ISMARA results: AT5G44210

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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G44210

Z-value: 0.32

Transcription factors associated with AT5G44210

Gene Symbol	Gene ID	Gene Info
AT5G44210 TAIR	AT5G44210	erf domain protein 9

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
ERF9	arTal_v1_Chr5_+_17806397_17806397	-0.82	6.8e-08	Click!

Activity profile of AT5G44210 motif

Sorted Z-values of AT5G44210 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
arTal_v1_Chr5_-_5741500_5741500 Show fit	0.71	AT5G17420.1	IRX3 TAIR Show fit	Cellulose synthase family protein
arTal_v1_Chr5_+_17714390_17714390 Show fit	0.61	AT5G44030.2 AT5G44030.1	CESA4 TAIR Show fit	cellulose synthase A4
arTal_v1_Chr1_+_3111694_3111694 Show fit	0.61	AT1G09610.1	GXM3 TAIR Show fit	glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
arTal_v1_Chr3_+_3203988_3203988 Show fit	0.56	AT3G10340.1	PAL4 TAIR Show fit	phenylalanine ammonia-lyase 4
arTal_v1_Chr2_-_15589369_15589369 Show fit	0.45	AT2G37090.1	IRX9 TAIR Show fit	Nucleotide-diphospho-sugar transferases superfamily protein
arTal_v1_Chr5_+_5084524_5084695 Show fit	0.39	AT5G15630.1 AT5G15630.2 AT5G15630.3 AT5G15630.4 AT5G15630.5	IRX6 TAIR Show fit	COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family
arTal_v1_Chr5_+_17715687_17715687 Show fit	0.36	AT5G44030.3	CESA4 TAIR Show fit	cellulose synthase A4
arTal_v1_Chr1_+_27076020_27076020 Show fit	0.24	AT1G71930.1	VND7 TAIR Show fit	vascular related NAC-domain protein 7
arTal_v1_Chr1_+_27074702_27074702 Show fit	0.20	AT1G71930.2	VND7 TAIR Show fit	vascular related NAC-domain protein 7
arTal_v1_Chr3_-_2578276_2578276 Show fit	0.16	AT3G08500.1	MYB83 TAIR Show fit	myb domain protein 83

Showing 1 to 10 of 11 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G44210

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	1.0	GO:0009833	plant-type primary cell wall biogenesis(GO:0009833)
0.1	0.7	GO:0010395	rhamnogalacturonan I metabolic process(GO:0010395)
0.1	0.6	GO:0009800	cinnamic acid biosynthetic process(GO:0009800)
0.0	0.5	GO:0010413	glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)
0.1	0.4	GO:0090059	protoxylem development(GO:0090059)
0.0	0.4	GO:0052324	plant-type cell wall cellulose biosynthetic process(GO:0052324)

Showing 1 to 6 of 6 entries

Gene overrepresentation in cellular component category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.2	0.7	GO:0010330	cellulose synthase complex(GO:0010330)

Showing 1 to 1 of 1 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	1.7	GO:0016760	cellulose synthase (UDP-forming) activity(GO:0016760)
0.1	0.6	GO:0045548	phenylalanine ammonia-lyase activity(GO:0045548)
0.1	0.5	GO:0047517	galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018) 1,4-beta-D-xylan synthase activity(GO:0047517)

Showing 1 to 3 of 3 entries

Results for AT5G44210

Z-value: 0.32

Transcription factors associated with AT5G44210

Activity-expression correlation:

Activity profile of AT5G44210 motif

Sorted Z-values of AT5G44210 motif

Top targets:

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G44210

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Gene overrepresentation in cellular component category:

Gene overrepresentation in molecular function category: