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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G13910

Z-value: 1.14

Transcription factors associated with AT5G13910

Gene Symbol Gene ID Gene Info
AT5G13910
AT5G13910 Integrase-type DNA-binding superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
LEParTal_v1_Chr5_-_4483247_4483247-0.096.5e-01Click!

Activity profile of AT5G13910 motif

Sorted Z-values of AT5G13910 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_-_5645443 5.32 AT1G16510.1
AT1G16510
SAUR-like auxin-responsive protein family
Chr1_+_6100964 5.29 AT1G17745.1
AT1G17745.2
PGDH
D-3-phosphoglycerate dehydrogenase
Chr1_+_8164959 5.05 AT1G23040.3
AT1G23040.2
AT1G23040
hydroxyproline-rich glycoprotein family protein
Chr4_+_17440177 4.96 AT4G36990.1
HSF4
heat shock factor 4
Chr5_+_26772644 4.86 AT5G67080.1
MAPKKK19
mitogen-activated protein kinase kinase kinase 19
Chr1_+_8164782 4.73 AT1G23040.1
AT1G23040
hydroxyproline-rich glycoprotein family protein
Chr4_+_7239200 4.65 AT4G12080.1
AHL1
AT-hook motif nuclear-localized protein 1
Chr1_-_17266724 4.52 AT1G46768.3
AT1G46768.2
AT1G46768.1
RAP2.1
related to AP2 1
Chr1_-_24362054 4.21 AT1G65520.1
ECI1
delta(3), delta(2)-enoyl CoA isomerase 1
Chr4_+_12977192 4.16 AT4G25390.1
AT4G25390.2
AT4G25390
Protein kinase superfamily protein
Chr1_+_4416315 4.06 AT1G12940.1
NRT2.5
nitrate transporter2.5
Chr2_+_8998450 3.77 AT2G20920.1
AT2G20920
chaperone (DUF3353)
Chr3_+_16383595 3.74 AT3G44880.1
ACD1
Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein
Chr5_-_315405 3.57 AT5G01820.1
SR1
serine/threonine protein kinase 1
Chr4_-_12890261 3.51 AT4G25110.2
AT4G25110.1
MC2
metacaspase 2
Chr4_-_15507176 3.50 AT4G32070.2
AT4G32070.1
Phox4
Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
Chr1_+_5090809 3.46 AT1G14780.1
AT1G14780
MAC/Perforin domain-containing protein
Chr5_-_24317935 3.40 AT5G60460.2
AT5G60460
Preprotein translocase Sec, Sec61-beta subunit protein
Chr1_-_18477643 3.38 AT1G49900.1
AT1G49900
C2H2 type zinc finger transcription factor family
Chr1_-_19690589 3.37 AT1G52880.1
NAM
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr1_-_498539 3.36 AT1G02450.1
NIMIN1
NIM1-interacting 1
Chr5_-_24318241 3.34 AT5G60460.1
AT5G60460
Preprotein translocase Sec, Sec61-beta subunit protein
Chr3_-_1791887 3.30 AT3G05970.1
LACS6
long-chain acyl-CoA synthetase 6
Chr5_-_4722371 3.27 AT5G14640.1
SK13
shaggy-like kinase 13
Chr5_-_4722048 3.19 AT5G14640.2
SK13
shaggy-like kinase 13
Chr2_-_11685342 3.13 AT2G27310.1
AT2G27310
F-box family protein
Chr5_-_19977620 3.11 AT5G49280.1
AT5G49280
hydroxyproline-rich glycoprotein family protein
Chr1_-_30142697 3.09 AT1G80130.1
AT1G80130
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_-_29465249 3.08 AT1G78310.1
AT1G78310
VQ motif-containing protein
Chr4_+_13847549 3.04 AT4G27780.2
AT4G27780.1
ACBP2
acyl-CoA binding protein 2
Chr5_+_25692425 3.00 AT5G64230.1
AT5G64230
1,8-cineole synthase
Chr1_-_25445357 2.98 AT1G67860.1
AT1G67860
transmembrane protein
Chr3_+_6536534 2.98 AT3G18950.1
AT3G18950
Transducin/WD40 repeat-like superfamily protein
Chr1_-_9956960 2.97 AT1G28370.1
AT1G28370.2
ERF11
ERF domain protein 11
Chr2_+_15750915 2.96 AT2G37530.1
AT2G37530
forkhead box protein G1
Chr4_-_9920511 2.89 AT4G17840.1
AT4G17840
CAAX protease self-immunity protein
Chr2_-_16115204 2.85 AT2G38490.1
CIPK22
CBL-interacting Serine/Threonine-kinase
Chr1_-_27640643 2.83 AT1G73500.1
MKK9
MAP kinase kinase 9
Chr5_+_25721733 2.80 AT5G64310.1
AGP1
arabinogalactan protein 1
Chr5_-_26531176 2.79 AT5G66440.1
AT5G66440
tRNA-methyltransferase non-catalytic subunit trm6MTase subunit
Chr5_-_23725585 2.74 AT5G58730.1
Mik
pfkB-like carbohydrate kinase family protein
Chr2_+_15514923 2.71 AT2G36950.1
AT2G36950
Heavy metal transport/detoxification superfamily protein
Chr3_+_19431095 2.67 AT3G52430.1
PAD4
alpha/beta-Hydrolases superfamily protein
Chr2_+_15592552 2.59 AT2G37110.1
AT2G37110
PLAC8 family protein
Chr5_-_4474530 2.58 AT5G13860.1
ELC-Like
ELCH-like protein
Chr2_+_621058 2.58 AT2G02370.1
AT2G02370.3
AT2G02370.2
AT2G02370
SNARE associated Golgi protein family
Chr1_+_28163344 2.57 AT1G75000.1
AT1G75000
GNS1/SUR4 membrane protein family
Chr2_-_17422747 2.47 AT2G41750.1
AT2G41750
DTW domain-containing protein
Chr5_+_7090704 2.44 AT5G20900.1
JAZ12
jasmonate-zim-domain protein 12
Chr3_+_590425 2.43 AT3G02740.1
AT3G02740.2
AT3G02740
Eukaryotic aspartyl protease family protein
Chr2_-_9706217 2.42 AT2G22800.1
HAT9
Homeobox-leucine zipper protein family
Chr1_+_27397089 2.41 AT1G72800.1
AT1G72800
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr1_-_25446952 2.41 AT1G67865.1
AT1G67865
hypothetical protein
Chr1_-_25447622 2.40 AT1G67865.2
AT1G67865
hypothetical protein
Chr2_+_114926 2.32 AT2G01190.1
PDE331
Octicosapeptide/Phox/Bem1p family protein
Chr1_+_9951762 2.30 AT1G28360.1
ERF12
ERF domain protein 12
Chr2_-_9266393 2.28 AT2G21660.2
GRP7
cold, circadian rhythm, and rna binding 2
Chr1_+_11844660 2.25 AT1G32740.2
AT1G32740.1
AT1G32740.3
AT1G32740
SBP (S-ribonuclease binding protein) family protein
Chr2_-_9266557 2.24 AT2G21660.1
GRP7
cold, circadian rhythm, and rna binding 2
Chr4_-_15339613 2.19 AT4G31670.1
UBP18
ubiquitin-specific protease 18
Chr1_+_27784928 2.19 AT1G73880.1
UGT89B1
UDP-glucosyl transferase 89B1
Chr3_-_1002595 2.17 AT3G03890.1
AT3G03890
FMN binding protein
Chr5_-_5358789 2.17 AT5G16370.1
AAE5
acyl activating enzyme 5
Chr2_+_7564240 2.17 AT2G17420.1
AT2G17420.2
NTRA
NADPH-dependent thioredoxin reductase A
Chr3_-_1002083 2.16 AT3G03890.2
AT3G03890
FMN binding protein
Chr5_-_7636576 2.16 AT5G22850.1
AT5G22850
Eukaryotic aspartyl protease family protein
Chr5_+_21505074 2.15 AT5G53030.1
AT5G53030.2
AT5G53030
hypothetical protein
Chr4_+_7731189 2.11 AT4G13270.1
AT4G13270
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr4_+_16997091 2.10 AT4G35890.2
AT4G35890.1
LARP1c
winged-helix DNA-binding transcription factor family protein
Chr5_-_16913991 2.10 AT5G42300.1
UBL5
ubiquitin-like protein 5
Chr3_+_6820926 2.10 AT3G19640.1
MGT4
magnesium transporter 4
Chr1_+_12004854 2.09 AT1G33110.1
AT1G33110.2
AT1G33110
MATE efflux family protein
Chr3_-_7445303 2.07 AT3G21215.2
AT3G21215.3
AT3G21215.4
AT3G21215.1
AT3G21215
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr5_+_4756057 2.03 AT5G14730.1
AT5G14730
hypothetical protein
Chr2_+_1156593 1.99 AT2G03800.2
AT2G03800.1
GEK1
D-aminoacyl-tRNA deacylase
Chr4_-_9871646 1.96 AT4G17750.1
HSF1
heat shock factor 1
Chr1_+_17432433 1.96 AT1G47500.1
AT1G47500.2
RBP47C'
RNA-binding protein 47C'
Chr2_-_10988924 1.95 AT2G25760.2
AT2G25760
Protein kinase family protein
Chr1_+_29502506 1.94 AT1G78410.1
AT1G78410.2
AT1G78410
VQ motif-containing protein
Chr1_+_22409298 1.94 AT1G60870.1
MEE9
maternal effect embryo arrest 9
Chr2_+_11669629 1.93 AT2G27260.1
AT2G27260
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr2_+_15928591 1.93 AT2G38070.1
AT2G38070
LOW protein: UPF0503-like protein, putative (DUF740)
Chr2_-_10989117 1.92 AT2G25760.1
AT2G25760
Protein kinase family protein
Chr5_-_20506354 1.91 AT5G50360.1
AT5G50360
von willebrand factor A domain protein
Chr2_-_16042383 1.87 AT2G38290.2
AT2G38290.1
AMT2
ammonium transporter 2
Chr3_-_10977527 1.84 AT3G28950.1
AT3G28950
AIG2-like (avirulence induced gene) family protein
Chr1_-_2013459 1.82 AT1G06570.1
AT1G06570.2
PDS1
4-hydroxyphenylpyruvate dioxygenase
Chr5_+_2560328 1.81 AT5G07990.1
TT7
Cytochrome P450 superfamily protein
Chr2_-_13835758 1.81 AT2G32600.1
AT2G32600
hydroxyproline-rich glycoprotein family protein
Chr5_+_26045327 1.81 AT5G65180.2
AT5G65180.1
AT5G65180
ENTH/VHS family protein
Chr2_-_11777529 1.80 AT2G27580.2
AT2G27580.1
AT2G27580
A20/AN1-like zinc finger family protein
Chr5_+_7946285 1.78 AT5G23575.1
AT5G23575
Transmembrane CLPTM1 family protein
Chr4_+_14409772 1.74 AT4G29230.1
AT4G29230.2
AT4G29230.3
NAC075
NAC domain containing protein 75
Chr4_+_9759203 1.73 AT4G17500.1
ERF-1
ethylene responsive element binding factor 1
Chr3_+_6251315 1.70 AT3G18230.1
AT3G18230
Octicosapeptide/Phox/Bem1p family protein
Chr1_-_22794714 1.66 AT1G61730.1
AT1G61730
DNA-binding storekeeper protein-related transcriptional regulator
Chr3_-_5618322 1.60 AT3G16510.1
AT3G16510
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr4_-_8305857 1.59 AT4G14430.1
IBR10
indole-3-butyric acid response 10
Chr1_-_2467058 1.58 AT1G07950.1
AT1G07950.2
MED22B
Surfeit locus protein 5 subunit 22 of Mediator complex
Chr1_+_954290 1.58 AT1G03790.1
SOM
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr1_+_11844988 1.58 AT1G32740.4
AT1G32740
SBP (S-ribonuclease binding protein) family protein
Chr1_-_11222789 1.57 AT1G31350.1
AT1G31350.2
KUF1
KAR-UP F-box 1
Chr1_+_27026677 1.56 AT1G71860.1
AT1G71860.3
AT1G71860.2
PTP1
protein tyrosine phosphatase 1
Chr4_+_9891051 1.54 AT4G17790.1
AT4G17790
SNARE associated Golgi protein family
Chr1_+_345516 1.53 AT1G02000.1
GAE2
UDP-D-glucuronate 4-epimerase 2
Chr2_+_18795926 1.53 AT2G45630.1
AT2G45630.2
AT2G45630
D-isomer specific 2-hydroxyacid dehydrogenase family protein
Chr4_-_8369312 1.50 AT4G14580.1
CIPK4
CBL-interacting protein kinase 4
Chr1_+_3363432 1.49 AT1G10270.1
GRP23
glutamine-rich protein 23
Chr1_-_11595982 1.48 AT1G32190.2
AT1G32190.1
AT1G32190
alpha/beta-Hydrolases superfamily protein
Chr3_-_1261634 1.47 AT3G04640.2
AT3G04640.1
AT3G04640.3
AT3G04640
glycine-rich protein
Chr1_+_2304435 1.47 AT1G07510.1
ftsh10
FTSH protease 10
Chr2_+_216605 1.45 AT2G01480.1
AT2G01480.2
AT2G01480
O-fucosyltransferase family protein
Chr1_+_23740493 1.45 AT1G63980.1
AT1G63980.2
AT1G63980
D111/G-patch domain-containing protein
Chr2_+_1025 1.45 AT2G01008.1
AT2G01008
maternal effect embryo arrest protein
Chr5_+_22388782 1.43 AT5G55180.2
AT5G55180
O-Glycosyl hydrolases family 17 protein
Chr3_+_17867131 1.43 AT3G48240.1
AT3G48240
Octicosapeptide/Phox/Bem1p family protein
Chr1_-_2406049 1.43 AT1G07750.1
AT1G07750
RmlC-like cupins superfamily protein
Chr5_-_1918896 1.41 AT5G06280.3
AT5G06280.1
AT5G06280
hypothetical protein
Chr5_-_20544857 1.41 AT5G50450.1
AT5G50450
HCP-like superfamily protein with MYND-type zinc finger
Chr4_+_17388649 1.41 AT4G36900.1
RAP2.10
related to AP2 10
Chr5_+_22388521 1.37 AT5G55180.1
AT5G55180
O-Glycosyl hydrolases family 17 protein
Chr5_+_9149073 1.36 AT5G26180.1
AT5G26180.2
AT5G26180.4
AT5G26180.3
AT5G26180.5
AT5G26180
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_+_17731005 1.33 AT5G44060.1
AT5G44060
embryo sac development arrest protein
Chr5_-_37999 1.32 AT5G01100.1
FRB1
O-fucosyltransferase family protein
Chr3_-_10941833 1.32 AT3G28920.1
HB34
homeobox protein 34
Chr2_-_9767 1.31 AT2G01023.1
AT2G01023
hypothetical protein
Chr3_-_1617339 1.30 AT3G05570.1
AT3G05570
dipeptide transport ATP-binding protein
Chr1_-_1399053 1.28 AT1G04930.3
AT1G04930.2
AT1G04930.1
AT1G04930
hydroxyproline-rich glycoprotein family protein
Chr5_-_3148400 1.27 AT5G10060.1
AT5G10060
ENTH/VHS family protein
Chr1_+_2762584 1.27 AT1G08680.4
AT1G08680.1
AT1G08680.3
AT1G08680.2
AT1G08680.5
ZIGA4
ARF GAP-like zinc finger-containing protein ZIGA4
Chr3_+_5341356 1.26 AT3G15780.1
AT3G15780
transmembrane protein
Chr5_+_3931349 1.25 AT5G12170.2
AT5G12170.3
CLT3
CRT (chloroquine-resistance transporter)-like transporter 3
Chr2_+_19079305 1.25 AT2G46490.1
AT2G46490
hypothetical protein
Chr4_-_16853035 1.25 AT4G35480.1
RHA3B
RING-H2 finger A3B
Chr5_+_25831635 1.25 AT5G64620.1
C/VIF2
cell wall / vacuolar inhibitor of fructosidase 2
Chr4_-_7386931 1.22 AT4G12450.1
AT4G12450
zinc finger (C2H2 type) family protein
Chr1_+_25016402 1.20 AT1G67030.1
ZFP6
zinc finger protein 6
Chr2_-_17613591 1.19 AT2G42280.2
AT2G42280.3
AT2G42280.1
FBH4
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr2_+_4802783 1.18 AT2G11890.2
AT2G11890.1
AT2G11890
adenylate cyclase
Chr1_+_26814260 1.17 AT1G71100.1
RSW10
Ribose 5-phosphate isomerase, type A protein
Chr3_+_17558793 1.15 AT3G47620.1
TCP14
TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14
Chr2_+_18606410 1.14 AT2G45130.1
SPX3
SPX domain protein 3
Chr2_+_19011462 1.14 AT2G46310.1
CRF5
cytokinin response factor 5
Chr1_+_20895582 1.13 AT1G55870.3
AT1G55870.4
AT1G55870.1
AT1G55870.2
AHG2
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr3_-_6716178 1.12 AT3G19380.1
PUB25
plant U-box 25
Chr3_-_3663986 1.11 AT3G11591.1
AT3G11591
bric-a-brac protein
Chr5_-_3065889 1.11 AT5G09850.2
AT5G09850.1
AT5G09850.3
AT5G09850.4
AT5G09850.5
AT5G09850
Transcription elongation factor (TFIIS) family protein
Chr1_-_23801720 1.10 AT1G64110.1
AT1G64110.3
AT1G64110.2
DAA1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_+_251686 1.08 AT5G01670.2
AT5G01670.1
AT5G01670
NAD(P)-linked oxidoreductase superfamily protein
Chr2_-_10905267 1.07 AT2G25620.2
AT2G25620.1
DBP1
DNA-binding protein phosphatase 1
Chr4_-_9199840 1.05 AT4G16250.1
PHYD
phytochrome D
Chr3_-_4660945 1.05 AT3G14067.1
AT3G14067
Subtilase family protein
Chr1_-_30304428 1.02 AT1G80610.1
AT1G80610
hypothetical protein
Chr3_+_22645492 1.01 AT3G61180.1
AT3G61180
RING/U-box superfamily protein
Chr3_-_21685974 1.01 AT3G58630.2
AT3G58630.1
AT3G58630
sequence-specific DNA binding transcription factor
Chr5_-_8982873 1.00 AT5G25800.2
AT5G25800.1
AT5G25800
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr1_-_29027108 1.00 AT1G77260.1
AT1G77260
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_+_8242369 0.99 AT1G23220.1
AT1G23220
Dynein light chain type 1 family protein
Chr5_+_11713113 0.98 AT5G31787.1
AT5G31787

Chr1_+_25325138 0.97 AT1G67570.1
AT1G67570.2
AT1G67570
zinc finger CONSTANS-like protein (DUF3537)
Chr5_+_395567 0.96 AT5G02030.1
RPL
POX (plant homeobox) family protein
Chr1_+_27394598 0.96 AT1G72790.1
AT1G72790
hydroxyproline-rich glycoprotein family protein
Chr3_+_8152038 0.95 AT3G22970.2
AT3G22970.1
AT3G22970
hypothetical protein (DUF506)
Chr3_+_677240 0.95 AT3G03000.1
AT3G03000
EF hand calcium-binding protein family
Chr3_-_10147892 0.94 AT3G27416.1
AT3G27416
transmembrane protein
Chr3_-_23301865 0.93 AT3G63060.1
EDL3
EID1-like 3
Chr1_-_27026363 0.90 AT1G71850.1
AT1G71850
Ubiquitin carboxyl-terminal hydrolase family protein
Chr5_+_8735944 0.90 AT5G25220.1
AT5G25220.2
KNAT3
homeobox protein knotted-1-like 3
Chr2_+_9917443 0.90 AT2G23310.1
AT2G23310.2
ATRER1C1
Rer1 family protein
Chr2_-_16038972 0.88 AT2G38280.2
AT2G38280.1
FAC1
AMP deaminase, putative / myoadenylate deaminase
Chr3_+_6146015 0.87 AT3G17950.3
AT3G17950.1
AT3G17950.2
AT3G17950
transmembrane protein
Chr3_+_2413623 0.86 AT3G07565.1
AT3G07565.3
AT3G07565.4
AT3G07565.2
AT3G07565
histone H2A deubiquitinase (DUF3755)
Chr3_+_22818589 0.86 AT3G61670.1
AT3G61670.2
AT3G61670
extra-large G-like protein, putative (DUF3133)
Chr5_+_1503232 0.85 AT5G05090.1
AT5G05090
Homeodomain-like superfamily protein
Chr4_+_7042354 0.84 AT4G11660.1
AT-HSFB2B
winged-helix DNA-binding transcription factor family protein
Chr1_+_29665166 0.84 AT1G78910.2
AT1G78910.1
AT1G78910
Pseudouridine synthase family protein
Chr4_-_12725835 0.83 AT4G24660.1
HB22
homeobox protein 22
Chr2_-_18907973 0.83 AT2G45950.2
AT2G45950.1
AT2G45950.3
SK20
SKP1-like 20
Chr5_+_22341750 0.82 AT5G55060.2
AT5G55060.1
AT5G55060
Rab3 GTPase-activating protein catalytic subunit
Chr1_-_21514022 0.82 AT1G58100.2
TCP8
TCP family transcription factor
Chr5_+_7524086 0.81 AT5G22630.1
ADT5
arogenate dehydratase 5
Chr1_-_21514189 0.81 AT1G58100.1
TCP8
TCP family transcription factor
Chr3_+_16871578 0.79 AT3G45890.1
RUS1
root UVB sensitive-like protein (Protein of unknown function, DUF647)
Chr5_+_23096024 0.79 AT5G57070.1
AT5G57070
hydroxyproline-rich glycoprotein family protein
Chr2_-_14211693 0.78 AT2G33550.1
AT2G33550
Homeodomain-like superfamily protein
Chr1_+_20901243 0.78 AT1G55890.1
AT1G55890
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_22331427 0.78 AT3G60410.2
AT3G60410.1
AT3G60410.3
AT3G60410
hypothetical protein (DUF1639)
Chr3_+_5121303 0.77 AT3G15210.1
ERF4
ethylene responsive element binding factor 4
Chr4_-_172845 0.75 AT4G00390.1
AT4G00390
DNA-binding storekeeper protein-related transcriptional regulator
Chr1_-_23801283 0.74 AT1G64110.5
AT1G64110.4
DAA1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_+_17424473 0.74 AT1G47490.2
AT1G47490.1
RBP47C
RNA-binding protein 47C
Chr5_+_22957629 0.73 AT5G56750.1
NDL1
N-MYC downregulated-like 1
Chr1_-_29492875 0.72 AT1G78390.1
NCED9
nine-cis-epoxycarotenoid dioxygenase 9
Chr5_+_20255173 0.72 AT5G49840.3
AT5G49840.2
AT5G49840.4
AT5G49840.1
AT5G49840
ATP-dependent Clp protease
Chr1_+_4556878 0.69 AT1G13300.1
HRS1
myb-like transcription factor family protein
Chr2_-_18907477 0.69 AT2G45950.4
AT2G45950.5
SK20
SKP1-like 20
Chr3_-_2524168 0.69 AT3G07910.1
AT3G07910
reactive oxygen species modulator-like protein
Chr4_+_1573266 0.69 AT4G03550.1
GSL05
glucan synthase-like 5
Chr3_-_6430517 0.68 AT3G18690.1
MKS1
MAP kinase substrate 1
Chr5_-_25155983 0.66 AT5G62650.1
AT5G62650
Tic22-like family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G13910

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 5.3 GO:0006564 L-serine biosynthetic process(GO:0006564)
1.0 6.2 GO:1900367 positive regulation of defense response to insect(GO:1900367)
1.0 3.0 GO:0010288 response to lead ion(GO:0010288)
0.7 6.7 GO:0031204 posttranslational protein targeting to membrane, translocation(GO:0031204)
0.7 2.0 GO:0046416 D-amino acid metabolic process(GO:0046416)
0.6 1.9 GO:0015696 ammonium transport(GO:0015696)
0.4 4.0 GO:0071249 cellular response to nitrate(GO:0071249)
0.4 1.1 GO:0080040 positive regulation of cellular response to phosphate starvation(GO:0080040)
0.4 1.4 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.3 1.6 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.3 1.3 GO:0042939 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.3 2.7 GO:0033517 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.3 3.4 GO:0048317 seed morphogenesis(GO:0048317)
0.3 1.8 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.2 3.3 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.2 2.8 GO:0010120 camalexin biosynthetic process(GO:0010120) camalexin metabolic process(GO:0052317)
0.2 2.1 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.2 0.6 GO:0072337 modified amino acid transport(GO:0072337)
0.2 0.8 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.2 3.7 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.2 1.0 GO:2000576 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.2 0.7 GO:0006427 histidyl-tRNA aminoacylation(GO:0006427)
0.2 3.4 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.2 1.0 GO:0048439 flower morphogenesis(GO:0048439)
0.1 1.0 GO:0009584 detection of visible light(GO:0009584)
0.1 1.2 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.1 0.4 GO:0055047 generative cell mitosis(GO:0055047)
0.1 2.4 GO:0071451 removal of superoxide radicals(GO:0019430) cellular response to oxygen radical(GO:0071450) cellular response to superoxide(GO:0071451)
0.1 0.9 GO:0009720 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.1 0.4 GO:0043970 histone H3-K9 acetylation(GO:0043970)
0.1 3.5 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.1 1.4 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.1 8.0 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.1 1.4 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.1 0.3 GO:0006386 termination of RNA polymerase III transcription(GO:0006386)
0.1 4.2 GO:0006635 fatty acid beta-oxidation(GO:0006635)
0.1 1.1 GO:0002697 regulation of immune effector process(GO:0002697) regulation of defense response to virus(GO:0050688)
0.1 3.1 GO:0031124 mRNA 3'-end processing(GO:0031124)
0.1 1.4 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.1 0.8 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.1 1.4 GO:2000032 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.1 0.7 GO:0046247 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.1 0.8 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.1 1.7 GO:1905177 tracheary element differentiation(GO:1905177)
0.1 5.0 GO:0034605 cellular response to heat(GO:0034605)
0.1 1.8 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.1 0.7 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.1 0.9 GO:0006621 protein retention in ER lumen(GO:0006621)
0.1 3.5 GO:0009626 plant-type hypersensitive response(GO:0009626)
0.1 2.4 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.1 0.9 GO:0043101 IMP biosynthetic process(GO:0006188) purine nucleotide salvage(GO:0032261) purine-containing compound salvage(GO:0043101)
0.1 6.3 GO:0010200 response to chitin(GO:0010200)
0.1 1.6 GO:0031348 negative regulation of defense response(GO:0031348)
0.1 1.2 GO:0010229 inflorescence development(GO:0010229)
0.0 1.2 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 1.3 GO:1903338 regulation of cell wall organization or biogenesis(GO:1903338)
0.0 1.8 GO:0048235 pollen sperm cell differentiation(GO:0048235)
0.0 1.4 GO:0043547 positive regulation of GTPase activity(GO:0043547)
0.0 2.6 GO:0009873 ethylene-activated signaling pathway(GO:0009873)
0.0 0.8 GO:0010187 negative regulation of seed germination(GO:0010187)
0.0 0.5 GO:0032544 plastid translation(GO:0032544)
0.0 0.9 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.0 5.0 GO:0009408 response to heat(GO:0009408)
0.0 3.4 GO:0080167 response to karrikin(GO:0080167)
0.0 1.2 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.0 5.4 GO:0050832 defense response to fungus(GO:0050832)
0.0 2.2 GO:0016579 protein deubiquitination(GO:0016579)
0.0 3.0 GO:0019760 S-glycoside metabolic process(GO:0016143) glycosinolate metabolic process(GO:0019757) glucosinolate metabolic process(GO:0019760)
0.0 0.3 GO:0015749 monosaccharide transport(GO:0015749)
0.0 0.6 GO:0009880 embryonic pattern specification(GO:0009880)
0.0 0.9 GO:0043269 regulation of ion transport(GO:0043269)
0.0 0.5 GO:0061572 microsporogenesis(GO:0009556) actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.0 0.5 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.0 2.1 GO:0009753 response to jasmonic acid(GO:0009753)
0.0 4.6 GO:0009414 response to water deprivation(GO:0009414)
0.0 2.1 GO:0000398 mRNA splicing, via spliceosome(GO:0000398)
0.0 0.6 GO:0010102 post-embryonic root morphogenesis(GO:0010101) lateral root morphogenesis(GO:0010102)
0.0 1.0 GO:0048573 photoperiodism, flowering(GO:0048573)
0.0 0.1 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 6.7 GO:0031205 endoplasmic reticulum Sec complex(GO:0031205)
1.0 3.0 GO:0009514 glyoxysome(GO:0009514)
0.3 2.6 GO:0000813 ESCRT I complex(GO:0000813)
0.2 1.3 GO:0017053 transcriptional repressor complex(GO:0017053)
0.2 1.0 GO:0030286 dynein complex(GO:0030286)
0.2 2.1 GO:0005844 polysome(GO:0005844)
0.1 2.4 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.1 0.4 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 0.6 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.1 1.8 GO:0005686 U2 snRNP(GO:0005686)
0.1 3.7 GO:0009706 chloroplast inner membrane(GO:0009706)
0.1 7.8 GO:0044216 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.1 1.4 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.8 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.0 3.1 GO:0016591 DNA-directed RNA polymerase II, holoenzyme(GO:0016591)
0.0 1.6 GO:0016592 mediator complex(GO:0016592)
0.0 2.6 GO:0098687 chromosomal region(GO:0098687)
0.0 4.0 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 11.3 GO:0005777 peroxisome(GO:0005777) microbody(GO:0042579)
0.0 0.7 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.0 2.9 GO:0005759 mitochondrial matrix(GO:0005759)
0.0 0.9 GO:0030173 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 0.5 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.5 GO:0009574 preprophase band(GO:0009574)
0.0 1.5 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.0 0.9 GO:0000325 plant-type vacuole(GO:0000325)
0.0 4.5 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.3 GO:0005666 DNA-directed RNA polymerase III complex(GO:0005666)
0.0 0.4 GO:0000123 histone acetyltransferase complex(GO:0000123)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.3 5.3 GO:0004617 phosphoglycerate dehydrogenase activity(GO:0004617)
1.2 5.8 GO:0004165 dodecenoyl-CoA delta-isomerase activity(GO:0004165)
0.9 4.7 GO:0003680 AT DNA binding(GO:0003680)
0.8 3.0 GO:0032791 lead ion binding(GO:0032791)
0.7 3.7 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.7 6.7 GO:0005086 ARF guanyl-nucleotide exchange factor activity(GO:0005086)
0.6 1.9 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.4 2.2 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.4 1.1 GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity(GO:0019166)
0.3 8.0 GO:0097602 cullin family protein binding(GO:0097602)
0.3 4.0 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.3 2.1 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.3 1.2 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.3 3.3 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.2 1.4 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.2 1.1 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.2 1.6 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.2 2.8 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.2 0.6 GO:0008517 folic acid transporter activity(GO:0008517)
0.2 1.0 GO:0009883 red or far-red light photoreceptor activity(GO:0009883)
0.2 3.1 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.2 1.0 GO:0051959 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.2 0.6 GO:0045430 chalcone isomerase activity(GO:0045430)
0.2 0.7 GO:0004821 histidine-tRNA ligase activity(GO:0004821)
0.1 2.1 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.1 0.8 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 2.9 GO:0008143 poly(A) binding(GO:0008143)
0.1 2.5 GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702)
0.1 0.4 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.1 1.1 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.1 2.1 GO:0031386 protein tag(GO:0031386)
0.1 11.0 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.1 5.7 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.1 8.9 GO:0019900 kinase binding(GO:0019900)
0.1 0.5 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.0 2.6 GO:0005096 GTPase activator activity(GO:0005096)
0.0 0.8 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.8 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.0 2.2 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 1.4 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 1.9 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.0 1.6 GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding(GO:0000981)
0.0 1.2 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.5 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.2 GO:0016161 beta-amylase activity(GO:0016161)
0.0 0.3 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.0 1.0 GO:0004527 exonuclease activity(GO:0004527)
0.0 0.4 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.5 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 5.7 GO:0000975 regulatory region DNA binding(GO:0000975) transcription regulatory region sequence-specific DNA binding(GO:0000976) regulatory region nucleic acid binding(GO:0001067) transcription regulatory region DNA binding(GO:0044212)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.0 PID P73PATHWAY p73 transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 4.2 REACTOME FATTY ACID TRIACYLGLYCEROL AND KETONE BODY METABOLISM Genes involved in Fatty acid, triacylglycerol, and ketone body metabolism