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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT5G02320

Z-value: 1.38

Transcription factors associated with AT5G02320

Gene Symbol Gene ID Gene Info
AT5G02320
AT5G02320 myb domain protein 3r-5

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
MYB3R-5arTal_v1_Chr5_-_486434_486473-0.802.5e-07Click!

Activity profile of AT5G02320 motif

Sorted Z-values of AT5G02320 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_+_5556710 7.26 AT3G16370.1
AT3G16370
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_+_26298728 6.66 AT5G65730.1
XTH6
xyloglucan endotransglucosylase/hydrolase 6
Chr1_+_10375754 6.50 AT1G29670.1
AT1G29670
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr2_+_9844134 6.49 AT2G23130.1
AT2G23130.2
AGP17
arabinogalactan protein 17
Chr1_+_10375599 6.44 AT1G29670.2
AT1G29670
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr2_+_2199151 5.89 AT2G05790.1
AT2G05790
O-Glycosyl hydrolases family 17 protein
Chr3_+_23345754 5.72 AT3G63200.1
PLP9
PATATIN-like protein 9
Chr2_-_9062093 5.69 AT2G21140.1
PRP2
proline-rich protein 2
Chr1_-_598657 5.68 AT1G02730.1
CSLD5
cellulose synthase-like D5
Chr1_+_3008910 5.45 AT1G09310.1
AT1G09310
plant/protein (Protein of unknown function, DUF538)
Chr1_+_29575806 5.42 AT1G78630.1
emb1473
Ribosomal protein L13 family protein
Chr1_-_4530222 5.34 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
Chr3_-_2334185 5.31 AT3G07320.1
AT3G07320
O-Glycosyl hydrolases family 17 protein
Chr3_-_23328789 5.23 AT3G63140.1
CSP41A
chloroplast stem-loop binding protein of 41 kDa
Chr1_+_17918207 5.20 AT1G48480.1
RKL1
receptor-like kinase 1
Chr1_+_27452748 5.13 AT1G72970.1
AT1G72970.2
HTH
Glucose-methanol-choline (GMC) oxidoreductase family protein
Chr1_+_10477885 5.12 AT1G29930.1
CAB1
chlorophyll A/B binding protein 1
Chr4_+_15401640 5.12 AT4G31840.1
ENODL15
early nodulin-like protein 15
Chr1_-_28419635 5.11 AT1G75680.1
GH9B7
glycosyl hydrolase 9B7
Chr4_+_6408007 5.04 AT4G10340.1
LHCB5
light harvesting complex of photosystem II 5
Chr5_+_7502427 4.96 AT5G22580.1
AT5G22580
Stress responsive A/B Barrel Domain-containing protein
Chr4_-_1026179 4.90 AT4G02320.1
AT4G02320
Plant invertase/pectin methylesterase inhibitor superfamily
Chr3_-_20903080 4.76 AT3G56370.1
AT3G56370
Leucine-rich repeat protein kinase family protein
Chr4_+_620691 4.73 AT4G01460.1
AT4G01460.2
AT4G01460
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr1_-_26515188 4.71 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
Chr3_+_10017321 4.66 AT3G27160.1
AT3G27160.2
GHS1
Ribosomal protein S21 family protein
Chr4_-_13958107 4.62 AT4G28080.1
AT4G28080
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_-_84864 4.61 AT1G01190.1
AT1G01190.2
CYP78A8
cytochrome P450, family 78, subfamily A, polypeptide 8
Chr5_-_21068327 4.58 AT5G51820.1
PGM
phosphoglucomutase
Chr4_+_16708552 4.53 AT4G35100.2
PIP3
plasma membrane intrinsic protein 3
Chr5_+_208866 4.53 AT5G01530.1
LHCB4.1
light harvesting complex photosystem II
Chr4_+_16708361 4.53 AT4G35100.1
PIP3
plasma membrane intrinsic protein 3
Chr5_+_16468327 4.53 AT5G41140.1
AT5G41140.2
AT5G41140
Myosin heavy chain-related protein
Chr5_-_17581275 4.52 AT5G43750.1
PnsB5
NAD(P)H dehydrogenase 18
Chr3_+_4956349 4.50 AT3G14760.1
AT3G14760
transmembrane protein
Chr5_-_20637996 4.48 AT5G50740.1
AT5G50740.2
AT5G50740.4
AT5G50740.3
AT5G50740.5
AT5G50740
Heavy metal transport/detoxification superfamily protein
Chr4_-_7353117 4.44 AT4G12420.1
AT4G12420.2
SKU5
Cupredoxin superfamily protein
Chr1_-_1063809 4.41 AT1G04110.1
SDD1
Subtilase family protein
Chr2_-_12277417 4.39 AT2G28630.2
KCS12
3-ketoacyl-CoA synthase 12
Chr2_+_18286321 4.32 AT2G44230.1
AT2G44230
hypothetical protein (DUF946)
Chr2_-_19563960 4.30 AT2G47750.1
GH3.9
putative indole-3-acetic acid-amido synthetase GH3.9
Chr5_-_3270957 4.28 AT5G10400.1
AT5G10400
Histone superfamily protein
Chr2_-_12277245 4.26 AT2G28630.1
KCS12
3-ketoacyl-CoA synthase 12
Chr1_-_1307973 4.26 AT1G04680.1
AT1G04680
Pectin lyase-like superfamily protein
Chr3_+_17949416 4.18 AT3G48460.1
AT3G48460
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_+_22474142 4.17 AT5G55480.1
SVL1
SHV3-like 1
Chr5_-_3278461 4.15 AT5G10430.1
AGP4
arabinogalactan protein 4
Chr3_-_6436046 4.07 AT3G18710.1
PUB29
plant U-box 29
Chr5_-_5310951 4.00 AT5G16250.1
AT5G16250
transmembrane protein
Chr4_-_14204061 3.96 AT4G28750.1
PSAE-1
Photosystem I reaction centre subunit IV / PsaE protein
Chr2_-_12646057 3.95 AT2G29550.1
TUB7
tubulin beta-7 chain
Chr4_-_16384468 3.92 AT4G34220.1
AT4G34220
Leucine-rich repeat protein kinase family protein
Chr5_-_4061950 3.92 AT5G12860.2
DiT1
dicarboxylate transporter 1
Chr5_+_6387341 3.90 AT5G19090.1
AT5G19090.4
AT5G19090.3
AT5G19090.2
AT5G19090
Heavy metal transport/detoxification superfamily protein
Chr5_-_26501955 3.89 AT5G66330.1
AT5G66330
Leucine-rich repeat (LRR) family protein
Chr4_-_8016582 3.89 AT4G13840.1
AT4G13840
HXXXD-type acyl-transferase family protein
Chr5_-_4062289 3.87 AT5G12860.1
DiT1
dicarboxylate transporter 1
Chr1_-_18690503 3.87 AT1G50450.1
AT1G50450
Saccharopine dehydrogenase
Chr5_+_7394443 3.82 AT5G22340.1
AT5G22340.2
AT5G22340
NF-kappa-B inhibitor-like protein
Chr1_-_25649254 3.80 AT1G68400.1
AT1G68400
leucine-rich repeat transmembrane protein kinase family protein
Chr3_-_23417119 3.78 AT3G63410.1
APG1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr3_+_4128334 3.76 AT3G12930.1
AT3G12930
Lojap-related protein
Chr2_+_15445294 3.75 AT2G36830.1
GAMMA-TIP
gamma tonoplast intrinsic protein
Chr3_+_22902491 3.74 AT3G61870.1
AT3G61870.2
AT3G61870
plant/protein
Chr4_+_1415953 3.72 AT4G03210.2
XTH9
xyloglucan endotransglucosylase/hydrolase 9
Chr4_+_418327 3.70 AT4G00970.1
AT4G00970.2
CRK41
cysteine-rich RLK (RECEPTOR-like protein kinase) 41
Chr4_-_1268612 3.70 AT4G02850.1
AT4G02850
phenazine biosynthesis PhzC/PhzF family protein
Chr1_+_9259750 3.67 AT1G26770.2
EXPA10
expansin A10
Chr2_-_7768040 3.67 AT2G17880.1
AT2G17880
Chaperone DnaJ-domain superfamily protein
Chr5_-_1861656 3.63 AT5G06150.2
AT5G06150.1
CYC1BAT
Cyclin family protein
Chr1_-_6278150 3.62 AT1G18250.2
AT1G18250.1
ATLP-1
Pathogenesis-related thaumatin superfamily protein
Chr2_+_10662190 3.61 AT2G25060.1
ENODL14
early nodulin-like protein 14
Chr4_-_13496738 3.61 AT4G26830.1
AT4G26830.2
AT4G26830
O-Glycosyl hydrolases family 17 protein
Chr1_+_9259432 3.60 AT1G26770.1
EXPA10
expansin A10
Chr1_+_1843463 3.58 AT1G06080.1
AT1G06080.2
ADS1
delta 9 desaturase 1
Chr3_-_19791695 3.55 AT3G53380.1
AT3G53380
Concanavalin A-like lectin protein kinase family protein
Chr5_+_7778017 3.53 AT5G23120.2
AT5G23120.1
HCF136
photosystem II stability/assembly factor, chloroplast (HCF136)
Chr1_-_28603932 3.53 AT1G76240.1
AT1G76240
DUF241 domain protein (DUF241)
Chr1_-_8940613 3.50 AT1G25450.1
KCS5
3-ketoacyl-CoA synthase 5
Chr4_-_8350030 3.48 AT4G14550.4
IAA14
indole-3-acetic acid inducible 14
Chr4_+_10231218 3.44 AT4G18570.2
AT4G18570.1
AT4G18570
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_+_26646900 3.42 AT5G66740.1
AT5G66740
spindle assembly abnormal protein (DUF620)
Chr4_+_1415617 3.40 AT4G03210.1
XTH9
xyloglucan endotransglucosylase/hydrolase 9
Chr5_-_23406479 3.40 AT5G57780.1
P1R1
transcription factor
Chr1_+_19879405 3.39 AT1G53300.1
TTL1
tetratricopetide-repeat thioredoxin-like 1
Chr5_+_23374873 3.36 AT5G57700.3
AT5G57700.2
AT5G57700.1
AT5G57700.5
AT5G57700
BNR/Asp-box repeat family protein
Chr2_-_5051613 3.36 AT2G12462.1
AT2G12462
sterile alpha motif (SAM) domain protein
Chr5_-_21992812 3.33 AT5G54190.2
AT5G54190.1
PORA
protochlorophyllide oxidoreductase A
Chr2_+_12874465 3.32 AT2G30150.2
AT2G30150
UDP-Glycosyltransferase superfamily protein
Chr2_+_7301334 3.32 AT2G16850.1
PIP2%3B8
plasma membrane intrinsic protein 2;8
Chr2_+_11481326 3.31 AT2G26910.1
ABCG32
pleiotropic drug resistance 4
Chr2_+_11856571 3.29 AT2G27820.1
PD1
prephenate dehydratase 1
Chr5_-_19404147 3.29 AT5G47920.1
AT5G47920
transcription elongation factor
Chr2_-_12785037 3.23 AT2G29980.2
FAD3
fatty acid desaturase 3
Chr3_-_22295529 3.21 AT3G60320.1
AT3G60320
bZIP domain class transcription factor (DUF630 and DUF632)
Chr2_+_12874706 3.21 AT2G30150.1
AT2G30150
UDP-Glycosyltransferase superfamily protein
Chr3_+_21680027 3.19 AT3G58620.1
AT3G58620.2
TTL4
tetratricopetide-repeat thioredoxin-like 4
Chr2_-_12785190 3.18 AT2G29980.1
FAD3
fatty acid desaturase 3
Chr4_+_17524461 3.18 AT4G37240.1
AT4G37240
HTH-type transcriptional regulator
Chr4_-_8350263 3.15 AT4G14550.1
AT4G14550.2
AT4G14550.3
IAA14
indole-3-acetic acid inducible 14
Chr2_-_18421110 3.15 AT2G44650.1
CHL-CPN10
chloroplast chaperonin 10
Chr4_-_14002069 3.15 AT4G28250.2
AT4G28250.3
AT4G28250.4
AT4G28250.1
EXPB3
expansin B3
Chr1_-_3443957 3.13 AT1G10470.3
AT1G10470.2
ARR4
response regulator 4
Chr5_+_18537239 3.11 AT5G45700.1
AT5G45700
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_-_26845294 3.10 AT5G67280.1
RLK
receptor-like kinase
Chr3_+_22453668 3.10 AT3G60750.1
AT3G60750.2
AT3G60750
Transketolase
Chr4_+_10259600 3.09 AT4G18640.1
MRH1
Leucine-rich repeat protein kinase family protein
Chr4_-_18190556 3.09 AT4G39040.2
AT4G39040.1
AT4G39040
RNA-binding CRS1 / YhbY (CRM) domain protein
Chr1_-_3444360 3.09 AT1G10470.1
ARR4
response regulator 4
Chr5_+_19179881 3.09 AT5G47230.1
ERF5
ethylene responsive element binding factor 5
Chr5_+_4156501 3.03 AT5G13100.1
AT5G13100
Gap junction beta-4 protein
Chr3_+_8624636 3.02 AT3G23890.1
AT3G23890.2
TOPII
topoisomerase II
Chr5_-_24728244 3.01 AT5G61480.1
PXY
Leucine-rich repeat protein kinase family protein
Chr1_+_4247218 3.00 AT1G12460.1
AT1G12460.2
AT1G12460
Leucine-rich repeat protein kinase family protein
Chr5_+_72292 2.99 AT5G01190.2
AT5G01190.1
LAC10
laccase 10
Chr2_-_444324 2.99 AT2G01950.1
BRL2
BRI1-like 2
Chr3_+_19037140 2.99 AT3G51280.1
AT3G51280
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_+_19932114 2.96 AT5G49160.1
AT5G49160.2
MET1
methyltransferase 1
Chr1_+_4084162 2.95 AT1G12080.1
AT1G12080.2
AT1G12080
Vacuolar calcium-binding protein-like protein
Chr1_+_17123785 2.95 AT1G45201.3
AT1G45201.1
AT1G45201.2
TLL1
triacylglycerol lipase-like 1
Chr1_-_23251195 2.95 AT1G62780.1
AT1G62780
dimethylallyl, adenosine tRNA methylthiotransferase
Chr5_-_3057447 2.94 AT5G09820.3
AT5G09820.2
AT5G09820.1
AT5G09820
Plastid-lipid associated protein PAP / fibrillin family protein
Chr2_+_15934244 2.93 AT2G38080.1
IRX12
Laccase/Diphenol oxidase family protein
Chr4_-_14453966 2.92 AT4G29360.2
AT4G29360.1
AT4G29360
O-Glycosyl hydrolases family 17 protein
Chr5_+_23167774 2.91 AT5G57180.1
AT5G57180.2
AT5G57180.4
AT5G57180.3
CIA2
chloroplast import apparatus 2
Chr1_-_28953580 2.90 AT1G77060.1
AT1G77060
Phosphoenolpyruvate carboxylase family protein
Chr3_+_6465748 2.89 AT3G18773.1
AT3G18773
RING/U-box superfamily protein
Chr2_+_11401118 2.88 AT2G26760.1
CYCB1%3B4
Cyclin B1;4
Chr5_-_26129547 2.86 AT5G65390.1
AGP7
arabinogalactan protein 7
Chr5_+_6387735 2.85 AT5G19090.5
AT5G19090
Heavy metal transport/detoxification superfamily protein
Chr4_-_11021272 2.83 AT4G20430.2
AT4G20430.1
AT4G20430.3
AT4G20430
Subtilase family protein
Chr1_+_5828915 2.83 AT1G17050.1
SPS2
solanesyl diphosphate synthase 2
Chr1_+_29178705 2.81 AT1G77640.1
AT1G77640
Integrase-type DNA-binding superfamily protein
Chr2_+_7666548 2.79 AT2G17630.1
AT2G17630
Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
Chr4_-_10316886 2.77 AT4G18780.1
IRX1
cellulose synthase family protein
Chr3_+_377025 2.76 AT3G02120.1
AT3G02120
hydroxyproline-rich glycoprotein family protein
Chr2_-_12270020 2.74 AT2G28620.3
AT2G28620.1
AT2G28620
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr2_+_8736734 2.73 AT2G20260.1
PSAE-2
photosystem I subunit E-2
Chr1_+_3031046 2.73 AT1G09390.1
AT1G09390
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_4384304 2.72 AT1G12860.1
AT1G12860.2
AT1G12860.3
SCRM2
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr4_+_17254290 2.72 AT4G36570.1
RL3
RAD-like 3
Chr2_-_2272452 2.71 AT2G05920.1
AT2G05920
Subtilase family protein
Chr1_-_10845242 2.71 AT1G30600.1
AT1G30600
Subtilase family protein
Chr2_+_15686650 2.71 AT2G37380.1
MAKR3
membrane-associated kinase regulator
Chr5_+_908563 2.70 AT5G03590.3
AT5G03590.1
AT5G03590
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_-_2711000 2.69 AT1G08560.1
SYP111
syntaxin of plants 111
Chr5_-_5841690 2.69 AT5G17710.1
AT5G17710.3
AT5G17710.2
EMB1241
Co-chaperone GrpE family protein
Chr2_-_7048544 2.67 AT2G16270.1
AT2G16270
transmembrane protein
Chr3_+_5267063 2.67 AT3G15548.1
AT3G15550.1
AT3G15548
AT3G15550
transmembrane protein
trichohyalin
Chr2_-_10277266 2.66 AT2G24170.1
AT2G24170.2
AT2G24170
Endomembrane protein 70 protein family
Chr4_-_12581167 2.65 AT4G24265.1
AT4G24265.3
AT4G24265.2
AT4G24265
homeobox protein
Chr3_-_11924574 2.65 AT3G30300.1
AT3G30300.2
AT3G30300
O-fucosyltransferase family protein
Chr2_-_918671 2.65 AT2G03090.1
EXPA15
expansin A15
Chr4_+_12366851 2.63 AT4G23740.2
AT4G23740
Leucine-rich repeat protein kinase family protein
Chr2_-_14584797 2.63 AT2G34640.1
PTAC12
plastid transcriptionally active 12
Chr5_+_26572265 2.63 AT5G66580.1
AT5G66580
hypothetical protein
Chr4_-_16046937 2.63 AT4G33270.1
CDC20.1
Transducin family protein / WD-40 repeat family protein
Chr5_-_21767013 2.62 AT5G53580.1
PLR1
NAD(P)-linked oxidoreductase superfamily protein
Chr5_+_15641442 2.61 AT5G39080.1
AT5G39080
HXXXD-type acyl-transferase family protein
Chr1_+_6679281 2.61 AT1G19320.1
AT1G19320
Pathogenesis-related thaumatin superfamily protein
Chr3_+_19188844 2.59 AT3G51740.1
IMK2
inflorescence meristem receptor-like kinase 2
Chr4_-_12945052 2.58 AT4G25290.1
AT4G25290
DNA photolyase
Chr5_+_17714390 2.58 AT5G44030.2
AT5G44030.1
CESA4
cellulose synthase A4
Chr2_-_18250779 2.57 AT2G44120.2
AT2G44120
Ribosomal protein L30/L7 family protein
Chr4_-_12068538 2.57 AT4G23020.2
AT4G23020.1
TRM11
hypothetical protein
Chr1_-_26765285 2.57 AT1G70985.1
AT1G70985
hydroxyproline-rich glycoprotein family protein
Chr2_+_14098778 2.56 AT2G33255.1
AT2G33255
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr4_+_12366082 2.56 AT4G23740.1
AT4G23740
Leucine-rich repeat protein kinase family protein
Chr1_+_1198303 2.56 AT1G04430.3
AT1G04430.2
AT1G04430
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr2_+_10072057 2.56 AT2G23690.1
AT2G23690
HTH-type transcriptional regulator
Chr5_+_25948954 2.56 AT5G64940.1
AT5G64940.2
ATH13
ABC2 homolog 13
Chr5_-_358962 2.55 AT5G01910.2
AT5G01910.1
AT5G01910
myelin transcription factor
Chr5_-_17624359 2.55 AT5G43830.1
AT5G43830
aluminum induced protein with YGL and LRDR motifs
Chr5_+_908251 2.54 AT5G03590.2
AT5G03590
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_23481907 2.51 AT1G63300.1
AT1G63300
Myosin heavy chain-related protein
Chr4_-_17287477 2.49 AT4G36660.1
AT4G36660
polyol transporter, putative (DUF1195)
Chr5_-_19272892 2.49 AT5G47500.1
PME5
Pectin lyase-like superfamily protein
Chr2_-_18706266 2.48 AT2G45400.4
AT2G45400.2
AT2G45400.1
BEN1
NAD(P)-binding Rossmann-fold superfamily protein
Chr2_-_18251156 2.48 AT2G44120.1
AT2G44120
Ribosomal protein L30/L7 family protein
Chr1_+_1197956 2.48 AT1G04430.1
AT1G04430
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_+_13448599 2.47 AT4G26660.1
AT4G26660
kinesin-like protein
Chr1_+_25493193 2.46 AT1G68010.1
AT1G68010.2
AT1G68010.3
HPR
hydroxypyruvate reductase
Chr5_-_17650375 2.45 AT5G43890.1
YUC5
Flavin-binding monooxygenase family protein
Chr1_+_564018 2.45 AT1G02640.1
BXL2
beta-xylosidase 2
Chr5_+_23375170 2.43 AT5G57700.4
AT5G57700
BNR/Asp-box repeat family protein
Chr5_+_26461152 2.43 AT5G66230.2
AT5G66220.1
AT5G66230
AT5G66220
Chalcone-flavanone isomerase family protein
Chalcone-flavanone isomerase family protein
Chr5_+_19595536 2.43 AT5G48360.1
AT5G48360
Actin-binding FH2 (formin homology 2) family protein
Chr4_+_7962428 2.43 AT4G13710.1
AT4G13710.2
AT4G13710
Pectin lyase-like superfamily protein
Chr5_-_14623093 2.43 AT5G37010.1
AT5G37010
rho GTPase-activating protein
Chr1_-_27496969 2.43 AT1G73110.1
AT1G73110
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr4_-_13336230 2.42 AT4G26370.2
AT4G26370.3
AT4G26370.1
AT4G26370
antitermination NusB domain-containing protein
Chr5_+_19031301 2.41 AT5G46880.1
AT5G46880.3
HB-7
homeobox-7
Chr4_+_11941001 2.41 AT4G22730.2
AT4G22730.1
AT4G22730
Leucine-rich repeat protein kinase family protein
Chr1_+_29345851 2.40 AT1G78040.2
AT1G78040
Pollen Ole e 1 allergen and extensin family protein
Chr1_-_24062804 2.40 AT1G64780.1
AMT1%3B2
ammonium transporter 1;2
Chr1_+_29345662 2.40 AT1G78040.3
AT1G78040
Pollen Ole e 1 allergen and extensin family protein
Chr3_+_9503056 2.39 AT3G25980.4
AT3G25980.3
AT3G25980.1
AT3G25980.2
MAD2
DNA-binding HORMA family protein
Chr5_+_25451800 2.38 AT5G63570.1
AT5G63570.2
GSA1
glutamate-1-semialdehyde-2,1-aminomutase
Chr5_+_3032375 2.38 AT5G09760.1
AT5G09760
Plant invertase/pectin methylesterase inhibitor superfamily
Chr5_+_7880272 2.38 AT5G23400.1
AT5G23400
Leucine-rich repeat (LRR) family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT5G02320

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
2.6 7.8 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
1.4 4.1 GO:0010198 synergid death(GO:0010198)
1.1 3.3 GO:0080051 cutin transport(GO:0080051)
1.0 3.0 GO:0010069 zygote asymmetric cytokinesis in embryo sac(GO:0010069)
0.9 6.6 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.9 3.8 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.9 4.6 GO:0007349 cellularization(GO:0007349)
0.9 4.6 GO:0009590 detection of gravity(GO:0009590)
0.9 2.6 GO:0090227 regulation of red or far-red light signaling pathway(GO:0090227)
0.9 4.4 GO:0050810 regulation of brassinosteroid biosynthetic process(GO:0010422) regulation of steroid metabolic process(GO:0019218) regulation of steroid biosynthetic process(GO:0050810) regulation of steroid hormone biosynthetic process(GO:0090030)
0.9 2.6 GO:0042817 pyridoxal metabolic process(GO:0042817) pyridine-containing compound catabolic process(GO:0072526)
0.9 2.6 GO:1901031 regulation of response to reactive oxygen species(GO:1901031)
0.8 1.7 GO:0090224 regulation of mitotic spindle organization(GO:0060236) regulation of spindle organization(GO:0090224)
0.8 3.4 GO:0080003 thalianol metabolic process(GO:0080003)
0.8 4.9 GO:0016572 histone phosphorylation(GO:0016572)
0.8 5.3 GO:0010067 procambium histogenesis(GO:0010067)
0.7 2.8 GO:0010116 positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.7 13.1 GO:0006949 syncytium formation(GO:0006949)
0.7 3.3 GO:0009647 skotomorphogenesis(GO:0009647)
0.7 3.3 GO:0006571 tyrosine biosynthetic process(GO:0006571)
0.7 2.0 GO:0006658 phosphatidylserine metabolic process(GO:0006658) phosphatidylserine biosynthetic process(GO:0006659)
0.6 3.2 GO:0007142 male meiosis II(GO:0007142)
0.6 14.7 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.6 3.0 GO:0080175 phragmoplast microtubule organization(GO:0080175)
0.6 1.7 GO:0006557 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.5 12.6 GO:0010103 stomatal complex morphogenesis(GO:0010103)
0.5 3.6 GO:0051125 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.5 11.1 GO:0042044 water transport(GO:0006833) fluid transport(GO:0042044)
0.5 3.0 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.5 4.6 GO:1904668 positive regulation of ubiquitin protein ligase activity(GO:1904668)
0.5 1.8 GO:0006561 proline biosynthetic process(GO:0006561)
0.5 2.7 GO:0010444 guard mother cell differentiation(GO:0010444)
0.4 5.1 GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000463)
0.4 1.3 GO:1904667 negative regulation of protein ubiquitination(GO:0031397) negative regulation of ligase activity(GO:0051352) negative regulation of ubiquitin-protein transferase activity(GO:0051444) regulation of ubiquitin protein ligase activity(GO:1904666) negative regulation of ubiquitin protein ligase activity(GO:1904667)
0.4 1.2 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.4 1.6 GO:0072502 cellular phosphate ion homeostasis(GO:0030643) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.4 0.4 GO:0042177 negative regulation of protein catabolic process(GO:0042177)
0.4 1.2 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.4 5.2 GO:0032544 plastid translation(GO:0032544)
0.4 1.2 GO:0071163 DNA replication preinitiation complex assembly(GO:0071163)
0.4 3.5 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.4 10.0 GO:0006636 unsaturated fatty acid biosynthetic process(GO:0006636)
0.4 5.2 GO:0045839 negative regulation of mitotic nuclear division(GO:0045839)
0.4 11.4 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.3 1.7 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.3 4.8 GO:0010274 hydrotropism(GO:0010274)
0.3 1.6 GO:0010390 histone monoubiquitination(GO:0010390)
0.3 4.7 GO:0046501 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.3 0.9 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.3 1.3 GO:0071415 cellular response to alkaloid(GO:0071312) cellular response to caffeine(GO:0071313) cellular response to purine-containing compound(GO:0071415) negative regulation of cellular response to caffeine(GO:1901181)
0.3 0.6 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.3 0.9 GO:0033567 DNA replication, Okazaki fragment processing(GO:0033567)
0.3 2.5 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.3 1.5 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.3 1.2 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.3 0.9 GO:1904215 regulation of protein import into chloroplast stroma(GO:1904215)
0.3 2.7 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.3 3.5 GO:0006526 arginine biosynthetic process(GO:0006526)
0.3 2.6 GO:0010205 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.3 19.8 GO:0007018 microtubule-based movement(GO:0007018)
0.3 1.4 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.3 1.7 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.3 1.4 GO:0071715 icosanoid secretion(GO:0032309) arachidonic acid secretion(GO:0050482) icosanoid transport(GO:0071715) fatty acid derivative transport(GO:1901571) arachidonate transport(GO:1903963)
0.3 1.7 GO:0009662 etioplast organization(GO:0009662)
0.3 1.1 GO:0033206 meiotic cytokinesis(GO:0033206)
0.3 3.3 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.3 3.5 GO:1901141 regulation of lignin biosynthetic process(GO:1901141)
0.3 0.8 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.3 1.3 GO:0010226 response to lithium ion(GO:0010226)
0.3 1.6 GO:0006021 inositol biosynthetic process(GO:0006021)
0.3 3.6 GO:0000712 resolution of meiotic recombination intermediates(GO:0000712)
0.3 6.1 GO:0048768 root hair cell tip growth(GO:0048768)
0.2 3.0 GO:0010232 vascular transport(GO:0010232) phloem transport(GO:0010233)
0.2 1.0 GO:0043693 monoterpene biosynthetic process(GO:0043693)
0.2 3.9 GO:0048759 xylem vessel member cell differentiation(GO:0048759)
0.2 2.6 GO:0080086 stamen filament development(GO:0080086)
0.2 0.7 GO:0032978 protein insertion into membrane from inner side(GO:0032978) protein insertion into mitochondrial membrane from inner side(GO:0032979) protein insertion into mitochondrial membrane(GO:0051204)
0.2 14.2 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.2 0.9 GO:0034635 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.2 2.1 GO:0010951 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.2 1.7 GO:0031222 arabinan catabolic process(GO:0031222)
0.2 2.5 GO:0052324 plant-type cell wall cellulose biosynthetic process(GO:0052324)
0.2 4.7 GO:0042335 cuticle development(GO:0042335)
0.2 1.8 GO:0006549 isoleucine metabolic process(GO:0006549) isoleucine biosynthetic process(GO:0009097)
0.2 1.7 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.2 1.3 GO:0006000 fructose metabolic process(GO:0006000)
0.2 0.9 GO:0097468 cell death in response to oxidative stress(GO:0036473) programmed cell death in response to reactive oxygen species(GO:0097468)
0.2 1.1 GO:0070982 L-asparagine biosynthetic process(GO:0070981) L-asparagine metabolic process(GO:0070982)
0.2 0.9 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.2 5.9 GO:0010025 wax biosynthetic process(GO:0010025)
0.2 0.6 GO:0010495 long-distance posttranscriptional gene silencing(GO:0010495)
0.2 2.7 GO:0010332 response to gamma radiation(GO:0010332)
0.2 1.1 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.2 2.9 GO:0033238 regulation of cellular amino acid metabolic process(GO:0006521) regulation of cellular amine metabolic process(GO:0033238)
0.1 1.6 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.1 1.2 GO:0016103 diterpenoid catabolic process(GO:0016103) gibberellin catabolic process(GO:0045487)
0.1 1.5 GO:0006783 heme biosynthetic process(GO:0006783)
0.1 1.0 GO:2000762 regulation of phenylpropanoid metabolic process(GO:2000762)
0.1 7.6 GO:0007267 cell-cell signaling(GO:0007267)
0.1 0.9 GO:0010047 fruit dehiscence(GO:0010047)
0.1 0.8 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.1 0.5 GO:0048205 COPI-coated vesicle budding(GO:0035964) Golgi transport vesicle coating(GO:0048200) COPI coating of Golgi vesicle(GO:0048205)
0.1 1.4 GO:0071051 polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.1 3.9 GO:0010584 pollen exine formation(GO:0010584)
0.1 0.5 GO:0022615 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.1 1.1 GO:0071249 cellular response to nitrate(GO:0071249)
0.1 1.6 GO:0006189 'de novo' IMP biosynthetic process(GO:0006189)
0.1 1.2 GO:0070193 synaptonemal complex assembly(GO:0007130) synaptonemal complex organization(GO:0070193)
0.1 1.5 GO:0008285 negative regulation of cell proliferation(GO:0008285)
0.1 1.1 GO:0010199 organ boundary specification between lateral organs and the meristem(GO:0010199)
0.1 0.7 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.1 1.3 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.1 2.2 GO:0019432 triglyceride biosynthetic process(GO:0019432)
0.1 2.7 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.1 0.8 GO:1990778 protein localization to plasma membrane(GO:0072659) protein localization to cell periphery(GO:1990778)
0.1 2.4 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.1 0.5 GO:0007266 Rho protein signal transduction(GO:0007266)
0.1 3.6 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.1 5.2 GO:0061077 chaperone-mediated protein folding(GO:0061077)
0.1 2.2 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.1 8.1 GO:0045490 pectin catabolic process(GO:0045490)
0.1 1.4 GO:0030488 tRNA methylation(GO:0030488)
0.1 0.6 GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay(GO:0000184)
0.1 5.5 GO:0010101 post-embryonic root morphogenesis(GO:0010101) lateral root morphogenesis(GO:0010102)
0.1 2.0 GO:0006863 purine nucleobase transport(GO:0006863)
0.1 0.8 GO:0010165 response to X-ray(GO:0010165)
0.1 1.6 GO:0006378 mRNA polyadenylation(GO:0006378)
0.1 0.4 GO:0046622 positive regulation of organ growth(GO:0046622)
0.1 0.7 GO:0070919 production of siRNA involved in chromatin silencing by small RNA(GO:0070919)
0.1 2.9 GO:0009559 embryo sac central cell differentiation(GO:0009559)
0.1 1.3 GO:2000652 regulation of secondary cell wall biogenesis(GO:2000652)
0.1 7.4 GO:0006633 fatty acid biosynthetic process(GO:0006633)
0.1 1.5 GO:0006298 mismatch repair(GO:0006298)
0.1 1.0 GO:0010375 stomatal complex patterning(GO:0010375)
0.1 2.0 GO:0009685 gibberellin metabolic process(GO:0009685) gibberellin biosynthetic process(GO:0009686)
0.1 0.7 GO:0006607 NLS-bearing protein import into nucleus(GO:0006607)
0.1 0.8 GO:0009098 leucine biosynthetic process(GO:0009098)
0.1 0.4 GO:0009584 detection of visible light(GO:0009584)
0.1 2.9 GO:0045036 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.1 1.6 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.1 0.5 GO:0009061 anaerobic respiration(GO:0009061)
0.1 5.8 GO:0009664 plant-type cell wall organization(GO:0009664)
0.1 1.2 GO:1900865 chloroplast RNA modification(GO:1900865)
0.1 0.9 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.1 0.4 GO:0033540 fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540)
0.1 1.0 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.1 2.1 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789)
0.1 2.4 GO:0009933 meristem structural organization(GO:0009933)
0.0 5.4 GO:0000160 phosphorelay signal transduction system(GO:0000160)
0.0 1.0 GO:0019853 L-ascorbic acid biosynthetic process(GO:0019853)
0.0 1.9 GO:0045324 late endosome to vacuole transport(GO:0045324)
0.0 0.2 GO:0006361 transcription initiation from RNA polymerase I promoter(GO:0006361)
0.0 0.8 GO:0006538 glutamate catabolic process(GO:0006538)
0.0 1.0 GO:0009904 chloroplast accumulation movement(GO:0009904)
0.0 0.7 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.0 1.8 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.0 1.4 GO:0006284 base-excision repair(GO:0006284)
0.0 1.1 GO:0008360 regulation of cell shape(GO:0008360)
0.0 0.7 GO:0006032 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.0 0.6 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.0 1.3 GO:0080092 regulation of pollen tube growth(GO:0080092)
0.0 0.7 GO:0006535 cysteine biosynthetic process from serine(GO:0006535)
0.0 5.3 GO:0007017 microtubule-based process(GO:0007017)
0.0 0.3 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.0 3.0 GO:0034249 negative regulation of translation(GO:0017148) negative regulation of cellular amide metabolic process(GO:0034249)
0.0 0.2 GO:0015919 peroxisomal membrane transport(GO:0015919)
0.0 0.7 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.0 0.7 GO:0009612 response to mechanical stimulus(GO:0009612)
0.0 0.2 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.0 1.8 GO:0006906 vesicle fusion(GO:0006906)
0.0 0.5 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.0 2.4 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 1.0 GO:0042127 regulation of cell proliferation(GO:0042127)
0.0 1.6 GO:0006400 tRNA modification(GO:0006400)
0.0 0.4 GO:0015749 monosaccharide transport(GO:0015749)
0.0 0.7 GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)(GO:0000462)
0.0 0.6 GO:0046189 phenol-containing compound biosynthetic process(GO:0046189)
0.0 2.9 GO:0009932 cell tip growth(GO:0009932)
0.0 0.9 GO:0010928 regulation of auxin mediated signaling pathway(GO:0010928)
0.0 0.7 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 14.0 GO:0006412 translation(GO:0006412)
0.0 0.3 GO:0009704 de-etiolation(GO:0009704)
0.0 0.5 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.0 0.5 GO:2000012 regulation of auxin polar transport(GO:2000012)
0.0 0.7 GO:0009696 salicylic acid metabolic process(GO:0009696)
0.0 0.7 GO:0006289 nucleotide-excision repair(GO:0006289)
0.0 0.4 GO:2000008 regulation of protein localization to cell surface(GO:2000008)
0.0 0.4 GO:0042593 glucose homeostasis(GO:0042593)
0.0 0.5 GO:0010075 regulation of meristem growth(GO:0010075)
0.0 0.6 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 1.5 GO:0009723 response to ethylene(GO:0009723)
0.0 1.1 GO:0009813 flavonoid biosynthetic process(GO:0009813)
0.0 1.5 GO:0009553 embryo sac development(GO:0009553)
0.0 0.4 GO:0006270 DNA replication initiation(GO:0006270)
0.0 0.8 GO:0031047 gene silencing by RNA(GO:0031047)
0.0 0.2 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.0 0.1 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.0 0.1 GO:0070828 heterochromatin organization(GO:0070828)
0.0 0.0 GO:0046391 5-phosphoribose 1-diphosphate biosynthetic process(GO:0006015) 5-phosphoribose 1-diphosphate metabolic process(GO:0046391)
0.0 0.7 GO:0009135 glycolytic process(GO:0006096) ATP generation from ADP(GO:0006757) purine nucleoside diphosphate metabolic process(GO:0009135) purine ribonucleoside diphosphate metabolic process(GO:0009179) ADP metabolic process(GO:0046031)
0.0 0.5 GO:0006367 transcription initiation from RNA polymerase II promoter(GO:0006367)
0.0 0.0 GO:0006741 NADP biosynthetic process(GO:0006741)
0.0 1.9 GO:0032259 methylation(GO:0032259)
0.0 0.1 GO:0031365 N-terminal protein amino acid modification(GO:0031365)
0.0 0.1 GO:0046471 phosphatidylglycerol biosynthetic process(GO:0006655) phosphatidylglycerol metabolic process(GO:0046471)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.4 6.9 GO:0009897 external side of plasma membrane(GO:0009897)
1.4 10.8 GO:0009533 chloroplast stromal thylakoid(GO:0009533)
0.9 4.6 GO:0033597 mitotic checkpoint complex(GO:0033597)
0.8 6.7 GO:0009538 photosystem I reaction center(GO:0009538)
0.8 3.1 GO:0032133 chromosome passenger complex(GO:0032133)
0.8 3.0 GO:0009330 DNA topoisomerase complex (ATP-hydrolyzing)(GO:0009330)
0.6 3.5 GO:0005828 kinetochore microtubule(GO:0005828)
0.4 2.7 GO:0001405 presequence translocase-associated import motor(GO:0001405)
0.4 10.0 GO:0005871 kinesin complex(GO:0005871)
0.4 1.2 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.4 4.3 GO:0000427 plastid-encoded plastid RNA polymerase complex(GO:0000427)
0.4 4.9 GO:0045298 tubulin complex(GO:0045298)
0.4 3.6 GO:0031209 SCAR complex(GO:0031209)
0.3 3.8 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.3 52.0 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.3 0.9 GO:0032299 ribonuclease H2 complex(GO:0032299)
0.3 0.9 GO:0043186 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.3 1.2 GO:0030130 clathrin coat of trans-Golgi network vesicle(GO:0030130)
0.3 1.0 GO:0032044 DSIF complex(GO:0032044)
0.2 10.2 GO:0010319 stromule(GO:0010319)
0.2 2.0 GO:0005662 DNA replication factor A complex(GO:0005662)
0.2 3.0 GO:0005880 nuclear microtubule(GO:0005880)
0.2 1.4 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.2 1.4 GO:0000808 origin recognition complex(GO:0000808) nuclear origin of replication recognition complex(GO:0005664)
0.2 1.7 GO:0035618 endocytic vesicle(GO:0030139) root hair(GO:0035618)
0.2 2.4 GO:0000124 SAGA complex(GO:0000124)
0.2 8.5 GO:0010287 plastoglobule(GO:0010287)
0.2 0.6 GO:0070652 HAUS complex(GO:0070652)
0.2 8.4 GO:0009706 chloroplast inner membrane(GO:0009706)
0.1 3.6 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.1 1.9 GO:0000815 ESCRT III complex(GO:0000815)
0.1 1.8 GO:0000776 kinetochore(GO:0000776)
0.1 0.5 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.1 0.4 GO:0005846 nuclear cap binding complex(GO:0005846)
0.1 14.2 GO:0022625 cytosolic large ribosomal subunit(GO:0022625)
0.1 5.3 GO:0009524 phragmoplast(GO:0009524)
0.1 8.4 GO:0000138 Golgi trans cisterna(GO:0000138)
0.1 11.3 GO:0031225 anchored component of membrane(GO:0031225)
0.1 1.4 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.1 1.5 GO:0016324 apical plasma membrane(GO:0016324)
0.1 1.0 GO:0048226 Casparian strip(GO:0048226)
0.1 4.8 GO:0090406 pollen tube(GO:0090406)
0.1 1.2 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.1 11.8 GO:0009505 plant-type cell wall(GO:0009505)
0.1 18.2 GO:0048046 apoplast(GO:0048046)
0.1 0.6 GO:0031464 Cul4A-RING E3 ubiquitin ligase complex(GO:0031464)
0.1 20.9 GO:0009534 chloroplast thylakoid(GO:0009534)
0.1 1.1 GO:0042995 cell projection(GO:0042995)
0.1 0.4 GO:0005763 organellar small ribosomal subunit(GO:0000314) mitochondrial small ribosomal subunit(GO:0005763)
0.1 0.6 GO:0032300 mismatch repair complex(GO:0032300)
0.0 2.6 GO:0009707 chloroplast outer membrane(GO:0009707)
0.0 4.8 GO:0022627 cytosolic small ribosomal subunit(GO:0022627)
0.0 2.0 GO:0099503 secretory vesicle(GO:0099503)
0.0 0.3 GO:0035145 exon-exon junction complex(GO:0035145)
0.0 0.7 GO:0031305 integral component of mitochondrial inner membrane(GO:0031305)
0.0 18.0 GO:0009570 chloroplast stroma(GO:0009570)
0.0 4.1 GO:0030312 cell wall(GO:0005618) external encapsulating structure(GO:0030312)
0.0 1.1 GO:0030659 cytoplasmic vesicle membrane(GO:0030659)
0.0 0.6 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 5.9 GO:0005802 trans-Golgi network(GO:0005802)
0.0 0.8 GO:0005770 late endosome(GO:0005770)
0.0 38.2 GO:0005576 extracellular region(GO:0005576)
0.0 0.4 GO:0005761 mitochondrial ribosome(GO:0005761)
0.0 0.3 GO:0005686 U2 snRNP(GO:0005686)
0.0 0.0 GO:0002189 ribose phosphate diphosphokinase complex(GO:0002189)
0.0 0.4 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.6 7.8 GO:0015367 oxoglutarate:malate antiporter activity(GO:0015367)
1.5 4.5 GO:0045430 chalcone isomerase activity(GO:0045430)
1.3 5.1 GO:0046593 mandelonitrile lyase activity(GO:0046593)
1.2 3.5 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
1.1 3.3 GO:0016630 protochlorophyllide reductase activity(GO:0016630)
1.1 5.4 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
1.0 3.0 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.9 4.6 GO:0004614 phosphoglucomutase activity(GO:0004614)
0.8 3.1 GO:0035175 histone serine kinase activity(GO:0035174) histone kinase activity (H3-S10 specific)(GO:0035175)
0.8 10.0 GO:0042389 omega-3 fatty acid desaturase activity(GO:0042389)
0.7 3.0 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.7 14.9 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.7 2.8 GO:0052924 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.7 2.6 GO:0070402 NADPH binding(GO:0070402)
0.6 1.8 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.6 2.3 GO:0070818 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.6 13.3 GO:0102338 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.6 1.7 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.6 14.7 GO:0016168 chlorophyll binding(GO:0016168)
0.5 1.6 GO:0004044 amidophosphoribosyltransferase activity(GO:0004044)
0.5 3.6 GO:0071933 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.5 4.1 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.5 2.0 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.5 2.4 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.5 4.6 GO:1990757 ubiquitin ligase activator activity(GO:1990757)
0.4 14.2 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.4 14.1 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.4 3.8 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.4 8.8 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.4 5.8 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.4 1.2 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.4 1.2 GO:0015185 L-alanine transmembrane transporter activity(GO:0015180) gamma-aminobutyric acid transmembrane transporter activity(GO:0015185) alanine transmembrane transporter activity(GO:0022858)
0.4 1.6 GO:0008934 inositol monophosphate 1-phosphatase activity(GO:0008934) inositol monophosphate phosphatase activity(GO:0052834)
0.4 4.6 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.4 7.3 GO:0005199 structural constituent of cell wall(GO:0005199)
0.4 1.1 GO:0004071 aspartate-ammonia ligase activity(GO:0004071)
0.4 1.4 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.4 2.5 GO:0016681 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.4 1.8 GO:0016768 spermine synthase activity(GO:0016768)
0.3 3.8 GO:0008574 ATP-dependent microtubule motor activity, plus-end-directed(GO:0008574)
0.3 21.1 GO:0003777 microtubule motor activity(GO:0003777)
0.3 2.7 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.3 1.3 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.3 2.0 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.3 2.3 GO:0046030 inositol trisphosphate phosphatase activity(GO:0046030)
0.3 0.9 GO:0043812 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.3 0.9 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.3 1.5 GO:0010313 phytochrome binding(GO:0010313)
0.3 3.9 GO:0046556 alpha-L-arabinofuranosidase activity(GO:0046556)
0.3 1.5 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.3 1.2 GO:0070182 DNA polymerase binding(GO:0070182)
0.3 3.0 GO:0003886 DNA (cytosine-5-)-methyltransferase activity(GO:0003886)
0.3 5.9 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.3 6.4 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.3 3.6 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.3 1.7 GO:0004619 phosphoglycerate mutase activity(GO:0004619)
0.3 3.0 GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505)
0.3 1.6 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.3 6.8 GO:0008810 cellulase activity(GO:0008810)
0.3 2.3 GO:0003955 NAD(P)H dehydrogenase (quinone) activity(GO:0003955)
0.3 1.3 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.3 3.6 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.2 0.7 GO:0004034 aldose 1-epimerase activity(GO:0004034)
0.2 1.9 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.2 1.4 GO:0050105 L-gulonolactone oxidase activity(GO:0050105)
0.2 1.9 GO:0052634 gibberellin 2-beta-dioxygenase activity(GO:0045543) C-19 gibberellin 2-beta-dioxygenase activity(GO:0052634)
0.2 2.7 GO:0000774 adenyl-nucleotide exchange factor activity(GO:0000774)
0.2 0.9 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.2 0.9 GO:0016985 mannan endo-1,4-beta-mannosidase activity(GO:0016985)
0.2 1.7 GO:0008381 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.2 2.2 GO:0043733 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.2 1.4 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.2 0.8 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.2 1.0 GO:0010334 sesquiterpene synthase activity(GO:0010334)
0.2 2.9 GO:0016759 cellulose synthase activity(GO:0016759)
0.2 0.8 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.2 1.8 GO:0004022 alcohol dehydrogenase (NAD) activity(GO:0004022)
0.2 0.9 GO:0000048 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.2 3.1 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.2 2.5 GO:0019210 kinase inhibitor activity(GO:0019210)
0.2 5.2 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.2 0.9 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.2 1.7 GO:0008379 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.2 5.2 GO:0008266 poly(U) RNA binding(GO:0008266)
0.2 1.0 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.2 1.5 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.2 0.6 GO:0047215 indole-3-acetate beta-glucosyltransferase activity(GO:0047215)
0.2 5.4 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.2 0.5 GO:0005094 Rho GDP-dissociation inhibitor activity(GO:0005094)
0.2 3.0 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.2 3.8 GO:0030570 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.2 3.0 GO:0008146 sulfotransferase activity(GO:0008146)
0.1 1.0 GO:0005034 osmosensor activity(GO:0005034)
0.1 10.6 GO:0030599 pectinesterase activity(GO:0030599)
0.1 4.5 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.1 0.9 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.1 5.1 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.1 0.9 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.1 0.6 GO:0005354 galactose transmembrane transporter activity(GO:0005354)
0.1 3.0 GO:0016780 phosphotransferase activity, for other substituted phosphate groups(GO:0016780)
0.1 1.2 GO:0010340 carboxyl-O-methyltransferase activity(GO:0010340)
0.1 1.3 GO:0047429 nucleoside-triphosphate diphosphatase activity(GO:0047429)
0.1 2.4 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.1 3.2 GO:0051087 chaperone binding(GO:0051087)
0.1 12.3 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.1 0.7 GO:0032977 membrane insertase activity(GO:0032977)
0.1 1.3 GO:0004709 MAP kinase kinase kinase activity(GO:0004709)
0.1 1.8 GO:0016844 strictosidine synthase activity(GO:0016844)
0.1 3.7 GO:0030145 manganese ion binding(GO:0030145)
0.1 1.1 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.1 1.5 GO:0030983 mismatched DNA binding(GO:0030983)
0.1 1.0 GO:0005351 sugar:proton symporter activity(GO:0005351) cation:sugar symporter activity(GO:0005402)
0.1 1.2 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 2.0 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.1 0.8 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.1 0.8 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.1 9.6 GO:0009055 electron carrier activity(GO:0009055)
0.1 2.1 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.1 1.4 GO:0003688 DNA replication origin binding(GO:0003688)
0.1 0.7 GO:0008252 nucleotidase activity(GO:0008252)
0.1 0.7 GO:0008061 chitin binding(GO:0008061)
0.1 0.4 GO:0047274 galactinol-sucrose galactosyltransferase activity(GO:0047274)
0.1 0.6 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.1 0.6 GO:0016274 arginine N-methyltransferase activity(GO:0016273) protein-arginine N-methyltransferase activity(GO:0016274)
0.1 1.8 GO:0005179 hormone activity(GO:0005179)
0.1 0.7 GO:0008139 nuclear localization sequence binding(GO:0008139)
0.1 1.8 GO:0050135 NAD(P)+ nucleosidase activity(GO:0050135)
0.1 1.3 GO:0061733 histone acetyltransferase activity(GO:0004402) peptide-lysine-N-acetyltransferase activity(GO:0061733)
0.1 2.4 GO:0003713 transcription coactivator activity(GO:0003713)
0.1 13.7 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.6 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.0 0.3 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.0 2.2 GO:0080044 quercetin 7-O-glucosyltransferase activity(GO:0080044)
0.0 0.8 GO:0070628 proteasome binding(GO:0070628)
0.0 0.6 GO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity(GO:0034485)
0.0 0.7 GO:0004124 cysteine synthase activity(GO:0004124)
0.0 2.5 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 1.4 GO:0019200 carbohydrate kinase activity(GO:0019200)
0.0 0.9 GO:0010333 terpene synthase activity(GO:0010333)
0.0 0.4 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.0 0.5 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.2 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.0 0.4 GO:0000339 RNA cap binding(GO:0000339)
0.0 1.1 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.4 GO:0000155 phosphorelay sensor kinase activity(GO:0000155)
0.0 2.4 GO:0008483 transaminase activity(GO:0008483) transferase activity, transferring nitrogenous groups(GO:0016769)
0.0 0.7 GO:0080031 methyl salicylate esterase activity(GO:0080031) methyl jasmonate esterase activity(GO:0080032)
0.0 0.9 GO:0004565 beta-galactosidase activity(GO:0004565)
0.0 1.9 GO:0051082 unfolded protein binding(GO:0051082)
0.0 0.6 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 0.4 GO:0002161 aminoacyl-tRNA editing activity(GO:0002161)
0.0 0.4 GO:0004430 1-phosphatidylinositol 4-kinase activity(GO:0004430)
0.0 2.2 GO:0008017 microtubule binding(GO:0008017)
0.0 1.3 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.6 GO:0010427 abscisic acid binding(GO:0010427)
0.0 0.7 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.0 0.4 GO:0005504 fatty acid binding(GO:0005504)
0.0 1.1 GO:0070008 serine-type carboxypeptidase activity(GO:0004185) serine-type exopeptidase activity(GO:0070008)
0.0 0.1 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.0 0.9 GO:0004523 RNA-DNA hybrid ribonuclease activity(GO:0004523)
0.0 1.5 GO:0004601 peroxidase activity(GO:0004601)
0.0 0.3 GO:0046961 proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.0 0.2 GO:0000990 transcription factor activity, core RNA polymerase binding(GO:0000990)
0.0 0.0 GO:0004749 ribose phosphate diphosphokinase activity(GO:0004749)
0.0 3.3 GO:0001012 RNA polymerase II regulatory region sequence-specific DNA binding(GO:0000977) RNA polymerase II regulatory region DNA binding(GO:0001012)
0.0 0.1 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.0 0.6 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.3 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.6 1.7 PID AURORA A PATHWAY Aurora A signaling
0.5 2.9 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.2 2.0 PID ATR PATHWAY ATR signaling pathway
0.2 0.6 PID ARF6 DOWNSTREAM PATHWAY Arf6 downstream pathway
0.1 1.0 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.1 0.1 PID REELIN PATHWAY Reelin signaling pathway
0.1 0.6 PID IL8 CXCR2 PATHWAY IL8- and CXCR2-mediated signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 2.0 REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND Genes involved in Removal of the Flap Intermediate from the C-strand
0.2 1.4 REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION Genes involved in E2F-enabled inhibition of pre-replication complex formation
0.2 1.0 REACTOME SLC MEDIATED TRANSMEMBRANE TRANSPORT Genes involved in SLC-mediated transmembrane transport
0.2 0.6 REACTOME SEMAPHORIN INTERACTIONS Genes involved in Semaphorin interactions
0.1 0.6 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation