ISMARA results: AT5G25830

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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G25830

Z-value: 0.08

Transcription factors associated with AT5G25830

Gene Symbol	Gene ID	Gene Info
AT5G25830 TAIR	AT5G25830	GATA transcription factor 12

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
GATA12	arTal_v1_Chr5_-_9005941_9005941	0.86	5.1e-09	Click!

Activity profile of AT5G25830 motif

Sorted Z-values of AT5G25830 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
arTal_v1_Chr3_-_6421983_6422141 Show fit	0.17	AT3G18660.1 AT3G18660.3 AT3G18660.2	PGSIP1 TAIR Show fit	plant glycogenin-like starch initiation protein 1
arTal_v1_Chr1_+_27076020_27076020 Show fit	0.09	AT1G71930.1	VND7 TAIR Show fit	vascular related NAC-domain protein 7
arTal_v1_Chr1_+_27074702_27074702 Show fit	0.07	AT1G71930.2	VND7 TAIR Show fit	vascular related NAC-domain protein 7

Showing 1 to 3 of 3 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G25830

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0090059	protoxylem development(GO:0090059)
0.0	0.2	GO:0010417	glucuronoxylan metabolic process(GO:0010413) glucuronoxylan biosynthetic process(GO:0010417)

Showing 1 to 2 of 2 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.2	GO:0080116	glucuronoxylan glucuronosyltransferase activity(GO:0080116)

Showing 1 to 1 of 1 entries