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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G08130

Z-value: 0.92

Transcription factors associated with AT5G08130

Gene Symbol Gene ID Gene Info
AT5G08130
AT5G08130 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
BIM1arTal_v1_Chr5_-_2610123_2610250-0.581.3e-03Click!

Activity profile of AT5G08130 motif

Sorted Z-values of AT5G08130 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_+_3157501 5.49 AT1G09750.1
AT1G09750
Eukaryotic aspartyl protease family protein
Chr1_-_1940463 4.23 AT1G06360.1
AT1G06360.2
AT1G06360
Fatty acid desaturase family protein
Chr3_-_2334185 3.45 AT3G07320.1
AT3G07320
O-Glycosyl hydrolases family 17 protein
Chr2_-_15483706 3.36 AT2G36885.2
AT2G36885.1
AT2G36885
translation initiation factor
Chr2_+_6399621 3.27 AT2G14890.2
AGP9
arabinogalactan protein 9
Chr2_+_6399405 3.08 AT2G14890.1
AGP9
arabinogalactan protein 9
Chr1_-_84864 2.89 AT1G01190.1
AT1G01190.2
CYP78A8
cytochrome P450, family 78, subfamily A, polypeptide 8
Chr4_-_17181261 2.82 AT4G36360.2
BGAL3
beta-galactosidase 3
Chr4_-_17181466 2.80 AT4G36360.1
BGAL3
beta-galactosidase 3
Chr4_-_9157133 2.60 AT4G16155.1
AT4G16155
dihydrolipoamide dehydrogenase
Chr1_-_28551836 2.50 AT1G76090.1
SMT3
sterol methyltransferase 3
Chr3_-_19821505 2.45 AT3G53460.1
AT3G53460.2
AT3G53460.3
AT3G53460.4
CP29
chloroplast RNA-binding protein 29
Chr2_-_9130212 2.40 AT2G21330.3
AT2G21330.2
FBA1
fructose-bisphosphate aldolase 1
Chr2_-_9130619 2.38 AT2G21330.1
FBA1
fructose-bisphosphate aldolase 1
Chr3_+_11252807 2.37 AT3G29320.1
PHS1
Glycosyl transferase, family 35
Chr2_+_19191247 2.32 AT2G46710.1
ROPGAP3
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
Chr4_+_160643 2.30 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr1_-_21418115 2.29 AT1G57820.1
AT1G57820.3
VIM1
Zinc finger (C3HC4-type RING finger) family protein
Chr4_+_12376122 2.28 AT4G23750.1
AT4G23750.2
CRF2
cytokinin response factor 2
Chr5_+_8042853 2.27 AT5G23860.1
AT5G23860.2
TUB8
tubulin beta 8
Chr5_-_5833989 2.25 AT5G17700.2
AT5G17700.1
AT5G17700.3
AT5G17700
MATE efflux family protein
Chr1_-_18690503 2.21 AT1G50450.1
AT1G50450
Saccharopine dehydrogenase
Chr1_-_1169034 2.17 AT1G04360.1
AT1G04360
RING/U-box superfamily protein
Chr5_-_15840678 2.14 AT5G39550.1
VIM3
Zinc finger (C3HC4-type RING finger) family protein
Chr1_+_26439556 2.07 AT1G70210.1
CYCD1%3B1
CYCLIN D1;1
Chr4_+_16022269 2.01 AT4G33220.1
AT4G33220.2
PME44
pectin methylesterase 44
Chr1_+_18542061 2.01 AT1G50040.1
AT1G50040
formin-like protein, putative (DUF1005)
Chr3_-_22881775 1.99 AT3G61820.1
AT3G61820
Eukaryotic aspartyl protease family protein
Chr5_+_25159208 1.99 AT5G62670.1
HA11
H[+]-ATPase 11
Chr4_-_12937236 1.92 AT4G25260.1
AT4G25260
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr1_-_21417937 1.90 AT1G57820.2
VIM1
Zinc finger (C3HC4-type RING finger) family protein
Chr4_-_8240324 1.86 AT4G14310.2
AT4G14310.1
AT4G14310
Transducin/WD40 repeat-like superfamily protein
Chr5_+_18894378 1.86 AT5G46570.1
BSK2
BR-signaling kinase 2
Chr4_-_7883926 1.86 AT4G13560.2
AT4G13560.1
UNE15
Late embryogenesis abundant protein (LEA) family protein
Chr1_-_23251195 1.84 AT1G62780.1
AT1G62780
dimethylallyl, adenosine tRNA methylthiotransferase
Chr4_-_18190556 1.83 AT4G39040.2
AT4G39040.1
AT4G39040
RNA-binding CRS1 / YhbY (CRM) domain protein
Chr3_-_22256177 1.77 AT3G60220.1
ATL4
TOXICOS EN LEVADURA 4
Chr1_-_6940832 1.76 AT1G20010.1
TUB5
tubulin beta-5 chain
Chr4_-_17123855 1.75 AT4G36180.1
AT4G36180
Leucine-rich receptor-like protein kinase family protein
Chr2_+_19109513 1.75 AT2G46535.1
AT2G46535
hypothetical protein
Chr5_+_26281642 1.73 AT5G65700.1
AT5G65700.2
BAM1
Leucine-rich receptor-like protein kinase family protein
Chr4_+_10414428 1.69 AT4G19020.1
AT4G19020.2
CMT2
chromomethylase 2
Chr5_-_442187 1.68 AT5G02220.1
AT5G02220
cyclin-dependent kinase inhibitor
Chr3_-_4782452 1.68 AT3G14330.1
AT3G14330
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_-_23000188 1.67 AT3G62110.2
AT3G62110.1
AT3G62110
Pectin lyase-like superfamily protein
Chr1_+_29871326 1.67 AT1G79420.1
AT1G79420
C-type mannose receptor (DUF620)
Chr4_+_11880080 1.64 AT4G22560.1
AT4G22560
sulfated surface-like glycoprotein
Chr2_-_7984126 1.64 AT2G18380.1
GATA20
GATA transcription factor 20
Chr1_-_25949340 1.63 AT1G69030.1
AT1G69030
BSD domain-containing protein
Chr2_-_8240018 1.55 AT2G18990.1
TXND9
thioredoxin-like/ATP-binding protein
Chr5_-_26845294 1.55 AT5G67280.1
RLK
receptor-like kinase
Chr5_-_26491382 1.54 AT5G66310.3
AT5G66310
ATP binding microtubule motor family protein
Chr4_+_133643 1.54 AT4G00310.1
AT4G00310.2
EDA8
Putative membrane lipoprotein
Chr5_-_16592381 1.53 AT5G41460.1
AT5G41460
transferring glycosyl group transferase (DUF604)
Chr5_-_26490703 1.52 AT5G66310.2
AT5G66310
ATP binding microtubule motor family protein
Chr3_+_23334574 1.51 AT3G63170.1
FAP1
Chalcone-flavanone isomerase family protein
Chr4_+_9906821 1.51 AT4G17810.1
AT4G17810.2
AT4G17810
C2H2 and C2HC zinc fingers superfamily protein
Chr5_-_26491721 1.50 AT5G66310.1
AT5G66310
ATP binding microtubule motor family protein
Chr3_-_7776109 1.49 AT3G22070.1
AT3G22070
proline-rich family protein
Chr1_-_22327359 1.48 AT1G60600.2
AT1G60600.1
ABC4
UbiA prenyltransferase family protein
Chr3_-_21312378 1.47 AT3G57560.1
NAGK
N-acetyl-l-glutamate kinase
Chr4_-_13910995 1.44 AT4G27950.1
CRF4
cytokinin response factor 4
Chr1_+_7233654 1.39 AT1G20816.1
AT1G20816
outer envelope pore-like protein
Chr5_-_26899736 1.39 AT5G67411.1
AT5G67411
GRAS family transcription factor
Chr1_-_23634073 1.36 AT1G63710.1
CYP86A7
cytochrome P450, family 86, subfamily A, polypeptide 7
Chr1_+_12472868 1.35 AT1G34245.1
EPF2
Putative membrane lipoprotein
Chr2_+_13193954 1.35 AT2G31010.2
AT2G31010.1
AT2G31010
Protein kinase superfamily protein
Chr1_-_23812725 1.32 AT1G64150.1
AT1G64150
Uncharacterized protein family (UPF0016)
Chr1_+_22080689 1.30 AT1G59980.1
AT1G59980.2
AT1G59980.3
ARL2
ARG1-like 2
Chr3_+_6632637 1.30 AT3G19180.1
AT3G19180.2
PARC6
plastid division protein
Chr4_-_6796398 1.28 AT4G11140.1
CRF1
cytokinin response factor 1
Chr5_+_25433266 1.23 AT5G63530.2
FP3
farnesylated protein 3
Chr3_+_18155416 1.22 AT3G48980.1
AT3G48980
O-glucosyltransferase rumi-like protein (DUF821)
Chr4_+_9128900 1.22 AT4G16140.1
AT4G16140
proline-rich family protein
Chr3_+_18155087 1.22 AT3G48980.2
AT3G48980
O-glucosyltransferase rumi-like protein (DUF821)
Chr2_-_15084559 1.20 AT2G35930.1
PUB23
plant U-box 23
Chr3_+_22373013 1.20 AT3G60530.1
GATA4
GATA transcription factor 4
Chr5_+_25432890 1.20 AT5G63530.1
FP3
farnesylated protein 3
Chr3_-_1435526 1.19 AT3G05130.1
AT3G05130
paramyosin-like protein
Chr3_-_18215743 1.19 AT3G49140.1
AT3G49140
Pentatricopeptide repeat (PPR) superfamily protein
Chr5_+_8589457 1.18 AT5G24930.1
COL4
zinc finger CONSTANS-like protein
Chr4_-_17530589 1.18 AT4G37250.1
AT4G37250
Leucine-rich repeat protein kinase family protein
Chr2_+_18582697 1.13 AT2G45050.1
GATA2
GATA transcription factor 2
Chr3_-_9148525 1.11 AT3G25110.1
FaTA
fatA acyl-ACP thioesterase
Chr4_+_9128732 1.08 AT4G16140.2
AT4G16140
proline-rich family protein
Chr5_+_15957368 1.08 AT5G39860.1
PRE1
basic helix-loop-helix (bHLH) DNA-binding family protein
Chr3_+_18029659 1.08 AT3G48660.1
AT3G48660
transmembrane protein, putative (DUF 3339)
Chr5_-_23946430 1.06 AT5G59360.1
AT5G59360
hypothetical protein
Chr4_+_12512665 1.05 AT4G24090.1
AT4G24090
homer protein
Chr1_-_19649340 1.04 AT1G52750.1
AT1G52750
alpha/beta-Hydrolases superfamily protein
Chr3_+_139011 1.03 AT3G01370.1
CFM2
CRM family member 2
Chr1_-_29715017 1.02 AT1G78990.1
AT1G78990
HXXXD-type acyl-transferase family protein
Chr4_-_9650846 1.02 AT4G17190.2
AT4G17190.3
AT4G17190.1
FPS2
farnesyl diphosphate synthase 2
Chr3_+_20115212 1.01 AT3G54320.5
AT3G54320.2
WRI1
Integrase-type DNA-binding superfamily protein
Chr5_+_3047011 1.00 AT5G09805.1
IDL3
inflorescence deficient in abscission (IDA)-like 3
Chr2_+_14006135 0.99 AT2G33000.2
AT2G33000.1
AT2G33000
ubiquitin-associated (UBA)/TS-N domain-containing protein-like protein
Chr2_-_11792646 0.99 AT2G27630.1
AT2G27630
Ubiquitin carboxyl-terminal hydrolase-related protein
Chr3_+_8044410 0.98 AT3G22760.2
AT3G22760.1
SOL1
Tesmin/TSO1-like CXC domain-containing protein
Chr3_+_20114684 0.97 AT3G54320.1
WRI1
Integrase-type DNA-binding superfamily protein
Chr2_-_6744835 0.96 AT2G15440.1
AT2G15440
polysaccharide biosynthesis protein (DUF579)
Chr3_+_23142485 0.95 AT3G62570.1
AT3G62570
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_8761419 0.95 AT3G24220.1
NCED6
nine-cis-epoxycarotenoid dioxygenase 6
Chr2_-_368357 0.95 AT2G01830.5
AT2G01830.2
AT2G01830.4
WOL
CHASE domain containing histidine kinase protein
Chr3_+_20114488 0.93 AT3G54320.4
AT3G54320.3
WRI1
Integrase-type DNA-binding superfamily protein
Chr1_+_12323474 0.93 AT1G33930.1
AT1G33930
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_+_25554721 0.93 AT1G68180.1
AT1G68180
RING/U-box superfamily protein
Chr3_-_1127581 0.93 AT3G04260.1
PTAC3
plastid transcriptionally active 3
Chr2_-_16804823 0.92 AT2G40230.1
AT2G40230
HXXXD-type acyl-transferase family protein
Chr2_+_18524311 0.91 AT2G44920.2
AT2G44920.1
AT2G44920
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_-_7781179 0.91 AT1G22060.2
AT1G22060
sporulation-specific protein
Chr2_+_18977344 0.90 AT2G46210.1
SLD2
Fatty acid/sphingolipid desaturase
Chr4_+_17691687 0.90 AT4G37650.1
SHR
GRAS family transcription factor
Chr1_-_25738134 0.90 AT1G68560.1
XYL1
alpha-xylosidase 1
Chr5_+_14959797 0.90 AT5G37660.2
PDLP7
plasmodesmata-located protein 7
Chr5_-_20861403 0.90 AT5G51330.2
SWI1
SWITCH1
Chr1_-_7781539 0.88 AT1G22060.1
AT1G22060
sporulation-specific protein
Chr5_-_20861711 0.88 AT5G51330.1
SWI1
SWITCH1
Chr1_-_1637914 0.87 AT1G05530.1
UGT75B2
UDP-glucosyl transferase 75B2
Chr4_+_532247 0.87 AT4G01270.1
AT4G01270
RING/U-box superfamily protein
Chr3_+_8382672 0.86 AT3G23410.1
FAO3
fatty alcohol oxidase 3
Chr5_-_25928879 0.86 AT5G64860.1
DPE1
disproportionating enzyme
Chr3_+_6805622 0.85 AT3G19590.1
BUB3.1
Transducin/WD40 repeat-like superfamily protein
Chr3_+_1360837 0.85 AT3G04920.2
AT3G04920.1
AT3G04920
Ribosomal protein S24e family protein
Chr3_+_5547492 0.85 AT3G16350.1
AT3G16350
Homeodomain-like superfamily protein
Chr3_+_22033129 0.84 AT3G59650.2
AT3G59650.1
AT3G59650
mitochondrial ribosomal protein L51/S25/CI-B8 family protein
Chr1_-_6172245 0.84 AT1G17940.6
AT1G17940
Endosomal targeting BRO1-like domain-containing protein
Chr1_+_11084666 0.84 AT1G31070.1
AT1G31070.2
GlcNAc1pUT1
N-acetylglucosamine-1-phosphate uridylyltransferase 1
Chr4_-_18472048 0.83 AT4G39800.1
MIPS1
myo-inositol-1-phosphate synthase 1
Chr5_+_14959614 0.83 AT5G37660.1
PDLP7
plasmodesmata-located protein 7
Chr5_+_26749826 0.83 AT5G67020.1
AT5G67020
hypothetical protein
Chr5_-_5271860 0.83 AT5G16140.2
AT5G16140.1
AT5G16140
Peptidyl-tRNA hydrolase family protein
Chr5_-_5604893 0.82 AT5G17030.1
UGT78D3
UDP-glucosyl transferase 78D3
Chr1_+_27127170 0.82 AT1G72100.1
AT1G72100
late embryogenesis abundant domain-containing protein / LEA domain-containing protein
Chr1_+_27402814 0.81 AT1G72820.1
AT1G72820.2
AT1G72820
Mitochondrial substrate carrier family protein
Chr4_+_8736721 0.81 AT4G15310.1
CYP702A3
cytochrome P450, family 702, subfamily A, polypeptide 3
Chr4_-_6751525 0.81 AT4G11050.3
AT4G11050.1
AT4G11050.2
GH9C3
glycosyl hydrolase 9C3
Chr5_+_7168106 0.80 AT5G21100.1
AT5G21100
Plant L-ascorbate oxidase
Chr3_+_8383331 0.80 AT3G23410.2
FAO3
fatty alcohol oxidase 3
Chr1_-_6173025 0.80 AT1G17940.3
AT1G17940.5
AT1G17940
Endosomal targeting BRO1-like domain-containing protein
Chr5_-_24975632 0.77 AT5G62170.1
AT5G62170.2
AT5G62170.4
AT5G62170.3
TRM25
LOW protein: M-phase inducer phosphatase-like protein
Chr5_+_25869845 0.77 AT5G64710.2
AT5G64710
Putative endonuclease or glycosyl hydrolase
Chr1_-_17238185 0.76 AT1G46480.1
AT1G46480.2
WOX4
WUSCHEL related homeobox 4
Chr1_+_29220349 0.76 AT1G77740.1
PIP5K2
phosphatidylinositol-4-phosphate 5-kinase 2
Chr3_-_1725182 0.74 AT3G05790.1
AT3G05790.2
LON4
lon protease 4
Chr1_+_11475623 0.74 AT1G31950.2
AT1G31950.3
AT1G31950
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Chr2_+_8545634 0.74 AT2G19806.1
AT2G19806

Chr3_+_20858742 0.73 AT3G56220.1
AT3G56220.2
AT3G56220
transcription regulator
Chr1_+_29220538 0.73 AT1G77740.2
PIP5K2
phosphatidylinositol-4-phosphate 5-kinase 2
Chr5_+_25869222 0.73 AT5G64710.1
AT5G64710
Putative endonuclease or glycosyl hydrolase
Chr1_-_6173273 0.73 AT1G17940.1
AT1G17940.4
AT1G17940.2
AT1G17940
Endosomal targeting BRO1-like domain-containing protein
Chr1_-_18430497 0.72 AT1G49780.1
PUB26
plant U-box 26
Chr1_+_20091491 0.71 AT1G53820.1
AT1G53820
RING/U-box superfamily protein
Chr3_-_4614848 0.70 AT3G13970.3
AT3G13970.4
AT3G13970.2
AT3G13970.1
APG12B
Ubiquitin-like superfamily protein
Chr1_+_11249600 0.70 AT1G31420.2
AT1G31420.1
AT1G31420.3
FEI1
Leucine-rich repeat protein kinase family protein
Chr5_-_3190321 0.70 AT5G10170.1
MIPS3
myo-inositol-1-phosphate synthase 3
Chr2_-_14338385 0.69 AT2G33870.1
ArRABA1h
RAB GTPase homolog A1H
Chr1_+_27786864 0.69 AT1G73885.1
AT1G73885
AT-rich interactive domain protein
Chr1_-_27031461 0.68 AT1G71866.1
AT1G71866.2
AT1G71866
EPIDERMAL PATTERNING FACTOR-like protein
Chr1_-_30202349 0.68 AT1G80340.1
GA3OX2
gibberellin 3-oxidase 2
Chr1_-_7930657 0.67 AT1G22460.1
AT1G22460
O-fucosyltransferase family protein
Chr1_+_11475807 0.67 AT1G31950.1
AT1G31950
Terpenoid cyclases/Protein prenyltransferases superfamily protein
Chr1_-_28625408 0.67 AT1G76290.1
AT1G76290
AMP-dependent synthetase and ligase family protein
Chr4_+_9371927 0.66 AT4G16650.1
AT4G16650
O-fucosyltransferase family protein
Chr4_+_9372379 0.66 AT4G16650.2
AT4G16650
O-fucosyltransferase family protein
Chr3_-_6738386 0.66 AT3G19430.1
AT3G19430.2
AT3G19430
late embryogenesis abundant protein-related / LEA protein-like protein
Chr4_-_8711526 0.66 AT4G15250.1
BBX9
B-box type zinc finger protein with CCT domain-containing protein
Chr5_+_21607410 0.65 AT5G53280.1
PDV1
plastid division1
Chr2_-_8045008 0.63 AT2G18540.1
AT2G18540.2
AT2G18540
RmlC-like cupins superfamily protein
Chr4_+_14333528 0.63 AT4G29090.1
AT4G29090
Ribonuclease H-like superfamily protein
Chr5_-_9011618 0.63 AT5G25840.1
AT5G25840
DUF1677 family protein (DUF1677)
Chr1_-_13456336 0.62 AT1G36060.1
AT1G36060
Integrase-type DNA-binding superfamily protein
Chr2_-_367696 0.62 AT2G01830.6
WOL
CHASE domain containing histidine kinase protein
Chr3_+_1572718 0.61 AT3G05440.1
AT3G05440
C2 domain-containing protein
Chr2_+_18791289 0.61 AT2G45610.1
AT2G45610
alpha/beta-Hydrolases superfamily protein
Chr5_-_6313372 0.61 AT5G18930.1
BUD2
Adenosylmethionine decarboxylase family protein
Chr2_-_367977 0.60 AT2G01830.1
WOL
CHASE domain containing histidine kinase protein
Chr1_+_5543119 0.60 AT1G16190.1
AT1G16190.2
RAD23A
Rad23 UV excision repair protein family
Chr4_-_16211426 0.60 AT4G33800.2
AT4G33800.1
AT4G33800
hypothetical protein
Chr3_+_6174239 0.58 AT3G18040.3
AT3G18040.4
MPK9
MAP kinase 9
Chr1_+_29741728 0.58 AT1G79060.1
AT1G79060
TPRXL
Chr2_+_12119285 0.58 AT2G28355.1
LCR5
low-molecular-weight cysteine-rich 5
Chr3_+_5825289 0.58 AT3G17080.1
AT3G17080
Plant self-incompatibility protein S1 family
Chr2_-_16846194 0.58 AT2G40330.1
PYL6
PYR1-like 6
Chr1_-_14172040 0.57 AT1G37140.1
AT1G37140.2
MCT1
MEI2 C-terminal RRM only like 1
Chr4_-_17815084 0.57 AT4G37890.1
AT4G37890.2
EDA40
Zinc finger (C3HC4-type RING finger) family protein
Chr1_-_24196320 0.57 AT1G65120.2
AT1G65120.1
AT1G65120
Ubiquitin carboxyl-terminal hydrolase-related protein
Chr2_-_14320555 0.57 AT2G33847.2
AT2G33847
hypothetical protein
Chr2_-_369707 0.57 AT2G01830.3
WOL
CHASE domain containing histidine kinase protein
Chr1_+_10960908 0.56 AT1G30825.1
DIS2
Arp2/3 complex, 34 kD subunit p34-Arc
Chr3_+_907384 0.56 AT3G03680.1
AT3G03680
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
Chr3_+_19474945 0.56 AT3G52525.1
OFP6
ovate family protein 6
Chr1_+_25053673 0.55 AT1G67100.1
LBD40
LOB domain-containing protein 40
Chr5_-_1792634 0.55 AT5G05965.1
AT5G05965
cell wall RBR3-like protein
Chr2_-_15841850 0.54 AT2G37800.1
AT2G37800
cysteine/histidine-rich C1 domain protein
Chr1_+_30130218 0.54 AT1G80090.1
AT1G80090.2
CBSX4
Cystathionine beta-synthase (CBS) family protein
Chr2_+_11897942 0.52 AT2G27940.1
AT2G27940
RING/U-box superfamily protein
Chr2_-_14320714 0.52 AT2G33847.1
AT2G33847
hypothetical protein
Chr3_-_2306615 0.52 AT3G07250.1
AT3G07250
RNA-binding (RRM-RBD-RNP motif) domain nuclear transport factor 2 family protein
Chr2_+_15917032 0.51 AT2G38040.1
AT2G38040.2
CAC3
acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit
Chr2_-_257568 0.51 AT2G01570.1
RGA1
GRAS family transcription factor family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G08130

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.6 6.3 GO:0090308 regulation of methylation-dependent chromatin silencing(GO:0090308) positive regulation of methylation-dependent chromatin silencing(GO:0090309)
1.0 2.9 GO:0006110 regulation of glycolytic process(GO:0006110) regulation of nucleotide catabolic process(GO:0030811) regulation of carbohydrate catabolic process(GO:0043470) regulation of cellular carbohydrate catabolic process(GO:0043471)
0.5 2.7 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.5 2.4 GO:0005980 glycogen catabolic process(GO:0005980)
0.4 1.7 GO:0010480 microsporocyte differentiation(GO:0010480)
0.4 1.5 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.3 2.4 GO:0043489 RNA stabilization(GO:0043489)
0.3 1.7 GO:0090116 C-5 methylation of cytosine(GO:0090116)
0.3 0.8 GO:0006659 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.3 0.8 GO:0050687 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.3 4.8 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.2 0.9 GO:0009660 amyloplast organization(GO:0009660)
0.2 0.9 GO:0000023 maltose metabolic process(GO:0000023)
0.2 1.5 GO:0010236 photosynthetic electron transport in photosystem II(GO:0009772) plastoquinone biosynthetic process(GO:0010236)
0.2 0.6 GO:0046499 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.2 1.0 GO:0000085 mitotic G1 phase(GO:0000080) mitotic S phase(GO:0000084) mitotic G2 phase(GO:0000085) G1 phase(GO:0051318) G2 phase(GO:0051319) S phase(GO:0051320) interphase(GO:0051325) mitotic interphase(GO:0051329)
0.2 0.5 GO:0009747 hexokinase-dependent signaling(GO:0009747)
0.2 4.2 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.1 1.8 GO:0007143 female meiotic division(GO:0007143)
0.1 1.0 GO:0033383 geranyl diphosphate metabolic process(GO:0033383) geranyl diphosphate biosynthetic process(GO:0033384)
0.1 2.6 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.1 0.7 GO:0006021 inositol biosynthetic process(GO:0006021)
0.1 0.8 GO:0010067 procambium histogenesis(GO:0010067)
0.1 0.9 GO:0016121 carotene catabolic process(GO:0016121) terpene catabolic process(GO:0046247)
0.1 1.3 GO:2000122 negative regulation of stomatal complex development(GO:2000122)
0.1 0.5 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.1 1.4 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.1 0.5 GO:0019419 sulfate reduction(GO:0019419)
0.1 0.3 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.1 1.9 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.1 5.0 GO:0048825 cotyledon development(GO:0048825)
0.1 0.9 GO:1902100 mitotic spindle assembly checkpoint(GO:0007094) spindle checkpoint(GO:0031577) negative regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032435) negative regulation of sister chromatid segregation(GO:0033046) negative regulation of mitotic sister chromatid segregation(GO:0033048) negative regulation of mitotic metaphase/anaphase transition(GO:0045841) negative regulation of chromosome segregation(GO:0051985) spindle assembly checkpoint(GO:0071173) mitotic spindle checkpoint(GO:0071174) negative regulation of proteasomal protein catabolic process(GO:1901799) negative regulation of metaphase/anaphase transition of cell cycle(GO:1902100) negative regulation of proteolysis involved in cellular protein catabolic process(GO:1903051) negative regulation of cellular protein catabolic process(GO:1903363) negative regulation of mitotic sister chromatid separation(GO:2000816)
0.1 1.2 GO:0032922 circadian regulation of gene expression(GO:0032922)
0.1 5.7 GO:0009627 systemic acquired resistance(GO:0009627)
0.1 0.4 GO:1901562 response to paraquat(GO:1901562)
0.1 0.7 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.1 0.3 GO:0010424 DNA methylation on cytosine within a CG sequence(GO:0010424)
0.1 2.3 GO:0030641 regulation of cellular pH(GO:0030641) regulation of intracellular pH(GO:0051453)
0.1 4.6 GO:0007018 microtubule-based movement(GO:0007018)
0.1 0.5 GO:0033206 meiotic cytokinesis(GO:0033206)
0.1 1.4 GO:0044070 regulation of anion transport(GO:0044070)
0.1 0.3 GO:0080121 AMP transport(GO:0080121)
0.1 0.2 GO:0002184 cytoplasmic translational termination(GO:0002184)
0.1 1.0 GO:0000373 Group II intron splicing(GO:0000373)
0.0 1.9 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.7 GO:0051865 protein autoubiquitination(GO:0051865)
0.0 0.9 GO:0045493 xylan catabolic process(GO:0045493)
0.0 0.4 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.0 0.6 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.0 1.3 GO:0009686 gibberellin biosynthetic process(GO:0009686)
0.0 0.9 GO:0030148 sphingolipid biosynthetic process(GO:0030148)
0.0 1.0 GO:0010227 floral organ abscission(GO:0010227)
0.0 0.4 GO:0080086 stamen filament development(GO:0080086)
0.0 0.4 GO:0015914 phospholipid transport(GO:0015914)
0.0 0.2 GO:0010344 seed oilbody biogenesis(GO:0010344)
0.0 0.8 GO:0010187 negative regulation of seed germination(GO:0010187)
0.0 0.8 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.0 4.0 GO:0000226 microtubule cytoskeleton organization(GO:0000226)
0.0 1.9 GO:0009566 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.0 6.3 GO:0006631 fatty acid metabolic process(GO:0006631)
0.0 0.8 GO:0032543 mitochondrial translation(GO:0032543)
0.0 1.0 GO:0045492 xylan biosynthetic process(GO:0045492)
0.0 2.5 GO:0009741 response to brassinosteroid(GO:0009741)
0.0 0.1 GO:0097576 regulation of vacuole fusion, non-autophagic(GO:0032889) vacuole fusion, non-autophagic(GO:0042144) vacuole fusion(GO:0097576)
0.0 0.6 GO:0034314 Arp2/3 complex-mediated actin nucleation(GO:0034314)
0.0 3.0 GO:0009664 plant-type cell wall organization(GO:0009664)
0.0 0.4 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.4 GO:1901071 glucosamine-containing compound metabolic process(GO:1901071)
0.0 0.1 GO:0009855 determination of bilateral symmetry(GO:0009855)
0.0 0.2 GO:0010161 red light signaling pathway(GO:0010161)
0.0 0.5 GO:0010183 chemotaxis(GO:0006935) pollen tube guidance(GO:0010183) taxis(GO:0042330) positive chemotaxis(GO:0050918)
0.0 1.5 GO:0009561 megagametogenesis(GO:0009561)
0.0 0.4 GO:0006298 mismatch repair(GO:0006298)
0.0 0.2 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.0 0.5 GO:0071472 cellular response to salt stress(GO:0071472)
0.0 0.6 GO:0006289 nucleotide-excision repair(GO:0006289)
0.0 0.2 GO:0001709 cell fate determination(GO:0001709)
0.0 0.3 GO:0000162 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.0 0.1 GO:0006048 UDP-N-acetylglucosamine metabolic process(GO:0006047) UDP-N-acetylglucosamine biosynthetic process(GO:0006048) amino sugar biosynthetic process(GO:0046349)
0.0 0.9 GO:0016579 protein deubiquitination(GO:0016579)
0.0 0.2 GO:0019915 lipid storage(GO:0019915)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 6.6 GO:0005720 nuclear heterochromatin(GO:0005720)
0.3 4.0 GO:0045298 tubulin complex(GO:0045298)
0.3 0.9 GO:1990298 bub1-bub3 complex(GO:1990298)
0.1 2.3 GO:0009531 secondary cell wall(GO:0009531)
0.1 0.5 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.1 0.5 GO:0034426 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.1 0.8 GO:0030139 endocytic vesicle(GO:0030139)
0.1 5.7 GO:0031977 thylakoid lumen(GO:0031977)
0.1 0.4 GO:0044545 NSL complex(GO:0044545)
0.1 0.4 GO:0009360 DNA polymerase III complex(GO:0009360)
0.1 0.2 GO:0018444 translation release factor complex(GO:0018444)
0.0 0.2 GO:0005655 nucleolar ribonuclease P complex(GO:0005655) multimeric ribonuclease P complex(GO:0030681)
0.0 8.8 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.9 GO:0009508 plastid chromosome(GO:0009508)
0.0 5.1 GO:0099503 secretory vesicle(GO:0099503)
0.0 0.6 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 0.4 GO:0032300 mismatch repair complex(GO:0032300)
0.0 0.8 GO:0005762 mitochondrial large ribosomal subunit(GO:0005762)
0.0 9.5 GO:0031225 anchored component of membrane(GO:0031225)
0.0 0.1 GO:0000015 phosphopyruvate hydratase complex(GO:0000015)
0.0 0.5 GO:0042644 chloroplast nucleoid(GO:0042644)
0.0 1.3 GO:0009528 plastid inner membrane(GO:0009528)
0.0 6.9 GO:0009534 chloroplast thylakoid(GO:0009534)
0.0 10.0 GO:0009532 plastid stroma(GO:0009532)
0.0 0.4 GO:0012511 monolayer-surrounded lipid storage body(GO:0012511)
0.0 0.2 GO:0009986 cell surface(GO:0009986)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 3.7 GO:0070330 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.8 2.5 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.7 6.6 GO:0010428 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.7 2.7 GO:0009784 transmembrane receptor histidine kinase activity(GO:0009784) transmembrane histidine kinase cytokinin receptor activity(GO:0009885)
0.6 2.4 GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity(GO:0008703)
0.5 2.6 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.5 4.2 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.4 1.5 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.3 4.8 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.3 1.6 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.3 0.9 GO:0004134 4-alpha-glucanotransferase activity(GO:0004134)
0.2 1.0 GO:0004181 metallocarboxypeptidase activity(GO:0004181)
0.2 5.5 GO:0004565 beta-galactosidase activity(GO:0004565)
0.2 0.9 GO:0047215 indole-3-acetate beta-glucosyltransferase activity(GO:0047215)
0.2 0.6 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.2 0.7 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.2 1.7 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.2 1.5 GO:0016872 intramolecular lyase activity(GO:0016872)
0.1 1.5 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.1 1.5 GO:0016161 beta-amylase activity(GO:0016161)
0.1 4.6 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 0.9 GO:0045549 9-cis-epoxycarotenoid dioxygenase activity(GO:0045549)
0.1 1.5 GO:0016774 phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.1 0.4 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.1 1.5 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 0.8 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.1 1.0 GO:0004337 geranyltranstransferase activity(GO:0004337)
0.1 0.5 GO:0022829 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.1 1.1 GO:0051192 ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process(GO:0000036) ACP phosphopantetheine attachment site binding(GO:0044620) prosthetic group binding(GO:0051192)
0.1 0.4 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.1 2.4 GO:0008266 poly(U) RNA binding(GO:0008266)
0.1 0.3 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.1 0.9 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044) alpha-L-arabinofuranosidase activity(GO:0046556)
0.1 1.6 GO:0010333 terpene synthase activity(GO:0010333)
0.1 0.5 GO:0003989 acetyl-CoA carboxylase activity(GO:0003989)
0.1 4.6 GO:0003777 microtubule motor activity(GO:0003777)
0.1 0.4 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.1 0.3 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.1 0.3 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.1 0.3 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 0.2 GO:1990825 sequence-specific mRNA binding(GO:1990825)
0.0 0.6 GO:0070628 proteasome binding(GO:0070628)
0.0 0.4 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.0 0.1 GO:0004634 phosphopyruvate hydratase activity(GO:0004634)
0.0 4.1 GO:0019900 kinase binding(GO:0019900)
0.0 1.8 GO:0031625 ubiquitin protein ligase binding(GO:0031625)
0.0 1.2 GO:0004707 MAP kinase activity(GO:0004707)
0.0 2.0 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.0 0.8 GO:0008810 cellulase activity(GO:0008810)
0.0 0.6 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.0 1.1 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.0 0.4 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.0 0.4 GO:0030983 mismatched DNA binding(GO:0030983)
0.0 1.7 GO:0004650 polygalacturonase activity(GO:0004650)
0.0 0.8 GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor(GO:0016682)
0.0 1.3 GO:0043621 protein self-association(GO:0043621)
0.0 1.1 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.8 GO:0005347 ATP transmembrane transporter activity(GO:0005347)
0.0 0.9 GO:0043130 ubiquitin binding(GO:0043130)
0.0 0.1 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.0 0.6 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.9 GO:0004843 thiol-dependent ubiquitin-specific protease activity(GO:0004843) thiol-dependent ubiquitinyl hydrolase activity(GO:0036459)
0.0 0.4 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 0.6 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 1.2 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.2 1.0 PID HDAC CLASSII PATHWAY Signaling events mediated by HDAC Class II

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.2 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.1 1.1 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.0 0.4 REACTOME MEIOTIC RECOMBINATION Genes involved in Meiotic Recombination