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GSE43616: Time-course of wild-type Arabidopsis leaf
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Results for AT5G10510
Z-value: 0.56
Transcription factors associated with AT5G10510
| Gene Symbol | Gene ID | Gene Info |
|---|---|---|
|
AT5G10510
|
AT5G10510 | AINTEGUMENTA-like 6 |
Activity-expression correlation:
| Gene | Promoter | Pearson corr. coef. | P-value | Plot |
|---|---|---|---|---|
| AIL6 | arTal_v1_Chr5_+_3316247_3316247 | 0.46 | 1.3e-02 | Click! |
| Promoter | Log-likelihood | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| arTal_v1_Chr4_-_18098633_18098633 Show fit | 1.70 |
AT4G38770.1
|
proline-rich protein 4 |
|
| arTal_v1_Chr4_+_14215473_14215473 Show fit | 1.66 |
AT4G28780.1
|
GDSL-like Lipase/Acylhydrolase superfamily protein |
|
| arTal_v1_Chr2_-_9428170_9428170 Show fit | 1.42 |
AT2G22170.1
|
Lipase/lipooxygenase, PLAT/LH2 family protein |
|
| arTal_v1_Chr3_-_20142763_20142763 Show fit | 1.35 |
AT3G54400.1
|
Eukaryotic aspartyl protease family protein |
|
| arTal_v1_Chr4_-_3065294_3065294 Show fit | 1.05 |
AT4G06477.1
|
|
|
| arTal_v1_Chr1_+_564018_564018 Show fit | 1.00 |
AT1G02640.1
|
beta-xylosidase 2 |
|
| arTal_v1_Chr1_+_19775923_19775923 Show fit | 0.95 |
AT1G53060.1
|
Legume lectin family protein |
|
| arTal_v1_Chr2_+_3618058_3618058 Show fit | 0.93 |
AT2G08986.1
|
hypothetical protein |
|
| arTal_v1_Chr1_+_7065494_7065494 Show fit | 0.83 |
AT1G20390.1
|
|
|
| arTal_v1_Chr3_-_8058764_8058782 Show fit | 0.76 |
AT3G22790.3
AT3G22790.2 |
Kinase interacting (KIP1-like) family protein |
Network of associatons between targets according to the STRING database.
First level regulatory network of AT5G10510
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 1.6 | GO:0009833 | plant-type primary cell wall biogenesis(GO:0009833) |
| 0.1 | 1.0 | GO:0031222 | arabinan catabolic process(GO:0031222) |
| 0.1 | 0.7 | GO:0010395 | rhamnogalacturonan I metabolic process(GO:0010395) |
| 0.0 | 0.7 | GO:0010052 | guard cell differentiation(GO:0010052) |
| 0.1 | 0.6 | GO:0046937 | phytochelatin metabolic process(GO:0046937) phytochelatin biosynthetic process(GO:0046938) cellular response to cadmium ion(GO:0071276) cellular detoxification of cadmium ion(GO:0098849) |
| 0.1 | 0.6 | GO:0046466 | membrane lipid catabolic process(GO:0046466) |
| 0.1 | 0.6 | GO:0016123 | xanthophyll biosynthetic process(GO:0016123) |
| 0.0 | 0.6 | GO:0009556 | microsporogenesis(GO:0009556) |
| 0.1 | 0.5 | GO:0006097 | glyoxylate cycle(GO:0006097) |
| 0.1 | 0.5 | GO:0009590 | detection of gravity(GO:0009590) |
Gene overrepresentation in cellular component category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.3 | 1.1 | GO:0010330 | cellulose synthase complex(GO:0010330) |
| 0.0 | 0.5 | GO:0010319 | stromule(GO:0010319) |
| 0.0 | 0.4 | GO:0009574 | preprophase band(GO:0009574) |
| 0.1 | 0.3 | GO:0048476 | Holliday junction resolvase complex(GO:0048476) |
| 0.0 | 0.3 | GO:0005685 | U1 snRNP(GO:0005685) |
| 0.0 | 0.2 | GO:0005677 | chromatin silencing complex(GO:0005677) |
| 0.0 | 0.2 | GO:0089701 | commitment complex(GO:0000243) U2AF(GO:0089701) |
| 0.0 | 0.2 | GO:0031231 | integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231) |
| 0.0 | 0.2 | GO:0031903 | peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903) |
| 0.0 | 0.1 | GO:0009514 | glyoxysome(GO:0009514) |
Gene overrepresentation in molecular function category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.1 | 2.4 | GO:0016760 | cellulose synthase (UDP-forming) activity(GO:0016760) |
| 0.2 | 1.4 | GO:0004096 | catalase activity(GO:0004096) |
| 0.0 | 1.4 | GO:0051015 | actin filament binding(GO:0051015) |
| 0.1 | 1.0 | GO:0009044 | xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556) |
| 0.0 | 1.0 | GO:0004190 | aspartic-type endopeptidase activity(GO:0004190) |
| 0.1 | 0.7 | GO:0008889 | glycerophosphodiester phosphodiesterase activity(GO:0008889) |
| 0.2 | 0.6 | GO:0010291 | carotene beta-ring hydroxylase activity(GO:0010291) |
| 0.1 | 0.6 | GO:0016756 | glutathione gamma-glutamylcysteinyltransferase activity(GO:0016756) |
| 0.0 | 0.6 | GO:0070290 | phospholipase D activity(GO:0004630) N-acylphosphatidylethanolamine-specific phospholipase D activity(GO:0070290) |
| 0.1 | 0.5 | GO:0004614 | phosphoglucomutase activity(GO:0004614) |
Gene overrepresentation in curated gene sets: REACTOME pathways category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.3 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |