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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G03790

Z-value: 1.44

Transcription factors associated with AT5G03790

Gene Symbol Gene ID Gene Info
AT5G03790
AT5G03790 homeobox 51

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
HB51arTal_v1_Chr5_+_1004782_1004784-0.048.3e-01Click!

Activity profile of AT5G03790 motif

Sorted Z-values of AT5G03790 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_+_13391293 3.69 AT4G26530.2
AT4G26530.1
FBA5
Aldolase superfamily protein
Chr1_-_4090857 3.67 AT1G12090.1
ELP
extensin-like protein
Chr4_-_18098633 3.61 AT4G38770.1
PRP4
proline-rich protein 4
Chr4_+_13390754 3.48 AT4G26530.3
FBA5
Aldolase superfamily protein
Chr4_-_17777445 3.32 AT4G37800.1
XTH7
xyloglucan endotransglucosylase/hydrolase 7
Chr2_-_1800472 3.06 AT2G05070.1
LHCB2.2
photosystem II light harvesting complex protein 2.2
Chr5_+_26298728 3.03 AT5G65730.1
XTH6
xyloglucan endotransglucosylase/hydrolase 6
Chr5_+_8863224 3.02 AT5G25460.1
DGR2
transmembrane protein, putative (Protein of unknown function, DUF642)
Chr3_+_5505360 3.00 AT3G16240.1
DELTA-TIP
delta tonoplast integral protein
Chr5_+_5983683 2.98 AT5G18080.1
SAUR24
SAUR-like auxin-responsive protein family
Chr5_+_4757856 2.97 AT5G14740.3
AT5G14740.6
AT5G14740.1
AT5G14740.7
AT5G14740.8
AT5G14740.2
AT5G14740.4
AT5G14740.5
CA2
carbonic anhydrase 2
Chr3_-_16448844 2.85 AT3G44990.1
XTH31
xyloglucan endo-transglycosylase-related 8
Chr2_-_4312103 2.85 AT2G10940.2
AT2G10940.1
AT2G10940
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr2_-_11717432 2.83 AT2G27385.3
AT2G27385.2
AT2G27385.1
AT2G27385
Pollen Ole e 1 allergen and extensin family protein
Chr3_+_17228642 2.83 AT3G46780.1
PTAC16
plastid transcriptionally active 16
Chr5_+_17712203 2.81 AT5G44020.1
AT5G44020
HAD superfamily, subfamily IIIB acid phosphatase
Chr5_-_25343369 2.79 AT5G63180.1
AT5G63180
Pectin lyase-like superfamily protein
Chr5_+_22038165 2.77 AT5G54270.1
LHCB3
light-harvesting chlorophyll B-binding protein 3
Chr1_+_26141726 2.73 AT1G69530.2
AT1G69530.1
AT1G69530.3
AT1G69530.5
AT1G69530.4
EXPA1
expansin A1
Chr1_+_10375754 2.72 AT1G29670.1
AT1G29670
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_3008910 2.70 AT1G09310.1
AT1G09310
plant/protein (Protein of unknown function, DUF538)
Chr1_+_10375599 2.67 AT1G29670.2
AT1G29670
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_+_5556710 2.66 AT3G16370.1
AT3G16370
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_5508414 2.65 AT3G16250.1
PnsB3
NDH-dependent cyclic electron flow 1
Chr3_+_23266227 2.64 AT3G62950.1
AT3G62950
Thioredoxin superfamily protein
Chr5_+_5237970 2.63 AT5G16030.1
AT5G16030.4
AT5G16030.2
AT5G16030.3
AT5G16030
mental retardation GTPase activating protein
Chr5_+_4758921 2.58 AT5G14740.9
CA2
carbonic anhydrase 2
Chr5_-_8916856 2.51 AT5G25610.1
RD22
BURP domain-containing protein
Chr1_+_27338034 2.50 AT1G72600.2
AT1G72600.1
AT1G72600
hydroxyproline-rich glycoprotein family protein
Chr4_+_18291218 2.43 AT4G39330.1
AT4G39330.2
CAD9
cinnamyl alcohol dehydrogenase 9
Chr4_+_2449434 2.42 AT4G04840.1
MSRB6
methionine sulfoxide reductase B6
Chr5_+_17760865 2.42 AT5G44130.1
FLA13
FASCICLIN-like arabinogalactan protein 13 precursor
Chr1_+_26687202 2.41 AT1G70760.1
NdhL
inorganic carbon transport protein-like protein
Chr4_+_16022269 2.39 AT4G33220.1
AT4G33220.2
PME44
pectin methylesterase 44
Chr3_-_19139423 2.37 AT3G51600.1
LTP5
lipid transfer protein 5
Chr4_+_17243583 2.37 AT4G36540.2
AT4G36540.1
BEE2
BR enhanced expression 2
Chr2_+_13647699 2.36 AT2G32100.1
OFP16
ovate family protein 16
Chr1_-_6999839 2.36 AT1G20190.1
EXPA11
expansin 11
Chr5_-_8707885 2.32 AT5G25190.1
ESE3
Integrase-type DNA-binding superfamily protein
Chr3_+_18046144 2.32 AT3G48720.1
DCF
HXXXD-type acyl-transferase family protein
Chr1_-_26711462 2.31 AT1G70830.4
AT1G70830.2
AT1G70830.1
AT1G70830.5
AT1G70830.3
MLP28
MLP-like protein 28
Chr5_+_5238502 2.30 AT5G16030.5
AT5G16030
mental retardation GTPase activating protein
Chr2_+_16130290 2.29 AT2G38540.1
LP1
lipid transfer protein 1
Chr3_+_6180621 2.29 AT3G18050.1
AT3G18050
GPI-anchored protein
Chr1_-_4530222 2.28 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
Chr4_-_69884 2.28 AT4G00165.2
AT4G00165.1
AT4G00165
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_8183570 2.27 AT1G23080.2
AT1G23080.3
AT1G23080.4
AT1G23080.1
PIN7
Auxin efflux carrier family protein
Chr2_+_2763449 2.26 AT2G06850.1
AT2G06850.2
XTH4
xyloglucan endotransglucosylase/hydrolase 4
Chr3_-_4744263 2.25 AT3G14240.1
AT3G14240
Subtilase family protein
Chr3_+_17949416 2.24 AT3G48460.1
AT3G48460
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr2_+_2199151 2.22 AT2G05790.1
AT2G05790
O-Glycosyl hydrolases family 17 protein
Chr2_-_15474717 2.22 AT2G36870.2
AT2G36870.1
XTH32
xyloglucan endotransglucosylase/hydrolase 32
Chr1_+_19454798 2.22 AT1G52230.1
PSAH2
photosystem I subunit H2
Chr1_-_7043392 2.22 AT1G20340.1
DRT112
Cupredoxin superfamily protein
Chr2_+_19243348 2.22 AT2G46820.1
AT2G46820.2
PSI-P
photosystem I P subunit
Chr1_+_16127353 2.20 AT1G42970.1
GAPB
glyceraldehyde-3-phosphate dehydrogenase B subunit
Chr1_-_6999523 2.19 AT1G20190.2
EXPA11
expansin 11
Chr2_-_11727654 2.19 AT2G27420.1
AT2G27420
Cysteine proteinases superfamily protein
Chr5_-_14562863 2.19 AT5G36910.1
THI2.2
thionin 2.2
Chr5_+_21582614 2.16 AT5G53200.1
TRY
Homeodomain-like superfamily protein
Chr1_-_59215 2.13 AT1G01120.1
KCS1
3-ketoacyl-CoA synthase 1
Chr5_-_18026077 2.13 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
Chr2_-_6493512 2.12 AT2G15020.1
AT2G15020
hypothetical protein
Chr5_+_22530007 2.08 AT5G55620.1
AT5G55620
hypothetical protein
Chr5_-_17907638 2.08 AT5G44420.1
PDF1.2
plant defensin 1.2
Chr5_+_7502427 2.07 AT5G22580.1
AT5G22580
Stress responsive A/B Barrel Domain-containing protein
Chr1_+_10371675 2.07 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr4_-_7591259 2.04 AT4G12980.1
AT4G12980
Auxin-responsive family protein
Chr4_-_12772438 2.04 AT4G24780.1
AT4G24780.2
AT4G24780
Pectin lyase-like superfamily protein
Chr3_-_23165387 2.03 AT3G62630.1
AT3G62630
stress response NST1-like protein (DUF1645)
Chr1_+_24647121 2.03 AT1G66180.1
AT1G66180
Eukaryotic aspartyl protease family protein
Chr1_-_23137254 2.02 AT1G62510.1
AT1G62510
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_+_7222179 2.01 AT5G21430.1
AT5G21430.2
NdhU
Chaperone DnaJ-domain superfamily protein
Chr1_-_19052582 2.01 AT1G51400.1
AT1G51400
Photosystem II 5 kD protein
Chr1_-_28603932 2.00 AT1G76240.1
AT1G76240
DUF241 domain protein (DUF241)
Chr5_-_17581275 2.00 AT5G43750.1
PnsB5
NAD(P)H dehydrogenase 18
Chr5_-_18588792 1.99 AT5G45820.1
CIPK20
CBL-interacting protein kinase 20
Chr4_-_176870 1.98 AT4G00400.1
GPAT8
glycerol-3-phosphate acyltransferase 8
Chr5_+_24494291 1.98 AT5G60890.1
MYB34
myb domain protein 34
Chr2_-_17648945 1.98 AT2G42380.1
AT2G42380.4
AT2G42380.3
AT2G42380.2
AT2G42380.5
BZIP34
Basic-leucine zipper (bZIP) transcription factor family protein
Chr2_+_14384797 1.97 AT2G34060.1
AT2G34060
Peroxidase superfamily protein
Chr1_-_6940832 1.97 AT1G20010.1
TUB5
tubulin beta-5 chain
Chr1_+_19052193 1.96 AT1G51402.1
AT1G51402
hypothetical protein
Chr1_+_898480 1.95 AT1G03600.1
PSB27
photosystem II family protein
Chr5_-_7419335 1.95 AT5G22390.1
AT5G22390
FANTASTIC four-like protein (DUF3049)
Chr3_-_2130451 1.94 AT3G06750.1
AT3G06750
hydroxyproline-rich glycoprotein family protein
Chr3_-_21523375 1.94 AT3G58120.2
AT3G58120.1
BZIP61
Basic-leucine zipper (bZIP) transcription factor family protein
Chr4_-_11885533 1.93 AT4G22570.2
AT4G22570.1
APT3
adenine phosphoribosyl transferase 3
Chr3_-_4008018 1.93 AT3G12610.1
DRT100
Leucine-rich repeat (LRR) family protein
Chr3_-_17495033 1.92 AT3G47470.1
LHCA4
light-harvesting chlorophyll-protein complex I subunit A4
Chr4_-_15931332 1.92 AT4G33010.2
AT4G33010.1
GLDP1
glycine decarboxylase P-protein 1
Chr4_-_7493080 1.91 AT4G12730.1
FLA2
FASCICLIN-like arabinogalactan 2
Chr2_+_6518749 1.91 AT2G15050.3
AT2G15050.1
AT2G15050.2
LTP
lipid transfer protein
Chr3_-_8623214 1.89 AT3G23880.1
AT3G23880
F-box and associated interaction domains-containing protein
Chr5_+_7103384 1.86 AT5G20935.1
AT5G20935.2
CRR42
DUF3148 family protein
Chr1_-_4265156 1.85 AT1G12500.1
AT1G12500
Nucleotide-sugar transporter family protein
Chr1_-_26765285 1.85 AT1G70985.1
AT1G70985
hydroxyproline-rich glycoprotein family protein
Chr5_+_26573964 1.85 AT5G66590.1
AT5G66590
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr4_-_18428412 1.84 AT4G39710.2
AT4G39710.3
AT4G39710.1
PnsL4
FK506-binding protein 16-2
Chr5_+_2446669 1.83 AT5G07690.1
MYB29
myb domain protein 29
Chr4_+_12876822 1.83 AT4G25080.6
AT4G25080.5
AT4G25080.2
AT4G25080.1
AT4G25080.3
AT4G25080.4
CHLM
magnesium-protoporphyrin IX methyltransferase
Chr4_+_12220641 1.83 AT4G23400.1
PIP1%3B5
plasma membrane intrinsic protein 1;5
Chr2_-_15137012 1.82 AT2G36050.1
OFP15
ovate family protein 15
Chr1_+_1136078 1.82 AT1G04250.1
AXR3
AUX/IAA transcriptional regulator family protein
Chr1_-_20172364 1.82 AT1G54040.1
ESP
epithiospecifier protein
Chr1_-_983544 1.82 AT1G03870.1
FLA9
FASCICLIN-like arabinoogalactan 9
Chr1_-_20173933 1.81 AT1G54040.3
AT1G54040.2
ESP
epithiospecifier protein
Chr4_+_14192569 1.81 AT4G28720.1
YUC8
Flavin-binding monooxygenase family protein
Chr4_+_13177356 1.81 AT4G25960.1
ABCB2
P-glycoprotein 2
Chr1_+_5058583 1.80 AT1G14700.4
AT1G14700.1
AT1G14700.3
AT1G14700.2
PAP3
purple acid phosphatase 3
Chr2_+_19191247 1.80 AT2G46710.1
ROPGAP3
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein
Chr3_-_22322661 1.80 AT3G60390.1
HAT3
homeobox-leucine zipper protein 3
Chr5_+_22175461 1.80 AT5G54585.1
AT5G54585
hypothetical protein
Chr4_+_18130237 1.79 AT4G38860.1
AT4G38860
SAUR-like auxin-responsive protein family
Chr4_+_6327917 1.78 AT4G10150.1
AT4G10150
RING/U-box superfamily protein
Chr4_-_7545326 1.78 AT4G12880.2
ENODL19
early nodulin-like protein 19
Chr2_-_16908152 1.78 AT2G40475.1
ASG8
hypothetical protein
Chr2_+_12589866 1.77 AT2G29310.3
AT2G29310.1
AT2G29310.2
AT2G29310.4
AT2G29310
NAD(P)-binding Rossmann-fold superfamily protein
Chr3_+_8586359 1.77 AT3G23805.1
RALFL24
ralf-like 24
Chr2_-_12173951 1.76 AT2G28470.2
AT2G28470.4
AT2G28470.1
AT2G28470.3
BGAL8
beta-galactosidase 8
Chr1_+_3664187 1.76 AT1G10960.1
FD1
ferredoxin 1
Chr5_+_7168106 1.76 AT5G21100.1
AT5G21100
Plant L-ascorbate oxidase
Chr4_-_12768239 1.76 AT4G24770.1
RBP31
31-kDa RNA binding protein
Chr3_+_4510965 1.75 AT3G13750.1
BGAL1
beta galactosidase 1
Chr4_-_12769419 1.75 AT4G24770.2
RBP31
31-kDa RNA binding protein
Chr4_+_18126057 1.75 AT4G38850.1
SAUR15
SAUR-like auxin-responsive protein family
Chr5_-_16820195 1.74 AT5G42070.1
AT5G42070
hypothetical protein
Chr5_-_17005510 1.74 AT5G42530.1
AT5G42530
hypothetical protein
Chr4_-_5932475 1.73 AT4G09350.1
NdhT
Chaperone DnaJ-domain superfamily protein
Chr1_-_10303418 1.73 AT1G29430.1
AT1G29430
SAUR-like auxin-responsive protein family
Chr3_-_20806333 1.73 AT3G56060.1
AT3G56060
Glucose-methanol-choline (GMC) oxidoreductase family protein
Chr4_+_8360996 1.72 AT4G14560.1
IAA1
indole-3-acetic acid inducible
Chr4_-_17835017 1.72 AT4G37930.1
SHM1
serine transhydroxymethyltransferase 1
Chr4_+_9906821 1.72 AT4G17810.1
AT4G17810.2
AT4G17810
C2H2 and C2HC zinc fingers superfamily protein
Chr1_+_24035941 1.71 AT1G64680.1
AT1G64680.2
AT1G64680
beta-carotene isomerase D27
Chr1_-_26538437 1.71 AT1G70410.2
BCA4
beta carbonic anhydrase 4
Chr1_+_28428671 1.70 AT1G75710.1
AT1G75710
C2H2-like zinc finger protein
Chr1_-_19101265 1.70 AT1G51500.1
ABCG12
ABC-2 type transporter family protein
Chr4_-_7545512 1.70 AT4G12880.1
ENODL19
early nodulin-like protein 19
Chr4_-_16583075 1.68 AT4G34760.1
AT4G34760
SAUR-like auxin-responsive protein family
Chr2_-_12433796 1.68 AT2G28950.1
EXPA6
expansin A6
Chr4_-_14204061 1.68 AT4G28750.1
PSAE-1
Photosystem I reaction centre subunit IV / PsaE protein
Chr4_-_15059846 1.68 AT4G30950.1
FAD6
fatty acid desaturase 6
Chr5_+_17937622 1.67 AT5G44530.3
AT5G44530.2
AT5G44530.1
AT5G44530
Subtilase family protein
Chr5_-_20712386 1.67 AT5G50915.4
AT5G50915.2
AT5G50915.1
AT5G50915.3
AT5G50915
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr2_-_10043673 1.67 AT2G23600.1
AT2G23600.3
AT2G23600.2
ACL
acetone-cyanohydrin lyase
Chr3_-_6855513 1.67 AT3G19720.3
AT3G19720.2
AT3G19720.1
ARC5
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_-_20257916 1.66 AT3G54720.1
AMP1
Peptidase M28 family protein
Chr5_-_24990331 1.66 AT5G62220.1
GT18
glycosyltransferase 18
Chr1_+_26705420 1.65 AT1G70820.1
AT1G70820.2
AT1G70820
phosphoglucomutase, putative / glucose phosphomutase
Chr3_-_6882235 1.65 AT3G19820.3
AT3G19820.1
AT3G19820.2
DWF1
cell elongation protein / DWARF1 / DIMINUTO (DIM)
Chr2_+_14849357 1.65 AT2G35260.1
AT2G35260
CAAX protease self-immunity protein
Chr3_-_23319636 1.65 AT3G63110.1
IPT3
isopentenyltransferase 3
Chr3_+_18417568 1.65 AT3G49670.1
BAM2
Leucine-rich receptor-like protein kinase family protein
Chr1_-_1043887 1.64 AT1G04040.1
AT1G04040
HAD superfamily, subfamily IIIB acid phosphatase
Chr5_-_2182538 1.63 AT5G07020.1
AT5G07020
proline-rich family protein
Chr2_-_14523568 1.63 AT2G34420.1
LHB1B2
photosystem II light harvesting complex protein B1B2
Chr4_-_12822497 1.63 AT4G24930.1
AT4G24930
thylakoid lumenal 17.9 kDa protein, chloroplast
Chr4_+_5550404 1.62 AT4G08685.1
SAH7
Pollen Ole e 1 allergen and extensin family protein
Chr1_+_21136835 1.62 AT1G56430.1
NAS4
nicotianamine synthase 4
Chr2_-_1149261 1.62 AT2G03750.1
AT2G03750
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_+_3499537 1.62 AT3G11170.1
FAD7
fatty acid desaturase 7
Chr5_+_2680401 1.62 AT5G08330.1
TCP11
TCP family transcription factor
Chr4_+_14677661 1.61 AT4G30020.2
AT4G30020.3
AT4G30020
PA-domain containing subtilase family protein
Chr3_+_2563803 1.61 AT3G08030.1
AT3G08030
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
Chr3_+_7280792 1.60 AT3G20820.1
AT3G20820
Leucine-rich repeat (LRR) family protein
Chr2_+_9259511 1.60 AT2G21650.1
MEE3
Homeodomain-like superfamily protein
Chr4_-_8350030 1.60 AT4G14550.4
IAA14
indole-3-acetic acid inducible 14
Chr3_+_20016837 1.60 AT3G54050.1
AT3G54050.2
HCEF1
high cyclic electron flow 1
Chr2_-_12277417 1.60 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
Chr4_+_15819489 1.60 AT4G32800.1
AT4G32800
Integrase-type DNA-binding superfamily protein
Chr5_+_4087689 1.60 AT5G12940.1
AT5G12940
Leucine-rich repeat (LRR) family protein
Chr1_+_27670626 1.60 AT1G73600.1
AT1G73600
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr2_+_10667898 1.59 AT2G25080.1
GPX1
glutathione peroxidase 1
Chr1_-_227302 1.59 AT1G01620.2
PIP1C
plasma membrane intrinsic protein 1C
Chr1_+_27669152 1.59 AT1G73600.2
AT1G73600
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_-_227543 1.59 AT1G01620.1
PIP1C
plasma membrane intrinsic protein 1C
Chr5_-_23406479 1.59 AT5G57780.1
P1R1
transcription factor
Chr5_+_26572265 1.59 AT5G66580.1
AT5G66580
hypothetical protein
Chr5_-_17909507 1.59 AT5G44430.1
PDF1.2c
plant defensin 1.2C
Chr2_+_8059106 1.58 AT2G18560.1
AT2G18560
UDP-Glycosyltransferase superfamily protein
Chr1_-_26537422 1.58 AT1G70410.3
AT1G70410.1
BCA4
beta carbonic anhydrase 4
Chr1_+_6927736 1.58 AT1G19960.1
AT1G19960
transcription factor
Chr5_-_3728726 1.58 AT5G11590.1
TINY2
Integrase-type DNA-binding superfamily protein
Chr4_+_10651744 1.57 AT4G19530.1
AT4G19530.2
AT4G19530
disease resistance protein (TIR-NBS-LRR class) family
Chr3_+_10017321 1.57 AT3G27160.1
AT3G27160.2
GHS1
Ribosomal protein S21 family protein
Chr1_-_22308289 1.57 AT1G60550.1
ECHID
enoyl-CoA hydratase/isomerase D
Chr5_+_19825078 1.57 AT5G48900.1
AT5G48900
Pectin lyase-like superfamily protein
Chr5_+_15703078 1.57 AT5G39210.1
CRR7
chlororespiratory reduction 7
Chr2_+_7964326 1.55 AT2G18328.1
RL4
RAD-like 4
Chr4_-_8454144 1.55 AT4G14740.4
AT4G14740.2
AT4G14740.1
AT4G14740
auxin canalization protein (DUF828)
Chr2_-_12277245 1.55 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
Chr1_-_18413016 1.55 AT1G49750.1
AT1G49750
Leucine-rich repeat (LRR) family protein
Chr5_+_26261136 1.55 AT5G65683.1
WAVH2
Zinc finger (C3HC4-type RING finger) family protein
Chr3_+_2564153 1.55 AT3G08030.2
AT3G08030
DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642)
Chr4_-_11504739 1.55 AT4G21650.1
AT4G21650
Subtilase family protein
Chr2_+_11481326 1.55 AT2G26910.1
ABCG32
pleiotropic drug resistance 4
Chr1_-_25758232 1.54 AT1G68590.2
PSRP3/1
Ribosomal protein PSRP-3/Ycf65
Chr4_-_16384468 1.54 AT4G34220.1
AT4G34220
Leucine-rich repeat protein kinase family protein
Chr5_+_25969190 1.54 AT5G65010.2
ASN2
asparagine synthetase 2

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G03790

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.2 7.5 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
1.2 3.6 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
1.1 3.3 GO:0009234 menaquinone metabolic process(GO:0009233) menaquinone biosynthetic process(GO:0009234)
0.8 2.3 GO:0080051 cutin transport(GO:0080051)
0.7 2.2 GO:1900033 regulation of trichome patterning(GO:1900032) negative regulation of trichome patterning(GO:1900033)
0.7 2.2 GO:0010028 xanthophyll cycle(GO:0010028)
0.7 2.2 GO:0010541 acropetal auxin transport(GO:0010541)
0.7 4.3 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.7 6.2 GO:0043096 adenine salvage(GO:0006168) purine nucleobase salvage(GO:0043096)
0.7 2.0 GO:0042660 positive regulation of trichoblast fate specification(GO:0010063) positive regulation of cell fate specification(GO:0042660) positive regulation of plant epidermal cell differentiation(GO:1903890)
0.7 2.0 GO:0015840 urea transport(GO:0015840)
0.6 1.9 GO:0071461 cellular response to redox state(GO:0071461)
0.6 1.9 GO:0080145 cysteine homeostasis(GO:0080145)
0.6 2.4 GO:0030418 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.6 4.2 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.6 2.4 GO:0010480 microsporocyte differentiation(GO:0010480)
0.6 1.7 GO:0006436 tryptophanyl-tRNA aminoacylation(GO:0006436)
0.6 2.8 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.5 2.7 GO:0010360 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.5 1.6 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.5 4.3 GO:0043489 RNA stabilization(GO:0043489)
0.5 1.6 GO:0019279 L-methionine biosynthetic process from L-homoserine via cystathionine(GO:0019279) 'de novo' L-methionine biosynthetic process(GO:0071266)
0.5 2.2 GO:0000023 maltose metabolic process(GO:0000023)
0.5 8.5 GO:0015976 carbon utilization(GO:0015976)
0.5 3.6 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.5 1.5 GO:0071457 cellular response to ozone(GO:0071457)
0.5 3.1 GO:0070982 L-asparagine biosynthetic process(GO:0070981) L-asparagine metabolic process(GO:0070982)
0.5 1.5 GO:0010275 NAD(P)H dehydrogenase complex assembly(GO:0010275)
0.5 0.5 GO:0090355 positive regulation of auxin metabolic process(GO:0090355)
0.5 9.0 GO:0006949 syncytium formation(GO:0006949)
0.5 8.5 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.4 1.3 GO:0015717 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.4 4.4 GO:0032876 negative regulation of DNA endoreduplication(GO:0032876)
0.4 2.6 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.4 0.4 GO:0010451 floral meristem growth(GO:0010451)
0.4 2.6 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.4 1.3 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.4 1.7 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.4 1.3 GO:0051099 positive regulation of binding(GO:0051099)
0.4 2.5 GO:0006013 mannose metabolic process(GO:0006013)
0.4 0.8 GO:0043271 negative regulation of ion transport(GO:0043271)
0.4 2.0 GO:0010450 inflorescence meristem growth(GO:0010450)
0.4 2.8 GO:1904276 regulation of wax biosynthetic process(GO:1904276) positive regulation of wax biosynthetic process(GO:1904278)
0.4 2.4 GO:0031116 positive regulation of microtubule polymerization(GO:0031116)
0.4 1.2 GO:0090058 metaxylem development(GO:0090058)
0.4 1.5 GO:0080003 thalianol metabolic process(GO:0080003)
0.4 1.2 GO:0043953 protein transport by the Tat complex(GO:0043953)
0.4 2.3 GO:0009650 UV protection(GO:0009650)
0.4 0.4 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.4 3.8 GO:0030104 water homeostasis(GO:0030104)
0.4 2.3 GO:1902326 positive regulation of chlorophyll biosynthetic process(GO:1902326)
0.4 1.1 GO:0034486 hexose transport(GO:0008645) fructose transport(GO:0015755) vacuolar transmembrane transport(GO:0034486)
0.4 1.5 GO:0000719 photoreactive repair(GO:0000719)
0.4 1.1 GO:1901031 regulation of response to reactive oxygen species(GO:1901031)
0.4 1.5 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.4 11.0 GO:0010025 wax biosynthetic process(GO:0010025)
0.4 3.7 GO:1902222 L-phenylalanine catabolic process(GO:0006559) erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process(GO:1902222)
0.4 1.1 GO:0006768 biotin metabolic process(GO:0006768) biotin biosynthetic process(GO:0009102)
0.4 1.8 GO:0006788 heme oxidation(GO:0006788)
0.4 3.3 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.4 1.8 GO:0006106 fumarate metabolic process(GO:0006106)
0.4 2.2 GO:0010047 fruit dehiscence(GO:0010047)
0.4 1.1 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.4 1.1 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.3 6.3 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.3 4.8 GO:0010274 hydrotropism(GO:0010274)
0.3 0.7 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.3 1.3 GO:0090342 regulation of cell aging(GO:0090342)
0.3 4.0 GO:0032544 plastid translation(GO:0032544)
0.3 0.7 GO:0006426 glycyl-tRNA aminoacylation(GO:0006426)
0.3 8.5 GO:0009913 epidermis development(GO:0008544) epidermal cell differentiation(GO:0009913) epithelial cell differentiation(GO:0030855)
0.3 0.3 GO:0010166 wax metabolic process(GO:0010166)
0.3 1.3 GO:0098740 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.3 7.6 GO:0010207 photosystem II assembly(GO:0010207)
0.3 1.3 GO:0006419 alanyl-tRNA aminoacylation(GO:0006419)
0.3 1.2 GO:0015965 diadenosine polyphosphate metabolic process(GO:0015959) diadenosine tetraphosphate metabolic process(GO:0015965)
0.3 1.5 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.3 0.9 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.3 1.2 GO:0042450 arginine biosynthetic process via ornithine(GO:0042450)
0.3 0.9 GO:0010220 positive regulation of vernalization response(GO:0010220)
0.3 6.0 GO:0006833 water transport(GO:0006833) fluid transport(GO:0042044)
0.3 1.5 GO:0019742 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.3 6.4 GO:0009645 response to low light intensity stimulus(GO:0009645)
0.3 0.9 GO:0030811 regulation of glycolytic process(GO:0006110) regulation of nucleotide catabolic process(GO:0030811) regulation of carbohydrate catabolic process(GO:0043470) regulation of cellular carbohydrate catabolic process(GO:0043471)
0.3 1.4 GO:2001295 malonyl-CoA biosynthetic process(GO:2001295)
0.3 3.4 GO:0019253 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.3 0.8 GO:0006557 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.3 1.4 GO:0042724 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.3 2.2 GO:0016129 phytosteroid biosynthetic process(GO:0016129) brassinosteroid biosynthetic process(GO:0016132)
0.3 1.1 GO:0009831 plant-type cell wall modification involved in multidimensional cell growth(GO:0009831)
0.3 1.4 GO:0046713 borate transport(GO:0046713)
0.3 2.2 GO:0006526 arginine biosynthetic process(GO:0006526)
0.3 0.3 GO:2000036 regulation of stem cell population maintenance(GO:2000036) regulation of stem cell differentiation(GO:2000736)
0.3 1.1 GO:0001887 selenium compound metabolic process(GO:0001887)
0.3 4.6 GO:0009641 shade avoidance(GO:0009641)
0.3 0.8 GO:0080190 secondary growth(GO:0080117) lateral growth(GO:0080190)
0.3 0.8 GO:0072718 response to cisplatin(GO:0072718)
0.3 4.0 GO:0048564 photosystem I assembly(GO:0048564)
0.3 0.5 GO:0060429 epithelium development(GO:0060429)
0.3 1.1 GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway(GO:0010322)
0.3 0.3 GO:0009647 skotomorphogenesis(GO:0009647)
0.3 7.7 GO:0006284 base-excision repair(GO:0006284)
0.3 0.8 GO:2001293 fatty-acyl-CoA catabolic process(GO:0036115) malonyl-CoA metabolic process(GO:2001293) malonyl-CoA catabolic process(GO:2001294)
0.3 3.4 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.3 1.0 GO:0030643 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.3 3.3 GO:1901141 regulation of lignin biosynthetic process(GO:1901141)
0.2 3.5 GO:0010052 guard cell differentiation(GO:0010052)
0.2 0.5 GO:0031297 replication fork processing(GO:0031297)
0.2 0.2 GO:0010254 nectary development(GO:0010254)
0.2 1.2 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.2 1.5 GO:1904961 quiescent center organization(GO:1904961)
0.2 2.0 GO:0051214 RNA virus induced gene silencing(GO:0051214)
0.2 1.2 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.2 2.9 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.2 14.8 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.2 6.0 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.2 1.2 GO:0009806 lignan metabolic process(GO:0009806) lignan biosynthetic process(GO:0009807)
0.2 4.1 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.2 0.5 GO:0009616 virus induced gene silencing(GO:0009616) modulation by symbiont of RNA levels in host(GO:0052018) modulation of RNA levels in other organism involved in symbiotic interaction(GO:0052249) cellular response to virus(GO:0098586)
0.2 1.7 GO:0006751 glutathione catabolic process(GO:0006751)
0.2 1.9 GO:0010158 abaxial cell fate specification(GO:0010158)
0.2 1.9 GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning(GO:0060774)
0.2 1.9 GO:0010190 cytochrome b6f complex assembly(GO:0010190)
0.2 0.7 GO:0033194 response to hydroperoxide(GO:0033194)
0.2 0.9 GO:0006063 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.2 0.9 GO:0080094 response to trehalose-6-phosphate(GO:0080094)
0.2 0.2 GO:0051101 regulation of DNA binding(GO:0051101)
0.2 0.7 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.2 0.7 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.2 0.7 GO:0043479 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.2 0.9 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.2 2.5 GO:0007143 female meiotic division(GO:0007143)
0.2 0.6 GO:0001560 regulation of cell growth by extracellular stimulus(GO:0001560)
0.2 2.5 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.2 4.6 GO:0009767 photosynthetic electron transport chain(GO:0009767)
0.2 1.4 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.2 0.2 GO:0046655 folic acid metabolic process(GO:0046655)
0.2 1.6 GO:0010065 primary meristem tissue development(GO:0010065)
0.2 1.0 GO:0071260 cellular response to mechanical stimulus(GO:0071260)
0.2 1.6 GO:0031222 arabinan catabolic process(GO:0031222)
0.2 0.6 GO:0006148 inosine catabolic process(GO:0006148) inosine metabolic process(GO:0046102)
0.2 0.8 GO:0009660 amyloplast organization(GO:0009660)
0.2 2.4 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.2 0.6 GO:0036292 DNA rewinding(GO:0036292)
0.2 0.8 GO:0031507 heterochromatin assembly(GO:0031507)
0.2 1.0 GO:0019401 alditol biosynthetic process(GO:0019401)
0.2 3.0 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.2 2.4 GO:0018904 ether metabolic process(GO:0018904)
0.2 2.4 GO:0009704 de-etiolation(GO:0009704)
0.2 0.8 GO:0090603 sieve element differentiation(GO:0090603)
0.2 2.7 GO:0010109 regulation of photosynthesis(GO:0010109)
0.2 2.5 GO:0010143 cutin biosynthetic process(GO:0010143)
0.2 0.8 GO:1902315 cell cycle DNA replication initiation(GO:1902292) nuclear cell cycle DNA replication initiation(GO:1902315) mitotic DNA replication initiation(GO:1902975)
0.2 1.2 GO:0009942 longitudinal axis specification(GO:0009942)
0.2 0.6 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.2 1.5 GO:0006346 methylation-dependent chromatin silencing(GO:0006346)
0.2 0.6 GO:0045597 positive regulation of cell differentiation(GO:0045597)
0.2 0.6 GO:0017145 stem cell division(GO:0017145)
0.2 5.8 GO:0006730 one-carbon metabolic process(GO:0006730)
0.2 4.3 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.2 0.2 GO:0031397 negative regulation of protein ubiquitination(GO:0031397) negative regulation of ligase activity(GO:0051352) negative regulation of ubiquitin-protein transferase activity(GO:0051444) negative regulation of ubiquitin protein ligase activity(GO:1904667)
0.2 3.8 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.2 2.1 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.2 0.7 GO:0048462 carpel formation(GO:0048462)
0.2 0.9 GO:0019419 sulfate reduction(GO:0019419)
0.2 0.9 GO:0006690 icosanoid metabolic process(GO:0006690) fatty acid derivative metabolic process(GO:1901568)
0.2 2.4 GO:0048759 xylem vessel member cell differentiation(GO:0048759)
0.2 1.0 GO:0097502 mannosylation(GO:0097502)
0.2 0.7 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.2 2.2 GO:0042793 transcription from plastid promoter(GO:0042793)
0.2 1.2 GO:0033517 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.2 0.5 GO:0052746 inositol phosphorylation(GO:0052746)
0.2 13.5 GO:0045490 pectin catabolic process(GO:0045490)
0.2 1.3 GO:0033206 meiotic cytokinesis(GO:0033206)
0.2 1.1 GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.2 0.6 GO:0002943 tRNA dihydrouridine synthesis(GO:0002943)
0.2 0.5 GO:0010113 negative regulation of systemic acquired resistance(GO:0010113)
0.2 1.4 GO:1902290 positive regulation of defense response to oomycetes(GO:1902290)
0.2 9.1 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.2 0.3 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
0.2 0.5 GO:0048442 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.2 1.6 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.2 1.5 GO:0046292 formaldehyde metabolic process(GO:0046292)
0.2 10.7 GO:0007018 microtubule-based movement(GO:0007018)
0.2 0.2 GO:0010589 leaf proximal/distal pattern formation(GO:0010589)
0.2 0.8 GO:0006421 asparaginyl-tRNA aminoacylation(GO:0006421)
0.2 0.5 GO:0001173 DNA-templated transcriptional start site selection(GO:0001173)
0.1 0.7 GO:2000576 regulation of microtubule motor activity(GO:2000574) positive regulation of microtubule motor activity(GO:2000576) regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000580) positive regulation of ATP-dependent microtubule motor activity, plus-end-directed(GO:2000582)
0.1 1.5 GO:0048829 root cap development(GO:0048829)
0.1 0.3 GO:0045005 DNA-dependent DNA replication maintenance of fidelity(GO:0045005)
0.1 0.4 GO:0048872 tissue homeostasis(GO:0001894) homeostasis of number of meristem cells(GO:0007639) homeostasis of number of cells(GO:0048872) homeostasis of number of cells within a tissue(GO:0048873)
0.1 0.6 GO:0071366 cellular response to indolebutyric acid stimulus(GO:0071366)
0.1 0.7 GO:0007142 male meiosis II(GO:0007142)
0.1 1.4 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.1 0.4 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.1 4.0 GO:0099518 vesicle transport along actin filament(GO:0030050) vesicle cytoskeletal trafficking(GO:0099518)
0.1 0.1 GO:0048832 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.1 0.6 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.1 2.6 GO:0019852 L-ascorbic acid metabolic process(GO:0019852)
0.1 5.5 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.1 0.3 GO:0008295 spermidine biosynthetic process(GO:0008295)
0.1 2.2 GO:0065001 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.1 0.4 GO:0010433 bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.1 0.5 GO:0015675 nickel cation transport(GO:0015675)
0.1 0.1 GO:0051051 negative regulation of transport(GO:0051051)
0.1 0.5 GO:0015739 sialic acid transport(GO:0015739)
0.1 0.6 GO:0035627 ceramide transport(GO:0035627)
0.1 0.5 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.1 6.0 GO:0048825 cotyledon development(GO:0048825)
0.1 0.4 GO:0034982 mitochondrial protein processing(GO:0034982)
0.1 0.6 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.1 2.1 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.1 1.6 GO:0045493 xylan catabolic process(GO:0045493)
0.1 1.1 GO:0030497 fatty acid elongation(GO:0030497)
0.1 0.7 GO:0090057 root radial pattern formation(GO:0090057)
0.1 4.3 GO:0016144 S-glycoside biosynthetic process(GO:0016144) glycosinolate biosynthetic process(GO:0019758) glucosinolate biosynthetic process(GO:0019761)
0.1 2.8 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.1 0.7 GO:0022403 cell cycle phase(GO:0022403) biological phase(GO:0044848) mitotic cell cycle phase(GO:0098763)
0.1 0.6 GO:0071715 icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
0.1 1.7 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.1 0.6 GO:0043247 telomere maintenance in response to DNA damage(GO:0043247)
0.1 4.9 GO:0045489 pectin biosynthetic process(GO:0045489)
0.1 0.8 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.1 4.7 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.1 2.3 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.1 0.9 GO:0010410 hemicellulose metabolic process(GO:0010410)
0.1 0.2 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.1 0.7 GO:0006471 protein ADP-ribosylation(GO:0006471) protein poly-ADP-ribosylation(GO:0070212)
0.1 0.2 GO:1901672 positive regulation of systemic acquired resistance(GO:1901672)
0.1 0.1 GO:0051480 regulation of cytosolic calcium ion concentration(GO:0051480)
0.1 0.2 GO:0007032 endosome organization(GO:0007032)
0.1 1.7 GO:0070413 trehalose metabolism in response to stress(GO:0070413)
0.1 1.0 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.1 0.6 GO:0033619 membrane protein proteolysis(GO:0033619)
0.1 0.6 GO:0051754 meiotic sister chromatid cohesion, centromeric(GO:0051754)
0.1 0.5 GO:0015939 pantothenate metabolic process(GO:0015939) pantothenate biosynthetic process(GO:0015940)
0.1 2.3 GO:0042335 cuticle development(GO:0042335)
0.1 0.9 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.1 0.5 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.1 0.8 GO:0051294 establishment of mitotic spindle orientation(GO:0000132) establishment of mitotic spindle localization(GO:0040001) establishment of spindle localization(GO:0051293) establishment of spindle orientation(GO:0051294) spindle localization(GO:0051653)
0.1 0.1 GO:0045596 negative regulation of cell differentiation(GO:0045596)
0.1 0.5 GO:0071323 cellular response to chitin(GO:0071323)
0.1 0.4 GO:0036065 fucosylation(GO:0036065)
0.1 0.4 GO:0010375 stomatal complex patterning(GO:0010375)
0.1 0.3 GO:0030030 cell projection organization(GO:0030030) cell projection assembly(GO:0030031)
0.1 0.8 GO:0043266 regulation of potassium ion transport(GO:0043266)
0.1 0.4 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.1 0.7 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.1 0.7 GO:0019747 regulation of isoprenoid metabolic process(GO:0019747)
0.1 0.6 GO:0009263 deoxyribonucleotide biosynthetic process(GO:0009263)
0.1 1.0 GO:0010267 production of ta-siRNAs involved in RNA interference(GO:0010267)
0.1 0.5 GO:0009635 response to herbicide(GO:0009635)
0.1 0.5 GO:2000114 regulation of establishment of cell polarity(GO:2000114)
0.1 0.4 GO:0010321 regulation of vegetative phase change(GO:0010321)
0.1 1.3 GO:0001709 cell fate determination(GO:0001709)
0.1 1.4 GO:0042726 flavin-containing compound metabolic process(GO:0042726)
0.1 0.4 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.1 1.1 GO:0005987 sucrose catabolic process(GO:0005987)
0.1 2.5 GO:0010075 regulation of meristem growth(GO:0010075)
0.1 0.5 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.1 2.1 GO:0000272 polysaccharide catabolic process(GO:0000272)
0.1 0.6 GO:1990066 nonphotochemical quenching(GO:0010196) energy quenching(GO:1990066)
0.1 0.6 GO:0035266 meristem growth(GO:0035266)
0.1 0.6 GO:0009099 valine biosynthetic process(GO:0009099)
0.1 0.3 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.1 0.3 GO:0000492 box C/D snoRNP assembly(GO:0000492)
0.1 0.5 GO:0007188 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.1 0.7 GO:2000904 regulation of starch metabolic process(GO:2000904)
0.1 0.7 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.1 0.2 GO:0060771 phyllotactic patterning(GO:0060771)
0.1 0.4 GO:0051096 regulation of helicase activity(GO:0051095) positive regulation of helicase activity(GO:0051096)
0.1 0.3 GO:0048830 adventitious root development(GO:0048830)
0.1 0.4 GO:0080151 positive regulation of salicylic acid mediated signaling pathway(GO:0080151)
0.1 0.2 GO:2000692 negative regulation of seed maturation(GO:2000692)
0.1 1.3 GO:0009959 negative gravitropism(GO:0009959)
0.1 0.4 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.1 0.4 GO:0035434 copper ion transmembrane transport(GO:0035434)
0.1 0.2 GO:0042780 termination of RNA polymerase III transcription(GO:0006386) tRNA 3'-trailer cleavage(GO:0042779) tRNA 3'-end processing(GO:0042780)
0.1 1.1 GO:0006465 signal peptide processing(GO:0006465)
0.1 0.3 GO:0019388 galactose catabolic process(GO:0019388) galactose catabolic process via UDP-galactose(GO:0033499)
0.1 0.2 GO:0033567 DNA replication, Okazaki fragment processing(GO:0033567)
0.1 0.3 GO:0036473 cell death in response to oxidative stress(GO:0036473) programmed cell death in response to reactive oxygen species(GO:0097468)
0.1 0.8 GO:0000966 RNA 5'-end processing(GO:0000966)
0.1 0.5 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.1 0.7 GO:0046466 membrane lipid catabolic process(GO:0046466)
0.1 0.3 GO:0046416 D-amino acid metabolic process(GO:0046416)
0.1 0.7 GO:0018344 protein geranylgeranylation(GO:0018344)
0.1 1.5 GO:0010091 trichome branching(GO:0010091)
0.1 0.4 GO:0010222 stem vascular tissue pattern formation(GO:0010222)
0.1 0.4 GO:0034035 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.1 0.7 GO:0010199 formation of organ boundary(GO:0010160) organ boundary specification between lateral organs and the meristem(GO:0010199) formation of anatomical boundary(GO:0048859)
0.1 0.3 GO:0006741 NADP biosynthetic process(GO:0006741)
0.1 0.1 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.1 0.6 GO:0009554 megasporogenesis(GO:0009554)
0.1 0.5 GO:0006109 regulation of carbohydrate metabolic process(GO:0006109)
0.1 0.6 GO:0006349 regulation of gene expression by genetic imprinting(GO:0006349) genetic imprinting(GO:0071514)
0.1 0.3 GO:0009113 purine nucleobase biosynthetic process(GO:0009113)
0.1 0.8 GO:0000919 cell plate assembly(GO:0000919)
0.1 0.5 GO:0097577 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.1 3.0 GO:0007131 reciprocal meiotic recombination(GO:0007131) reciprocal DNA recombination(GO:0035825)
0.1 0.9 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.1 0.8 GO:0005977 glycogen metabolic process(GO:0005977) energy reserve metabolic process(GO:0006112)
0.1 0.2 GO:0007266 Rho protein signal transduction(GO:0007266)
0.1 0.3 GO:0030834 regulation of actin filament depolymerization(GO:0030834)
0.1 0.5 GO:0010044 response to aluminum ion(GO:0010044)
0.1 0.4 GO:0048598 embryonic morphogenesis(GO:0048598)
0.1 0.9 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.1 0.2 GO:0006432 phenylalanyl-tRNA aminoacylation(GO:0006432)
0.1 0.2 GO:1902586 transport of virus in host, cell to cell(GO:0046740) multi-organism intercellular transport(GO:1902586)
0.1 0.3 GO:1905177 tracheary element differentiation(GO:1905177)
0.1 0.5 GO:0046739 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.1 1.0 GO:2000034 regulation of seed maturation(GO:2000034)
0.1 0.2 GO:0010253 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.1 0.2 GO:0015904 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891)
0.1 0.2 GO:0080144 amino acid homeostasis(GO:0080144)
0.1 1.4 GO:0080155 regulation of fertilization(GO:0080154) regulation of double fertilization forming a zygote and endosperm(GO:0080155)
0.1 4.5 GO:0009698 phenylpropanoid metabolic process(GO:0009698)
0.1 0.3 GO:0070979 protein K11-linked ubiquitination(GO:0070979)
0.1 1.2 GO:0010582 floral meristem determinacy(GO:0010582)
0.1 2.6 GO:0015979 photosynthesis(GO:0015979)
0.1 0.5 GO:0036297 interstrand cross-link repair(GO:0036297)
0.1 0.4 GO:0051955 amine transport(GO:0015837) regulation of organic acid transport(GO:0032890) regulation of amine transport(GO:0051952) regulation of amino acid transport(GO:0051955) regulation of amino acid export(GO:0080143)
0.1 0.3 GO:0042391 regulation of membrane potential(GO:0042391)
0.1 0.5 GO:0009396 folic acid-containing compound biosynthetic process(GO:0009396) tetrahydrofolate biosynthetic process(GO:0046654)
0.1 0.4 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.1 1.0 GO:1901068 guanosine-containing compound metabolic process(GO:1901068)
0.0 0.1 GO:0042138 meiotic DNA double-strand break formation(GO:0042138)
0.0 0.1 GO:0071490 far-red light signaling pathway(GO:0010018) cellular response to far red light(GO:0071490)
0.0 0.5 GO:0006094 gluconeogenesis(GO:0006094)
0.0 0.5 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.0 0.3 GO:0010031 circumnutation(GO:0010031) multicellular organismal movement(GO:0050879)
0.0 0.7 GO:0006722 triterpenoid metabolic process(GO:0006722)
0.0 0.5 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.0 0.1 GO:0048479 style development(GO:0048479)
0.0 0.3 GO:0033384 geranyl diphosphate metabolic process(GO:0033383) geranyl diphosphate biosynthetic process(GO:0033384)
0.0 0.5 GO:0071051 polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.0 0.6 GO:0006547 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 0.9 GO:0009581 detection of external stimulus(GO:0009581) detection of abiotic stimulus(GO:0009582)
0.0 0.1 GO:0043928 exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay(GO:0043928)
0.0 0.2 GO:0018206 peptidyl-methionine modification(GO:0018206)
0.0 0.2 GO:0016233 telomere capping(GO:0016233)
0.0 3.8 GO:0080167 response to karrikin(GO:0080167)
0.0 0.3 GO:0009187 cyclic nucleotide metabolic process(GO:0009187)
0.0 0.1 GO:0070141 response to UV-A(GO:0070141) cellular response to UV-A(GO:0071492)
0.0 0.2 GO:0009972 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.0 1.3 GO:0009179 glycolytic process(GO:0006096) ATP generation from ADP(GO:0006757) purine nucleoside diphosphate metabolic process(GO:0009135) purine ribonucleoside diphosphate metabolic process(GO:0009179) ADP metabolic process(GO:0046031)
0.0 0.4 GO:0000387 spliceosomal snRNP assembly(GO:0000387)
0.0 0.2 GO:0016560 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.0 0.6 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)
0.0 0.1 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.0 0.2 GO:0051571 positive regulation of histone H3-K4 methylation(GO:0051571)
0.0 0.5 GO:0009299 mRNA transcription(GO:0009299)
0.0 0.2 GO:0006821 chloride transport(GO:0006821)
0.0 0.2 GO:0016255 attachment of GPI anchor to protein(GO:0016255)
0.0 0.1 GO:0009747 hexokinase-dependent signaling(GO:0009747)
0.0 0.1 GO:0000012 single strand break repair(GO:0000012)
0.0 0.6 GO:0008360 regulation of cell shape(GO:0008360)
0.0 0.2 GO:0010098 suspensor development(GO:0010098)
0.0 0.8 GO:0009960 endosperm development(GO:0009960)
0.0 0.4 GO:0009082 branched-chain amino acid biosynthetic process(GO:0009082)
0.0 0.5 GO:2000032 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.0 0.5 GO:0055069 zinc ion homeostasis(GO:0055069)
0.0 0.3 GO:0009085 lysine biosynthetic process(GO:0009085) lysine biosynthetic process via diaminopimelate(GO:0009089) diaminopimelate metabolic process(GO:0046451)
0.0 0.2 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.0 0.5 GO:0010152 pollen maturation(GO:0010152)
0.0 0.2 GO:0035335 peptidyl-tyrosine dephosphorylation(GO:0035335)
0.0 0.7 GO:0010090 trichome morphogenesis(GO:0010090)
0.0 0.4 GO:1901071 glucosamine-containing compound metabolic process(GO:1901071)
0.0 0.2 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.0 0.3 GO:0010492 maintenance of shoot apical meristem identity(GO:0010492)
0.0 0.3 GO:1901642 nucleoside transmembrane transport(GO:1901642)
0.0 0.2 GO:0043486 histone exchange(GO:0043486)
0.0 0.2 GO:0080028 nitrile metabolic process(GO:0050898) nitrile biosynthetic process(GO:0080028)
0.0 0.0 GO:1902299 pre-replicative complex assembly involved in nuclear cell cycle DNA replication(GO:0006267) pre-replicative complex assembly(GO:0036388) pre-replicative complex assembly involved in cell cycle DNA replication(GO:1902299)
0.0 0.2 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.0 GO:1904589 regulation of protein import(GO:1904589)
0.0 0.5 GO:0010584 pollen exine formation(GO:0010584)
0.0 0.7 GO:0000027 ribosomal large subunit assembly(GO:0000027)
0.0 0.7 GO:1902410 cytokinesis by cell plate formation(GO:0000911) cytokinetic process(GO:0032506) mitotic cytokinetic process(GO:1902410)
0.0 0.3 GO:0046417 chorismate metabolic process(GO:0046417)
0.0 0.6 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.4 GO:0010027 thylakoid membrane organization(GO:0010027)
0.0 0.1 GO:0006022 aminoglycan metabolic process(GO:0006022)
0.0 0.3 GO:0080022 primary root development(GO:0080022)
0.0 0.1 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.0 0.1 GO:0000727 double-strand break repair via break-induced replication(GO:0000727)
0.0 0.2 GO:0070534 protein K63-linked ubiquitination(GO:0070534)
0.0 0.1 GO:0070525 tRNA threonylcarbamoyladenosine metabolic process(GO:0070525)
0.0 0.1 GO:1904666 regulation of ubiquitin protein ligase activity(GO:1904666) positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.0 0.0 GO:0048451 petal formation(GO:0048451)
0.0 0.1 GO:0051103 DNA ligation involved in DNA repair(GO:0051103)
0.0 0.2 GO:0006298 mismatch repair(GO:0006298)
0.0 1.3 GO:0009741 response to brassinosteroid(GO:0009741)
0.0 0.2 GO:0006879 cellular iron ion homeostasis(GO:0006879)
0.0 0.1 GO:0080186 developmental vegetative growth(GO:0080186)
0.0 0.2 GO:0009638 phototropism(GO:0009638)
0.0 0.2 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.0 0.1 GO:0051365 cellular response to potassium ion starvation(GO:0051365)
0.0 0.1 GO:0072659 protein localization to plasma membrane(GO:0072659)
0.0 0.2 GO:0006538 glutamate catabolic process(GO:0006538)
0.0 0.2 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 0.1 GO:0030307 positive regulation of cell growth(GO:0030307)
0.0 0.1 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.0 0.3 GO:0019915 lipid storage(GO:0019915)
0.0 0.4 GO:0048574 long-day photoperiodism, flowering(GO:0048574)
0.0 0.3 GO:0006891 intra-Golgi vesicle-mediated transport(GO:0006891)
0.0 0.2 GO:0009838 abscission(GO:0009838)
0.0 0.0 GO:0010198 synergid death(GO:0010198)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 1.0 GO:0016328 lateral plasma membrane(GO:0016328)
0.9 2.7 GO:0043667 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
0.7 2.2 GO:0030093 chloroplast photosystem I(GO:0030093)
0.7 10.6 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.6 5.8 GO:0030076 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.6 2.8 GO:0009897 external side of plasma membrane(GO:0009897)
0.5 3.9 GO:0009538 photosystem I reaction center(GO:0009538)
0.5 4.3 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.4 1.3 GO:0009523 photosystem II(GO:0009523)
0.4 1.7 GO:0016461 unconventional myosin complex(GO:0016461)
0.4 18.5 GO:0031978 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.4 1.2 GO:0033281 TAT protein transport complex(GO:0033281)
0.4 1.9 GO:0005960 glycine cleavage complex(GO:0005960)
0.3 5.3 GO:0009531 secondary cell wall(GO:0009531)
0.3 1.4 GO:0034426 etioplast envelope(GO:0034425) etioplast membrane(GO:0034426)
0.2 10.2 GO:0010319 stromule(GO:0010319)
0.2 3.1 GO:0045298 tubulin complex(GO:0045298)
0.2 3.2 GO:0009986 cell surface(GO:0009986)
0.2 0.7 GO:0031021 interphase microtubule organizing center(GO:0031021)
0.2 0.7 GO:0010007 magnesium chelatase complex(GO:0010007)
0.2 0.6 GO:0010330 cellulose synthase complex(GO:0010330)
0.2 2.1 GO:0010168 ER body(GO:0010168)
0.2 48.8 GO:0009535 chloroplast thylakoid membrane(GO:0009535)
0.2 37.2 GO:0009505 plant-type cell wall(GO:0009505)
0.2 1.2 GO:0009360 DNA polymerase III complex(GO:0009360)
0.2 4.0 GO:0042651 thylakoid membrane(GO:0042651)
0.2 1.0 GO:0005719 nuclear euchromatin(GO:0005719)
0.2 2.7 GO:0010005 cortical microtubule, transverse to long axis(GO:0010005)
0.2 1.6 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.2 0.8 GO:0090397 stigma papilla(GO:0090397)
0.2 0.5 GO:0060293 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.2 1.1 GO:0005787 signal peptidase complex(GO:0005787)
0.2 0.8 GO:0000812 Swr1 complex(GO:0000812)
0.2 0.3 GO:0045178 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.1 0.7 GO:0030286 dynein complex(GO:0030286)
0.1 0.4 GO:0070382 exocytic vesicle(GO:0070382)
0.1 0.7 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.1 6.0 GO:0009706 chloroplast inner membrane(GO:0009706)
0.1 1.4 GO:0016272 prefoldin complex(GO:0016272)
0.1 3.3 GO:0005871 kinesin complex(GO:0005871)
0.1 3.7 GO:0005875 microtubule associated complex(GO:0005875)
0.1 0.4 GO:0031390 Ctf18 RFC-like complex(GO:0031390)
0.1 1.2 GO:0000427 plastid-encoded plastid RNA polymerase complex(GO:0000427)
0.1 0.8 GO:0071818 BAT3 complex(GO:0071818)
0.1 0.4 GO:0043240 Fanconi anaemia nuclear complex(GO:0043240)
0.1 7.5 GO:0009534 chloroplast thylakoid(GO:0009534)
0.1 0.8 GO:0000778 condensed nuclear chromosome kinetochore(GO:0000778)
0.1 1.2 GO:0031209 SCAR complex(GO:0031209)
0.1 2.1 GO:0009574 preprophase band(GO:0009574)
0.1 3.2 GO:0042644 chloroplast nucleoid(GO:0042644)
0.1 6.2 GO:0005874 microtubule(GO:0005874)
0.1 1.1 GO:0070971 endoplasmic reticulum exit site(GO:0070971)
0.1 1.3 GO:0016459 myosin complex(GO:0016459)
0.1 1.2 GO:0055028 cortical microtubule(GO:0055028)
0.1 14.7 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.1 0.4 GO:0042645 mitochondrial nucleoid(GO:0042645)
0.1 0.7 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.1 0.5 GO:0009346 citrate lyase complex(GO:0009346)
0.1 0.3 GO:0008622 epsilon DNA polymerase complex(GO:0008622)
0.1 0.3 GO:0030863 cortical cytoskeleton(GO:0030863)
0.1 0.5 GO:0030139 endocytic vesicle(GO:0030139)
0.1 0.2 GO:0005658 alpha DNA polymerase:primase complex(GO:0005658)
0.1 0.5 GO:0051286 growing cell tip(GO:0035838) cell tip(GO:0051286) pollen tube tip(GO:0090404)
0.1 1.7 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.1 0.6 GO:0098576 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.1 13.1 GO:0048046 apoplast(GO:0048046)
0.1 0.2 GO:0009317 acetyl-CoA carboxylase complex(GO:0009317)
0.1 22.2 GO:0009570 chloroplast stroma(GO:0009570)
0.0 0.1 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.0 1.0 GO:0016324 apical plasma membrane(GO:0016324)
0.0 0.1 GO:0030896 checkpoint clamp complex(GO:0030896)
0.0 0.4 GO:0005801 cis-Golgi network(GO:0005801)
0.0 0.1 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.0 98.1 GO:0005576 extracellular region(GO:0005576)
0.0 0.3 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.0 0.1 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.0 0.1 GO:0097361 CIA complex(GO:0097361)
0.0 0.3 GO:0044665 MLL1/2 complex(GO:0044665) MLL1 complex(GO:0071339)
0.0 0.2 GO:0031907 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.0 0.1 GO:0030870 Mre11 complex(GO:0030870)
0.0 0.1 GO:0033597 mitotic checkpoint complex(GO:0033597)
0.0 0.4 GO:0042555 MCM complex(GO:0042555)
0.0 0.7 GO:0043596 nuclear replication fork(GO:0043596)
0.0 0.2 GO:0042765 GPI-anchor transamidase complex(GO:0042765)
0.0 0.5 GO:1902554 serine/threonine protein kinase complex(GO:1902554)
0.0 0.5 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.0 0.3 GO:0031011 Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.0 0.1 GO:0032807 DNA ligase IV complex(GO:0032807)
0.0 0.2 GO:0005657 replication fork(GO:0005657)
0.0 0.2 GO:0005854 nascent polypeptide-associated complex(GO:0005854)
0.0 6.0 GO:0044434 chloroplast part(GO:0044434)
0.0 0.3 GO:0000127 transcription factor TFIIIC complex(GO:0000127)
0.0 0.2 GO:0010369 chromocenter(GO:0010369)
0.0 0.0 GO:0070505 pollen coat(GO:0070505)
0.0 0.5 GO:0000419 DNA-directed RNA polymerase V complex(GO:0000419)
0.0 0.1 GO:0000408 EKC/KEOPS complex(GO:0000408)
0.0 0.1 GO:0000808 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.0 0.1 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.0 0.1 GO:0055037 recycling endosome(GO:0055037)
0.0 0.0 GO:0009513 etioplast(GO:0009513)
0.0 0.1 GO:0005763 organellar small ribosomal subunit(GO:0000314) mitochondrial small ribosomal subunit(GO:0005763)
0.0 0.2 GO:0032300 mismatch repair complex(GO:0032300)
0.0 0.3 GO:0005680 anaphase-promoting complex(GO:0005680)
0.0 0.1 GO:0000152 nuclear ubiquitin ligase complex(GO:0000152)
0.0 0.1 GO:0008250 oligosaccharyltransferase complex(GO:0008250)
0.0 0.0 GO:0010316 pyrophosphate-dependent phosphofructokinase complex(GO:0010316)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 3.1 GO:0004071 aspartate-ammonia ligase activity(GO:0004071)
0.8 2.5 GO:0071771 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.8 3.3 GO:0047158 sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity(GO:0047158)
0.8 6.2 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.8 2.3 GO:0080104 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.7 2.2 GO:0047100 glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity(GO:0047100)
0.7 2.2 GO:0046422 violaxanthin de-epoxidase activity(GO:0046422)
0.7 2.1 GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity(GO:0050567)
0.7 2.0 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.7 2.6 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.6 1.9 GO:0044540 L-cystine L-cysteine-lyase (deaminating)(GO:0044540)
0.6 1.9 GO:0004375 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.6 2.4 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.6 2.4 GO:0019156 isoamylase activity(GO:0019156)
0.6 2.4 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.6 2.3 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.6 1.7 GO:0004830 tryptophan-tRNA ligase activity(GO:0004830)
0.6 3.4 GO:0050017 L-3-cyanoalanine synthase activity(GO:0050017)
0.6 1.7 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.5 1.6 GO:0047804 cysteine-S-conjugate beta-lyase activity(GO:0047804)
0.5 4.3 GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity(GO:0033946)
0.5 2.6 GO:0016463 cadmium-transporting ATPase activity(GO:0015434) zinc-exporting ATPase activity(GO:0016463)
0.5 1.0 GO:0019187 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.5 1.6 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.5 1.5 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.5 11.8 GO:0102337 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.5 1.5 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.5 4.1 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.5 1.5 GO:0004528 phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311)
0.5 6.9 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.5 1.4 GO:0004133 glycogen debranching enzyme activity(GO:0004133) 4-alpha-glucanotransferase activity(GO:0004134)
0.5 0.5 GO:0016753 sinapoyltransferase activity(GO:0016752) O-sinapoyltransferase activity(GO:0016753)
0.4 11.0 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.4 1.3 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.4 13.4 GO:0004089 carbonate dehydratase activity(GO:0004089)
0.4 2.9 GO:0005034 osmosensor activity(GO:0005034)
0.4 10.3 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.4 7.7 GO:0005372 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.4 1.6 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.4 4.7 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.4 1.6 GO:0008395 steroid hydroxylase activity(GO:0008395)
0.4 1.1 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.4 3.0 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.4 1.5 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.4 1.5 GO:0042299 lupeol synthase activity(GO:0042299)
0.4 1.8 GO:0004333 fumarate hydratase activity(GO:0004333)
0.4 4.0 GO:0003905 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.4 1.1 GO:0016802 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.4 4.3 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.4 1.4 GO:0004075 biotin carboxylase activity(GO:0004075)
0.3 1.7 GO:0036374 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.3 8.2 GO:0004565 beta-galactosidase activity(GO:0004565)
0.3 6.9 GO:0080161 auxin transmembrane transporter activity(GO:0080161)
0.3 1.3 GO:0004813 alanine-tRNA ligase activity(GO:0004813)
0.3 1.6 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.3 1.9 GO:0003913 DNA photolyase activity(GO:0003913)
0.3 0.9 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.3 2.5 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.3 1.2 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.3 3.6 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.3 3.3 GO:0016161 beta-amylase activity(GO:0016161)
0.3 5.9 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.3 3.8 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.3 0.3 GO:0032135 DNA insertion or deletion binding(GO:0032135)
0.3 2.3 GO:0004392 heme oxygenase (decyclizing) activity(GO:0004392)
0.3 1.1 GO:0070818 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.3 0.8 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.3 1.1 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.3 1.4 GO:0080139 borate transmembrane transporter activity(GO:0046715) borate efflux transmembrane transporter activity(GO:0080139)
0.3 6.8 GO:0016168 chlorophyll binding(GO:0016168)
0.3 1.8 GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906)
0.3 1.3 GO:0019104 DNA N-glycosylase activity(GO:0019104)
0.2 2.7 GO:0004784 superoxide dismutase activity(GO:0004784) oxidoreductase activity, acting on superoxide radicals as acceptor(GO:0016721)
0.2 1.5 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.2 1.5 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.2 1.7 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.2 0.9 GO:0052739 phosphatidylserine 1-acylhydrolase activity(GO:0052739) 1-acyl-2-lysophosphatidylserine acylhydrolase activity(GO:0052740)
0.2 0.7 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.2 0.9 GO:0004820 glycine-tRNA ligase activity(GO:0004820)
0.2 2.1 GO:0035673 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.2 1.6 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.2 1.2 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.2 1.4 GO:0022829 porin activity(GO:0015288) wide pore channel activity(GO:0022829)
0.2 1.1 GO:0035197 siRNA binding(GO:0035197)
0.2 1.1 GO:0004781 sulfate adenylyltransferase (ATP) activity(GO:0004781)
0.2 0.7 GO:1990404 protein ADP-ribosylase activity(GO:1990404)
0.2 2.9 GO:0046556 alpha-L-arabinofuranosidase activity(GO:0046556)
0.2 2.0 GO:0004096 catalase activity(GO:0004096)
0.2 0.7 GO:0010283 pinoresinol reductase activity(GO:0010283)
0.2 0.9 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.2 0.9 GO:0005353 fructose transmembrane transporter activity(GO:0005353)
0.2 1.7 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.2 0.6 GO:0004609 phosphatidylserine decarboxylase activity(GO:0004609)
0.2 2.3 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.2 1.2 GO:0019144 ADP-sugar diphosphatase activity(GO:0019144) ADP-ribose pyrophosphohydrolase activity(GO:0080041)
0.2 0.8 GO:0070283 radical SAM enzyme activity(GO:0070283)
0.2 1.2 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.2 1.4 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.2 0.6 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.2 0.6 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.2 1.0 GO:0034432 bis(5'-adenosyl)-pentaphosphatase activity(GO:0034432)
0.2 1.0 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.2 0.9 GO:0016768 spermine synthase activity(GO:0016768)
0.2 0.9 GO:0005544 calcium-dependent phospholipid binding(GO:0005544)
0.2 0.6 GO:0061731 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.2 0.6 GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase(GO:0008839)
0.2 1.6 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.2 1.1 GO:0030594 ionotropic glutamate receptor activity(GO:0004970) extracellular ligand-gated ion channel activity(GO:0005230) transmitter-gated ion channel activity(GO:0022824) transmitter-gated channel activity(GO:0022835) neurotransmitter receptor activity(GO:0030594)
0.2 0.9 GO:0004001 adenosine kinase activity(GO:0004001)
0.2 0.9 GO:0008964 phosphoenolpyruvate carboxylase activity(GO:0008964)
0.2 5.2 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.2 1.1 GO:0047631 ADP-ribose diphosphatase activity(GO:0047631)
0.2 0.7 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.2 1.0 GO:0051723 protein methylesterase activity(GO:0051723)
0.2 0.7 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.2 0.9 GO:0010313 phytochrome binding(GO:0010313)
0.2 0.5 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.2 0.5 GO:0004150 dihydroneopterin aldolase activity(GO:0004150)
0.2 0.7 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.2 1.6 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.2 1.5 GO:0016464 chloroplast protein-transporting ATPase activity(GO:0016464)
0.2 1.1 GO:0051018 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.2 0.6 GO:0004400 histidinol-phosphate transaminase activity(GO:0004400)
0.2 0.8 GO:0008430 selenium binding(GO:0008430)
0.2 1.4 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.2 1.5 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.2 0.8 GO:0033744 L-methionine:thioredoxin-disulfide S-oxidoreductase activity(GO:0033744) L-methionine-(S)-S-oxide reductase activity(GO:0036456)
0.2 0.8 GO:0004816 asparagine-tRNA ligase activity(GO:0004816)
0.2 1.4 GO:0043495 protein anchor(GO:0043495)
0.1 0.6 GO:0080118 brassinosteroid sulfotransferase activity(GO:0080118)
0.1 0.7 GO:0045505 dynein binding(GO:0045502) dynein intermediate chain binding(GO:0045505) dynein light intermediate chain binding(GO:0051959)
0.1 1.9 GO:0016833 oxo-acid-lyase activity(GO:0016833)
0.1 0.4 GO:0033984 indole-3-glycerol-phosphate lyase activity(GO:0033984)
0.1 1.5 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.1 0.4 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.1 1.3 GO:0051903 S-(hydroxymethyl)glutathione dehydrogenase activity(GO:0051903)
0.1 3.2 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.9 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.1 0.4 GO:0015026 coreceptor activity(GO:0015026)
0.1 0.6 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.1 1.7 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.1 1.7 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.1 8.9 GO:0003777 microtubule motor activity(GO:0003777)
0.1 4.0 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.1 8.8 GO:0046910 pectinesterase inhibitor activity(GO:0046910)
0.1 3.7 GO:0008810 cellulase activity(GO:0008810)
0.1 0.3 GO:0004766 spermidine synthase activity(GO:0004766)
0.1 1.4 GO:0004312 fatty acid synthase activity(GO:0004312)
0.1 0.7 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.1 0.8 GO:0031177 phosphopantetheine binding(GO:0031177)
0.1 0.3 GO:0048027 mRNA 5'-UTR binding(GO:0048027)
0.1 1.8 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 1.2 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.1 0.7 GO:0051002 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.1 1.3 GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors(GO:0016730)
0.1 0.5 GO:0015136 sialic acid transmembrane transporter activity(GO:0015136)
0.1 0.4 GO:0003864 3-methyl-2-oxobutanoate hydroxymethyltransferase activity(GO:0003864)
0.1 3.6 GO:0008266 poly(U) RNA binding(GO:0008266)
0.1 1.3 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.1 0.5 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.1 0.4 GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.1 0.6 GO:0035620 ceramide transporter activity(GO:0035620) sphingolipid transporter activity(GO:0046624) ceramide 1-phosphate binding(GO:1902387) ceramide 1-phosphate transporter activity(GO:1902388)
0.1 0.4 GO:0015089 high-affinity copper ion transmembrane transporter activity(GO:0015089)
0.1 4.2 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 0.5 GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor(GO:0033764)
0.1 1.0 GO:0017116 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.1 0.4 GO:0036310 annealing helicase activity(GO:0036310)
0.1 1.6 GO:2001070 starch binding(GO:2001070)
0.1 0.4 GO:0016842 amidine-lyase activity(GO:0016842)
0.1 0.6 GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity(GO:0003871) methionine synthase activity(GO:0008705) 5-methyltetrahydrofolate-dependent methyltransferase activity(GO:0042084) 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity(GO:0042085)
0.1 0.5 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475)
0.1 0.5 GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water(GO:0016717)
0.1 0.5 GO:0080097 L-tryptophan:pyruvate aminotransferase activity(GO:0080097)
0.1 0.3 GO:0004044 amidophosphoribosyltransferase activity(GO:0004044)
0.1 1.8 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.1 0.7 GO:0004663 Rab geranylgeranyltransferase activity(GO:0004663)
0.1 0.8 GO:0070568 guanylyltransferase activity(GO:0070568)
0.1 0.4 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.1 0.4 GO:0035241 protein-arginine omega-N monomethyltransferase activity(GO:0035241)
0.1 0.6 GO:0017150 tRNA dihydrouridine synthase activity(GO:0017150)
0.1 0.2 GO:0019789 SUMO transferase activity(GO:0019789)
0.1 1.0 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.1 1.7 GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity(GO:0003825)
0.1 0.8 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 0.3 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.1 3.4 GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor(GO:0016655)
0.1 0.5 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.1 0.5 GO:0008296 3'-5'-exodeoxyribonuclease activity(GO:0008296)
0.1 1.2 GO:0008061 chitin binding(GO:0008061)
0.1 0.3 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.1 0.8 GO:0019158 glucokinase activity(GO:0004340) glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.1 0.3 GO:0004106 chorismate mutase activity(GO:0004106)
0.1 0.7 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.1 4.0 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 1.5 GO:0015114 phosphate ion transmembrane transporter activity(GO:0015114)
0.1 0.6 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 0.5 GO:0048365 Rac GTPase binding(GO:0048365)
0.1 0.5 GO:0008477 purine nucleosidase activity(GO:0008477)
0.1 0.3 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
0.1 0.4 GO:0042895 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.1 0.3 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.1 10.7 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.1 0.3 GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor(GO:0016726)
0.1 1.7 GO:0004525 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.1 0.8 GO:0004161 dimethylallyltranstransferase activity(GO:0004161)
0.1 0.3 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.1 1.1 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.1 0.8 GO:0000210 NAD+ diphosphatase activity(GO:0000210)
0.1 0.5 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.1 0.5 GO:0016819 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.1 0.3 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.1 0.3 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.1 0.3 GO:0052924 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.1 0.3 GO:0080132 fatty acid alpha-hydroxylase activity(GO:0080132)
0.1 1.9 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.1 0.8 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.1 0.3 GO:0070140 ubiquitin-like protein-specific isopeptidase activity(GO:0070138) SUMO-specific isopeptidase activity(GO:0070140)
0.1 2.7 GO:0008171 O-methyltransferase activity(GO:0008171)
0.1 0.7 GO:0000400 four-way junction DNA binding(GO:0000400)
0.1 1.5 GO:0030599 pectinesterase activity(GO:0030599)
0.1 4.5 GO:0004180 carboxypeptidase activity(GO:0004180)
0.1 5.1 GO:0004650 polygalacturonase activity(GO:0004650)
0.1 0.9 GO:0050308 sugar-phosphatase activity(GO:0050308)
0.1 0.2 GO:0009374 biotin binding(GO:0009374)
0.1 0.2 GO:0030275 LRR domain binding(GO:0030275)
0.1 0.3 GO:0016034 maleylacetoacetate isomerase activity(GO:0016034)
0.1 0.5 GO:0019825 oxygen binding(GO:0019825)
0.1 0.3 GO:0004112 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.1 0.3 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.1 0.4 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.1 1.1 GO:0008146 sulfotransferase activity(GO:0008146)
0.1 0.5 GO:1990538 xylan O-acetyltransferase activity(GO:1990538)
0.1 0.6 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.1 0.3 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.1 0.5 GO:0004849 uridine kinase activity(GO:0004849)
0.1 12.2 GO:0043531 ADP binding(GO:0043531)
0.1 0.8 GO:0003689 DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170)
0.1 1.8 GO:0051087 chaperone binding(GO:0051087)
0.1 0.2 GO:0004826 phenylalanine-tRNA ligase activity(GO:0004826)
0.1 0.6 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.1 0.4 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.1 0.5 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.1 0.2 GO:0050162 oxalate oxidase activity(GO:0050162)
0.1 0.1 GO:0015119 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
0.1 0.3 GO:0070042 rRNA (uridine) methyltransferase activity(GO:0016436) rRNA (uridine-N3-)-methyltransferase activity(GO:0070042)
0.1 3.2 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.1 2.5 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.1 0.3 GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.1 0.5 GO:0043047 single-stranded telomeric DNA binding(GO:0043047) sequence-specific single stranded DNA binding(GO:0098847)
0.1 0.5 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.1 0.6 GO:0030983 mismatched DNA binding(GO:0030983)
0.1 0.4 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.1 0.4 GO:0051011 microtubule minus-end binding(GO:0051011)
0.1 0.2 GO:0003919 FMN adenylyltransferase activity(GO:0003919)
0.0 0.4 GO:0004526 ribonuclease P activity(GO:0004526)
0.0 0.2 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.0 0.2 GO:0044620 ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process(GO:0000036) ACP phosphopantetheine attachment site binding(GO:0044620) prosthetic group binding(GO:0051192)
0.0 0.8 GO:0061608 nuclear import signal receptor activity(GO:0061608)
0.0 0.5 GO:0047938 glucose-6-phosphate 1-epimerase activity(GO:0047938)
0.0 0.1 GO:0016972 flavin-linked sulfhydryl oxidase activity(GO:0016971) thiol oxidase activity(GO:0016972)
0.0 0.6 GO:0030674 protein binding, bridging(GO:0030674)
0.0 1.9 GO:0008408 3'-5' exonuclease activity(GO:0008408)
0.0 0.1 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.0 0.1 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.0 0.6 GO:0045551 cinnamyl-alcohol dehydrogenase activity(GO:0045551)
0.0 0.2 GO:0003680 AT DNA binding(GO:0003680)
0.0 0.9 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.3 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.0 0.8 GO:0005227 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.0 0.3 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.0 1.7 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.2 GO:0004126 cytidine deaminase activity(GO:0004126)
0.0 2.0 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 1.2 GO:0009975 cyclase activity(GO:0009975)
0.0 5.0 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.1 GO:0046027 phospholipid:diacylglycerol acyltransferase activity(GO:0046027)
0.0 0.3 GO:0016723 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 0.4 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.0 0.5 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.3 GO:0000254 C-4 methylsterol oxidase activity(GO:0000254)
0.0 0.5 GO:0070300 phosphatidic acid binding(GO:0070300)
0.0 0.5 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.0 0.5 GO:0004176 ATP-dependent peptidase activity(GO:0004176)
0.0 9.5 GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding(GO:0000981)
0.0 0.3 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 0.6 GO:0019207 kinase regulator activity(GO:0019207)
0.0 0.4 GO:0004084 branched-chain-amino-acid transaminase activity(GO:0004084)
0.0 0.2 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.0 0.3 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.0 0.1 GO:0004072 aspartate kinase activity(GO:0004072)
0.0 1.0 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.0 0.2 GO:0010429 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.0 0.2 GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity(GO:0080019)
0.0 0.1 GO:0008022 protein C-terminus binding(GO:0008022)
0.0 1.1 GO:0016759 cellulose synthase activity(GO:0016759)
0.0 0.3 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.0 0.1 GO:0033741 adenylyl-sulfate reductase activity(GO:0009973) adenylyl-sulfate reductase (glutathione) activity(GO:0033741)
0.0 0.3 GO:0070180 large ribosomal subunit rRNA binding(GO:0070180)
0.0 0.1 GO:0004623 phospholipase A2 activity(GO:0004623)
0.0 0.2 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.0 0.2 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.0 0.2 GO:0032977 membrane insertase activity(GO:0032977)
0.0 0.3 GO:0008097 5S rRNA binding(GO:0008097)
0.0 0.1 GO:0051019 mitogen-activated protein kinase binding(GO:0051019)
0.0 0.3 GO:0031559 lanosterol synthase activity(GO:0000250) oxidosqualene cyclase activity(GO:0031559)
0.0 27.8 GO:0003700 nucleic acid binding transcription factor activity(GO:0001071) transcription factor activity, sequence-specific DNA binding(GO:0003700)
0.0 1.8 GO:0008422 beta-glucosidase activity(GO:0008422)
0.0 0.4 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.4 GO:0005384 manganese ion transmembrane transporter activity(GO:0005384)
0.0 0.1 GO:0004848 ureidoglycolate hydrolase activity(GO:0004848)
0.0 0.1 GO:0010011 auxin binding(GO:0010011)
0.0 0.2 GO:0061505 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.0 0.1 GO:0043855 intracellular cyclic nucleotide activated cation channel activity(GO:0005221) cyclic nucleotide-gated ion channel activity(GO:0043855)
0.0 0.1 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.0 0.3 GO:0043138 3'-5' DNA helicase activity(GO:0043138)
0.0 0.2 GO:0019210 kinase inhibitor activity(GO:0019210)
0.0 0.1 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.0 3.6 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.4 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.1 GO:0004792 thiosulfate sulfurtransferase activity(GO:0004792)
0.0 2.1 GO:0008168 methyltransferase activity(GO:0008168)
0.0 0.1 GO:0015271 outward rectifier potassium channel activity(GO:0015271)
0.0 0.1 GO:0030942 endoplasmic reticulum signal peptide binding(GO:0030942)
0.0 0.2 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.0 0.2 GO:0004029 aldehyde dehydrogenase (NAD) activity(GO:0004029)
0.0 3.9 GO:0020037 heme binding(GO:0020037)
0.0 0.2 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.0 0.1 GO:0017108 5'-flap endonuclease activity(GO:0017108)
0.0 0.1 GO:0003872 6-phosphofructokinase activity(GO:0003872)
0.0 0.8 GO:0008017 microtubule binding(GO:0008017)
0.0 0.0 GO:0008443 phosphofructokinase activity(GO:0008443)
0.0 0.1 GO:0035312 5'-3' exodeoxyribonuclease activity(GO:0035312)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 2.2 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.5 1.6 PID IL8 CXCR1 PATHWAY IL8- and CXCR1-mediated signaling events
0.5 0.5 PID REELIN PATHWAY Reelin signaling pathway
0.3 2.1 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.3 0.8 PID IL8 CXCR2 PATHWAY IL8- and CXCR2-mediated signaling events
0.3 1.3 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.3 2.3 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.2 0.8 PID MYC REPRESS PATHWAY Validated targets of C-MYC transcriptional repression
0.2 0.5 PID P53 REGULATION PATHWAY p53 pathway
0.2 0.7 PID FANCONI PATHWAY Fanconi anemia pathway
0.1 0.1 PID LYSOPHOSPHOLIPID PATHWAY LPA receptor mediated events
0.1 0.4 PID ARF6 DOWNSTREAM PATHWAY Arf6 downstream pathway
0.1 0.5 PID TELOMERASE PATHWAY Regulation of Telomerase
0.1 0.9 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.1 0.6 PID E2F PATHWAY E2F transcription factor network
0.1 0.1 SA G1 AND S PHASES Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition.
0.1 0.4 PID ATR PATHWAY ATR signaling pathway
0.1 0.2 ST FAS SIGNALING PATHWAY Fas Signaling Pathway
0.1 0.2 PID AP1 PATHWAY AP-1 transcription factor network
0.1 0.1 PID ATM PATHWAY ATM pathway
0.1 0.5 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.0 0.3 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway
0.0 0.0 PID NFAT TFPATHWAY Calcineurin-regulated NFAT-dependent transcription in lymphocytes

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 3.4 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
0.9 5.5 REACTOME REVERSIBLE HYDRATION OF CARBON DIOXIDE Genes involved in Reversible Hydration of Carbon Dioxide
0.5 1.6 REACTOME SPRY REGULATION OF FGF SIGNALING Genes involved in Spry regulation of FGF signaling
0.5 1.6 REACTOME PURINE METABOLISM Genes involved in Purine metabolism
0.4 1.3 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation
0.4 1.1 REACTOME TRANSCRIPTIONAL ACTIVITY OF SMAD2 SMAD3 SMAD4 HETEROTRIMER Genes involved in Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer
0.3 1.5 REACTOME GOLGI ASSOCIATED VESICLE BIOGENESIS Genes involved in Golgi Associated Vesicle Biogenesis
0.3 0.8 REACTOME GLYCOSPHINGOLIPID METABOLISM Genes involved in Glycosphingolipid metabolism
0.3 1.0 REACTOME FANCONI ANEMIA PATHWAY Genes involved in Fanconi Anemia pathway
0.2 0.7 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.2 0.2 REACTOME SEMAPHORIN INTERACTIONS Genes involved in Semaphorin interactions
0.2 0.6 REACTOME FORMATION OF TUBULIN FOLDING INTERMEDIATES BY CCT TRIC Genes involved in Formation of tubulin folding intermediates by CCT/TriC
0.2 1.0 REACTOME GLUCOSE TRANSPORT Genes involved in Glucose transport
0.2 0.6 REACTOME MHC CLASS II ANTIGEN PRESENTATION Genes involved in MHC class II antigen presentation
0.1 0.6 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.1 0.8 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.1 0.4 REACTOME VEGF LIGAND RECEPTOR INTERACTIONS Genes involved in VEGF ligand-receptor interactions
0.1 1.5 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.1 0.3 REACTOME REGULATION OF SIGNALING BY CBL Genes involved in Regulation of signaling by CBL
0.1 0.6 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.1 0.2 REACTOME GASTRIN CREB SIGNALLING PATHWAY VIA PKC AND MAPK Genes involved in Gastrin-CREB signalling pathway via PKC and MAPK
0.1 0.2 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.0 0.1 REACTOME GENERIC TRANSCRIPTION PATHWAY Genes involved in Generic Transcription Pathway
0.0 0.4 REACTOME GPCR LIGAND BINDING Genes involved in GPCR ligand binding
0.0 0.1 REACTOME DOUBLE STRAND BREAK REPAIR Genes involved in Double-Strand Break Repair
0.0 0.1 REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES Genes involved in Recruitment of mitotic centrosome proteins and complexes
0.0 0.1 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.0 0.2 REACTOME SIGNALING BY ERBB4 Genes involved in Signaling by ERBB4
0.0 0.1 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.0 0.2 REACTOME MEIOTIC RECOMBINATION Genes involved in Meiotic Recombination
0.0 0.1 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis