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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G23930

Z-value: 1.42

Transcription factors associated with AT5G23930

Gene Symbol Gene ID Gene Info
AT5G23930
AT5G23930 Mitochondrial transcription termination factor family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT5G23930arTal_v1_Chr5_-_8076193_80761930.154.5e-01Click!

Activity profile of AT5G23930 motif

Sorted Z-values of AT5G23930 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_-_17907638 4.56 AT5G44420.1
PDF1.2
plant defensin 1.2
Chr5_+_24608605 4.02 AT5G61160.1
AACT1
anthocyanin 5-aromatic acyltransferase 1
Chr5_-_17909507 3.88 AT5G44430.1
PDF1.2c
plant defensin 1.2C
Chr2_+_11089123 3.73 AT2G26020.1
PDF1.2b
plant defensin 1.2b
Chr1_+_5204312 3.15 AT1G15125.1
AT1G15125.2
AT1G15125
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_-_9201643 2.86 AT4G16260.2
AT4G16260.1
AT4G16260
Glycosyl hydrolase superfamily protein
Chr1_+_1882907 2.68 AT1G06160.1
ORA59
octadecanoid-responsive AP2/ERF 59
Chr1_+_28177670 2.62 AT1G75040.1
PR5
pathogenesis-related protein 5
Chr5_-_3402389 2.54 AT5G10760.1
AT5G10760
Eukaryotic aspartyl protease family protein
Chr2_+_1966806 2.44 AT2G05380.1
AT2G05380.2
GRP3S
glycine-rich protein 3 short isoform
Chr1_+_6927736 2.42 AT1G19960.1
AT1G19960
transcription factor
Chr2_+_16298110 2.37 AT2G39030.1
NATA1
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Chr2_-_18077517 2.29 AT2G43570.1
CHI
chitinase
Chr2_+_1966610 2.18 AT2G05380.3
GRP3S
glycine-rich protein 3 short isoform
Chr3_+_17268700 2.17 AT3G46900.1
COPT2
copper transporter 2
Chr5_+_3267635 2.12 AT5G10380.1
RING1
RING/U-box superfamily protein
Chr2_-_13862614 2.08 AT2G32680.1
RLP23
receptor like protein 23
Chr2_-_11295918 2.02 AT2G26560.1
PLA2A
phospholipase A 2A
Chr3_+_5243432 1.99 AT3G15510.1
NAC2
NAC domain containing protein 2
Chr5_+_22468579 1.99 AT5G55460.1
AT5G55460
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_30142697 1.93 AT1G80130.1
AT1G80130
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_+_2866222 1.91 AT5G09220.1
AAP2
amino acid permease 2
Chr1_-_3756998 1.90 AT1G11210.1
AT1G11210
cotton fiber protein, putative (DUF761)
Chr1_-_6805092 1.88 AT1G19670.1
CLH1
chlorophyllase 1
Chr3_+_5705541 1.86 AT3G16770.1
EBP
ethylene-responsive element binding protein
Chr5_+_7138762 1.84 AT5G21020.2
AT5G21020
transmembrane protein
Chr5_+_2938193 1.80 AT5G09440.1
EXL4
EXORDIUM like 4
Chr1_+_20876440 1.73 AT1G55850.1
CSLE1
cellulose synthase like E1
Chr4_+_10481619 1.70 AT4G19170.1
NCED4
nine-cis-epoxycarotenoid dioxygenase 4
Chr2_+_2026162 1.69 AT2G05520.4
AT2G05520.5
AT2G05520.6
AT2G05520.3
GRP-3
glycine-rich protein 3
Chr4_-_15903523 1.68 AT4G32940.1
GAMMA-VPE
gamma vacuolar processing enzyme
Chr1_+_7823066 1.67 AT1G22160.1
AT1G22160
senescence-associated family protein (DUF581)
Chr4_-_17289728 1.65 AT4G36670.1
PMT6
Major facilitator superfamily protein
Chr2_+_2025991 1.64 AT2G05520.2
AT2G05520.1
GRP-3
glycine-rich protein 3
Chr3_-_327412 1.63 AT3G01970.1
WRKY45
WRKY DNA-binding protein 45
Chr1_-_2175038 1.61 AT1G07090.1
LSH6
LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)
Chr2_-_10585216 1.60 AT2G24850.1
TAT3
tyrosine aminotransferase 3
Chr4_-_12890261 1.59 AT4G25110.2
AT4G25110.1
MC2
metacaspase 2
Chr2_+_17909007 1.58 AT2G43060.1
IBH1
ILI1 binding bHLH 1
Chr1_-_7388512 1.58 AT1G21100.1
IGMT1
O-methyltransferase family protein
Chr4_+_12414058 1.56 AT4G23870.1
AT4G23870
hypothetical protein
Chr5_-_14256284 1.55 AT5G36220.2
AT5G36220.1
CYP81D1
cytochrome p450 81d1
Chr5_-_2652535 1.55 AT5G08240.1
AT5G08240
transmembrane protein
Chr1_-_9956960 1.53 AT1G28370.1
AT1G28370.2
ERF11
ERF domain protein 11
Chr4_+_14348637 1.53 AT4G29110.1
AT4G29110
cotton fiber protein
Chr5_-_761840 1.53 AT5G03200.1
LUL1
RING/U-box superfamily protein
Chr2_+_17165191 1.52 AT2G41180.1
SIB2
VQ motif-containing protein
Chr1_-_5645443 1.49 AT1G16510.1
AT1G16510
SAUR-like auxin-responsive protein family
Chr2_-_19350650 1.47 AT2G47130.1
SDR3
NAD(P)-binding Rossmann-fold superfamily protein
Chr2_+_17409370 1.46 AT2G41730.1
AT2G41730
calcium-binding site protein
Chr4_-_13022996 1.45 AT4G25490.1
CBF1
C-repeat/DRE binding factor 1
Chr3_-_10790553 1.45 AT3G28740.1
CYP81D11
Cytochrome P450 superfamily protein
Chr5_-_17831336 1.44 AT5G44260.1
AT5G44260
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr5_+_18390942 1.44 AT5G45380.1
DUR3
urea-proton symporter DEGRADATION OF UREA 3 (DUR3)
Chr4_-_14820595 1.43 AT4G30270.1
XTH24
xyloglucan endotransglucosylase/hydrolase 24
Chr3_-_22907958 1.43 AT3G61880.1
AT3G61880.2
CYP78A9
cytochrome p450 78a9
Chr1_+_6100964 1.42 AT1G17745.1
AT1G17745.2
PGDH
D-3-phosphoglycerate dehydrogenase
Chr3_-_16926883 1.37 AT3G46090.1
ZAT7
C2H2 and C2HC zinc fingers superfamily protein
Chr1_+_29338530 1.37 AT1G78020.1
AT1G78020
senescence-associated family protein, putative (DUF581)
Chr1_-_13117235 1.36 AT1G35560.1
AT1G35560
TCP family transcription factor
Chr1_-_17706460 1.36 AT1G48000.1
MYB112
myb domain protein 112
Chr4_+_17440177 1.36 AT4G36990.1
HSF4
heat shock factor 4
Chr3_+_19431095 1.35 AT3G52430.1
PAD4
alpha/beta-Hydrolases superfamily protein
Chr3_+_19086344 1.34 AT3G51430.1
AT3G51430.2
YLS2
Calcium-dependent phosphotriesterase superfamily protein
Chr5_+_12558154 1.34 AT5G33290.1
XGD1
xylogalacturonan deficient 1
Chr4_+_17955110 1.33 AT4G38340.2
AT4G38340
Plant regulator RWP-RK family protein
Chr1_-_19690589 1.32 AT1G52880.1
NAM
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr5_-_3322910 1.32 AT5G10520.1
AT5G10520.2
RBK1
ROP binding protein kinases 1
Chr3_+_11527756 1.31 AT3G29670.1
PMAT2
HXXXD-type acyl-transferase family protein
Chr3_+_18634546 1.31 AT3G50260.1
CEJ1
cooperatively regulated by ethylene and jasmonate 1
Chr5_-_5862462 1.31 AT5G17760.2
AT5G17760.1
AT5G17760
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr2_-_17403050 1.30 AT2G41710.3
AT2G41710.2
AT2G41710.1
AT2G41710.4
AT2G41710
Integrase-type DNA-binding superfamily protein
Chr1_+_28740540 1.29 AT1G76590.1
AT1G76590
PLATZ transcription factor family protein
Chr1_-_6101983 1.27 AT1G17744.1
AT1G17744
hypothetical protein
Chr2_+_17507343 1.26 AT2G41940.1
ZFP8
zinc finger protein 8
Chr5_-_22312832 1.26 AT5G54960.1
PDC2
pyruvate decarboxylase-2
Chr4_+_17954710 1.26 AT4G38340.1
AT4G38340
Plant regulator RWP-RK family protein
Chr3_-_9646093 1.26 AT3G26320.1
CYP71B36
cytochrome P450, family 71, subfamily B, polypeptide 36
Chr1_-_29452417 1.25 AT1G78270.1
UGT85A4
UDP-glucosyl transferase 85A4
Chr4_+_13890472 1.25 AT4G27900.1
AT4G27900.2
AT4G27900
CCT motif family protein
Chr4_-_8870801 1.24 AT4G15530.7
AT4G15530.6
AT4G15530.5
AT4G15530.3
AT4G15530.4
AT4G15530.1
PPDK
pyruvate orthophosphate dikinase
Chr5_-_924728 1.23 AT5G03630.1
ATMDAR2
Pyridine nucleotide-disulfide oxidoreductase family protein
Chr1_-_156178 1.23 AT1G01420.2
UGT72B3
UDP-glucosyl transferase 72B3
Chr5_-_19977620 1.23 AT5G49280.1
AT5G49280
hydroxyproline-rich glycoprotein family protein
Chr2_-_14310608 1.23 AT2G33830.2
AT2G33830
Dormancy/auxin associated family protein
Chr5_+_6017797 1.23 AT5G18210.1
AT5G18210.2
AT5G18210
NAD(P)-binding Rossmann-fold superfamily protein
Chr1_-_156011 1.23 AT1G01420.1
UGT72B3
UDP-glucosyl transferase 72B3
Chr2_-_14310339 1.21 AT2G33830.1
AT2G33830
Dormancy/auxin associated family protein
Chr3_+_4544364 1.21 AT3G13810.5
AT3G13810.3
AT3G13810.4
AT3G13810.6
AT3G13810.2
AT3G13810.1
IDD11
indeterminate(ID)-domain 11
Chr5_+_3239617 1.21 AT5G10300.2
MES5
methyl esterase 5
Chr3_-_1776840 1.20 AT3G05937.1
AT3G05937
hypothetical protein
Chr1_-_17266724 1.18 AT1G46768.3
AT1G46768.2
AT1G46768.1
RAP2.1
related to AP2 1
Chr1_-_3323735 1.18 AT1G10140.1
AT1G10140
Uncharacterized conserved protein UCP031279
Chr3_-_7993588 1.18 AT3G22550.1
AT3G22550
NAD(P)H-quinone oxidoreductase subunit, putative (DUF581)
Chr5_+_20891163 1.18 AT5G51440.1
AT5G51440
HSP20-like chaperones superfamily protein
Chr5_+_3239455 1.17 AT5G10300.1
MES5
methyl esterase 5
Chr5_+_16815310 1.16 AT5G42050.1
AT5G42050
DCD (Development and Cell Death) domain protein
Chr4_-_12170055 1.15 AT4G23260.1
AT4G23260.2
CRK18
cysteine-rich RLK (RECEPTOR-like protein kinase) 18
Chr1_-_20017932 1.13 AT1G53633.1
AT1G53633
hypothetical protein
Chr4_+_9449114 1.12 AT4G16780.1
HB-2
homeobox protein 2
Chr5_-_8659352 1.11 AT5G25110.1
CIPK25
CBL-interacting protein kinase 25
Chr1_+_4794664 1.10 AT1G13990.1
AT1G13990.2
AT1G13990.3
AT1G13990
plant/protein
Chr3_+_5341356 1.09 AT3G15780.1
AT3G15780
transmembrane protein
Chr2_+_15110492 1.08 AT2G35980.1
YLS9
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr3_-_4591483 1.08 AT3G13910.2
AT3G13910.1
AT3G13910
hypothetical protein (DUF3511)
Chr5_+_17806397 1.07 AT5G44210.1
ERF9
erf domain protein 9
Chr1_+_29759030 1.07 AT1G79110.2
AT1G79110.3
AT1G79110.1
BRG2
zinc ion binding protein
Chr2_-_14211693 1.06 AT2G33550.1
AT2G33550
Homeodomain-like superfamily protein
Chr3_-_4775258 1.06 AT3G14310.1
PME3
pectin methylesterase 3
Chr5_-_7377667 1.06 AT5G22290.2
AT5G22290.1
NAC089
NAC domain containing protein 89
Chr3_-_2699257 1.06 AT3G08860.2
PYD4
PYRIMIDINE 4
Chr1_+_933426 1.05 AT1G03740.2
AT1G03740.1
AT1G03740
Protein kinase superfamily protein
Chr2_-_15273115 1.05 AT2G36400.1
GRF3
growth-regulating factor 3
Chr2_+_10906460 1.05 AT2G25625.2
AT2G25625
histone deacetylase-like protein
Chr2_-_10737800 1.04 AT2G25200.1
AT2G25200
hypothetical protein (DUF868)
Chr3_-_18375784 1.04 AT3G49580.3
AT3G49580.2
LSU1
response to low sulfur 1
Chr5_+_4206738 1.03 AT5G13200.2
AT5G13200.1
AT5G13200
GRAM domain family protein
Chr4_-_16659486 1.03 AT4G34980.1
SLP2
subtilisin-like serine protease 2
Chr5_+_6423153 1.03 AT5G19140.2
AT5G19140.1
AILP1
aluminum induced protein with YGL and LRDR motifs
Chr3_+_17558793 1.02 AT3G47620.1
TCP14
TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14
Chr4_-_8869319 1.02 AT4G15530.2
PPDK
pyruvate orthophosphate dikinase
Chr2_-_11685342 1.01 AT2G27310.1
AT2G27310
F-box family protein
Chr1_-_24362054 1.01 AT1G65520.1
ECI1
delta(3), delta(2)-enoyl CoA isomerase 1
Chr2_+_15192480 1.01 AT2G36220.1
AT2G36220
hypothetical protein
Chr3_-_2699420 1.01 AT3G08860.1
PYD4
PYRIMIDINE 4
Chr3_+_10061009 1.01 AT3G27250.1
AT3G27250.2
AT3G27250
hypothetical protein
Chr1_-_23818481 1.01 AT1G64170.1
CHX16
cation/H+ exchanger 16
Chr1_+_8164959 1.00 AT1G23040.3
AT1G23040.2
AT1G23040
hydroxyproline-rich glycoprotein family protein
Chr1_+_24113109 1.00 AT1G64900.1
CYP89A2
cytochrome P450, family 89, subfamily A, polypeptide 2
Chr3_-_20436453 0.99 AT3G55130.1
ABCG19
white-brown complex homolog 19
Chr4_+_14400920 0.99 AT4G29210.2
AT4G29210.1
GGT4
gamma-glutamyl transpeptidase 4
Chr3_+_8172479 0.99 AT3G23000.1
CIPK7
CBL-interacting protein kinase 7
Chr4_-_8464485 0.99 AT4G14746.1
AT4G14746.2
AT4G14746
neurogenic locus notch-like protein
Chr5_-_7385833 0.99 AT5G22310.1
AT5G22310
trichohyalin-like protein
Chr4_+_18530318 0.99 AT4G39955.1
AT4G39955
alpha/beta-Hydrolases superfamily protein
Chr5_+_6424779 0.99 AT5G19140.3
AILP1
aluminum induced protein with YGL and LRDR motifs
Chr3_+_2288732 0.99 AT3G07195.1
AT3G07195.2
AT3G07195
RPM1-interacting protein 4 (RIN4) family protein
Chr5_+_22980638 0.99 AT5G56840.1
AT5G56840
myb-like transcription factor family protein
Chr5_-_25764420 0.98 AT5G64430.1
AT5G64430
Octicosapeptide/Phox/Bem1p family protein
Chr1_-_30157808 0.98 AT1G80180.1
AT1G80180
hypothetical protein
Chr3_-_11259055 0.98 AT3G29330.1
AT3G29330.2
AT3G29330
zinc finger RNA-binding-like protein
Chr2_+_17945662 0.97 AT2G43150.1
AT2G43150
Proline-rich extensin-like family protein
Chr4_-_8095749 0.97 AT4G14020.1
AT4G14020
Rapid alkalinization factor (RALF) family protein
Chr2_+_13141290 0.97 AT2G30870.1
GSTF10
glutathione S-transferase PHI 10
Chr1_+_27107558 0.96 AT1G72010.1
AT1G72010
TCP family transcription factor
Chr2_-_13549571 0.96 AT2G31865.3
AT2G31865.1
AT2G31865.2
PARG2
poly(ADP-ribose) glycohydrolase 2
Chr3_+_4908731 0.96 AT3G14595.1
AT3G14595
Ribosomal protein L18ae family
Chr1_-_24062804 0.96 AT1G64780.1
AMT1%3B2
ammonium transporter 1;2
Chr5_-_7496990 0.95 AT5G22570.1
WRKY38
WRKY DNA-binding protein 38
Chr1_-_11595982 0.95 AT1G32190.2
AT1G32190.1
AT1G32190
alpha/beta-Hydrolases superfamily protein
Chr2_-_9538963 0.95 AT2G22470.1
AGP2
arabinogalactan protein 2
Chr2_-_16235234 0.95 AT2G38860.3
AT2G38860.1
AT2G38860.2
YLS5
Class I glutamine amidotransferase-like superfamily protein
Chr1_-_25446952 0.94 AT1G67865.1
AT1G67865
hypothetical protein
Chr1_+_2672198 0.94 AT1G08460.1
AT1G08460.2
HDA08
histone deacetylase 8
Chr2_+_10906215 0.94 AT2G25625.1
AT2G25625
histone deacetylase-like protein
Chr5_-_24317935 0.94 AT5G60460.2
AT5G60460
Preprotein translocase Sec, Sec61-beta subunit protein
Chr1_-_25447622 0.94 AT1G67865.2
AT1G67865
hypothetical protein
Chr5_+_19397041 0.93 AT5G47910.1
RBOHD
respiratory burst oxidase homologue D
Chr2_-_13613573 0.93 AT2G31990.1
AT2G31990.3
AT2G31990.2
AT2G31990
Exostosin family protein
Chr2_+_18108289 0.93 AT2G43680.4
AT2G43680.2
AT2G43680.5
AT2G43680.3
IQD14
IQ-domain 14
Chr1_+_26038905 0.93 AT1G69260.1
AFP1
ABI five binding protein
Chr1_+_8164782 0.93 AT1G23040.1
AT1G23040
hydroxyproline-rich glycoprotein family protein
Chr1_+_4915491 0.93 AT1G14370.1
APK2A
protein kinase 2A
Chr5_-_7826611 0.93 AT5G23230.1
NIC2
nicotinamidase 2
Chr1_-_27755297 0.93 AT1G73810.1
AT1G73810
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Chr2_+_19641351 0.93 AT2G48010.1
RKF3
receptor-like kinase in in flowers 3
Chr4_+_7239200 0.93 AT4G12080.1
AHL1
AT-hook motif nuclear-localized protein 1
Chr4_+_9028262 0.93 AT4G15910.1
DI21
drought-induced 21
Chr3_-_21798303 0.92 AT3G58990.1
IPMI1
isopropylmalate isomerase 1
Chr5_+_8752684 0.92 AT5G25260.1
AT5G25260
SPFH/Band 7/PHB domain-containing membrane-associated protein family
Chr2_-_11980003 0.91 AT2G28110.1
FRA8
Exostosin family protein
Chr1_-_7469995 0.91 AT1G21326.1
AT1G21326
VQ motif-containing protein
Chr1_+_26226731 0.91 AT1G69720.1
AT1G69720.2
HO3
heme oxygenase 3
Chr4_-_13417145 0.91 AT4G26590.1
OPT5
oligopeptide transporter 5
Chr3_+_10023931 0.91 AT3G27170.1
CLC-B
chloride channel B
Chr1_-_7900335 0.90 AT1G22370.1
AT1G22370.2
UGT85A5
UDP-glucosyl transferase 85A5
Chr5_+_22725238 0.90 AT5G56140.1
AT5G56140
RNA-binding KH domain-containing protein
Chr4_+_9669345 0.90 AT4G17245.1
AT4G17245
RING/U-box superfamily protein
Chr3_-_23411988 0.90 AT3G63390.1
AT3G63390
hypothetical protein
Chr1_-_5338326 0.90 AT1G15520.1
AT1G15520.2
ABCG40
pleiotropic drug resistance 12
Chr5_+_17451488 0.90 AT5G43420.1
AT5G43420
RING/U-box superfamily protein
Chr3_+_8488695 0.89 AT3G23630.1
IPT7
isopentenyltransferase 7
Chr2_-_12499723 0.89 AT2G29090.1
AT2G29090.2
AT2G29090.4
CYP707A2
cytochrome P450, family 707, subfamily A, polypeptide 2
Chr2_+_18108119 0.89 AT2G43680.1
IQD14
IQ-domain 14
Chr2_-_14568799 0.89 AT2G34585.1
AT2G34585
transmembrane protein
Chr1_+_8549191 0.88 AT1G24150.2
AT1G24150.1
FH4
formin homologue 4
Chr2_-_17098731 0.88 AT2G40970.1
MYBC1
Homeodomain-like superfamily protein
Chr5_-_5367612 0.88 AT5G16410.1
AT5G16410
HXXXD-type acyl-transferase family protein
Chr1_+_25926849 0.88 AT1G68945.1
AT1G68945
hypothetical protein
Chr5_-_24318241 0.88 AT5G60460.1
AT5G60460
Preprotein translocase Sec, Sec61-beta subunit protein
Chr3_-_10941833 0.88 AT3G28920.1
HB34
homeobox protein 34
Chr3_+_3186266 0.88 AT3G10300.3
AT3G10300.2
AT3G10300.1
AT3G10300.5
AT3G10300.4
AT3G10300
Calcium-binding EF-hand family protein
Chr3_+_8152038 0.88 AT3G22970.2
AT3G22970.1
AT3G22970
hypothetical protein (DUF506)
Chr1_+_18138169 0.87 AT1G49032.2
AT1G49032
hypothetical protein
Chr2_-_9354645 0.87 AT2G21950.1
SKIP6
SKP1 interacting partner 6
Chr1_-_12516521 0.87 AT1G34315.1
AT1G34315
transmembrane protein
Chr1_-_19822399 0.87 AT1G53170.1
ERF8
ethylene response factor 8
Chr3_-_16558169 0.86 AT3G45210.1
AT3G45210
transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)
Chr5_+_17798262 0.86 AT5G44190.2
AT5G44190.1
GLK2
GOLDEN2-like 2
Chr5_-_2079005 0.86 AT5G06720.1
PA2
peroxidase 2

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G23930

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 3.7 GO:0002215 defense response to nematode(GO:0002215)
0.7 2.8 GO:0010272 response to silver ion(GO:0010272)
0.7 2.1 GO:0032491 detection of molecule of fungal origin(GO:0032491)
0.6 2.4 GO:0016139 glycoside catabolic process(GO:0016139)
0.5 2.2 GO:0048838 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438)
0.4 1.6 GO:0061062 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.4 4.3 GO:0010044 response to aluminum ion(GO:0010044)
0.3 1.3 GO:0010618 aerenchyma formation(GO:0010618)
0.3 0.7 GO:0010113 negative regulation of systemic acquired resistance(GO:0010113)
0.3 7.2 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.3 2.3 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.3 1.6 GO:0006788 heme oxidation(GO:0006788)
0.3 1.9 GO:0006624 vacuolar protein processing(GO:0006624)
0.3 1.5 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.3 2.4 GO:0006591 ornithine metabolic process(GO:0006591)
0.3 1.5 GO:0006564 L-serine biosynthetic process(GO:0006564)
0.3 0.8 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.3 1.8 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.3 3.3 GO:0048317 seed morphogenesis(GO:0048317)
0.3 0.3 GO:2001022 positive regulation of response to DNA damage stimulus(GO:2001022)
0.2 1.7 GO:0015800 acidic amino acid transport(GO:0015800)
0.2 0.9 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.2 0.6 GO:0060776 simple leaf morphogenesis(GO:0060776)
0.2 0.8 GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress(GO:0043618)
0.2 0.4 GO:0009663 plasmodesma organization(GO:0009663)
0.2 1.0 GO:0071277 cellular response to calcium ion(GO:0071277)
0.2 0.8 GO:0048656 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.2 1.0 GO:0071466 xenobiotic metabolic process(GO:0006805) cellular response to xenobiotic stimulus(GO:0071466)
0.2 0.8 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.2 0.6 GO:0009727 detection of ethylene stimulus(GO:0009727)
0.2 0.8 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.2 0.4 GO:0009726 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.2 0.6 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.2 1.1 GO:0080190 lateral growth(GO:0080190)
0.2 0.6 GO:0017145 stem cell division(GO:0017145)
0.2 0.7 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.2 1.6 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.2 0.9 GO:0034763 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.2 0.5 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.2 1.2 GO:0010148 transpiration(GO:0010148)
0.2 1.4 GO:0009061 anaerobic respiration(GO:0009061)
0.2 1.4 GO:0080142 regulation of salicylic acid biosynthetic process(GO:0080142)
0.2 0.9 GO:0019323 pentose catabolic process(GO:0019323)
0.2 0.8 GO:0000729 meiotic DNA double-strand break processing(GO:0000706) DNA double-strand break processing(GO:0000729)
0.2 0.2 GO:1901881 positive regulation of protein depolymerization(GO:1901881)
0.2 1.0 GO:0042754 negative regulation of circadian rhythm(GO:0042754)
0.2 0.8 GO:1902065 response to L-glutamate(GO:1902065)
0.2 0.8 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.2 3.0 GO:0033015 porphyrin-containing compound catabolic process(GO:0006787) chlorophyll catabolic process(GO:0015996) tetrapyrrole catabolic process(GO:0033015) pigment catabolic process(GO:0046149)
0.2 0.8 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.2 4.4 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.2 0.7 GO:0045332 phospholipid translocation(GO:0045332)
0.2 0.8 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.2 1.1 GO:0030007 cellular potassium ion homeostasis(GO:0030007)
0.2 2.8 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.2 2.2 GO:0051865 protein autoubiquitination(GO:0051865)
0.2 0.9 GO:0008614 pyridoxine metabolic process(GO:0008614)
0.2 1.5 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.2 2.0 GO:0010100 negative regulation of photomorphogenesis(GO:0010100)
0.1 0.6 GO:0015739 sialic acid transport(GO:0015739)
0.1 3.1 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.1 0.4 GO:0015717 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.1 0.4 GO:0010507 negative regulation of autophagy(GO:0010507)
0.1 0.7 GO:0080009 mRNA methylation(GO:0080009)
0.1 0.6 GO:0071323 cellular response to chitin(GO:0071323)
0.1 0.4 GO:0015696 ammonium transport(GO:0015696)
0.1 1.3 GO:0071249 cellular response to nitrate(GO:0071249)
0.1 1.9 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.1 0.4 GO:2000072 regulation of defense response to fungus, incompatible interaction(GO:2000072)
0.1 0.4 GO:0072337 modified amino acid transport(GO:0072337)
0.1 1.1 GO:0017006 protein-tetrapyrrole linkage(GO:0017006)
0.1 0.7 GO:0016444 somatic cell DNA recombination(GO:0016444)
0.1 1.1 GO:0006183 GTP biosynthetic process(GO:0006183)
0.1 0.5 GO:0015692 lead ion transport(GO:0015692)
0.1 0.5 GO:0010351 lithium ion transport(GO:0010351)
0.1 2.1 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.1 0.6 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.1 1.2 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.1 1.3 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.1 0.4 GO:0035246 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.1 0.2 GO:0050687 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.1 0.5 GO:0000187 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.1 0.4 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.1 0.6 GO:1901535 regulation of DNA demethylation(GO:1901535)
0.1 5.6 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.1 0.6 GO:0010255 glucose mediated signaling pathway(GO:0010255)
0.1 1.5 GO:0010262 somatic embryogenesis(GO:0010262)
0.1 0.5 GO:0019499 cyanide metabolic process(GO:0019499)
0.1 0.6 GO:0035627 ceramide transport(GO:0035627)
0.1 1.5 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.1 0.3 GO:0055047 generative cell mitosis(GO:0055047)
0.1 0.3 GO:0033530 raffinose metabolic process(GO:0033530)
0.1 0.4 GO:0018315 molybdenum incorporation into molybdenum-molybdopterin complex(GO:0018315) metal incorporation into metallo-molybdopterin complex(GO:0042040)
0.1 8.4 GO:0071369 cellular response to ethylene stimulus(GO:0071369)
0.1 1.2 GO:0016554 cytidine to uridine editing(GO:0016554)
0.1 0.7 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.1 1.7 GO:0009641 shade avoidance(GO:0009641)
0.1 4.2 GO:0006635 fatty acid beta-oxidation(GO:0006635)
0.1 0.9 GO:0034063 stress granule assembly(GO:0034063)
0.1 0.1 GO:0090058 metaxylem development(GO:0090058)
0.1 1.1 GO:0080113 regulation of seed growth(GO:0080113)
0.1 0.8 GO:0032351 negative regulation of hormone metabolic process(GO:0032351)
0.1 0.2 GO:0034486 vacuolar transmembrane transport(GO:0034486)
0.1 0.3 GO:0072702 response to methyl methanesulfonate(GO:0072702)
0.1 0.3 GO:0046416 D-amino acid metabolic process(GO:0046416)
0.1 0.6 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.1 0.3 GO:0006557 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.1 1.8 GO:0031540 regulation of anthocyanin biosynthetic process(GO:0031540)
0.1 0.6 GO:1903428 positive regulation of reactive oxygen species biosynthetic process(GO:1903428)
0.1 0.3 GO:0071452 cellular response to singlet oxygen(GO:0071452)
0.1 0.3 GO:0006369 termination of RNA polymerase II transcription(GO:0006369)
0.1 2.2 GO:0030968 endoplasmic reticulum unfolded protein response(GO:0030968)
0.1 0.5 GO:0006307 DNA dealkylation involved in DNA repair(GO:0006307)
0.1 2.2 GO:0045926 negative regulation of growth(GO:0045926)
0.1 1.2 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.1 0.7 GO:0015914 phospholipid transport(GO:0015914)
0.1 1.3 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.1 1.5 GO:0000266 mitochondrial fission(GO:0000266)
0.1 0.7 GO:0030149 sphingolipid catabolic process(GO:0030149)
0.1 0.3 GO:0080051 cutin transport(GO:0080051)
0.1 0.3 GO:0034367 DNA-templated transcriptional open complex formation(GO:0001112) transcriptional open complex formation at RNA polymerase II promoter(GO:0001113) protein-DNA complex remodeling(GO:0001120) macromolecular complex remodeling(GO:0034367)
0.1 0.3 GO:0010599 production of lsiRNA involved in RNA interference(GO:0010599)
0.1 0.3 GO:0034720 histone H3-K4 demethylation(GO:0034720)
0.1 0.5 GO:2000068 regulation of defense response to insect(GO:2000068)
0.1 0.2 GO:0090392 sepal giant cell differentiation(GO:0090392)
0.1 0.3 GO:0033306 phytol metabolic process(GO:0033306)
0.1 0.7 GO:0010230 alternative respiration(GO:0010230)
0.1 3.7 GO:0009626 plant-type hypersensitive response(GO:0009626)
0.1 0.3 GO:0015697 quaternary ammonium group transport(GO:0015697)
0.1 0.5 GO:0022610 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.1 0.6 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.1 2.1 GO:0042631 cellular response to water deprivation(GO:0042631)
0.1 0.5 GO:0031086 nuclear-transcribed mRNA catabolic process, deadenylation-independent decay(GO:0031086) deadenylation-independent decapping of nuclear-transcribed mRNA(GO:0031087)
0.1 2.0 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.1 0.3 GO:0051196 regulation of coenzyme metabolic process(GO:0051196)
0.1 0.2 GO:0080001 mucilage extrusion from seed coat(GO:0080001)
0.1 0.2 GO:0034476 U1 snRNA 3'-end processing(GO:0034473) U5 snRNA 3'-end processing(GO:0034476) nuclear polyadenylation-dependent mRNA catabolic process(GO:0071042) polyadenylation-dependent mRNA catabolic process(GO:0071047)
0.1 0.5 GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic(GO:0090502)
0.1 0.4 GO:0045898 regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045898) positive regulation of RNA polymerase II transcriptional preinitiation complex assembly(GO:0045899)
0.1 1.0 GO:0071027 nuclear RNA surveillance(GO:0071027)
0.1 0.2 GO:0061641 CENP-A containing nucleosome assembly(GO:0034080) CENP-A containing chromatin organization(GO:0061641)
0.1 0.3 GO:0046622 positive regulation of organ growth(GO:0046622)
0.1 0.9 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.1 0.2 GO:0034551 respiratory chain complex III assembly(GO:0017062) mitochondrial respiratory chain complex III assembly(GO:0034551) mitochondrial respiratory chain complex III biogenesis(GO:0097033)
0.1 0.5 GO:0070370 cellular heat acclimation(GO:0070370)
0.1 1.1 GO:0072506 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.1 0.3 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.1 0.6 GO:0009229 thiamine diphosphate biosynthetic process(GO:0009229) thiamine diphosphate metabolic process(GO:0042357)
0.1 0.3 GO:0080029 cellular response to boron-containing substance levels(GO:0080029)
0.1 0.5 GO:1901527 abscisic acid-activated signaling pathway involved in stomatal movement(GO:1901527)
0.1 0.3 GO:0043461 proton-transporting ATP synthase complex assembly(GO:0043461) proton-transporting ATP synthase complex biogenesis(GO:0070272)
0.1 0.3 GO:0019419 sulfate reduction(GO:0019419)
0.1 0.2 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.1 0.3 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.1 0.3 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.1 1.7 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.1 0.5 GO:0033962 cytoplasmic mRNA processing body assembly(GO:0033962)
0.1 1.2 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.1 0.5 GO:0097428 protein maturation by iron-sulfur cluster transfer(GO:0097428)
0.1 0.2 GO:0010288 response to lead ion(GO:0010288)
0.1 0.2 GO:0050685 positive regulation of RNA splicing(GO:0033120) positive regulation of mRNA processing(GO:0050685) positive regulation of mRNA metabolic process(GO:1903313)
0.1 0.7 GO:1900426 positive regulation of defense response to bacterium(GO:1900426)
0.1 0.4 GO:0043486 histone exchange(GO:0043486)
0.1 0.4 GO:0034311 sphingosine metabolic process(GO:0006670) diol metabolic process(GO:0034311) diol biosynthetic process(GO:0034312) sphingosine biosynthetic process(GO:0046512)
0.1 1.6 GO:0009082 branched-chain amino acid biosynthetic process(GO:0009082)
0.1 0.4 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.1 0.8 GO:0006621 protein retention in ER lumen(GO:0006621)
0.1 1.5 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.1 0.2 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.1 0.2 GO:0046440 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.1 0.8 GO:0050821 protein stabilization(GO:0050821)
0.1 0.8 GO:0006188 IMP biosynthetic process(GO:0006188)
0.1 0.3 GO:0000212 meiotic spindle organization(GO:0000212)
0.1 1.3 GO:0006817 phosphate ion transport(GO:0006817)
0.1 0.3 GO:1902533 positive regulation of intracellular signal transduction(GO:1902533)
0.1 2.1 GO:0010941 regulation of cell death(GO:0010941)
0.1 0.5 GO:0009610 response to symbiotic fungus(GO:0009610)
0.1 0.1 GO:0043970 histone H3-K9 acetylation(GO:0043970)
0.1 0.3 GO:0048439 flower morphogenesis(GO:0048439)
0.1 0.4 GO:0019346 transsulfuration(GO:0019346) homocysteine metabolic process(GO:0050667)
0.1 0.7 GO:0006573 valine metabolic process(GO:0006573) valine catabolic process(GO:0006574)
0.1 0.6 GO:0046337 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.1 0.2 GO:0010387 COP9 signalosome assembly(GO:0010387)
0.1 0.1 GO:0046037 GMP biosynthetic process(GO:0006177) GMP metabolic process(GO:0046037)
0.1 0.6 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.1 0.8 GO:0009299 mRNA transcription(GO:0009299)
0.1 0.2 GO:0043953 protein transport by the Tat complex(GO:0043953) positive regulation of stomatal opening(GO:1902458)
0.1 0.4 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.1 0.3 GO:0034308 primary alcohol metabolic process(GO:0034308)
0.1 0.4 GO:0005513 detection of calcium ion(GO:0005513)
0.1 0.7 GO:1902074 response to salt(GO:1902074)
0.0 1.4 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.0 0.9 GO:0009937 regulation of gibberellic acid mediated signaling pathway(GO:0009937)
0.0 1.3 GO:0007029 endoplasmic reticulum organization(GO:0007029)
0.0 0.3 GO:0043102 L-methionine biosynthetic process from methylthioadenosine(GO:0019509) amino acid salvage(GO:0043102) L-methionine biosynthetic process(GO:0071265) L-methionine salvage(GO:0071267)
0.0 0.4 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.0 0.5 GO:0015749 monosaccharide transport(GO:0015749)
0.0 0.5 GO:0009942 longitudinal axis specification(GO:0009942)
0.0 0.5 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.0 3.3 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 0.4 GO:0018344 protein geranylgeranylation(GO:0018344)
0.0 2.2 GO:0000380 alternative mRNA splicing, via spliceosome(GO:0000380)
0.0 0.5 GO:0031053 primary miRNA processing(GO:0031053)
0.0 0.6 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 0.2 GO:0006517 protein deglycosylation(GO:0006517)
0.0 2.0 GO:0009631 cold acclimation(GO:0009631)
0.0 0.6 GO:0010099 regulation of photomorphogenesis(GO:0010099)
0.0 0.1 GO:0000491 small nucleolar ribonucleoprotein complex assembly(GO:0000491)
0.0 0.7 GO:0006378 mRNA polyadenylation(GO:0006378)
0.0 0.4 GO:0017183 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.0 1.5 GO:0009863 salicylic acid mediated signaling pathway(GO:0009863)
0.0 0.1 GO:0045900 negative regulation of translational elongation(GO:0045900)
0.0 0.2 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.0 0.8 GO:0006282 regulation of DNA repair(GO:0006282)
0.0 0.3 GO:0052386 cell wall thickening(GO:0052386)
0.0 1.0 GO:0019674 NAD metabolic process(GO:0019674)
0.0 0.2 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.0 0.2 GO:0051095 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.0 0.2 GO:0010390 histone monoubiquitination(GO:0010390)
0.0 2.5 GO:0009615 response to virus(GO:0009615)
0.0 0.1 GO:0046203 spermidine catabolic process(GO:0046203)
0.0 0.5 GO:0032365 intracellular lipid transport(GO:0032365)
0.0 0.4 GO:1990937 xylan acetylation(GO:1990937)
0.0 0.9 GO:0046834 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.0 0.5 GO:0002213 defense response to insect(GO:0002213)
0.0 0.1 GO:0030638 polyketide metabolic process(GO:0030638)
0.0 0.6 GO:0010093 specification of floral organ identity(GO:0010093)
0.0 0.4 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.0 1.2 GO:0002239 response to oomycetes(GO:0002239)
0.0 0.2 GO:0051646 mitochondrion localization(GO:0051646)
0.0 1.1 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.0 0.3 GO:0000731 DNA synthesis involved in DNA repair(GO:0000731)
0.0 0.9 GO:0016575 histone deacetylation(GO:0016575)
0.0 0.4 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.0 0.2 GO:0006828 manganese ion transport(GO:0006828)
0.0 0.3 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.0 1.3 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.0 0.6 GO:0009901 anther dehiscence(GO:0009901)
0.0 0.2 GO:0070525 tRNA threonylcarbamoyladenosine metabolic process(GO:0070525)
0.0 0.1 GO:0010455 positive regulation of cell fate commitment(GO:0010455)
0.0 0.1 GO:0031118 rRNA pseudouridine synthesis(GO:0031118)
0.0 0.2 GO:0006308 DNA catabolic process(GO:0006308)
0.0 0.3 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.0 0.2 GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process(GO:0006207)
0.0 0.2 GO:1990481 mRNA pseudouridine synthesis(GO:1990481)
0.0 0.7 GO:0009395 phospholipid catabolic process(GO:0009395)
0.0 0.2 GO:0042360 vitamin E biosynthetic process(GO:0010189) vitamin E metabolic process(GO:0042360)
0.0 0.3 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.0 1.2 GO:0009407 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 0.4 GO:0010315 auxin efflux(GO:0010315)
0.0 0.3 GO:0009880 embryonic pattern specification(GO:0009880)
0.0 0.1 GO:0009660 amyloplast organization(GO:0009660)
0.0 0.2 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.0 0.2 GO:0097034 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.0 0.2 GO:0031124 mRNA 3'-end processing(GO:0031124)
0.0 0.4 GO:0019253 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.0 0.2 GO:0010264 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.0 0.3 GO:0006880 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.0 0.1 GO:0090307 mitotic spindle assembly(GO:0090307) microtubule cytoskeleton organization involved in mitosis(GO:1902850)
0.0 0.3 GO:0010555 response to mannitol(GO:0010555)
0.0 0.3 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.0 0.1 GO:0000719 photoreactive repair(GO:0000719)
0.0 0.8 GO:0000413 protein peptidyl-prolyl isomerization(GO:0000413)
0.0 0.0 GO:0046470 phosphatidylcholine metabolic process(GO:0046470)
0.0 1.8 GO:0009741 response to brassinosteroid(GO:0009741)
0.0 0.5 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.0 0.1 GO:1901401 regulation of tetrapyrrole metabolic process(GO:1901401)
0.0 0.1 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.0 0.4 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.0 0.1 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.0 0.2 GO:0046513 ceramide biosynthetic process(GO:0046513)
0.0 0.5 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.0 0.1 GO:0019322 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
0.0 0.2 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.0 0.1 GO:0071763 nuclear membrane organization(GO:0071763)
0.0 0.3 GO:0010229 inflorescence development(GO:0010229)
0.0 0.4 GO:0001708 cell fate specification(GO:0001708)
0.0 0.1 GO:0009583 detection of light stimulus(GO:0009583)
0.0 0.2 GO:0030497 fatty acid elongation(GO:0030497)
0.0 1.1 GO:0019722 calcium-mediated signaling(GO:0019722)
0.0 0.0 GO:0051788 response to misfolded protein(GO:0051788)
0.0 0.2 GO:1900424 regulation of defense response to bacterium(GO:1900424)
0.0 0.1 GO:0046739 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.0 0.2 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.0 0.1 GO:0098659 inorganic cation import into cell(GO:0098659) inorganic ion import into cell(GO:0099587)
0.0 0.4 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.2 GO:0045910 negative regulation of DNA recombination(GO:0045910)
0.0 0.0 GO:0035280 miRNA loading onto RISC involved in gene silencing by miRNA(GO:0035280) small RNA loading onto RISC(GO:0070922)
0.0 0.1 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.0 0.6 GO:0030490 maturation of SSU-rRNA(GO:0030490)
0.0 0.2 GO:0002183 cytoplasmic translational initiation(GO:0002183)
0.0 0.6 GO:0034605 cellular response to heat(GO:0034605)
0.0 0.2 GO:0031348 negative regulation of defense response(GO:0031348)
0.0 0.3 GO:0072599 protein targeting to ER(GO:0045047) establishment of protein localization to endoplasmic reticulum(GO:0072599)
0.0 0.0 GO:1990116 ribosome-associated ubiquitin-dependent protein catabolic process(GO:1990116)
0.0 1.9 GO:0046777 protein autophosphorylation(GO:0046777)
0.0 0.1 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.0 0.0 GO:0052542 defense response by callose deposition(GO:0052542)
0.0 0.2 GO:0019374 galactolipid metabolic process(GO:0019374)
0.0 0.3 GO:0006914 autophagy(GO:0006914)
0.0 0.3 GO:1901421 positive regulation of abscisic acid-activated signaling pathway(GO:0009789) positive regulation of response to alcohol(GO:1901421)
0.0 0.2 GO:0018208 peptidyl-proline modification(GO:0018208)
0.0 0.0 GO:0046391 5-phosphoribose 1-diphosphate biosynthetic process(GO:0006015) 5-phosphoribose 1-diphosphate metabolic process(GO:0046391)
0.0 0.2 GO:0018231 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.0 0.1 GO:1901269 lipid A biosynthetic process(GO:0009245) lipid A metabolic process(GO:0046493) lipooligosaccharide metabolic process(GO:1901269) lipooligosaccharide biosynthetic process(GO:1901271)
0.0 0.3 GO:0036503 ER-associated ubiquitin-dependent protein catabolic process(GO:0030433) ERAD pathway(GO:0036503)
0.0 0.3 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.0 0.0 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.0 0.2 GO:0090630 activation of GTPase activity(GO:0090630)
0.0 0.2 GO:0006415 translational termination(GO:0006415)
0.0 0.3 GO:0010212 response to ionizing radiation(GO:0010212)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.0 GO:0005775 vacuolar lumen(GO:0005775)
0.3 1.8 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
0.3 1.0 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.2 4.3 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.1 0.7 GO:0005960 glycine cleavage complex(GO:0005960)
0.1 1.2 GO:0009538 photosystem I reaction center(GO:0009538)
0.1 1.1 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.1 0.5 GO:0030681 nucleolar ribonuclease P complex(GO:0005655) multimeric ribonuclease P complex(GO:0030681)
0.1 0.4 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.1 0.3 GO:0031080 nuclear pore outer ring(GO:0031080)
0.1 1.0 GO:0000813 ESCRT I complex(GO:0000813)
0.1 0.6 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.1 1.2 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.1 0.4 GO:0000839 ER ubiquitin ligase complex(GO:0000835) Hrd1p ubiquitin ligase complex(GO:0000836) Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839)
0.1 0.4 GO:0005765 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.1 1.0 GO:0005688 U6 snRNP(GO:0005688)
0.1 0.3 GO:0005640 nuclear outer membrane(GO:0005640)
0.1 2.1 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.1 0.3 GO:0070847 core mediator complex(GO:0070847)
0.1 1.0 GO:0005742 mitochondrial outer membrane translocase complex(GO:0005742)
0.1 0.3 GO:0031353 intrinsic component of plastid inner membrane(GO:0031352) integral component of plastid inner membrane(GO:0031353) intrinsic component of chloroplast inner membrane(GO:0031356) integral component of chloroplast inner membrane(GO:0031357)
0.1 0.3 GO:0043625 delta DNA polymerase complex(GO:0043625)
0.1 0.5 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.1 0.6 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.1 0.2 GO:0009514 glyoxysome(GO:0009514)
0.1 0.3 GO:0048476 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063) Holliday junction resolvase complex(GO:0048476)
0.1 0.3 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.1 0.3 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 0.6 GO:0005839 proteasome core complex(GO:0005839)
0.1 0.5 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.1 1.6 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.1 1.1 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.1 0.4 GO:0034388 Pwp2p-containing subcomplex of 90S preribosome(GO:0034388)
0.1 0.9 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.1 0.2 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.1 0.9 GO:0031965 nuclear membrane(GO:0031965)
0.1 1.5 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.1 0.4 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.1 0.6 GO:0031597 cytosolic proteasome complex(GO:0031597)
0.1 0.3 GO:0005673 transcription factor TFIIE complex(GO:0005673)
0.1 0.5 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 0.5 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.1 0.6 GO:0008180 COP9 signalosome(GO:0008180)
0.1 0.5 GO:0010445 nuclear dicing body(GO:0010445)
0.1 0.6 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 0.2 GO:0033281 TAT protein transport complex(GO:0033281)
0.1 0.6 GO:1903561 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.0 1.0 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.0 1.9 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 0.9 GO:0000784 nuclear chromosome, telomeric region(GO:0000784)
0.0 0.2 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.0 0.2 GO:0000812 Swr1 complex(GO:0000812)
0.0 0.3 GO:0005787 signal peptidase complex(GO:0005787)
0.0 0.3 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.0 0.3 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.0 1.3 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 0.5 GO:1902911 protein kinase complex(GO:1902911)
0.0 0.4 GO:0044452 nucleolar part(GO:0044452)
0.0 0.4 GO:0005844 polysome(GO:0005844)
0.0 0.5 GO:0005682 U5 snRNP(GO:0005682)
0.0 0.2 GO:0017053 transcriptional repressor complex(GO:0017053)
0.0 0.4 GO:0000974 Prp19 complex(GO:0000974)
0.0 0.4 GO:0019774 proteasome core complex, beta-subunit complex(GO:0019774)
0.0 0.1 GO:0000178 exosome (RNase complex)(GO:0000178)
0.0 3.7 GO:0000790 nuclear chromatin(GO:0000790)
0.0 0.3 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.0 0.5 GO:0005758 mitochondrial intermembrane space(GO:0005758)
0.0 1.1 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.5 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.0 1.7 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 1.3 GO:0016592 mediator complex(GO:0016592)
0.0 0.1 GO:0016328 lateral plasma membrane(GO:0016328)
0.0 0.3 GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)(GO:0005749) succinate dehydrogenase complex (ubiquinone)(GO:0045257) fumarate reductase complex(GO:0045283)
0.0 0.1 GO:0031931 TORC1 complex(GO:0031931) TOR complex(GO:0038201)
0.0 0.1 GO:0044613 nuclear pore central transport channel(GO:0044613)
0.0 0.4 GO:0005779 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.0 0.1 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.0 0.2 GO:0005956 protein kinase CK2 complex(GO:0005956)
0.0 3.7 GO:0099503 secretory vesicle(GO:0099503)
0.0 0.7 GO:0009706 chloroplast inner membrane(GO:0009706)
0.0 0.8 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.3 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.0 0.2 GO:0005665 DNA-directed RNA polymerase II, core complex(GO:0005665)
0.0 0.1 GO:0035145 exon-exon junction complex(GO:0035145)
0.0 4.8 GO:0005802 trans-Golgi network(GO:0005802)
0.0 0.1 GO:0042709 succinate-CoA ligase complex(GO:0042709)
0.0 1.9 GO:0005887 integral component of plasma membrane(GO:0005887)
0.0 1.2 GO:0010287 plastoglobule(GO:0010287)
0.0 0.2 GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)(GO:0000275)
0.0 2.7 GO:0000325 plant-type vacuole(GO:0000325)
0.0 0.2 GO:0032300 mismatch repair complex(GO:0032300)
0.0 0.1 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.0 0.1 GO:0009509 chromoplast(GO:0009509)
0.0 0.5 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
0.0 15.2 GO:0005783 endoplasmic reticulum(GO:0005783)
0.0 0.3 GO:0005686 U2 snRNP(GO:0005686)
0.0 0.2 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.0 0.2 GO:0031903 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.0 0.2 GO:0005732 small nucleolar ribonucleoprotein complex(GO:0005732)
0.0 0.1 GO:0000938 GARP complex(GO:0000938)
0.0 0.3 GO:0000139 Golgi membrane(GO:0000139)
0.0 1.1 GO:0016604 nuclear body(GO:0016604)
0.0 0.3 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 0.2 GO:0035097 histone methyltransferase complex(GO:0035097)
0.0 0.0 GO:1990112 RQC complex(GO:1990112)
0.0 1.0 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 0.1 GO:0005832 chaperonin-containing T-complex(GO:0005832)
0.0 0.1 GO:0098791 Golgi subcompartment(GO:0098791)
0.0 0.5 GO:0005770 late endosome(GO:0005770)
0.0 0.0 GO:0002189 ribose phosphate diphosphokinase complex(GO:0002189)
0.0 0.0 GO:0009897 external side of plasma membrane(GO:0009897)
0.0 0.6 GO:0030964 mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271)
0.0 34.8 GO:0005739 mitochondrion(GO:0005739)
0.0 2.7 GO:0042579 peroxisome(GO:0005777) microbody(GO:0042579)
0.0 0.0 GO:0030286 dynein complex(GO:0030286)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 2.6 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.7 4.0 GO:0016453 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
0.5 2.1 GO:0046593 mandelonitrile lyase activity(GO:0046593)
0.4 1.3 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.4 1.6 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
0.4 1.6 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.3 2.3 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.3 1.9 GO:0004838 L-tyrosine:2-oxoglutarate aminotransferase activity(GO:0004838) L-tyrosine aminotransferase activity(GO:0070547)
0.3 0.9 GO:0008936 nicotinamidase activity(GO:0008936)
0.3 0.9 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.3 1.5 GO:0010295 (+)-abscisic acid 8'-hydroxylase activity(GO:0010295)
0.3 0.9 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.3 0.9 GO:0004750 ribulose-phosphate 3-epimerase activity(GO:0004750)
0.3 0.9 GO:0008517 folic acid transporter activity(GO:0008517)
0.3 0.8 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.3 0.8 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.3 2.1 GO:0008453 alanine-glyoxylate transaminase activity(GO:0008453)
0.2 1.2 GO:0070492 oligosaccharide binding(GO:0070492)
0.2 0.7 GO:0004375 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.2 0.7 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.2 0.7 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.2 0.7 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.2 3.8 GO:0015020 glucuronosyltransferase activity(GO:0015020)
0.2 1.0 GO:0036374 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.2 0.6 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.2 0.9 GO:0004049 anthranilate synthase activity(GO:0004049)
0.2 0.6 GO:0004044 amidophosphoribosyltransferase activity(GO:0004044)
0.2 0.4 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.2 0.5 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.2 1.7 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.2 0.8 GO:0009883 red or far-red light photoreceptor activity(GO:0009883)
0.2 0.8 GO:0016174 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.2 0.5 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.2 1.5 GO:0047372 acylglycerol lipase activity(GO:0047372)
0.2 1.5 GO:0035198 miRNA binding(GO:0035198)
0.2 0.5 GO:0016262 protein N-acetylglucosaminyltransferase activity(GO:0016262)
0.2 0.5 GO:0001056 RNA polymerase I activity(GO:0001054) RNA polymerase III activity(GO:0001056)
0.2 0.5 GO:0032131 alkylated DNA binding(GO:0032131)
0.1 0.6 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.1 0.9 GO:0016426 tRNA (adenine) methyltransferase activity(GO:0016426)
0.1 0.4 GO:0004477 methenyltetrahydrofolate cyclohydrolase activity(GO:0004477) methylenetetrahydrofolate dehydrogenase (NADP+) activity(GO:0004488)
0.1 0.4 GO:0036402 proteasome-activating ATPase activity(GO:0036402)
0.1 0.4 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.1 1.3 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.1 0.4 GO:0035671 enone reductase activity(GO:0035671)
0.1 0.8 GO:0019904 protein domain specific binding(GO:0019904)
0.1 1.3 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.1 0.9 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.1 1.2 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.1 0.4 GO:0008061 chitin binding(GO:0008061)
0.1 2.7 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.1 0.4 GO:0043425 bHLH transcription factor binding(GO:0043425)
0.1 1.2 GO:0004526 ribonuclease P activity(GO:0004526)
0.1 1.2 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.1 0.6 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.1 2.4 GO:0015248 sterol transporter activity(GO:0015248)
0.1 0.4 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.1 0.5 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.1 0.6 GO:0010313 phytochrome binding(GO:0010313)
0.1 1.1 GO:0004362 glutathione-disulfide reductase activity(GO:0004362)
0.1 0.6 GO:0035620 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.1 0.9 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.1 0.3 GO:0004557 alpha-galactosidase activity(GO:0004557) raffinose alpha-galactosidase activity(GO:0052692)
0.1 0.9 GO:0017091 AU-rich element binding(GO:0017091)
0.1 2.3 GO:0016843 amine-lyase activity(GO:0016843)
0.1 0.4 GO:0071917 triose-phosphate transmembrane transporter activity(GO:0071917)
0.1 0.4 GO:0030620 U2 snRNA binding(GO:0030620) pre-mRNA intronic binding(GO:0097157)
0.1 0.3 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.1 0.7 GO:0018822 nitrilase activity(GO:0000257) hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles(GO:0016815) nitrile hydratase activity(GO:0018822) indole-3-acetonitrile nitrilase activity(GO:0080061)
0.1 0.9 GO:0009881 photoreceptor activity(GO:0009881) blue light photoreceptor activity(GO:0009882)
0.1 0.3 GO:0004140 dephospho-CoA kinase activity(GO:0004140)
0.1 0.6 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 0.3 GO:0000064 L-ornithine transmembrane transporter activity(GO:0000064) azole transmembrane transporter activity(GO:1901474)
0.1 1.5 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.1 0.5 GO:0003680 AT DNA binding(GO:0003680)
0.1 1.0 GO:0034979 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.1 0.6 GO:0004792 thiosulfate sulfurtransferase activity(GO:0004792)
0.1 0.6 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.1 0.3 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.1 0.3 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
0.1 0.7 GO:0001046 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.1 0.6 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 0.4 GO:1990381 ubiquitin-specific protease binding(GO:1990381)
0.1 0.7 GO:0009916 alternative oxidase activity(GO:0009916)
0.1 0.7 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.1 0.3 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.1 0.3 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.1 0.6 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.1 0.3 GO:0070034 telomerase RNA binding(GO:0070034)
0.1 0.8 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.1 0.5 GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity(GO:0045156)
0.1 0.7 GO:0005546 phosphatidylinositol-4,5-bisphosphate binding(GO:0005546)
0.1 0.6 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.1 1.6 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.1 0.3 GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity(GO:0010309)
0.1 0.4 GO:0038199 ethylene receptor activity(GO:0038199) ethylene binding(GO:0051740) alkene binding(GO:0072328)
0.1 0.4 GO:0001664 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.1 0.4 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.1 0.3 GO:0035197 siRNA binding(GO:0035197)
0.1 0.3 GO:0016040 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.1 0.2 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.1 0.3 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.1 0.2 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.1 0.2 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.1 0.9 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.1 0.3 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 0.2 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.1 0.2 GO:0008174 mRNA methyltransferase activity(GO:0008174)
0.1 0.6 GO:0051920 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.1 0.5 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.1 0.4 GO:0017108 5'-flap endonuclease activity(GO:0017108) flap endonuclease activity(GO:0048256)
0.1 0.3 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.1 0.7 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.1 0.2 GO:0004149 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.1 4.0 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.1 0.3 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.1 0.7 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.1 0.2 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.1 1.0 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.1 0.6 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.1 0.3 GO:0008905 mannose-phosphate guanylyltransferase activity(GO:0008905)
0.1 0.5 GO:0005471 ATP:ADP antiporter activity(GO:0005471)
0.1 0.4 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.1 3.0 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.1 0.3 GO:0004322 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.1 0.2 GO:0015924 mannosyl-oligosaccharide mannosidase activity(GO:0015924)
0.1 0.4 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.0 0.4 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.0 0.2 GO:0032791 lead ion binding(GO:0032791)
0.0 0.9 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.8 GO:0031369 translation initiation factor binding(GO:0031369)
0.0 0.1 GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters(GO:0016888)
0.0 0.6 GO:0052747 sinapyl alcohol dehydrogenase activity(GO:0052747)
0.0 0.3 GO:0046923 ER retention sequence binding(GO:0046923)
0.0 7.2 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.0 0.5 GO:0070300 phosphatidic acid binding(GO:0070300)
0.0 0.1 GO:0045430 chalcone isomerase activity(GO:0045430)
0.0 0.4 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.0 2.4 GO:0080043 quercetin 3-O-glucosyltransferase activity(GO:0080043)
0.0 0.2 GO:0017050 D-erythro-sphingosine kinase activity(GO:0017050)
0.0 0.3 GO:0016819 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.0 0.2 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.0 1.1 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 1.0 GO:0051787 misfolded protein binding(GO:0051787)
0.0 0.7 GO:0004084 branched-chain-amino-acid transaminase activity(GO:0004084)
0.0 1.3 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 1.4 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.0 0.1 GO:0034513 box H/ACA snoRNA binding(GO:0034513)
0.0 1.6 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.3 GO:0003917 DNA topoisomerase type I activity(GO:0003917)
0.0 1.8 GO:0008171 O-methyltransferase activity(GO:0008171)
0.0 0.5 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.0 0.8 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.2 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.0 1.0 GO:0004568 chitinase activity(GO:0004568)
0.0 1.6 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.3 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.0 0.5 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 0.9 GO:0008143 poly(A) binding(GO:0008143)
0.0 0.1 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.0 2.3 GO:0043130 ubiquitin binding(GO:0043130)
0.0 0.7 GO:0008266 poly(U) RNA binding(GO:0008266)
0.0 0.1 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)
0.0 0.2 GO:0051723 protein methylesterase activity(GO:0051723)
0.0 0.4 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.0 0.5 GO:0019902 phosphatase binding(GO:0019902)
0.0 3.7 GO:0019900 kinase binding(GO:0019900)
0.0 4.2 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 0.1 GO:0004046 aminoacylase activity(GO:0004046)
0.0 1.2 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.0 0.2 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.0 0.2 GO:0015391 nucleobase:cation symporter activity(GO:0015391)
0.0 0.3 GO:0004017 adenylate kinase activity(GO:0004017)
0.0 0.3 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.0 0.1 GO:0015245 fatty acid transporter activity(GO:0015245)
0.0 0.1 GO:0004831 tyrosine-tRNA ligase activity(GO:0004831)
0.0 0.4 GO:0031543 peptidyl-proline dioxygenase activity(GO:0031543)
0.0 0.3 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 1.4 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 15.2 GO:0044212 regulatory region DNA binding(GO:0000975) transcription regulatory region sequence-specific DNA binding(GO:0000976) regulatory region nucleic acid binding(GO:0001067) transcription regulatory region DNA binding(GO:0044212)
0.0 0.1 GO:0033744 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.0 0.1 GO:0004473 malate dehydrogenase (decarboxylating) (NADP+) activity(GO:0004473)
0.0 0.2 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.0 3.6 GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709)
0.0 0.1 GO:0043024 ribosomal small subunit binding(GO:0043024)
0.0 0.1 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.0 0.1 GO:0008909 isochorismate synthase activity(GO:0008909) intramolecular transferase activity, transferring hydroxy groups(GO:0050486)
0.0 2.3 GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding(GO:0000981)
0.0 0.5 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.0 0.1 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.0 0.1 GO:0004165 dodecenoyl-CoA delta-isomerase activity(GO:0004165)
0.0 5.2 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.0 1.7 GO:0004497 monooxygenase activity(GO:0004497)
0.0 0.1 GO:0004776 succinate-CoA ligase activity(GO:0004774) succinate-CoA ligase (ADP-forming) activity(GO:0004775) succinate-CoA ligase (GDP-forming) activity(GO:0004776)
0.0 0.3 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.0 0.2 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.0 0.1 GO:0005366 myo-inositol transmembrane transporter activity(GO:0005365) myo-inositol:proton symporter activity(GO:0005366) polyol transmembrane transporter activity(GO:0015166)
0.0 0.6 GO:0016832 aldehyde-lyase activity(GO:0016832)
0.0 0.3 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 0.4 GO:0031491 nucleosome binding(GO:0031491)
0.0 0.3 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.0 0.2 GO:0008079 translation release factor activity(GO:0003747) translation termination factor activity(GO:0008079)
0.0 0.2 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.0 1.0 GO:0010857 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 0.3 GO:0070122 isopeptidase activity(GO:0070122)
0.0 0.3 GO:0036002 pre-mRNA binding(GO:0036002)
0.0 0.1 GO:0016783 sulfurtransferase activity(GO:0016783)
0.0 0.8 GO:0003899 DNA-directed RNA polymerase activity(GO:0003899)
0.0 0.6 GO:0008134 transcription factor binding(GO:0008134)
0.0 4.9 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.0 0.1 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 0.4 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 0.5 GO:0004707 MAP kinase activity(GO:0004707)
0.0 0.1 GO:0000175 3'-5'-exoribonuclease activity(GO:0000175) exoribonuclease activity(GO:0004532) exoribonuclease activity, producing 5'-phosphomonoesters(GO:0016896)
0.0 2.1 GO:0005516 calmodulin binding(GO:0005516)
0.0 0.8 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.1 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.0 2.1 GO:0005509 calcium ion binding(GO:0005509)
0.0 0.5 GO:0042393 histone binding(GO:0042393)
0.0 0.2 GO:0004520 endodeoxyribonuclease activity(GO:0004520)
0.0 0.1 GO:0017169 CDP-alcohol phosphatidyltransferase activity(GO:0017169)
0.0 0.8 GO:0003712 transcription factor activity, transcription factor binding(GO:0000989) transcription cofactor activity(GO:0003712)
0.0 0.8 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 0.2 GO:0032296 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 11.4 GO:0001071 nucleic acid binding transcription factor activity(GO:0001071) transcription factor activity, sequence-specific DNA binding(GO:0003700)
0.0 0.0 GO:0016882 cyclo-ligase activity(GO:0016882)
0.0 0.2 GO:0005504 fatty acid binding(GO:0005504)
0.0 0.4 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.0 0.0 GO:0004749 ribose phosphate diphosphokinase activity(GO:0004749)
0.0 0.2 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.2 GO:0019706 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.9 SIG PIP3 SIGNALING IN CARDIAC MYOCTES Genes related to PIP3 signaling in cardiac myocytes
0.1 0.3 PID VEGF VEGFR PATHWAY VEGF and VEGFR signaling network
0.1 0.3 PID SHP2 PATHWAY SHP2 signaling
0.1 0.2 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.8 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.1 0.3 REACTOME SEMAPHORIN INTERACTIONS Genes involved in Semaphorin interactions
0.1 1.3 REACTOME FATTY ACID TRIACYLGLYCEROL AND KETONE BODY METABOLISM Genes involved in Fatty acid, triacylglycerol, and ketone body metabolism
0.1 0.3 REACTOME FRS2 MEDIATED CASCADE Genes involved in FRS2-mediated cascade
0.1 0.3 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.1 0.4 REACTOME PLATELET ACTIVATION SIGNALING AND AGGREGATION Genes involved in Platelet activation, signaling and aggregation
0.1 0.2 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.1 0.3 REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES Genes involved in Metabolism of amino acids and derivatives
0.1 1.6 REACTOME METABOLISM OF LIPIDS AND LIPOPROTEINS Genes involved in Metabolism of lipids and lipoproteins
0.0 0.3 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.0 0.3 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.0 0.2 REACTOME BIOLOGICAL OXIDATIONS Genes involved in Biological oxidations
0.0 0.3 REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.0 0.3 REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS Genes involved in ABCA transporters in lipid homeostasis
0.0 0.1 REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS Genes involved in Association of TriC/CCT with target proteins during biosynthesis
0.0 0.1 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease