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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G25810

Z-value: 1.10

Transcription factors associated with AT5G25810

Gene Symbol Gene ID Gene Info
AT5G25810
AT5G25810 Integrase-type DNA-binding superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
tnyarTal_v1_Chr5_-_8987898_8987898-0.281.5e-01Click!

Activity profile of AT5G25810 motif

Sorted Z-values of AT5G25810 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_+_5505360 7.68 AT3G16240.1
DELTA-TIP
delta tonoplast integral protein
Chr4_-_18098633 7.66 AT4G38770.1
PRP4
proline-rich protein 4
Chr4_-_7493080 6.14 AT4G12730.1
FLA2
FASCICLIN-like arabinogalactan 2
Chr2_-_18744322 6.05 AT2G45470.1
FLA8
FASCICLIN-like arabinogalactan protein 8
Chr5_+_8863224 5.76 AT5G25460.1
DGR2
transmembrane protein, putative (Protein of unknown function, DUF642)
Chr2_+_9844134 5.71 AT2G23130.1
AT2G23130.2
AGP17
arabinogalactan protein 17
Chr5_-_22560461 5.49 AT5G55730.2
AT5G55730.1
FLA1
FASCICLIN-like arabinogalactan 1
Chr2_+_8940833 5.23 AT2G20750.2
AT2G20750.1
EXPB1
expansin B1
Chr3_-_8589754 5.13 AT3G23810.1
SAHH2
S-adenosyl-l-homocysteine (SAH) hydrolase 2
Chr4_-_17606924 5.01 AT4G37450.1
AT4G37450.2
AGP18
arabinogalactan protein 18
Chr5_+_4087689 4.99 AT5G12940.1
AT5G12940
Leucine-rich repeat (LRR) family protein
Chr2_-_9062093 4.94 AT2G21140.1
PRP2
proline-rich protein 2
Chr2_-_9428170 4.88 AT2G22170.1
PLAT2
Lipase/lipooxygenase, PLAT/LH2 family protein
Chr5_+_26767599 4.74 AT5G67070.1
RALFL34
ralf-like 34
Chr3_+_23345754 4.73 AT3G63200.1
PLP9
PATATIN-like protein 9
Chr2_+_1676999 4.59 AT2G04780.2
FLA7
FASCICLIN-like arabinoogalactan 7
Chr1_-_21614169 4.52 AT1G58270.1
ZW9
TRAF-like family protein
Chr2_+_1676717 4.48 AT2G04780.1
FLA7
FASCICLIN-like arabinoogalactan 7
Chr1_-_3880391 4.38 AT1G11545.1
XTH8
xyloglucan endotransglucosylase/hydrolase 8
Chr3_-_2334185 4.36 AT3G07320.1
AT3G07320
O-Glycosyl hydrolases family 17 protein
Chr4_+_15401640 4.34 AT4G31840.1
ENODL15
early nodulin-like protein 15
Chr3_-_1136397 4.34 AT3G04290.1
LTL1
Li-tolerant lipase 1
Chr1_+_17918207 4.32 AT1G48480.1
RKL1
receptor-like kinase 1
Chr1_+_25401514 4.22 AT1G67750.1
AT1G67750
Pectate lyase family protein
Chr2_+_17592038 4.21 AT2G42220.1
AT2G42220
Rhodanese/Cell cycle control phosphatase superfamily protein
Chr3_-_4744263 4.06 AT3G14240.1
AT3G14240
Subtilase family protein
Chr2_-_15474717 4.04 AT2G36870.2
AT2G36870.1
XTH32
xyloglucan endotransglucosylase/hydrolase 32
Chr4_-_8307934 4.01 AT4G14440.1
HCD1
3-hydroxyacyl-CoA dehydratase 1
Chr2_+_15059763 3.97 AT2G35860.1
FLA16
FASCICLIN-like arabinogalactan protein 16 precursor
Chr1_-_28419635 3.94 AT1G75680.1
GH9B7
glycosyl hydrolase 9B7
Chr1_-_4530222 3.92 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
Chr1_+_29575806 3.90 AT1G78630.1
emb1473
Ribosomal protein L13 family protein
Chr5_-_990630 3.68 AT5G03760.1
ATCSLA09
Nucleotide-diphospho-sugar transferases superfamily protein
Chr1_-_26515188 3.65 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
Chr3_-_23328789 3.63 AT3G63140.1
CSP41A
chloroplast stem-loop binding protein of 41 kDa
Chr4_-_17181261 3.63 AT4G36360.2
BGAL3
beta-galactosidase 3
Chr4_-_17181466 3.60 AT4G36360.1
BGAL3
beta-galactosidase 3
Chr4_-_12772438 3.58 AT4G24780.1
AT4G24780.2
AT4G24780
Pectin lyase-like superfamily protein
Chr5_+_16468327 3.56 AT5G41140.1
AT5G41140.2
AT5G41140
Myosin heavy chain-related protein
Chr1_-_1307973 3.54 AT1G04680.1
AT1G04680
Pectin lyase-like superfamily protein
Chr5_+_2680401 3.54 AT5G08330.1
TCP11
TCP family transcription factor
Chr3_+_8586359 3.52 AT3G23805.1
RALFL24
ralf-like 24
Chr1_+_23911024 3.50 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
Chr1_-_28581315 3.50 AT1G76160.1
sks5
SKU5 similar 5
Chr1_-_15607966 3.48 AT1G41830.1
SKS6
SKU5-similar 6
Chr5_+_6670275 3.44 AT5G19730.1
AT5G19730
Pectin lyase-like superfamily protein
Chr1_-_24023424 3.42 AT1G64640.1
ENODL8
early nodulin-like protein 8
Chr5_+_19825078 3.42 AT5G48900.1
AT5G48900
Pectin lyase-like superfamily protein
Chr1_-_6319427 3.42 AT1G18360.1
AT1G18360
alpha/beta-Hydrolases superfamily protein
Chr5_+_15742543 3.41 AT5G39320.1
UDG4
UDP-glucose 6-dehydrogenase family protein
Chr1_-_3518035 3.41 AT1G10640.1
AT1G10640
Pectin lyase-like superfamily protein
Chr4_-_13958107 3.38 AT4G28080.1
AT4G28080
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_-_4265156 3.38 AT1G12500.1
AT1G12500
Nucleotide-sugar transporter family protein
Chr3_-_3108266 3.35 AT3G10080.1
AT3G10080.2
AT3G10080
RmlC-like cupins superfamily protein
Chr4_-_10278794 3.34 AT4G18670.1
AT4G18670
Leucine-rich repeat (LRR) family protein
Chr5_-_24990331 3.30 AT5G62220.1
GT18
glycosyltransferase 18
Chr4_-_16806830 3.29 AT4G35320.1
AT4G35320
hypothetical protein
Chr3_-_8902835 3.29 AT3G24480.1
AT3G24480
Leucine-rich repeat (LRR) family protein
Chr1_+_9259750 3.28 AT1G26770.2
EXPA10
expansin A10
Chr3_+_17949416 3.27 AT3G48460.1
AT3G48460
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_3530353 3.26 AT1G10657.4
AT1G10657.2
AT1G10657.3
AT1G10657.1
AT1G10657
transmembrane protein
Chr4_+_160643 3.24 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr4_+_17243583 3.21 AT4G36540.2
AT4G36540.1
BEE2
BR enhanced expression 2
Chr3_+_21076505 3.20 AT3G56940.1
AT3G56940.2
CRD1
dicarboxylate diiron protein, putative (Crd1)
Chr4_+_14304921 3.20 AT4G29020.2
AT4G29020.1
AT4G29020
glycine-rich protein
Chr1_+_9259432 3.19 AT1G26770.1
EXPA10
expansin A10
Chr4_-_7587099 3.19 AT4G12970.1
STOMAGEN
stomagen
Chr2_+_13647699 3.13 AT2G32100.1
OFP16
ovate family protein 16
Chr3_+_11252807 3.12 AT3G29320.1
PHS1
Glycosyl transferase, family 35
Chr2_+_18626188 3.10 AT2G45180.1
AT2G45180
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_+_15819489 3.08 AT4G32800.1
AT4G32800
Integrase-type DNA-binding superfamily protein
Chr2_+_10662190 3.06 AT2G25060.1
ENODL14
early nodulin-like protein 14
Chr1_-_8559066 3.06 AT1G24170.1
LGT9
Nucleotide-diphospho-sugar transferases superfamily protein
Chr4_-_17979740 3.05 AT4G38400.1
AT4G38401.1
EXLA2
AT4G38401
expansin-like A2
hypothetical protein
Chr1_-_1349478 3.04 AT1G04800.1
AT1G04800
glycine-rich protein
Chr3_+_6105908 2.99 AT3G17840.1
RLK902
receptor-like kinase 902
Chr2_-_5051613 2.99 AT2G12462.1
AT2G12462
sterile alpha motif (SAM) domain protein
Chr3_-_219104 2.91 AT3G01550.2
AT3G01550.1
PPT2
phosphoenolpyruvate (pep)/phosphate translocator 2
Chr4_-_13398307 2.89 AT4G26540.1
AT4G26540
Leucine-rich repeat receptor-like protein kinase family protein
Chr4_-_13496738 2.85 AT4G26830.1
AT4G26830.2
AT4G26830
O-Glycosyl hydrolases family 17 protein
Chr1_+_12188678 2.84 AT1G33610.1
AT1G33610
Leucine-rich repeat (LRR) family protein
Chr3_+_19417372 2.82 AT3G52370.2
AT3G52370.1
FLA15
FASCICLIN-like arabinogalactan protein 15 precursor
Chr1_-_18690503 2.81 AT1G50450.1
AT1G50450
Saccharopine dehydrogenase
Chr3_-_1855063 2.80 AT3G06130.2
AT3G06130.1
AT3G06130
Heavy metal transport/detoxification superfamily protein
Chr3_+_10505711 2.79 AT3G28180.1
CSLC04
Cellulose-synthase-like C4
Chr4_-_7545512 2.79 AT4G12880.1
ENODL19
early nodulin-like protein 19
Chr4_+_17986384 2.77 AT4G38430.1
ROPGEF1
rho guanyl-nucleotide exchange factor 1
Chr4_-_15312987 2.77 AT4G31590.1
CSLC5
Cellulose-synthase-like C5
Chr1_+_2047886 2.75 AT1G06680.2
PSBP-1
photosystem II subunit P-1
Chr1_+_2047634 2.75 AT1G06680.1
PSBP-1
photosystem II subunit P-1
Chr4_-_14002069 2.73 AT4G28250.2
AT4G28250.3
AT4G28250.4
AT4G28250.1
EXPB3
expansin B3
Chr3_+_3011780 2.73 AT3G09820.1
ADK1
adenosine kinase 1
Chr3_+_3012094 2.72 AT3G09820.2
ADK1
adenosine kinase 1
Chr1_-_8501542 2.72 AT1G24020.1
MLP423
MLP-like protein 423
Chr1_-_29643535 2.70 AT1G78850.1
AT1G78850
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Chr4_-_7545326 2.68 AT4G12880.2
ENODL19
early nodulin-like protein 19
Chr2_-_10304812 2.68 AT2G24230.1
AT2G24230
Leucine-rich repeat protein kinase family protein
Chr2_-_5675995 2.60 AT2G13610.1
ABCG5
ABC-2 type transporter family protein
Chr3_-_9255083 2.59 AT3G25500.1
AFH1
formin homology 1
Chr1_-_9458176 2.59 AT1G27210.1
AT1G27210
ARM repeat superfamily protein
Chr1_-_8502065 2.58 AT1G24020.2
MLP423
MLP-like protein 423
Chr3_-_1824309 2.56 AT3G06035.1
AT3G06035
Glycoprotein membrane precursor GPI-anchored
Chr1_-_1768837 2.55 AT1G05850.2
AT1G05850.1
POM1
Chitinase family protein
Chr3_-_6855513 2.55 AT3G19720.3
AT3G19720.2
AT3G19720.1
ARC5
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_+_22745514 2.54 AT3G61470.1
LHCA2
photosystem I light harvesting complex protein
Chr1_-_19101265 2.52 AT1G51500.1
ABCG12
ABC-2 type transporter family protein
Chr5_+_72292 2.52 AT5G01190.2
AT5G01190.1
LAC10
laccase 10
Chr5_-_16061043 2.52 AT5G40150.1
AT5G40150
Peroxidase superfamily protein
Chr3_-_427095 2.51 AT3G02250.1
AT3G02250
O-fucosyltransferase family protein
Chr2_-_17161293 2.51 AT2G41170.2
AT2G41170.1
AT2G41170.3
AT2G41170
F-box family protein
Chr3_-_18834834 2.50 AT3G50685.1
AT3G50685
anti-muellerian hormone type-2 receptor
Chr4_+_11907355 2.50 AT4G22620.1
AT4G22620
SAUR-like auxin-responsive protein family
Chr5_+_26061165 2.41 AT5G65220.1
AT5G65220
Ribosomal L29 family protein
Chr1_-_7040231 2.41 AT1G20330.1
SMT2
sterol methyltransferase 2
Chr5_-_26845294 2.40 AT5G67280.1
RLK
receptor-like kinase
Chr3_+_288741 2.39 AT3G01810.2
AT3G01810
EEIG1/EHBP1 protein amino-terminal domain protein
Chr3_+_288538 2.38 AT3G01810.3
AT3G01810
EEIG1/EHBP1 protein amino-terminal domain protein
Chr3_+_288158 2.35 AT3G01810.1
AT3G01810
EEIG1/EHBP1 protein amino-terminal domain protein
Chr4_+_12387631 2.32 AT4G23790.1
TBL24
TRICHOME BIREFRINGENCE-LIKE 24
Chr4_-_8454144 2.32 AT4G14740.4
AT4G14740.2
AT4G14740.1
AT4G14740
auxin canalization protein (DUF828)
Chr1_+_7680390 2.30 AT1G21880.2
AT1G21880.1
LYM1
lysm domain GPI-anchored protein 1 precursor
Chr3_+_22151164 2.29 AT3G59970.3
AT3G59970.2
AT3G59970.1
MTHFR1
methylenetetrahydrofolate reductase 1
Chr3_-_7434743 2.29 AT3G21190.1
MSR1
O-fucosyltransferase family protein
Chr1_-_3694200 2.26 AT1G11070.4
AT1G11070.2
AT1G11070.3
AT1G11070
hydroxyproline-rich glycoprotein family protein
Chr5_-_3728726 2.26 AT5G11590.1
TINY2
Integrase-type DNA-binding superfamily protein
Chr2_-_13864596 2.26 AT2G32690.2
AT2G32690.3
AT2G32690.5
AT2G32690.4
AT2G32690.1
GRP23
glycine-rich protein 23
Chr3_+_7280792 2.26 AT3G20820.1
AT3G20820
Leucine-rich repeat (LRR) family protein
Chr5_+_25191860 2.25 AT5G62720.2
AT5G62720
Integral membrane HPP family protein
Chr4_-_11785937 2.23 AT4G22290.1
AT4G22290
Ubiquitin-specific protease family C19-related protein
Chr5_+_25191402 2.23 AT5G62720.1
AT5G62720
Integral membrane HPP family protein
Chr5_+_25243405 2.23 AT5G62890.3
AT5G62890.1
AT5G62890
Xanthine/uracil permease family protein
Chr3_-_5777841 2.22 AT3G16920.1
CTL2
chitinase-like protein
Chr1_+_4735474 2.19 AT1G13820.1
AT1G13820
alpha/beta-Hydrolases superfamily protein
Chr5_+_17130186 2.18 AT5G42720.1
AT5G42720
Glycosyl hydrolase family 17 protein
Chr5_+_25243148 2.17 AT5G62890.2
AT5G62890.4
AT5G62890
Xanthine/uracil permease family protein
Chr2_-_16573519 2.17 AT2G39730.3
RCA
rubisco activase
Chr2_-_16573692 2.17 AT2G39730.1
AT2G39730.2
RCA
rubisco activase
Chr2_+_19109513 2.17 AT2G46535.1
AT2G46535
hypothetical protein
Chr5_+_26722701 2.15 AT5G66920.1
sks17
SKU5 similar 17
Chr1_-_30387602 2.15 AT1G80850.1
AT1G80850
DNA glycosylase superfamily protein
Chr4_-_11612903 2.14 AT4G21890.1
AT4G21890
zinc finger MYND domain protein
Chr5_+_26236964 2.13 AT5G65640.1
AT5G65640.2
bHLH093
beta HLH protein 93
Chr5_+_17697842 2.11 AT5G43990.4
AT5G43990.10
AT5G43990.7
AT5G43990.6
AT5G43990.1
AT5G43990.11
AT5G43990.9
AT5G43990.8
AT5G43990.17
AT5G43990.13
AT5G43990.12
AT5G43990.15
AT5G43990.16
AT5G43990.14
AT5G43990.3
AT5G43990.2
SUVR2
SET-domain containing protein lysine methyltransferase family protein
Chr2_+_10072057 2.10 AT2G23690.1
AT2G23690
HTH-type transcriptional regulator
Chr2_-_784880 2.08 AT2G02780.3
AT2G02780.1
AT2G02780.2
AT2G02780
Leucine-rich repeat protein kinase family protein
Chr2_-_15560755 2.08 AT2G37040.1
PAL1
PHE ammonia lyase 1
Chr3_-_5227935 2.07 AT3G15480.1
AT3G15480
fiber (DUF1218)
Chr5_+_2271890 2.06 AT5G07240.2
AT5G07240.1
IQD24
IQ-domain 24
Chr3_-_21805335 2.06 AT3G59010.1
PME61
pectin methylesterase 61
Chr1_+_195812 2.06 AT1G01540.1
AT1G01540
Protein kinase superfamily protein
Chr5_+_24667873 2.05 AT5G61350.1
AT5G61350
Protein kinase superfamily protein
Chr1_+_195645 2.05 AT1G01540.2
AT1G01540
Protein kinase superfamily protein
Chr3_-_5778052 2.05 AT3G16920.2
CTL2
chitinase-like protein
Chr1_-_3693572 2.05 AT1G11070.5
AT1G11070.1
AT1G11070
hydroxyproline-rich glycoprotein family protein
Chr5_-_16592381 2.04 AT5G41460.1
AT5G41460
transferring glycosyl group transferase (DUF604)
Chr3_-_5954091 2.04 AT3G17390.1
MTO3
S-adenosylmethionine synthetase family protein
Chr1_-_10326848 2.04 AT1G29530.1
AT1G29530
hypothetical protein
Chr3_+_20547661 2.03 AT3G55420.1
AT3G55420
hypothetical protein
Chr2_-_183639 2.01 AT2G01420.3
AT2G01420.1
AT2G01420.2
PIN4
Auxin efflux carrier family protein
Chr5_-_1145008 2.01 AT5G04160.1
AT5G04160
Nucleotide-sugar transporter family protein
Chr5_-_22515458 2.01 AT5G55570.2
AT5G55570.1
AT5G55570
transmembrane protein
Chr5_+_7168106 2.00 AT5G21100.1
AT5G21100
Plant L-ascorbate oxidase
Chr1_-_9024081 1.99 AT1G26100.1
AT1G26100
Cytochrome b561/ferric reductase transmembrane protein family
Chr1_-_18378634 1.99 AT1G49650.1
AT1G49650
alpha/beta-Hydrolases superfamily protein
Chr5_+_5935038 1.98 AT5G17920.1
AT5G17920.2
ATMS1
Cobalamin-independent synthase family protein
Chr5_-_17185032 1.97 AT5G42860.1
AT5G42860
late embryogenesis abundant protein, group 2
Chr3_+_22939388 1.97 AT3G61950.4
AT3G61950.3
AT3G61950.1
AT3G61950.5
AT3G61950
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr2_+_6518749 1.95 AT2G15050.3
AT2G15050.1
AT2G15050.2
LTP
lipid transfer protein
Chr2_+_8063023 1.95 AT2G18570.1
AT2G18570
UDP-Glycosyltransferase superfamily protein
Chr5_-_26842104 1.92 AT5G67270.1
EB1C
end binding protein 1C
Chr1_-_26293173 1.91 AT1G69830.1
AMY3
alpha-amylase-like 3
Chr3_-_9428277 1.91 AT3G25805.1
AT3G25805
transmembrane protein
Chr1_-_5366497 1.90 AT1G15580.1
IAA5
indole-3-acetic acid inducible 5
Chr3_-_18817405 1.90 AT3G50660.1
AT3G50660.2
DWF4
Cytochrome P450 superfamily protein
Chr5_-_1578690 1.88 AT5G05330.2
AT5G05330.3
AT5G05330.1
AT5G05330
HMG-box (high mobility group) DNA-binding family protein
Chr2_-_7130729 1.87 AT2G16440.1
MCM4
Minichromosome maintenance (MCM2/3/5) family protein
Chr4_-_8453179 1.87 AT4G14740.3
AT4G14740
auxin canalization protein (DUF828)
Chr1_+_19708011 1.84 AT1G52910.1
AT1G52910
fiber (DUF1218)
Chr5_-_24661241 1.84 AT5G61330.1
AT5G61330.2
AT5G61330
rRNA processing protein-like protein
Chr1_-_6860376 1.83 AT1G19835.1
AT1G19835.4
AT1G19835.6
AT1G19835.3
AT1G19835
filament-like protein (DUF869)
Chr1_+_26964087 1.83 AT1G71695.1
AT1G71695
Peroxidase superfamily protein
Chr2_+_8183638 1.82 AT2G18890.1
AT2G18890.3
AT2G18890
Protein kinase superfamily protein
Chr1_+_2696381 1.81 AT1G08520.1
ALB1
ALBINA 1
Chr3_-_1767620 1.81 AT3G05910.2
AT3G05910
Pectinacetylesterase family protein
Chr1_+_20061405 1.80 AT1G53730.2
AT1G53730.1
SRF6
STRUBBELIG-receptor family 6
Chr1_+_1198303 1.80 AT1G04430.3
AT1G04430.2
AT1G04430
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_-_1767843 1.80 AT3G05910.1
AT3G05910
Pectinacetylesterase family protein
Chr1_-_22382422 1.78 AT1G60790.1
TBL2
trichome birefringence-like protein (DUF828)
Chr5_+_26568572 1.78 AT5G66570.1
PSBO1
PS II oxygen-evolving complex 1
Chr1_+_10467956 1.78 AT1G29900.1
CARB
carbamoyl phosphate synthetase B
Chr1_+_28174187 1.78 AT1G75030.1
TLP-3
thaumatin-like protein 3
Chr5_-_18010542 1.76 AT5G44635.2
AT5G44635.1
MCM6
minichromosome maintenance (MCM2/3/5) family protein
Chr3_-_7776109 1.76 AT3G22070.1
AT3G22070
proline-rich family protein
Chr1_+_1197956 1.75 AT1G04430.1
AT1G04430
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_+_1160569 1.74 AT5G04230.1
AT5G04230.2
PAL3
phenyl alanine ammonia-lyase 3
Chr5_-_17635915 1.74 AT5G43870.1
AT5G43870.2
AT5G43870
auxin canalization protein (DUF828)
Chr1_-_2562316 1.73 AT1G08165.1
AT1G08165
hypothetical protein
Chr1_-_20357879 1.73 AT1G54500.1
AT1G54500
Rubredoxin-like superfamily protein
Chr4_+_18296388 1.72 AT4G39350.1
CESA2
cellulose synthase A2
Chr1_+_218834 1.72 AT1G01600.1
CYP86A4
cytochrome P450, family 86, subfamily A, polypeptide 4

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G25810

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
2.6 7.7 GO:0015840 urea transport(GO:0015840)
1.4 5.5 GO:0080094 response to trehalose-6-phosphate(GO:0080094)
1.3 5.1 GO:0033353 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
1.0 3.9 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.9 4.3 GO:0010226 response to lithium ion(GO:0010226)
0.9 3.4 GO:0006024 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.8 3.8 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.8 14.4 GO:0006949 syncytium formation(GO:0006949)
0.7 3.7 GO:0005980 glycogen catabolic process(GO:0005980)
0.7 2.9 GO:0015714 phosphoenolpyruvate transport(GO:0015714)
0.7 2.0 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.7 3.3 GO:0042549 photosystem II stabilization(GO:0042549)
0.6 3.8 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.6 9.5 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.5 3.6 GO:1902969 mitotic DNA replication(GO:1902969)
0.5 2.6 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.5 2.0 GO:0051574 positive regulation of histone H3-K9 methylation(GO:0051574)
0.5 2.3 GO:0019745 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.5 2.8 GO:0051098 regulation of binding(GO:0051098)
0.4 1.3 GO:0001738 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.4 1.3 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.4 2.6 GO:0097502 mannosylation(GO:0097502)
0.4 1.7 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.4 0.4 GO:0033478 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.4 1.2 GO:0046085 inosine catabolic process(GO:0006148) adenosine metabolic process(GO:0046085) inosine metabolic process(GO:0046102)
0.4 1.2 GO:0031506 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506) response to cobalt ion(GO:0032025)
0.4 5.0 GO:0009554 megasporogenesis(GO:0009554)
0.4 3.5 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.3 5.5 GO:0010315 auxin efflux(GO:0010315)
0.3 4.4 GO:0032544 plastid translation(GO:0032544)
0.3 1.0 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.3 2.6 GO:0006526 arginine biosynthetic process(GO:0006526)
0.3 2.9 GO:0010358 leaf shaping(GO:0010358)
0.3 4.2 GO:0010158 abaxial cell fate specification(GO:0010158)
0.3 1.6 GO:0045730 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.3 1.8 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.3 3.4 GO:0007143 female meiotic division(GO:0007143)
0.3 1.7 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.3 1.1 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.3 1.0 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.3 1.6 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.3 2.6 GO:0009957 epidermal cell fate specification(GO:0009957)
0.2 1.7 GO:0043446 cellular alkane metabolic process(GO:0043446)
0.2 2.4 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.2 2.1 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.2 4.4 GO:0009969 xyloglucan biosynthetic process(GO:0009969)
0.2 3.2 GO:0010052 guard cell differentiation(GO:0010052)
0.2 1.6 GO:0015909 long-chain fatty acid transport(GO:0015909)
0.2 6.8 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.2 2.6 GO:0016559 peroxisome fission(GO:0016559)
0.2 0.8 GO:0001578 microtubule bundle formation(GO:0001578)
0.2 1.2 GO:0051096 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.2 3.7 GO:0009086 methionine biosynthetic process(GO:0009086)
0.2 17.3 GO:0045490 pectin catabolic process(GO:0045490)
0.2 1.2 GO:0010581 regulation of starch biosynthetic process(GO:0010581)
0.2 0.7 GO:0071836 nectar secretion(GO:0071836)
0.2 1.6 GO:0009799 specification of symmetry(GO:0009799)
0.2 1.0 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.2 0.7 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.2 5.1 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.2 1.8 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.1 1.0 GO:0015689 molybdate ion transport(GO:0015689)
0.1 0.9 GO:0051754 meiotic sister chromatid cohesion, centromeric(GO:0051754)
0.1 1.6 GO:0071585 detoxification of cadmium ion(GO:0071585)
0.1 2.8 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.1 0.9 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.1 12.4 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.1 3.7 GO:0009292 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.1 1.5 GO:0050898 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.1 0.7 GO:0015939 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.1 0.4 GO:0010338 leaf formation(GO:0010338)
0.1 0.9 GO:0090057 root radial pattern formation(GO:0090057)
0.1 5.3 GO:0045489 pectin biosynthetic process(GO:0045489)
0.1 1.7 GO:0071329 cellular response to sucrose stimulus(GO:0071329)
0.1 0.6 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.1 2.0 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.1 0.8 GO:0031110 regulation of microtubule polymerization or depolymerization(GO:0031110)
0.1 1.1 GO:0052548 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.1 2.5 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.1 1.1 GO:0051446 positive regulation of meiotic cell cycle(GO:0051446)
0.1 0.5 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.1 7.7 GO:0009664 plant-type cell wall organization(GO:0009664)
0.1 1.1 GO:0009423 chorismate biosynthetic process(GO:0009423)
0.1 0.3 GO:0010028 xanthophyll cycle(GO:0010028)
0.1 2.7 GO:0043622 cortical microtubule organization(GO:0043622)
0.1 3.0 GO:0051225 spindle assembly(GO:0051225)
0.1 5.7 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.1 4.0 GO:0006635 fatty acid beta-oxidation(GO:0006635)
0.1 5.5 GO:0007267 cell-cell signaling(GO:0007267)
0.1 2.5 GO:0010025 wax biosynthetic process(GO:0010025)
0.1 2.8 GO:0051667 chloroplast relocation(GO:0009902) establishment of plastid localization(GO:0051667)
0.1 0.6 GO:0051785 positive regulation of mitotic nuclear division(GO:0045840) positive regulation of mitotic metaphase/anaphase transition(GO:0045842) positive regulation of nuclear division(GO:0051785) positive regulation of chromosome segregation(GO:0051984) positive regulation of mitotic sister chromatid separation(GO:1901970) positive regulation of metaphase/anaphase transition of cell cycle(GO:1902101)
0.1 1.1 GO:0010274 hydrotropism(GO:0010274)
0.1 0.6 GO:0080113 regulation of seed growth(GO:0080113)
0.1 0.5 GO:0048830 adventitious root development(GO:0048830)
0.1 1.7 GO:0006743 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.1 0.5 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.1 1.3 GO:0031425 chloroplast RNA processing(GO:0031425)
0.1 0.4 GO:0080117 secondary growth(GO:0080117)
0.1 1.9 GO:0032509 endosome transport via multivesicular body sorting pathway(GO:0032509)
0.1 1.0 GO:0000105 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.1 1.6 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.1 1.1 GO:0001934 positive regulation of protein phosphorylation(GO:0001934)
0.1 1.2 GO:0000373 Group II intron splicing(GO:0000373)
0.1 1.5 GO:0009832 plant-type cell wall biogenesis(GO:0009832)
0.1 0.3 GO:0007266 Rho protein signal transduction(GO:0007266)
0.1 1.0 GO:2000032 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.1 1.1 GO:0071218 cellular response to misfolded protein(GO:0071218)
0.1 0.8 GO:0048496 negative regulation of cell differentiation(GO:0045596) maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 1.5 GO:0030050 vesicle transport along actin filament(GO:0030050) actin filament-based transport(GO:0099515) vesicle cytoskeletal trafficking(GO:0099518)
0.1 0.2 GO:0042908 xenobiotic transport(GO:0042908)
0.0 1.4 GO:0010089 xylem development(GO:0010089)
0.0 1.7 GO:0010197 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.0 1.2 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 1.3 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.0 0.3 GO:0048209 regulation of vesicle targeting, to, from or within Golgi(GO:0048209)
0.0 2.1 GO:0016485 protein processing(GO:0016485)
0.0 0.2 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.0 1.0 GO:0006817 phosphate ion transport(GO:0006817)
0.0 0.2 GO:0007041 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.0 1.3 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 1.0 GO:0046834 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.0 4.3 GO:0080167 response to karrikin(GO:0080167)
0.0 1.7 GO:0046916 cellular transition metal ion homeostasis(GO:0046916)
0.0 0.2 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.0 1.9 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 3.2 GO:0019684 photosynthesis, light reaction(GO:0019684)
0.0 0.6 GO:0030488 tRNA methylation(GO:0030488)
0.0 1.0 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 0.1 GO:0015784 GDP-mannose transport(GO:0015784) purine nucleotide-sugar transmembrane transport(GO:0090480) GDP-mannose transmembrane transport(GO:1990570)
0.0 0.7 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0 0.1 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.0 0.4 GO:0019856 CTP biosynthetic process(GO:0006241) pyrimidine ribonucleoside triphosphate metabolic process(GO:0009208) pyrimidine ribonucleoside triphosphate biosynthetic process(GO:0009209) pyrimidine nucleobase biosynthetic process(GO:0019856) CTP metabolic process(GO:0046036)
0.0 0.4 GO:0010082 regulation of root meristem growth(GO:0010082)
0.0 0.2 GO:0006513 protein monoubiquitination(GO:0006513)
0.0 0.3 GO:0010230 alternative respiration(GO:0010230)
0.0 0.4 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.0 2.0 GO:0009630 gravitropism(GO:0009630)
0.0 1.2 GO:0009846 pollen germination(GO:0009846)
0.0 0.2 GO:0016554 cytidine to uridine editing(GO:0016554)
0.0 0.2 GO:0031333 negative regulation of protein complex assembly(GO:0031333)
0.0 1.4 GO:0009567 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.0 1.0 GO:0009911 positive regulation of flower development(GO:0009911)
0.0 1.3 GO:0009817 defense response to fungus, incompatible interaction(GO:0009817)
0.0 0.9 GO:0006289 nucleotide-excision repair(GO:0006289)
0.0 0.5 GO:0042147 retrograde transport, endosome to Golgi(GO:0042147)
0.0 0.9 GO:0009407 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 0.5 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.1 GO:0030656 regulation of vitamin metabolic process(GO:0030656) regulation of L-ascorbic acid biosynthetic process(GO:2000082)
0.0 0.2 GO:0051865 protein autoubiquitination(GO:0051865)
0.0 0.5 GO:0006284 base-excision repair(GO:0006284)
0.0 0.4 GO:0010099 regulation of photomorphogenesis(GO:0010099)
0.0 1.5 GO:0009101 protein glycosylation(GO:0006486) glycoprotein biosynthetic process(GO:0009101) macromolecule glycosylation(GO:0043413)
0.0 0.4 GO:0034754 cellular hormone metabolic process(GO:0034754)
0.0 1.0 GO:0043086 negative regulation of catalytic activity(GO:0043086)
0.0 0.1 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.0 1.0 GO:0017148 negative regulation of translation(GO:0017148) negative regulation of cellular amide metabolic process(GO:0034249)
0.0 0.4 GO:0051453 regulation of cellular pH(GO:0030641) regulation of intracellular pH(GO:0051453)
0.0 0.3 GO:0007093 mitotic cell cycle checkpoint(GO:0007093)
0.0 0.2 GO:0010227 floral organ abscission(GO:0010227)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 3.9 GO:1990752 microtubule end(GO:1990752)
0.5 1.4 GO:0016328 lateral plasma membrane(GO:0016328)
0.4 3.6 GO:0042555 MCM complex(GO:0042555)
0.4 1.8 GO:0010007 magnesium chelatase complex(GO:0010007)
0.3 7.3 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.3 3.1 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.3 1.6 GO:0009360 DNA polymerase III complex(GO:0009360)
0.3 0.8 GO:0009501 amyloplast(GO:0009501)
0.3 43.1 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.2 1.2 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.2 0.7 GO:0030896 checkpoint clamp complex(GO:0030896)
0.2 1.7 GO:0032153 cell division site(GO:0032153)
0.2 4.6 GO:0016324 apical plasma membrane(GO:0016324)
0.2 8.0 GO:0010319 stromule(GO:0010319)
0.2 4.6 GO:0055028 cortical microtubule(GO:0055028)
0.2 2.2 GO:0005880 nuclear microtubule(GO:0005880)
0.1 2.5 GO:0009522 photosystem I(GO:0009522)
0.1 1.9 GO:0000815 ESCRT III complex(GO:0000815)
0.1 27.9 GO:0009505 plant-type cell wall(GO:0009505)
0.1 0.9 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778) kinetochore microtubule(GO:0005828)
0.1 10.8 GO:0031225 anchored component of membrane(GO:0031225)
0.1 1.3 GO:0009986 cell surface(GO:0009986)
0.1 1.7 GO:0009508 plastid chromosome(GO:0009508)
0.1 11.0 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.1 27.2 GO:0030312 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.1 2.3 GO:0005680 anaphase-promoting complex(GO:0005680)
0.1 0.3 GO:0030130 clathrin coat of trans-Golgi network vesicle(GO:0030130) clathrin coat of coated pit(GO:0030132)
0.1 4.0 GO:0005797 Golgi medial cisterna(GO:0005797)
0.1 0.2 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.1 15.8 GO:0048046 apoplast(GO:0048046)
0.1 4.1 GO:0009707 chloroplast outer membrane(GO:0009707)
0.1 5.7 GO:0000138 Golgi trans cisterna(GO:0000138)
0.1 3.5 GO:0009706 chloroplast inner membrane(GO:0009706)
0.1 0.6 GO:0000178 exosome (RNase complex)(GO:0000178)
0.1 20.8 GO:0009579 thylakoid(GO:0009579)
0.1 0.7 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.0 0.7 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 1.6 GO:0005778 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.0 0.5 GO:0071782 endoplasmic reticulum tubular network(GO:0071782) endoplasmic reticulum subcompartment(GO:0098827)
0.0 2.7 GO:0005874 microtubule(GO:0005874)
0.0 6.8 GO:0005802 trans-Golgi network(GO:0005802)
0.0 0.2 GO:0030906 retromer, cargo-selective complex(GO:0030906)
0.0 70.5 GO:0005576 extracellular region(GO:0005576)
0.0 0.1 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.0 1.7 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 0.7 GO:0015934 large ribosomal subunit(GO:0015934)
0.0 0.2 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.0 5.1 GO:0005730 nucleolus(GO:0005730)
0.0 0.6 GO:0032040 small-subunit processome(GO:0032040)
0.0 0.3 GO:0000784 nuclear chromosome, telomeric region(GO:0000784)
0.0 0.3 GO:0000145 exocyst(GO:0000145)
0.0 0.5 GO:0010008 endosome membrane(GO:0010008)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.6 7.7 GO:0008519 ammonium transmembrane transporter activity(GO:0008519) urea transmembrane transporter activity(GO:0015204)
1.7 5.1 GO:0016802 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
1.3 2.6 GO:0019187 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
1.2 5.0 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
1.1 5.5 GO:0004001 adenosine kinase activity(GO:0004001)
1.0 4.0 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
1.0 2.9 GO:0051010 microtubule plus-end binding(GO:0051010)
1.0 3.8 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.9 3.7 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.8 3.8 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.7 3.4 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.6 1.8 GO:0010242 oxygen evolving activity(GO:0010242)
0.6 1.8 GO:1990518 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.6 2.3 GO:0042299 lupeol synthase activity(GO:0042299)
0.5 10.3 GO:0005199 structural constituent of cell wall(GO:0005199)
0.5 2.9 GO:0042879 phosphoglycerate transmembrane transporter activity(GO:0015120) aldonate transmembrane transporter activity(GO:0042879)
0.5 1.9 GO:0004556 alpha-amylase activity(GO:0004556)
0.5 1.9 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.5 11.9 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.5 0.9 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.4 3.8 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.4 11.1 GO:0008810 cellulase activity(GO:0008810)
0.4 1.2 GO:0004359 glutaminase activity(GO:0004359)
0.4 1.2 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.4 2.0 GO:0008705 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.4 1.6 GO:0015245 fatty acid transporter activity(GO:0015245)
0.4 1.1 GO:0005078 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.4 1.1 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.4 8.9 GO:0004565 beta-galactosidase activity(GO:0004565)
0.3 1.4 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.3 1.0 GO:0047150 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.3 1.3 GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.3 9.3 GO:0008266 poly(U) RNA binding(GO:0008266)
0.3 6.8 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.3 3.7 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.3 1.8 GO:0016851 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.3 1.2 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.3 5.7 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.3 1.4 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.3 1.1 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.3 10.7 GO:0016759 cellulose synthase activity(GO:0016759)
0.2 0.7 GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity(GO:0003864)
0.2 2.0 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.2 6.4 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.2 1.2 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.2 1.0 GO:0034511 U3 snoRNA binding(GO:0034511)
0.2 1.0 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.2 1.8 GO:0004096 catalase activity(GO:0004096)
0.2 2.1 GO:0003905 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.2 5.9 GO:0005179 hormone activity(GO:0005179)
0.2 1.2 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.2 2.4 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.2 2.3 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.2 5.0 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.1 1.0 GO:0015098 molybdate ion transmembrane transporter activity(GO:0015098)
0.1 0.3 GO:0005315 inorganic phosphate transmembrane transporter activity(GO:0005315)
0.1 4.8 GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor(GO:0016682)
0.1 2.8 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.1 0.7 GO:0004049 anthranilate synthase activity(GO:0004049)
0.1 1.7 GO:0046556 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.1 1.7 GO:0016774 phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.1 3.0 GO:0004568 chitinase activity(GO:0004568)
0.1 1.6 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 1.0 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
0.1 0.7 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.1 1.8 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.1 1.9 GO:0003688 DNA replication origin binding(GO:0003688)
0.1 0.8 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.1 1.5 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 2.5 GO:0016168 chlorophyll binding(GO:0016168)
0.1 0.8 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 0.3 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.1 0.4 GO:0016882 cyclo-ligase activity(GO:0016882)
0.1 1.1 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 3.3 GO:0045735 nutrient reservoir activity(GO:0045735)
0.1 1.7 GO:0060090 binding, bridging(GO:0060090)
0.1 0.5 GO:0032036 myosin tail binding(GO:0032029) myosin heavy chain binding(GO:0032036) myosin XI tail binding(GO:0080115)
0.1 9.3 GO:0009055 electron carrier activity(GO:0009055)
0.1 0.8 GO:1990939 ATP-dependent microtubule motor activity(GO:1990939)
0.1 0.9 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
0.1 8.7 GO:0008017 microtubule binding(GO:0008017)
0.1 0.6 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.1 2.4 GO:0018024 histone-lysine N-methyltransferase activity(GO:0018024)
0.1 2.1 GO:0004713 protein tyrosine kinase activity(GO:0004713)
0.1 1.0 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.1 1.0 GO:0070628 proteasome binding(GO:0070628)
0.1 0.7 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.1 4.3 GO:0030599 pectinesterase activity(GO:0030599)
0.1 6.2 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.1 1.5 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.1 2.3 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.6 GO:0008097 5S rRNA binding(GO:0008097)
0.0 0.8 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 10.3 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.5 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.0 0.6 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175)
0.0 2.1 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 1.0 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 0.6 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.0 1.8 GO:0102483 scopolin beta-glucosidase activity(GO:0102483)
0.0 0.1 GO:0005458 GDP-mannose transmembrane transporter activity(GO:0005458)
0.0 0.9 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.0 0.1 GO:0015930 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.0 0.6 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.0 0.1 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.5 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.0 1.3 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 3.2 GO:0008757 S-adenosylmethionine-dependent methyltransferase activity(GO:0008757)
0.0 0.3 GO:0097599 xylanase activity(GO:0097599)
0.0 0.2 GO:0008083 growth factor activity(GO:0008083)
0.0 0.6 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.3 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.0 0.7 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 2.4 GO:0032561 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)
0.0 0.4 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 1.2 GO:0003697 single-stranded DNA binding(GO:0003697)
0.0 0.7 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.3 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 2.7 GO:0043531 ADP binding(GO:0043531)
0.0 0.6 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.1 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.0 1.0 GO:0051020 GTPase binding(GO:0051020)
0.0 0.5 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.4 GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives(GO:0016857)
0.0 1.7 GO:0008514 organic anion transmembrane transporter activity(GO:0008514)
0.0 2.4 GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds(GO:0004553)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.7 PID AP1 PATHWAY AP-1 transcription factor network
0.3 1.6 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.2 1.9 PID CMYB PATHWAY C-MYB transcription factor network
0.1 0.6 PID DELTA NP63 PATHWAY Validated transcriptional targets of deltaNp63 isoforms
0.1 1.1 PID E2F PATHWAY E2F transcription factor network
0.1 0.8 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.1 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.5 1.6 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.5 3.6 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.4 2.6 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.4 1.6 REACTOME G1 S SPECIFIC TRANSCRIPTION Genes involved in G1/S-Specific Transcription
0.3 1.0 REACTOME PREFOLDIN MEDIATED TRANSFER OF SUBSTRATE TO CCT TRIC Genes involved in Prefoldin mediated transfer of substrate to CCT/TriC
0.3 0.8 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.2 0.6 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.0 0.4 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.2 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis