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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G06839

Z-value: 0.65

Transcription factors associated with AT5G06839

Gene Symbol Gene ID Gene Info
AT5G06839
AT5G06839 bZIP transcription factor family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
TGA10arTal_v1_Chr5_+_2120472_21205270.543.0e-03Click!

Activity profile of AT5G06839 motif

Sorted Z-values of AT5G06839 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_-_9131779 3.85 AT1G26390.1
AT1G26390
FAD-binding Berberine family protein
Chr4_+_6491017 3.18 AT4G10500.1
AT4G10500
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr5_-_6042938 2.99 AT5G18270.2
AT5G18270.1
ANAC087
NAC domain containing protein 87
Chr2_+_6213972 2.83 AT2G14560.2
AT2G14560.1
LURP1
LURP-one-like protein (DUF567)
Chr2_+_6213617 2.77 AT2G14560.3
AT2G14560.4
LURP1
LURP-one-like protein (DUF567)
Chr3_-_7999552 2.60 AT3G22560.1
AT3G22560
Acyl-CoA N-acyltransferases (NAT) superfamily protein
Chr3_-_1055196 2.51 AT3G04060.1
NAC046
NAC domain containing protein 46
Chr1_+_5389952 2.49 AT1G15670.1
AT1G15670
Galactose oxidase/kelch repeat superfamily protein
Chr4_-_2234689 2.40 AT4G04490.1
CRK36
cysteine-rich RLK (RECEPTOR-like protein kinase) 36
Chr4_-_9368852 2.32 AT4G16640.1
AT4G16640
Matrixin family protein
Chr1_+_26651840 2.31 AT1G70690.1
HWI1
Receptor-like protein kinase-related family protein
Chr5_+_1672070 2.28 AT5G05600.1
AT5G05600.2
AT5G05600
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr1_+_21652988 2.26 AT1G58340.1
ZF14
MATE efflux family protein
Chr1_-_3756998 2.09 AT1G11210.1
AT1G11210
cotton fiber protein, putative (DUF761)
Chr3_-_9471039 2.09 AT3G25882.1
NIMIN-2
NIM1-interacting 2
Chr2_-_11233295 2.02 AT2G26400.1
AT2G26400.4
AT2G26400.2
AT2G26400.3
ARD3
acireductone dioxygenase 3
Chr2_+_18577500 1.97 AT2G45040.1
AT2G45040
Matrixin family protein
Chr5_-_5862462 1.97 AT5G17760.2
AT5G17760.1
AT5G17760
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr4_-_8095749 1.91 AT4G14020.1
AT4G14020
Rapid alkalinization factor (RALF) family protein
Chr5_-_24836933 1.88 AT5G61820.1
AT5G61820.2
AT5G61820
stress up-regulated Nod 19 protein
Chr2_-_12618899 1.85 AT2G29420.1
GSTU7
glutathione S-transferase tau 7
Chr5_+_20090648 1.71 AT5G49520.1
WRKY48
WRKY DNA-binding protein 48
Chr3_-_21303230 1.70 AT3G57540.1
AT3G57540
Remorin family protein
Chr5_+_25908247 1.70 AT5G64810.1
WRKY51
WRKY DNA-binding protein 51
Chr2_-_17002528 1.61 AT2G40750.1
WRKY54
WRKY DNA-binding protein 54
Chr5_+_8082650 1.59 AT5G23950.2
AT5G23950.1
AT5G23950
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr3_-_17976774 1.56 AT3G48520.1
CYP94B3
cytochrome P450, family 94, subfamily B, polypeptide 3
Chr5_-_8186662 1.56 AT5G24160.2
AT5G24160.1
SQE6
squalene monooxygenase 6
Chr5_-_16998925 1.54 AT5G42510.1
AT5G42510
Disease resistance-responsive (dirigent-like protein) family protein
Chr1_-_22360149 1.52 AT1G60730.2
AT1G60730.3
AT1G60730.1
AT1G60730
NAD(P)-linked oxidoreductase superfamily protein
Chr4_-_12416691 1.51 AT4G23880.1
AT4G23880
hypothetical protein
Chr3_-_18373147 1.51 AT3G49570.1
LSU3
response to low sulfur 3
Chr4_-_9421857 1.50 AT4G16750.1
AT4G16750
Integrase-type DNA-binding superfamily protein
Chr3_-_6804114 1.48 AT3G19580.2
ZF2
zinc-finger protein 2
Chr1_-_498539 1.47 AT1G02450.1
NIMIN1
NIM1-interacting 1
Chr5_+_23346876 1.47 AT5G57655.1
AT5G57655
xylose isomerase family protein
Chr5_+_23346675 1.46 AT5G57655.2
AT5G57655
xylose isomerase family protein
Chr3_-_6804296 1.45 AT3G19580.1
ZF2
zinc-finger protein 2
Chr1_+_5638779 1.44 AT1G16500.1
AT1G16500
filamentous hemagglutinin transporter
Chr4_+_14348637 1.42 AT4G29110.1
AT4G29110
cotton fiber protein
Chr4_-_17041131 1.42 AT4G36010.2
AT4G36010
Pathogenesis-related thaumatin superfamily protein
Chr5_+_6061298 1.41 AT5G18310.2
AT5G18310.1
AT5G18310.3
AT5G18310
ubiquitin hydrolase
Chr5_-_8186100 1.40 AT5G24160.3
SQE6
squalene monooxygenase 6
Chr4_-_17041326 1.40 AT4G36010.1
AT4G36010
Pathogenesis-related thaumatin superfamily protein
Chr2_-_16780368 1.39 AT2G40170.1
GEA6
Stress induced protein
Chr1_-_25442876 1.37 AT1G67855.1
AT1G67855
hypothetical protein
Chr2_+_19000180 1.36 AT2G46270.2
AT2G46270.1
AT2G46270.4
AT2G46270.3
GBF3
G-box binding factor 3
Chr5_-_5581311 1.36 AT5G16980.2
AT5G16980.1
AT5G16980
Zinc-binding dehydrogenase family protein
Chr3_-_21008064 1.36 AT3G56710.1
AT3G56710.2
SIB1
sigma factor binding protein 1
Chr1_+_29099839 1.33 AT1G77450.1
NAC032
NAC domain containing protein 32
Chr1_-_28251469 1.32 AT1G75270.1
DHAR2
dehydroascorbate reductase 2
Chr1_-_1547798 1.31 AT1G05300.2
AT1G05300.1
ZIP5
zinc transporter 5 precursor
Chr1_-_18680300 1.31 AT1G50420.1
SCL3
scarecrow-like 3
Chr1_-_436922 1.31 AT1G02230.1
NAC004
NAC domain containing protein 4
Chr5_-_7496990 1.30 AT5G22570.1
WRKY38
WRKY DNA-binding protein 38
Chr3_+_5471735 1.29 AT3G16150.1
ASPGB1
N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
Chr3_+_2161735 1.28 AT3G06860.1
MFP2
multifunctional protein 2
Chr2_-_8447355 1.28 AT2G19500.1
CKX2
cytokinin oxidase 2
Chr4_+_8713689 1.26 AT4G15260.1
AT4G15260
UDP-Glycosyltransferase superfamily protein
Chr5_-_3845711 1.25 AT5G11930.1
AT5G11930
Thioredoxin superfamily protein
Chr5_+_20192159 1.24 AT5G49700.1
AT5G49700
Putative AT-hook DNA-binding family protein
Chr5_+_6061632 1.23 AT5G18310.4
AT5G18310
ubiquitin hydrolase
Chr1_+_26423874 1.23 AT1G70170.1
MMP
matrix metalloproteinase
Chr3_-_20606650 1.22 AT3G55560.1
AGF2
AT-hook protein of GA feedback 2
Chr5_-_5578086 1.20 AT5G16970.1
AER
alkenal reductase
Chr2_-_10672892 1.19 AT2G25090.1
CIPK16
CBL-interacting protein kinase 16
Chr5_-_5580951 1.11 AT5G16980.3
AT5G16980
Zinc-binding dehydrogenase family protein
Chr5_-_2860558 1.09 AT5G08790.1
ATAF2
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr1_-_8912642 1.08 AT1G25400.2
AT1G25400
transmembrane protein
Chr1_-_8912822 1.07 AT1G25400.1
AT1G25400
transmembrane protein
Chr1_+_9951762 1.07 AT1G28360.1
ERF12
ERF domain protein 12
Chr4_+_1306313 1.06 AT4G02940.1
AT4G02940
oxidoreductase, 2OG-Fe(II) oxygenase family protein
Chr3_+_4544364 1.05 AT3G13810.5
AT3G13810.3
AT3G13810.4
AT3G13810.6
AT3G13810.2
AT3G13810.1
IDD11
indeterminate(ID)-domain 11
Chr3_-_19427230 1.04 AT3G52400.1
SYP122
syntaxin of plants 122
Chr3_+_5047376 1.03 AT3G14990.1
AT3G14990.3
DJ1A
Class I glutamine amidotransferase-like superfamily protein
Chr1_+_10654800 1.03 AT1G30270.1
AT1G30270.2
AT1G30270.3
CIPK23
CBL-interacting protein kinase 23
Chr1_+_27397089 1.03 AT1G72800.1
AT1G72800
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr2_-_9564850 1.00 AT2G22500.1
UCP5
uncoupling protein 5
Chr3_+_5047589 0.98 AT3G14990.2
DJ1A
Class I glutamine amidotransferase-like superfamily protein
Chr5_-_19172956 0.96 AT5G47220.1
ERF2
ethylene responsive element binding factor 2
Chr5_-_5358789 0.96 AT5G16370.1
AAE5
acyl activating enzyme 5
Chr4_-_7011406 0.95 AT4G11600.1
GPX6
glutathione peroxidase 6
Chr5_+_3509833 0.94 AT5G11060.1
KNAT4
homeobox protein knotted-1-like 4
Chr1_-_10203491 0.93 AT1G29195.1
AT1G29195
phosphatidylinositol 4-phosphate 5-kinase MSS4-like protein
Chr4_-_8717833 0.93 AT4G15270.2
AT4G15270.1
AT4G15270.3
AT4G15270
glucosyltransferase-like protein
Chr5_+_4615163 0.91 AT5G14310.1
CXE16
carboxyesterase 16
Chr5_-_26920179 0.91 AT5G67450.1
ZF1
zinc-finger protein 1
Chr1_-_29780876 0.90 AT1G79160.1
AT1G79160
filamentous hemagglutinin transporter
Chr5_+_4756057 0.90 AT5G14730.1
AT5G14730
hypothetical protein
Chr5_-_19291103 0.89 AT5G47560.1
TDT
tonoplast dicarboxylate transporter
Chr5_+_8378759 0.89 AT5G24530.1
DMR6
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr2_-_16235234 0.88 AT2G38860.3
AT2G38860.1
AT2G38860.2
YLS5
Class I glutamine amidotransferase-like superfamily protein
Chr3_-_17739870 0.88 AT3G48050.2
AT3G48050.1
SUO
protein SUO
Chr1_+_267993 0.87 AT1G01720.1
ATAF1
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr3_+_961997 0.87 AT3G03790.1
AT3G03790.3
AT3G03790
ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein
Chr5_-_23700226 0.86 AT5G58650.1
PSY1
plant peptide containing sulfated tyrosine 1
Chr2_+_16452612 0.86 AT2G39400.2
AT2G39400.1
AT2G39400
alpha/beta-Hydrolases superfamily protein
Chr5_-_7884360 0.86 AT5G23405.3
AT5G23405.1
AT5G23405
HMG-box (high mobility group) DNA-binding family protein
Chr2_+_15257418 0.85 AT2G36380.1
ABCG34
pleiotropic drug resistance 6
Chr5_-_5689947 0.84 AT5G17290.1
APG5
autophagy protein Apg5 family
Chr5_+_26926551 0.83 AT5G67470.1
FH6
formin homolog 6
Chr4_+_923122 0.82 AT4G02090.1
AT4G02090
multidrug resistance protein ABC transporter family protein
Chr4_-_16740601 0.81 AT4G35180.2
AT4G35180.1
LHT7
LYS/HIS transporter 7
Chr4_-_11003010 0.81 AT4G20370.1
TSF
PEBP (phosphatidylethanolamine-binding protein) family protein
Chr3_+_961750 0.81 AT3G03790.2
AT3G03790
ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein
Chr2_-_9173490 0.80 AT2G21430.1
AT2G21430
Papain family cysteine protease
Chr4_-_2778839 0.79 AT4G05497.1
AT4G05497
RNI-like superfamily protein
Chr3_-_6617951 0.79 AT3G19150.3
AT3G19150.1
KRP6
KIP-related protein 6
Chr4_+_8719022 0.79 AT4G15280.2
AT4G15280.1
UGT71B5
UDP-glucosyl transferase 71B5
Chr3_-_22907958 0.78 AT3G61880.1
AT3G61880.2
CYP78A9
cytochrome p450 78a9
Chr5_+_6015035 0.73 AT5G18200.1
AT5G18200
putative galactose-1-phosphate uridyltransferase
Chr3_-_22651598 0.73 AT3G61190.2
AT3G61190.1
BAP1
BON association protein 1
Chr1_+_2882491 0.73 AT1G08970.2
AT1G08970.1
AT1G08970.3
AT1G08970.4
NF-YC9
nuclear factor Y, subunit C9
Chr5_+_21639216 0.72 AT5G53330.1
AT5G53330
Ubiquitin-associated/translation elongation factor EF1B protein
Chr1_-_26591715 0.72 AT1G70530.2
AT1G70530.3
AT1G70530.1
CRK3
cysteine-rich RLK (RECEPTOR-like protein kinase) 3
Chr5_+_18228768 0.72 AT5G45110.1
AT5G45110.2
NPR3
NPR1-like protein 3
Chr5_-_19358125 0.71 AT5G47810.1
PFK2
phosphofructokinase 2
Chr1_+_30400631 0.71 AT1G80910.1
AT1G80910
vacuolar fusion CCZ1-like protein (DUF1712)
Chr3_-_19312281 0.71 AT3G52060.1
AT3G52060
core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Chr1_+_7612834 0.70 AT1G21680.1
AT1G21680
DPP6 N-terminal domain-like protein
Chr3_+_2749908 0.70 AT3G09010.1
AT3G09010.2
AT3G09010
Protein kinase superfamily protein
Chr1_-_5098270 0.69 AT1G14790.1
RDR1
RNA-dependent RNA polymerase 1
Chr3_+_3674282 0.68 AT3G11640.1
AT3G11640.2
AT3G11640
transmembrane protein
Chr5_-_25528013 0.68 AT5G63790.1
NAC102
NAC domain containing protein 102
Chr4_-_13729002 0.68 AT4G27450.1
AT4G27450
aluminum induced protein with YGL and LRDR motifs
Chr5_+_17324909 0.67 AT5G43150.1
AT5G43150
elongation factor
Chr5_-_25528281 0.67 AT5G63790.2
NAC102
NAC domain containing protein 102
Chr4_+_16635504 0.66 AT4G34920.1
AT4G34920
PLC-like phosphodiesterases superfamily protein
Chr3_-_7463525 0.66 AT3G21250.1
AT3G21250.6
AT3G21250.5
AT3G21250.3
AT3G21250.2
AT3G21250.4
ABCC8
multidrug resistance-associated protein 6
Chr5_-_3824236 0.65 AT5G11860.5
AT5G11860.2
AT5G11860.1
AT5G11860.3
SSP5
SCP1-like small phosphatase 5
Chr4_+_17592996 0.65 AT4G37420.1
AT4G37420
glycosyltransferase family protein (DUF23)
Chr5_-_7884662 0.64 AT5G23405.2
AT5G23405
HMG-box (high mobility group) DNA-binding family protein
Chr3_-_6617677 0.63 AT3G19150.2
KRP6
KIP-related protein 6
Chr4_-_17687105 0.63 AT4G37640.1
ACA2
calcium ATPase 2
Chr2_-_13137004 0.62 AT2G30840.3
AT2G30840.1
AT2G30840.2
AT2G30840
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr3_+_8087238 0.60 AT3G22845.1
AT3G22845.2
AT3G22845
emp24/gp25L/p24 family/GOLD family protein
Chr3_+_5111873 0.60 AT3G15180.1
AT3G15180.2
AT3G15180
ARM repeat superfamily protein
Chr2_+_9645270 0.59 AT2G22680.1
WAVH1
Zinc finger (C3HC4-type RING finger) family protein
Chr3_+_358916 0.59 AT3G02065.2
AT3G02065.1
AT3G02065.3
AT3G02065
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_-_7366799 0.58 AT5G22250.1
CAF1b
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr1_-_18456619 0.58 AT1G49850.1
AT1G49850
RING/U-box superfamily protein
Chr5_+_23187840 0.57 AT5G57220.1
CYP81F2
cytochrome P450, family 81, subfamily F, polypeptide 2
Chr3_+_11973971 0.56 AT3G30380.2
AT3G30380.1
AT3G30380
alpha/beta-Hydrolases superfamily protein
Chr1_+_9829261 0.56 AT1G28135.1
AT1G28135
hypothetical protein
Chr5_-_26966010 0.55 AT5G67620.1
AT5G67620
DUF4228 domain protein
Chr5_-_352095 0.54 AT5G01900.1
WRKY62
WRKY DNA-binding protein 62
Chr3_+_2879353 0.54 AT3G09370.3
AT3G09370.1
AT3G09370.2
MYB3R-3
myb domain protein 3r-3
Chr2_-_9369448 0.54 AT2G22010.1
AT2G22010.2
RKP
related to KPC1
Chr5_-_4639835 0.54 AT5G14390.1
AT5G14390
alpha/beta-Hydrolases superfamily protein
Chr5_+_14978566 0.54 AT5G37710.2
AT5G37710.1
AT5G37710
alpha/beta-Hydrolases superfamily protein
Chr3_-_3477900 0.53 AT3G11100.1
AT3G11100
sequence-specific DNA binding transcription factor
Chr3_-_21036166 0.52 AT3G56800.1
CAM3
calmodulin 3
Chr2_-_18556669 0.51 AT2G44980.2
AT2G44980.1
AT2G44980.3
ASG3
SNF2 domain-containing protein / helicase domain-containing protein
Chr2_+_19537090 0.50 AT2G47640.3
AT2G47640.2
AT2G47640.1
AT2G47640.4
AT2G47640
Small nuclear ribonucleoprotein family protein
Chr3_+_9195334 0.49 AT3G25250.1
AGC2-1
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
Chr5_-_26702702 0.49 AT5G66860.1
AT5G66860
Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein
Chr4_-_14040931 0.48 AT4G28380.1
AT4G28380
Leucine-rich repeat (LRR) family protein
Chr5_+_21069495 0.48 AT5G51830.2
AT5G51830
pfkB-like carbohydrate kinase family protein
Chr3_+_812396 0.47 AT3G03420.1
AT3G03420.2
AT3G03420
Ku70-binding family protein
Chr4_+_14444553 0.46 AT4G29330.1
AT4G29330.2
DER1
DERLIN-1
Chr2_+_6761635 0.45 AT2G15490.2
AT2G15490.3
AT2G15490.1
UGT73B4
UDP-glycosyltransferase 73B4
Chr5_-_1267416 0.45 AT5G04470.1
SIM
cyclin-dependent protein kinase inhibitor
Chr5_+_21069110 0.45 AT5G51830.1
AT5G51830
pfkB-like carbohydrate kinase family protein
Chr3_+_3725989 0.45 AT3G11800.1
AT3G11800
Expp1 protein
Chr1_-_29034822 0.44 AT1G77280.2
AT1G77280.1
AT1G77280
kinase with adenine nucleotide alpha hydrolases-like domain-containing protein
Chr5_-_4206458 0.44 AT5G13190.2
AT5G13190.1
GILP
GSH-induced LITAF domain protein
Chr5_+_4441858 0.44 AT5G13760.1
AT5G13760
Plasma-membrane choline transporter family protein
Chr5_+_6266974 0.43 AT5G18800.2
AT5G18800.1
AT5G18800
Cox19-like CHCH family protein
Chr3_+_22494739 0.43 AT3G60880.2
AT3G60880.1
DHDPS1
dihydrodipicolinate synthase 1
Chr1_+_25230239 0.43 AT1G67340.1
AT1G67340
HCP-like superfamily protein with MYND-type zinc finger
Chr5_-_3823891 0.43 AT5G11860.4
SSP5
SCP1-like small phosphatase 5
Chr2_+_16765920 0.43 AT2G40130.2
AT2G40130
Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
Chr2_+_16765709 0.42 AT2G40130.1
AT2G40130
Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
Chr4_+_17540490 0.42 AT4G37260.1
MYB73
myb domain protein 73
Chr2_-_11066184 0.42 AT2G25940.1
ALPHA-VPE
alpha-vacuolar processing enzyme
Chr5_-_1371480 0.42 AT5G04740.2
AT5G04740.1
ACR12
ACT domain-containing protein
Chr2_-_6668046 0.41 AT2G15320.1
AT2G15320
Leucine-rich repeat (LRR) family protein
Chr2_-_7934353 0.41 AT2G18230.1
PPa2
pyrophosphorylase 2
Chr5_-_7443389 0.40 AT5G22450.2
AT5G22450.1
AT5G22450.3
AT5G22450
spectrin beta chain, brain
Chr5_+_22156304 0.40 AT5G54540.1
AT5G54540
Uncharacterized conserved protein (UCP012943)
Chr1_-_11414502 0.40 AT1G31814.1
FRL2
FRIGIDA like 2
Chr4_+_8862744 0.40 AT4G15520.1
AT4G15520
tRNA/rRNA methyltransferase (SpoU) family protein
Chr2_-_14537556 0.40 AT2G34490.1
CYP710A2
cytochrome P450, family 710, subfamily A, polypeptide 2
Chr1_+_8903405 0.39 AT1G25380.1
AT1G25380.2
NDT2
NAD+ transporter 2
Chr4_-_13241537 0.39 AT4G26130.1
AT4G26130
cotton fiber protein
Chr3_-_19662025 0.38 AT3G53020.1
STV1
Ribosomal protein L24e family protein
Chr2_-_17403050 0.38 AT2G41710.3
AT2G41710.2
AT2G41710.1
AT2G41710.4
AT2G41710
Integrase-type DNA-binding superfamily protein
Chr4_+_17858351 0.38 AT4G38000.1
DOF4.7
DNA binding with one finger 4.7
Chr1_-_24441073 0.38 AT1G65720.1
AT1G65720
transmembrane protein
Chr2_+_17572305 0.38 AT2G42150.1
AT2G42150
DNA-binding bromodomain-containing protein
Chr2_+_3667253 0.37 AT2G09800.1
AT2G09800

Chr1_+_2852363 0.36 AT1G08900.2
AT1G08900.4
AT1G08900.1
AT1G08900.5
AT1G08900.3
AT1G08900
Major facilitator superfamily protein
Chr4_-_11623797 0.36 AT4G21903.2
AT4G21903.1
AT4G21903
MATE efflux family protein
Chr1_-_756303 0.36 AT1G03140.1
AT1G03140
splicing factor Prp18 family protein
Chr5_-_3883111 0.35 AT5G12020.1
HSP17.6II
17.6 kDa class II heat shock protein
Chr2_-_13222642 0.35 AT2G31070.1
TCP10
TCP domain protein 10
Chr1_-_1647147 0.35 AT1G05560.1
UGT75B1
UDP-glucosyltransferase 75B1
Chr4_-_11761057 0.34 AT4G22220.1
ISU1
SufE/NifU family protein
Chr1_-_1647435 0.33 AT1G05560.2
UGT75B1
UDP-glucosyltransferase 75B1
Chr3_-_16230009 0.30 AT3G44680.1
HDA9
histone deacetylase 9

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G06839

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 3.2 GO:0044236 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
0.6 2.9 GO:0019323 pentose catabolic process(GO:0019323)
0.5 2.0 GO:1900409 positive regulation of cellular response to oxidative stress(GO:1900409)
0.5 2.5 GO:0010271 regulation of chlorophyll catabolic process(GO:0010271) regulation of tetrapyrrole catabolic process(GO:1901404)
0.4 1.3 GO:0016540 protein autoprocessing(GO:0016540)
0.4 1.6 GO:0048480 stigma development(GO:0048480)
0.3 2.0 GO:0019509 L-methionine biosynthetic process from methylthioadenosine(GO:0019509) amino acid salvage(GO:0043102) L-methionine salvage(GO:0071267)
0.3 1.0 GO:0071422 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.3 1.4 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.3 1.0 GO:0010185 regulation of cellular defense response(GO:0010185)
0.2 0.7 GO:0080040 positive regulation of cellular response to phosphate starvation(GO:0080040)
0.2 1.3 GO:0010731 protein glutathionylation(GO:0010731)
0.2 1.3 GO:0042447 cytokinin catabolic process(GO:0009823) hormone catabolic process(GO:0042447)
0.2 0.8 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.2 1.9 GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.2 0.5 GO:2000058 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.2 0.9 GO:0019336 phenol-containing compound catabolic process(GO:0019336)
0.2 0.5 GO:1902464 histone H3-K27 trimethylation(GO:0098532) regulation of histone H3-K27 trimethylation(GO:1902464)
0.2 3.6 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.1 0.6 GO:0033353 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.1 1.6 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.1 0.4 GO:0043132 NAD transport(GO:0043132)
0.1 1.3 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.1 2.3 GO:0006826 iron ion transport(GO:0006826)
0.1 0.7 GO:0060148 positive regulation of posttranscriptional gene silencing(GO:0060148)
0.1 0.7 GO:2000306 positive regulation of photomorphogenesis(GO:2000306)
0.1 0.7 GO:0046482 para-aminobenzoic acid metabolic process(GO:0046482)
0.1 2.5 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.1 0.5 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.1 3.4 GO:0016126 sterol biosynthetic process(GO:0016126)
0.1 0.3 GO:0019594 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.1 0.4 GO:0006624 vacuolar protein processing(GO:0006624)
0.1 0.6 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.1 1.0 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.1 5.0 GO:0042538 hyperosmotic salinity response(GO:0042538)
0.1 0.2 GO:0042353 fucose biosynthetic process(GO:0042353)
0.1 0.4 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.1 11.7 GO:0009751 response to salicylic acid(GO:0009751)
0.1 0.4 GO:1901001 positive regulation of auxin mediated signaling pathway(GO:0010929) negative regulation of response to salt stress(GO:1901001)
0.1 0.1 GO:0051099 positive regulation of binding(GO:0051099)
0.1 0.7 GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043162)
0.1 0.7 GO:0018202 peptidyl-diphthamide metabolic process(GO:0017182) peptidyl-diphthamide biosynthetic process from peptidyl-histidine(GO:0017183) peptidyl-histidine modification(GO:0018202)
0.1 1.0 GO:0007584 response to nutrient(GO:0007584)
0.1 0.9 GO:0015743 malate transport(GO:0015743)
0.1 0.9 GO:0031053 primary miRNA processing(GO:0031053)
0.1 0.4 GO:0000967 rRNA 5'-end processing(GO:0000967) ncRNA 5'-end processing(GO:0034471)
0.1 0.3 GO:1900055 regulation of leaf senescence(GO:1900055)
0.0 0.7 GO:0006002 fructose 6-phosphate metabolic process(GO:0006002)
0.0 1.5 GO:0010197 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.0 0.2 GO:0042149 cellular response to glucose starvation(GO:0042149)
0.0 0.6 GO:0043248 proteasome assembly(GO:0043248)
0.0 0.1 GO:0006097 glyoxylate cycle(GO:0006097)
0.0 0.4 GO:0009089 lysine biosynthetic process(GO:0009085) lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.0 0.1 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.0 2.4 GO:0019722 calcium-mediated signaling(GO:0019722)
0.0 0.3 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.0 0.6 GO:0010037 response to carbon dioxide(GO:0010037)
0.0 0.5 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.0 2.1 GO:0009867 jasmonic acid mediated signaling pathway(GO:0009867)
0.0 0.9 GO:0016117 tetraterpenoid biosynthetic process(GO:0016109) carotenoid biosynthetic process(GO:0016117)
0.0 0.5 GO:0030968 endoplasmic reticulum unfolded protein response(GO:0030968)
0.0 0.4 GO:0060688 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.0 0.1 GO:0015940 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.0 0.3 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.0 0.6 GO:0007030 Golgi organization(GO:0007030)
0.0 1.0 GO:0022611 seed dormancy process(GO:0010162) dormancy process(GO:0022611)
0.0 0.2 GO:0051985 mitotic spindle assembly checkpoint(GO:0007094) spindle checkpoint(GO:0031577) negative regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032435) protein exit from endoplasmic reticulum(GO:0032527) negative regulation of sister chromatid segregation(GO:0033046) negative regulation of mitotic sister chromatid segregation(GO:0033048) negative regulation of mitotic metaphase/anaphase transition(GO:0045841) negative regulation of chromosome segregation(GO:0051985) spindle assembly checkpoint(GO:0071173) mitotic spindle checkpoint(GO:0071174) negative regulation of proteasomal protein catabolic process(GO:1901799) negative regulation of metaphase/anaphase transition of cell cycle(GO:1902100) negative regulation of proteolysis involved in cellular protein catabolic process(GO:1903051) negative regulation of cellular protein catabolic process(GO:1903363) negative regulation of mitotic sister chromatid separation(GO:2000816)
0.0 0.2 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.8 GO:0009911 positive regulation of flower development(GO:0009911)
0.0 3.5 GO:0071456 cellular response to hypoxia(GO:0071456)
0.0 0.4 GO:0010227 floral organ abscission(GO:0010227)
0.0 0.4 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.0 1.6 GO:0010200 response to chitin(GO:0010200)
0.0 4.4 GO:0006979 response to oxidative stress(GO:0006979)
0.0 0.2 GO:0080156 mitochondrial mRNA modification(GO:0080156)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.4 GO:0001673 male germ cell nucleus(GO:0001673)
0.3 0.8 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.3 2.3 GO:0017119 Golgi transport complex(GO:0017119)
0.2 0.6 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.1 0.5 GO:0000835 ER ubiquitin ligase complex(GO:0000835) Hrd1p ubiquitin ligase complex(GO:0000836) Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839)
0.1 0.7 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.1 1.3 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.1 0.7 GO:0000813 ESCRT I complex(GO:0000813)
0.1 1.5 GO:0031012 extracellular matrix(GO:0031012)
0.0 0.1 GO:0009514 glyoxysome(GO:0009514)
0.0 0.1 GO:0031021 interphase microtubule organizing center(GO:0031021)
0.0 0.4 GO:0000326 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.0 0.6 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 0.5 GO:0005682 U5 snRNP(GO:0005682)
0.0 1.3 GO:0000775 chromosome, centromeric region(GO:0000775)
0.0 0.2 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.0 0.9 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
0.0 0.8 GO:0005764 lysosome(GO:0005764)
0.0 1.0 GO:0031201 SNARE complex(GO:0031201)
0.0 0.3 GO:0005686 U2 snRNP(GO:0005686)
0.0 0.8 GO:0005819 spindle(GO:0005819)
0.0 0.1 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.0 GO:0010297 heteropolysaccharide binding(GO:0010297)
0.5 2.0 GO:0019172 glyoxalase III activity(GO:0019172)
0.4 1.3 GO:0045174 oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor(GO:0016672) glutathione dehydrogenase (ascorbate) activity(GO:0045174)
0.4 1.3 GO:0008798 beta-aspartyl-peptidase activity(GO:0008798)
0.4 3.0 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.3 1.0 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.3 1.3 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.3 0.9 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.2 2.8 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.2 1.9 GO:0030291 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.2 0.6 GO:0016802 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.2 1.3 GO:0019139 cytokinin dehydrogenase activity(GO:0019139)
0.2 0.7 GO:0047215 indole-3-acetate beta-glucosyltransferase activity(GO:0047215) UDP-glucose:4-aminobenzoate acylglucosyltransferase activity(GO:0080002)
0.1 2.9 GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses(GO:0016861)
0.1 0.4 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.1 2.3 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.1 0.6 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.1 0.5 GO:1990381 ubiquitin-specific protease binding(GO:1990381)
0.1 0.9 GO:0015140 malate transmembrane transporter activity(GO:0015140)
0.1 0.7 GO:0051748 UTP-monosaccharide-1-phosphate uridylyltransferase activity(GO:0051748)
0.1 0.7 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.1 0.7 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.1 1.0 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.1 3.2 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.1 0.3 GO:0004534 5'-3' exoribonuclease activity(GO:0004534)
0.1 1.1 GO:0008420 CTD phosphatase activity(GO:0008420)
0.0 0.6 GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity(GO:0009815)
0.0 1.1 GO:0043424 protein histidine kinase binding(GO:0043424)
0.0 0.3 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.0 0.2 GO:0016649 electron-transferring-flavoprotein dehydrogenase activity(GO:0004174) oxidoreductase activity, acting on the CH-NH group of donors, quinone or similar compound as acceptor(GO:0016649)
0.0 0.5 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.0 0.2 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.0 0.2 GO:0034511 U3 snoRNA binding(GO:0034511)
0.0 0.3 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.0 0.5 GO:0008097 5S rRNA binding(GO:0008097)
0.0 0.3 GO:0032041 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.0 1.8 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 2.0 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.0 0.3 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.0 0.7 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.0 0.4 GO:0051184 cofactor transporter activity(GO:0051184)
0.0 0.4 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 0.6 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 0.9 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.3 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.0 1.0 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 0.8 GO:0080043 quercetin 3-O-glucosyltransferase activity(GO:0080043)
0.0 1.2 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 0.9 GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors(GO:0016706)
0.0 10.2 GO:0000976 regulatory region DNA binding(GO:0000975) transcription regulatory region sequence-specific DNA binding(GO:0000976) regulatory region nucleic acid binding(GO:0001067) transcription regulatory region DNA binding(GO:0044212)
0.0 0.9 GO:0008081 phosphoric diester hydrolase activity(GO:0008081)
0.0 0.7 GO:0009931 calmodulin-dependent protein kinase activity(GO:0004683) calcium-dependent protein serine/threonine kinase activity(GO:0009931) calcium-dependent protein kinase activity(GO:0010857)
0.0 0.1 GO:0016812 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides(GO:0016812)
0.0 0.8 GO:0043130 ubiquitin binding(GO:0043130)
0.0 0.1 GO:0016833 oxo-acid-lyase activity(GO:0016833)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.1 0.4 REACTOME TRNA AMINOACYLATION Genes involved in tRNA Aminoacylation
0.0 0.3 REACTOME PROTEIN FOLDING Genes involved in Protein folding