164 alcohol catabolic process(GO:0046164)
0.1 0.2 GO:0051176 positive regulation of sulfur metabolic process(GO:0051176)
0.1 1.6 GO:0051453 regulation of cellular pH(GO:0030641) regulation of intracellular pH(GO:0051453)
0.1 0.9 GO:0006032 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.1 0.2 GO:1900151 positive regulation of mRNA processing(GO:0050685) regulation of nuclear-transcribed mRNA poly(A) tail shortening(GO:0060211) positive regulation of mRNA catabolic process(GO:0061014) regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay(GO:1900151)
0.1 0.5 GO:1901002 positive regulation of response to salt stress(GO:1901002)
0.1 0.3 GO:0006537 glutamate biosynthetic process(GO:0006537)
0.1 0.7 GO:0042126 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128)
0.1 11.7 GO:0071456 cellular response to hypoxia(GO:0071456)
0.1 0.4 GO:0010047 fruit dehiscence(GO:0010047)
0.1 0.4 GO:0071168 protein localization to chromatin(GO:0071168)
0.1 0.1 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.1 2.1 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.1 0.4 GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement(GO:1901527)
0.1 0.2 GO:0035964 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.1 0.7 GO:1902074 response to salt(GO:1902074)
0.1 0.2 GO:0016584 nucleosome positioning(GO:0016584)
0.1 0.4 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.1 0.2 GO:0019427 acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.0 0.5 GO:1902025 nitrate import(GO:1902025)
0.0 0.1 GO:0010623 programmed cell death involved in cell development(GO:0010623)
0.0 0.4 GO:0000304 response to singlet oxygen(GO:0000304)
0.0 0.1 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.0 0.2 GO:0019336 phenol-containing compound catabolic process(GO:0019336)
0.0 0.1 GO:0071569 protein ufmylation(GO:0071569)
0.0 0.5 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 1.0 GO:0010082 regulation of root meristem growth(GO:0010082)
0.0 0.9 GO:0031048 chromatin silencing by small RNA(GO:0031048)
0.0 1.1 GO:0090630 activation of GTPase activity(GO:0090630)
0.0 0.2 GO:1902751 positive regulation of G2/M transition of mitotic cell cycle(GO:0010971) positive regulation of cell cycle G2/M phase transition(GO:1902751)
0.0 1.1 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.0 0.9 GO:0061572 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.0 0.4 GO:0006152 purine nucleoside catabolic process(GO:0006152)
0.0 0.3 GO:0090113 regulation of COPII vesicle coating(GO:0003400) regulation of ER to Golgi vesicle-mediated transport by GTP hydrolysis(GO:0090113)
0.0 0.5 GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043162)
0.0 0.2 GO:0048455 stamen formation(GO:0048455)
0.0 0.4 GO:0019673 GDP-mannose metabolic process(GO:0019673)
0.0 0.3 GO:0009963 positive regulation of flavonoid biosynthetic process(GO:0009963)
0.0 0.3 GO:0015689 molybdate ion transport(GO:0015689)
0.0 0.2 GO:0006435 threonyl-tRNA aminoacylation(GO:0006435)
0.0 0.7 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.0 1.2 GO:0006914 autophagy(GO:0006914)
0.0 0.6 GO:0010048 vernalization response(GO:0010048)
0.0 0.2 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 0.3 GO:0034311 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.0 0.2 GO:0045793 positive regulation of cell size(GO:0045793)
0.0 0.2 GO:2000758 positive regulation of histone acetylation(GO:0035066) positive regulation of protein acetylation(GO:1901985) positive regulation of peptidyl-lysine acetylation(GO:2000758)
0.0 0.1 GO:0051099 positive regulation of binding(GO:0051099)
0.0 0.3 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.0 0.3 GO:0033356 UDP-L-arabinose metabolic process(GO:0033356)
0.0 0.1 GO:0010246 rhamnogalacturonan I biosynthetic process(GO:0010246)
0.0 0.2 GO:0006517 protein deglycosylation(GO:0006517)
0.0 0.5 GO:0010274 hydrotropism(GO:0010274)
0.0 0.1 GO:0007032 endosome organization(GO:0007032)
0.0 0.1 GO:0045911 positive regulation of DNA recombination(GO:0045911)
0.0 0.2 GO:0071108 protein K48-linked deubiquitination(GO:0071108)
0.0 0.1 GO:0016598 protein arginylation(GO:0016598)
0.0 0.9 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.0 0.1 GO:0043171 peptide catabolic process(GO:0043171)
0.0 0.2 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.0 0.2 GO:0009435 NAD biosynthetic process(GO:0009435)
0.0 0.4 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.0 0.3 GO:0051814 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.0 0.1 GO:0080003 thalianol metabolic process(GO:0080003)
0.0 0.1 GO:0033478 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.0 0.3 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.0 0.2 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.0 0.2 GO:0009962 regulation of flavonoid biosynthetic process(GO:0009962)
0.0 0.2 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.0 2.6 GO:0070646 protein modification by small protein removal(GO:0070646)
0.0 0.4 GO:0051865 protein autoubiquitination(GO:0051865)
0.0 0.4 GO:0010052 guard cell differentiation(GO:0010052)
0.0 0.2 GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid(GO:0009961)
0.0 0.2 GO:0006817 phosphate ion transport(GO:0006817)
0.0 0.2 GO:0043447 alkane biosynthetic process(GO:0043447)
0.0 0.1 GO:0070922 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.0 0.1 GO:0034508 centromere complex assembly(GO:0034508)
0.0 0.1 GO:0015846 polyamine transport(GO:0015846)
0.0 0.1 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.0 0.3 GO:0015691 cadmium ion transport(GO:0015691)
0.0 0.2 GO:0009819 drought recovery(GO:0009819)
0.0 0.2 GO:0071586 CAAX-box protein processing(GO:0071586) CAAX-box protein maturation(GO:0080120)
0.0 0.8 GO:0009813 flavonoid biosynthetic process(GO:0009813)
0.0 0.1 GO:0070070 proton-transporting V-type ATPase complex assembly(GO:0070070) vacuolar proton-transporting V-type ATPase complex assembly(GO:0070072)
0.0 0.1 GO:0006747 FAD biosynthetic process(GO:0006747) flavin adenine dinucleotide biosynthetic process(GO:0072388)
0.0 0.2 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.0 0.3 GO:0045910 negative regulation of DNA recombination(GO:0045910)
0.0 0.1 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.0 0.4 GO:0060688 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.0 0.5 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.0 0.6 GO:1900674 ethylene metabolic process(GO:0009692) ethylene biosynthetic process(GO:0009693) cellular alkene metabolic process(GO:0043449) alkene biosynthetic process(GO:0043450) olefin metabolic process(GO:1900673) olefin biosynthetic process(GO:1900674)
0.0 0.7 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 0.1 GO:0006409 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.0 1.5 GO:0009808 lignin metabolic process(GO:0009808)
0.0 0.1 GO:0006097 glyoxylate cycle(GO:0006097)
0.0 0.1 GO:0043410 positive regulation of MAPK cascade(GO:0043410)
0.0 0.4 GO:0031053 primary miRNA processing(GO:0031053)
0.0 0.1 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.0 0.0 GO:0034389 lipid particle organization(GO:0034389)
0.0 0.1 GO:0090646 mitochondrial tRNA processing(GO:0090646)
0.0 0.1 GO:0015919 peroxisomal membrane transport(GO:0015919)
0.0 0.3 GO:0002221 pattern recognition receptor signaling pathway(GO:0002221)
0.0 0.1 GO:0006430 lysyl-tRNA aminoacylation(GO:0006430)
0.0 0.1 GO:0070207 protein homotrimerization(GO:0070207)
0.0 0.5 GO:0006108 malate metabolic process(GO:0006108)
0.0 0.4 GO:0042147 retrograde transport, endosome to Golgi(GO:0042147)
0.0 0.1 GO:0010589 leaf proximal/distal pattern formation(GO:0010589)
0.0 0.6 GO:0007031 peroxisome organization(GO:0007031)
0.0 1.2 GO:1902600 hydrogen ion transmembrane transport(GO:1902600)
0.0 0.2 GO:0000731 DNA synthesis involved in DNA repair(GO:0000731)
0.0 2.0 GO:0000209 protein polyubiquitination(GO:0000209)
0.0 0.1 GO:0042344 indole glucosinolate catabolic process(GO:0042344)
0.0 0.1 GO:0010120 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.0 0.1 GO:0051775 response to redox state(GO:0051775)
0.0 0.1 GO:0070509 calcium ion import(GO:0070509)
0.0 0.2 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.0 0.2 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.0 0.2 GO:1902115 regulation of organelle assembly(GO:1902115)
0.0 0.2 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.0 0.2 GO:0006814 sodium ion transport(GO:0006814)
0.0 0.3 GO:0009313 oligosaccharide catabolic process(GO:0009313) disaccharide catabolic process(GO:0046352)
0.0 0.0 GO:0042908 xenobiotic transport(GO:0042908)
0.0 0.3 GO:0052325 cell wall pectin biosynthetic process(GO:0052325)
0.0 0.1 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.0 0.3 GO:0018126 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.3 GO:0080060 integument development(GO:0080060)
0.0 0.1 GO:0032366 intracellular sterol transport(GO:0032366)
0.0 0.2 GO:0005513 detection of calcium ion(GO:0005513)
0.0 0.1 GO:0043486 histone exchange(GO:0043486)
0.0 0.4 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.0 0.1 GO:2000769 establishment or maintenance of cell polarity regulating cell shape(GO:0071963) regulation of establishment or maintenance of cell polarity regulating cell shape(GO:2000769)
0.0 0.4 GO:0031647 regulation of protein stability(GO:0031647)
0.0 0.1 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.0 0.1 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.0 0.3 GO:0010093 specification of floral organ identity(GO:0010093)
0.0 0.0 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.0 0.1 GO:0010231 maintenance of seed dormancy(GO:0010231) maintenance of dormancy(GO:0097437)
0.0 0.2 GO:0010105 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.0 0.9 GO:0000380 alternative mRNA splicing, via spliceosome(GO:0000380)
0.0 0.1 GO:0048766 root hair initiation(GO:0048766)
0.0 0.3 GO:0098876 vesicle-mediated transport to the plasma membrane(GO:0098876)
0.0 0.1 GO:0006370 7-methylguanosine mRNA capping(GO:0006370)
0.0 0.1 GO:0071492 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.0 0.1 GO:0019320 hexose catabolic process(GO:0019320)
0.0 0.6 GO:0085029 pollen wall assembly(GO:0010208) cellular component assembly involved in morphogenesis(GO:0010927) extracellular matrix assembly(GO:0085029)
0.0 0.1 GO:0009554 megasporogenesis(GO:0009554)
0.0 0.1 GO:0048439 flower morphogenesis(GO:0048439)
0.0 0.4 GO:0006012 galactose metabolic process(GO:0006012)
0.0 0.1 GO:0030307 positive regulation of cell growth(GO:0030307)
0.0 0.2 GO:0000054 ribosomal subunit export from nucleus(GO:0000054) ribosome localization(GO:0033750) establishment of ribosome localization(GO:0033753) rRNA-containing ribonucleoprotein complex export from nucleus(GO:0071428)
0.0 0.1 GO:0043153 entrainment of circadian clock by photoperiod(GO:0043153)
0.0 0.2 GO:0006298 mismatch repair(GO:0006298)
0.0 0.6 GO:0009911 positive regulation of flower development(GO:0009911)
0.0 0.1 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.3 GO:0046856 phosphatidylinositol dephosphorylation(GO:0046856)
0.0 0.1 GO:0050691 regulation of defense response to virus by host(GO:0050691)
0.0 0.5 GO:0006338 chromatin remodeling(GO:0006338)
0.0 0.0 GO:0008334 histone mRNA metabolic process(GO:0008334)
0.0 0.5 GO:0010286 heat acclimation(GO:0010286)
0.0 0.3 GO:0010167 response to nitrate(GO:0010167)
0.0 0.7 GO:0016036 cellular response to phosphate starvation(GO:0016036)
0.0 0.4 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.0 0.2 GO:0045040 outer mitochondrial membrane organization(GO:0007008) protein import into mitochondrial outer membrane(GO:0045040)
0.0 0.3 GO:0035265 organ growth(GO:0035265)
0.0 0.2 GO:0015865 purine nucleotide transport(GO:0015865)
0.0 0.8 GO:0010256 endomembrane system organization(GO:0010256)
0.0 0.1 GO:0051316 attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation(GO:0051316) attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation(GO:0051455) microtubule cytoskeleton organization involved in homologous chromosome segregation(GO:0090172)
0.0 0.3 GO:0030050 vesicle transport along actin filament(GO:0030050) vesicle cytoskeletal trafficking(GO:0099518)
0.0 0.1 GO:0015749 monosaccharide transport(GO:0015749)
0.0 0.1 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.0 0.5 GO:0006749 glutathione metabolic process(GO:0006749)
0.0 0.6 GO:0034605 cellular response to heat(GO:0034605)
0.0 0.2 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.0 0.2 GO:0009395 phospholipid catabolic process(GO:0009395)
0.0 0.0 GO:0071423 malate transmembrane transport(GO:0071423)
0.0 0.5 GO:0006333 chromatin assembly or disassembly(GO:0006333)
0.0 0.3 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 0.1 GO:0036297 interstrand cross-link repair(GO:0036297)
0.0 0.2 GO:0015937 coenzyme A biosynthetic process(GO:0015937)
0.0 0.1 GO:0010088 phloem development(GO:0010088)
0.0 0.2 GO:0030042 actin filament depolymerization(GO:0030042)
0.0 0.2 GO:0072329 monocarboxylic acid catabolic process(GO:0072329)
0.0 0.1 GO:0010821 regulation of mitochondrion organization(GO:0010821)
0.0 0.5 GO:0009567 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.0 0.1 GO:0006102 isocitrate metabolic process(GO:0006102)
0.0 0.3 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.4 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 2.2 GO:0030062 mitochondrial alpha-ketoglutarate dehydrogenase complex(GO:0005947) mitochondrial tricarboxylic acid cycle enzyme complex(GO:0030062)
0.3 1.5 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.2 1.1 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.1 0.7 GO:0035061 interchromatin granule(GO:0035061)
0.1 3.4 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.1 1.1 GO:0035619 root hair tip(GO:0035619)
0.1 1.5 GO:0000407 pre-autophagosomal structure(GO:0000407)
0.1 0.6 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.1 0.3 GO:1990112 RQC complex(GO:1990112)
0.1 0.5 GO:0005776 autophagosome(GO:0005776)
0.1 0.7 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.1 1.8 GO:0031012 extracellular matrix(GO:0031012)
0.1 1.2 GO:0005801 cis-Golgi network(GO:0005801)
0.1 0.2 GO:0000172 ribonuclease MRP complex(GO:0000172)
0.1 1.1 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.1 0.4 GO:0031931 TORC1 complex(GO:0031931) TOR complex(GO:0038201)
0.1 1.2 GO:0016459 myosin complex(GO:0016459)
0.1 0.3 GO:0030906 retromer, cargo-selective complex(GO:0030906)
0.1 0.5 GO:0071006 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.1 0.6 GO:0071014 post-mRNA release spliceosomal complex(GO:0071014)
0.1 1.3 GO:0044463 cell projection part(GO:0044463)
0.1 0.2 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.1 0.3 GO:0005782 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.1 0.5 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 0.6 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 0.2 GO:0032301 MutSalpha complex(GO:0032301)
0.0 0.1 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.0 0.1 GO:0055037 recycling endosome(GO:0055037)
0.0 0.3 GO:0005677 chromatin silencing complex(GO:0005677)
0.0 0.2 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.0 0.2 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.0 0.1 GO:0045334 clathrin-coated endocytic vesicle(GO:0045334)
0.0 0.2 GO:0001673 male germ cell nucleus(GO:0001673)
0.0 0.4 GO:0016471 vacuolar proton-transporting V-type ATPase complex(GO:0016471)
0.0 0.8 GO:0071011 precatalytic spliceosome(GO:0071011)
0.0 0.4 GO:0010445 nuclear dicing body(GO:0010445)
0.0 1.7 GO:0016592 mediator complex(GO:0016592)
0.0 0.4 GO:0035267 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.0 0.3 GO:0000813 ESCRT I complex(GO:0000813)
0.0 0.1 GO:0005769 early endosome(GO:0005769)
0.0 2.0 GO:0016607 nuclear speck(GO:0016607)
0.0 0.1 GO:0009514 glyoxysome(GO:0009514)
0.0 0.4 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.0 0.1 GO:0034703 ion channel complex(GO:0034702) cation channel complex(GO:0034703)
0.0 0.1 GO:0097344 Rix1 complex(GO:0097344)
0.0 0.2 GO:0030897 HOPS complex(GO:0030897)
0.0 0.1 GO:0035145 exon-exon junction complex(GO:0035145)
0.0 0.2 GO:0034657 GID complex(GO:0034657)
0.0 1.7 GO:0090406 pollen tube(GO:0090406)
0.0 0.1 GO:0036387 nuclear pre-replicative complex(GO:0005656) pre-replicative complex(GO:0036387)
0.0 0.1 GO:0033290 eukaryotic 48S preinitiation complex(GO:0033290)
0.0 0.2 GO:0000346 transcription export complex(GO:0000346) THO complex part of transcription export complex(GO:0000445)
0.0 2.6 GO:0005681 spliceosomal complex(GO:0005681)
0.0 0.1 GO:0031211 palmitoyltransferase complex(GO:0002178) serine C-palmitoyltransferase complex(GO:0017059) endoplasmic reticulum palmitoyltransferase complex(GO:0031211)
0.0 0.5 GO:0005750 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.0 0.5 GO:0031965 nuclear membrane(GO:0031965)
0.0 0.1 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.0 0.1 GO:0000783 telomere cap complex(GO:0000782) nuclear telomere cap complex(GO:0000783)
0.0 1.6 GO:0015629 actin cytoskeleton(GO:0015629)
0.0 0.5 GO:0034399 nuclear periphery(GO:0034399)
0.0 0.3 GO:0008180 COP9 signalosome(GO:0008180)
0.0 0.1 GO:0030896 checkpoint clamp complex(GO:0030896)
0.0 0.2 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778)
0.0 0.4 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 0.6 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 0.1 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.0 0.1 GO:0043625 delta DNA polymerase complex(GO:0043625)
0.0 0.2 GO:0000109 nucleotide-excision repair complex(GO:0000109)
0.0 0.1 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.0 0.3 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.0 0.2 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.0 0.2 GO:0005798 Golgi-associated vesicle(GO:0005798)
0.0 1.8 GO:0005615 extracellular space(GO:0005615)
0.0 0.4 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 0.6 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 0.1 GO:0000439 core TFIIH complex(GO:0000439)
0.0 0.2 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.0 0.1 GO:0005845 mRNA cap binding complex(GO:0005845) RNA cap binding complex(GO:0034518)
0.0 0.4 GO:0098799 outer mitochondrial membrane protein complex(GO:0098799)
0.0 0.3 GO:0009986 cell surface(GO:0009986)
0.0 0.1 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 0.3 GO:0035097 histone methyltransferase complex(GO:0035097)
0.0 0.4 GO:0000123 histone acetyltransferase complex(GO:0000123)
0.0 1.1 GO:0000139 Golgi membrane(GO:0000139)
0.0 0.1 GO:0017053 transcriptional repressor complex(GO:0017053)
0.0 0.0 GO:1990415 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
0.0 1.0 GO:0005635 nuclear envelope(GO:0005635)
0.0 0.2 GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.0 0.1 GO:0009840 chloroplastic endopeptidase Clp complex(GO:0009840)
0.0 0.2 GO:0005779 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.0 0.2 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.0 0.2 GO:0019774 proteasome core complex, beta-subunit complex(GO:0019774)
0.0 0.4 GO:0000145 exocyst(GO:0000145)
0.0 0.1 GO:0005786 signal recognition particle, endoplasmic reticulum targeting(GO:0005786)
0.0 2.5 GO:0005802 trans-Golgi network(GO:0005802)
0.0 0.1 GO:0000791 euchromatin(GO:0000791)
0.0 0.5 GO:0000502 proteasome complex(GO:0000502)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 6.4 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.9 3.5 GO:0052578 alpha-farnesene synthase activity(GO:0052578)
0.5 1.5 GO:0019779 Atg8 activating enzyme activity(GO:0019779)
0.5 1.5 GO:0008798 beta-aspartyl-peptidase activity(GO:0008798)
0.4 1.3 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.4 2.2 GO:0003863 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity(GO:0003863)
0.4 3.2 GO:0045543 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.4 3.5 GO:0004366 glycerol-3-phosphate O-acyltransferase activity(GO:0004366)
0.4 1.8 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
0.3 1.3 GO:0004556 alpha-amylase activity(GO:0004556)
0.3 1.5 GO:0016768 spermine synthase activity(GO:0016768)
0.3 0.3 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.3 2.0 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.3 1.4 GO:1990137 plant seed peroxidase activity(GO:1990137)
0.3 1.1 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.3 2.9 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.2 1.7 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.2 1.2 GO:0016629 12-oxophytodienoate reductase activity(GO:0016629)
0.2 1.5 GO:0080061 nitrilase activity(GO:0000257) hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles(GO:0016815) nitrile hydratase activity(GO:0018822) indole-3-acetonitrile nitrilase activity(GO:0080061)
0.2 0.4 GO:0010436 carotenoid dioxygenase activity(GO:0010436)
0.2 0.6 GO:0022858 L-alanine transmembrane transporter activity(GO:0015180) alanine transmembrane transporter activity(GO:0022858)
0.2 0.6 GO:0052640 salicylic acid glucosyltransferase (glucoside-forming) activity(GO:0052640)
0.2 0.8 GO:0030742 GTP-dependent protein binding(GO:0030742)
0.2 1.3 GO:0004031 aldehyde oxidase activity(GO:0004031)
0.2 0.7 GO:0004348 glucosylceramidase activity(GO:0004348)
0.2 0.6 GO:0004421 hydroxymethylglutaryl-CoA synthase activity(GO:0004421)
0.2 0.2 GO:0097157 U2 snRNA binding(GO:0030620) pre-mRNA intronic binding(GO:0097157)
0.2 0.5 GO:0052692 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
0.2 0.5 GO:0052628 4-aminobenzoate amino acid synthetase activity(GO:0052625) benzoate amino acid synthetase activity(GO:0052626) vanillate amino acid synthetase activity(GO:0052627) 4-hydroxybenzoate amino acid synthetase activity(GO:0052628)
0.2 0.5 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.2 0.5 GO:0004140 dephospho-CoA kinase activity(GO:0004140)
0.2 0.8 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.2 0.6 GO:0004000 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.2 0.6 GO:0050284 sinapate 1-glucosyltransferase activity(GO:0050284)
0.1 0.7 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.1 0.6 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
0.1 0.7 GO:0010179 IAA-Ala conjugate hydrolase activity(GO:0010179)
0.1 0.4 GO:0045430 chalcone isomerase activity(GO:0045430)
0.1 0.4 GO:0046524 sucrose-phosphate synthase activity(GO:0046524)
0.1 0.7 GO:1902417 (+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity(GO:1902417)
0.1 0.5 GO:0080042 ADP-glucose pyrophosphohydrolase activity(GO:0080042)
0.1 1.4 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.1 0.5 GO:0016751 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.1 0.6 GO:0008732 threonine aldolase activity(GO:0004793) L-allo-threonine aldolase activity(GO:0008732)
0.1 1.0 GO:0008083 growth factor activity(GO:0008083)
0.1 0.4 GO:0008481 sphinganine kinase activity(GO:0008481)
0.1 0.6 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.1 2.2 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
0.1 0.4 GO:0052629 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.1 1.7 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.1 2.9 GO:0010427 abscisic acid binding(GO:0010427)
0.1 0.4 GO:0005458 GDP-mannose transmembrane transporter activity(GO:0005458)
0.1 0.4 GO:0045437 uridine nucleosidase activity(GO:0045437) ribosylpyrimidine nucleosidase activity(GO:0050263)
0.1 0.8 GO:0004834 tryptophan synthase activity(GO:0004834)
0.1 0.5 GO:0080103 4-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080103)
0.1 0.5 GO:1990269 phosphoserine binding(GO:0050815) RNA polymerase II C-terminal domain phosphoserine binding(GO:1990269)
0.1 0.7 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 0.3 GO:0004814 arginine-tRNA ligase activity(GO:0004814)
0.1 0.6 GO:0015116 sulfate transmembrane transporter activity(GO:0015116)
0.1 1.1 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.1 0.3 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.1 0.4 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.1 0.3 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.1 1.4 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.1 1.8 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.1 0.5 GO:0050551 myrcene synthase activity(GO:0050551)
0.1 0.5 GO:0032036 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.1 0.6 GO:0030527 structural constituent of chromatin(GO:0030527)
0.1 1.0 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.1 1.1 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.1 0.7 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.1 0.3 GO:0004046 aminoacylase activity(GO:0004046)
0.1 0.3 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.1 0.6 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.1 0.5 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.1 0.8 GO:0030291 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.1 0.3 GO:0047209 coniferyl-alcohol glucosyltransferase activity(GO:0047209)
0.1 0.1 GO:0001016 polymerase III regulatory region sequence-specific DNA binding(GO:0000992) RNA polymerase III type 3 promoter sequence-specific DNA binding(GO:0001006) RNA polymerase III regulatory region DNA binding(GO:0001016) RNA polymerase III type 3 promoter DNA binding(GO:0001032)
0.1 0.3 GO:0016643 glutamate synthase (ferredoxin) activity(GO:0016041) oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor(GO:0016643)
0.1 1.3 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
0.1 3.2 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.1 1.0 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.1 1.6 GO:0015248 sterol transporter activity(GO:0015248)
0.1 0.3 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726)
0.1 2.8 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.1 0.1 GO:0015185 gamma-aminobutyric acid transmembrane transporter activity(GO:0015185)
0.1 1.2 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.1 0.6 GO:0102391 acyl-CoA ligase activity(GO:0003996) decanoate--CoA ligase activity(GO:0102391)
0.1 0.3 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
0.1 1.2 GO:0016157 sucrose synthase activity(GO:0016157)
0.1 0.2 GO:0000309 nicotinamide-nucleotide adenylyltransferase activity(GO:0000309)
0.1 0.5 GO:0030544 Hsp70 protein binding(GO:0030544)
0.1 0.5 GO:0015166 myo-inositol transmembrane transporter activity(GO:0005365) polyol transmembrane transporter activity(GO:0015166)
0.1 0.5 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.1 0.2 GO:0008265 Mo-molybdopterin cofactor sulfurase activity(GO:0008265)
0.1 1.4 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.1 0.4 GO:0022841 leak channel activity(GO:0022840) potassium ion leak channel activity(GO:0022841) narrow pore channel activity(GO:0022842)
0.1 0.4 GO:0042800 histone methyltransferase activity (H3-K4 specific)(GO:0042800)
0.1 0.4 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.1 0.2 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.1 0.1 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.1 1.3 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.1 0.4 GO:0052654 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.1 0.9 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.1 0.3 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.1 0.3 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.1 0.2 GO:0004776 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.1 0.4 GO:0042171 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.1 2.0 GO:0004713 protein tyrosine kinase activity(GO:0004713)
0.1 0.2 GO:0008460 dTDP-glucose 4,6-dehydratase activity(GO:0008460)
0.1 0.9 GO:0017025 TBP-class protein binding(GO:0017025)
0.1 0.4 GO:0017070 U6 snRNA binding(GO:0017070)
0.1 0.3 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
0.1 0.3 GO:0016531 copper chaperone activity(GO:0016531)
0.1 0.3 GO:0047627 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.1 2.4 GO:0017137 Rab GTPase binding(GO:0017137)
0.1 2.2 GO:0045735 nutrient reservoir activity(GO:0045735)
0.1 0.2 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.1 0.2 GO:0008301 DNA binding, bending(GO:0008301)
0.1 0.3 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.1 3.5 GO:0004650 polygalacturonase activity(GO:0004650)
0.1 0.2 GO:0032143 single base insertion or deletion binding(GO:0032138) single thymine insertion binding(GO:0032143) mismatch repair complex binding(GO:0032404) MutLalpha complex binding(GO:0032405)
0.1 1.1 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.4 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 0.4 GO:0003997 acyl-CoA oxidase activity(GO:0003997)
0.1 0.2 GO:1990465 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.1 0.8 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.1 0.2 GO:0019789 SUMO transferase activity(GO:0019789)
0.0 0.2 GO:0034722 gamma-glutamyl-peptidase activity(GO:0034722)
0.0 0.8 GO:0015217 ADP transmembrane transporter activity(GO:0015217)
0.0 0.5 GO:0008113 peptide-methionine (S)-S-oxide reductase activity(GO:0008113)
0.0 1.4 GO:0000146 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 0.1 GO:0008936 nicotinamidase activity(GO:0008936)
0.0 0.2 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.0 0.6 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.0 0.8 GO:0015179 L-amino acid transmembrane transporter activity(GO:0015179)
0.0 0.6 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.0 0.5 GO:0004806 triglyceride lipase activity(GO:0004806)
0.0 0.2 GO:0016656 monodehydroascorbate reductase (NADH) activity(GO:0016656)
0.0 0.5 GO:0035198 miRNA binding(GO:0035198)
0.0 3.5 GO:0030599 pectinesterase activity(GO:0030599)
0.0 0.2 GO:0001046 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.0 1.7 GO:0004702 receptor signaling protein serine/threonine kinase activity(GO:0004702) MAP kinase activity(GO:0004707)
0.0 0.2 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.0 1.5 GO:0005179 hormone activity(GO:0005179)
0.0 0.6 GO:0030955 pyruvate kinase activity(GO:0004743) potassium ion binding(GO:0030955) alkali metal ion binding(GO:0031420)
0.0 0.1 GO:0035615 clathrin adaptor activity(GO:0035615) endocytic adaptor activity(GO:0098748)
0.0 0.2 GO:0000268 peroxisome targeting sequence binding(GO:0000268)
0.0 0.3 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.0 0.4 GO:0009922 fatty acid elongase activity(GO:0009922)
0.0 0.3 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.0 2.4 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.2 GO:0004829 threonine-tRNA ligase activity(GO:0004829)
0.0 0.4 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.0 0.2 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.0 0.7 GO:0070290 phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290)
0.0 2.2 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631) ubiquitin-like protein conjugating enzyme activity(GO:0061650)
0.0 0.3 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.0 0.7 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.0 0.2 GO:0004383 guanylate cyclase activity(GO:0004383)
0.0 0.3 GO:0005254 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.0 0.1 GO:0010428 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.0 0.1 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.0 0.2 GO:0050113 inositol oxygenase activity(GO:0050113)
0.0 0.1 GO:0004057 arginyltransferase activity(GO:0004057)
0.0 0.4 GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity(GO:0008107) alpha-(1,2)-fucosyltransferase activity(GO:0031127)
0.0 0.5 GO:0008252 nucleotidase activity(GO:0008252)
0.0 0.3 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.0 0.8 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 0.2 GO:0000062 fatty-acyl-CoA binding(GO:0000062)
0.0 0.5 GO:0005242 inward rectifier potassium channel activity(GO:0005242)
0.0 0.1 GO:0034593 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity(GO:0004439) phosphatidylinositol bisphosphate phosphatase activity(GO:0034593) phosphatidylinositol phosphate 5-phosphatase activity(GO:0034595)
0.0 0.7 GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors(GO:0016645)
0.0 0.5 GO:0031543 peptidyl-proline dioxygenase activity(GO:0031543)
0.0 0.1 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475)
0.0 2.1 GO:0036459 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)
0.0 0.3 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 0.8 GO:0004568 chitinase activity(GO:0004568)
0.0 0.2 GO:0001653 peptide receptor activity(GO:0001653)
0.0 0.2 GO:0015203 polyamine transmembrane transporter activity(GO:0015203)
0.0 0.5 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.0 0.4 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.0 0.2 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.0 0.1 GO:0008297 single-stranded DNA exodeoxyribonuclease activity(GO:0008297)
0.0 0.2 GO:0008022 protein C-terminus binding(GO:0008022)
0.0 0.1 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.0 0.1 GO:0038199 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.0 1.8 GO:0008237 metallopeptidase activity(GO:0008237)
0.0 1.3 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.0 0.1 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.0 1.7 GO:0051015 actin filament binding(GO:0051015)
0.0 0.1 GO:0016504 peptidase activator activity(GO:0016504)
0.0 1.0 GO:0003779 actin binding(GO:0003779)
0.0 0.7 GO:0008810 cellulase activity(GO:0008810)
0.0 1.2 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.1 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.0 0.2 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.0 0.2 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.0 0.4 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.3 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 0.4 GO:0035064 methylated histone binding(GO:0035064)
0.0 0.1 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
0.0 2.7 GO:0046982 protein heterodimerization activity(GO:0046982)
0.0 0.1 GO:0004824 lysine-tRNA ligase activity(GO:0004824)
0.0 0.5 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.5 GO:0031491 nucleosome binding(GO:0031491)
0.0 0.4 GO:0001098 RNA polymerase II core binding(GO:0000993) basal transcription machinery binding(GO:0001098) basal RNA polymerase II transcription machinery binding(GO:0001099)
0.0 2.6 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.0 0.3 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 0.2 GO:0009916 alternative oxidase activity(GO:0009916)
0.0 0.1 GO:0004619 phosphoglycerate mutase activity(GO:0004619)
0.0 0.0 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.0 0.1 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.0 0.3 GO:0017069 snRNA binding(GO:0017069)
0.0 0.1 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.0 0.8 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 1.6 GO:0003724 RNA helicase activity(GO:0003724)
0.0 1.2 GO:0051213 dioxygenase activity(GO:0051213)
0.0 0.2 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.0 2.9 GO:0061659 ubiquitin protein ligase activity(GO:0061630) ubiquitin-like protein ligase activity(GO:0061659)
0.0 0.1 GO:0017112 Rab guanyl-nucleotide exchange factor activity(GO:0017112)
0.0 0.3 GO:0051117 ATPase binding(GO:0051117)
0.0 3.6 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.0 0.1 GO:0004416 hydroxyacylglutathione hydrolase activity(GO:0004416)
0.0 0.3 GO:0008536 Ran GTPase binding(GO:0008536)
0.0 0.9 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.6 GO:0004725 protein tyrosine phosphatase activity(GO:0004725)
0.0 0.2 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.0 0.1 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.0 0.1 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.0 0.1 GO:0004758 serine C-palmitoyltransferase activity(GO:0004758) C-palmitoyltransferase activity(GO:0016454)
0.0 0.0 GO:0015152 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
0.0 0.4 GO:0045309 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.1 GO:0032452 histone demethylase activity(GO:0032452)
0.0 0.5 GO:0000295 adenine nucleotide transmembrane transporter activity(GO:0000295)
0.0 0.8 GO:0009931 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 0.1 GO:0016653 oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor(GO:0016653)
0.0 0.2 GO:0004575 sucrose alpha-glucosidase activity(GO:0004575)
0.0 0.1 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.0 0.1 GO:0005536 glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.0 0.6 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 0.4 GO:0005096 GTPase activator activity(GO:0005096)
0.0 0.1 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.0 0.3 GO:0097602 cullin family protein binding(GO:0097602)
0.0 1.1 GO:0003712 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.0 0.1 GO:0015369 calcium:proton antiporter activity(GO:0015369) metal ion:proton antiporter activity(GO:0051139)
0.0 0.2 GO:0050136 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 0.2 GO:0031369 translation initiation factor binding(GO:0031369)
0.0 0.1 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.0 1.1 GO:0003682 chromatin binding(GO:0003682)
0.0 0.0 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.0 0.1 GO:0030674 protein binding, bridging(GO:0030674)
0.0 0.1 GO:0036440 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.0 0.1 GO:0003913 DNA photolyase activity(GO:0003913)
0.0 1.8 GO:0005509 calcium ion binding(GO:0005509)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.3 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins
0.1 0.4 PID IL12 2PATHWAY IL12-mediated signaling events
0.1 0.4 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.1 0.2 PID MYC PATHWAY C-MYC pathway
0.1 0.2 SIG CHEMOTAXIS Genes related to chemotaxis
0.1 0.4 PID P73PATHWAY p73 transcription factor network
0.1 0.3 PID BETA CATENIN NUC PATHWAY Regulation of nuclear beta catenin signaling and target gene transcription
0.1 0.2 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.0 0.1 ST ERK1 ERK2 MAPK PATHWAY ERK1/ERK2 MAPK Pathway
0.0 0.1 PID AP1 PATHWAY AP-1 transcription factor network
0.0 0.2 PID ERBB1 DOWNSTREAM PATHWAY ErbB1 downstream signaling
0.0 0.0 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes
0.0 0.1 PID ATF2 PATHWAY ATF-2 transcription factor network
0.0 0.0 PID EPHA2 FWD PATHWAY EPHA2 forward signaling

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.4 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.1 0.4 REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS Genes involved in Sphingolipid de novo biosynthesis
0.1 0.3 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.1 0.4 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.1 0.3 REACTOME CYCLIN E ASSOCIATED EVENTS DURING G1 S TRANSITION Genes involved in Cyclin E associated events during G1/S transition
0.1 0.2 REACTOME BIOLOGICAL OXIDATIONS Genes involved in Biological oxidations
0.1 0.2 REACTOME GLUCOSE METABOLISM Genes involved in Glucose metabolism
0.0 0.1 REACTOME APOPTOTIC EXECUTION PHASE Genes involved in Apoptotic execution phase
0.0 0.4 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.0 0.1 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor
0.0 0.2 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.0 0.1 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.0 0.2 REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.0 0.9 REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT Genes involved in ABC-family proteins mediated transport
0.0 0.1 REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND Genes involved in Removal of the Flap Intermediate from the C-strand
0.0 0.2 REACTOME GENERIC TRANSCRIPTION PATHWAY Genes involved in Generic Transcription Pathway
0.0 0.0 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.0 0.1 REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES Genes involved in Metabolism of amino acids and derivatives
0.0 0.0 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation