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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT4G36780

Z-value: 1.17

Transcription factors associated with AT4G36780

Gene Symbol Gene ID Gene Info
AT4G36780 BES1/BZR1 homolog 2

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
BEH2arTal_v1_Chr4_-_17334355_173343550.096.7e-01Click!

Activity profile of AT4G36780 motif

Sorted Z-values of AT4G36780 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_-_21189859 3.73 AT3G57260.1
AT3G57260.2
beta-1,3-glucanase 2
Chr1_+_21207537 3.43 AT1G56600.1
galactinol synthase 2
Chr1_+_11310997 2.97 AT1G31580.1
ECS1
Chr1_+_8542212 2.82 AT1G24147.1
transmembrane protein
Chr5_-_3402389 2.73 AT5G10760.1
Eukaryotic aspartyl protease family protein
Chr2_+_7845923 2.67 AT2G18050.2
AT2G18050.1
histone H1-3
Chr2_-_6493512 2.65 AT2G15020.1
hypothetical protein
Chr1_+_19515143 2.56 AT1G52400.3
AT1G52400.2
beta glucosidase 18
Chr1_+_19514989 2.46 AT1G52400.1
beta glucosidase 18
Chr1_+_1882907 2.43 AT1G06160.1
octadecanoid-responsive AP2/ERF 59
Chr3_-_1286760 2.42 AT3G04720.1
pathogenesis-related 4
Chr2_-_6242541 2.39 AT2G14610.1
pathogenesis-related protein 1
Chr3_+_5243432 2.09 AT3G15510.1
NAC domain containing protein 2
Chr2_-_16690182 2.04 AT2G39980.1
HXXXD-type acyl-transferase family protein
Chr3_-_22907958 2.04 AT3G61880.1
AT3G61880.2
cytochrome p450 78a9
Chr5_-_1459039 1.95 AT5G04950.1
nicotianamine synthase 1
Chr3_-_23355480 1.94 AT3G63210.1
mediator of aba-regulated dormancy protein (DUF581)
Chr1_-_30142697 1.91 AT1G80130.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_-_27171410 1.90 AT1G72200.1
RING/U-box superfamily protein
Chr3_+_19239305 1.89 AT3G51860.1
AT3G51860.2
cation exchanger 3
Chr5_-_21265460 1.87 AT5G52390.1
PAR1 protein
Chr4_+_2445775 1.82 AT4G04830.1
AT4G04830.2
methionine sulfoxide reductase B5
Chr5_+_23928954 1.82 AT5G59320.1
lipid transfer protein 3
Chr3_-_9375671 1.79 AT3G25717.1
ROTUNDIFOLIA like 16
Chr1_+_6450585 1.79 AT1G18710.1
myb domain protein 47
Chr2_+_15528877 1.78 AT2G36970.1
UDP-Glycosyltransferase superfamily protein
Chr3_-_20475332 1.77 AT3G55240.1
Plant protein 1589 of unknown function
Chr1_+_7366775 1.73 AT1G21050.1
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
Chr2_+_17507343 1.71 AT2G41940.1
zinc finger protein 8
Chr1_+_7366590 1.67 AT1G21050.2
MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)
Chr4_-_15903523 1.66 AT4G32940.1
gamma vacuolar processing enzyme
Chr5_-_24083528 1.66 AT5G59780.2
AT5G59780.1
AT5G59780.3
myb domain protein 59
Chr4_-_13998604 1.64 AT4G28240.1
Wound-responsive family protein
Chr1_-_12003005 1.63 AT1G33102.1
hypothetical protein
Chr2_-_12542465 1.62 AT2G29170.1
NAD(P)-binding Rossmann-fold superfamily protein
Chr5_+_17806397 1.61 AT5G44210.1
erf domain protein 9
Chr5_+_7703041 1.60 AT5G23010.2
AT5G23010.1
AT5G23010.3
methylthioalkylmalate synthase 1
Chr2_-_14537556 1.60 AT2G34490.1
cytochrome P450, family 710, subfamily A, polypeptide 2
Chr1_-_13117235 1.59 AT1G35560.1
TCP family transcription factor
Chr2_+_17909007 1.58 AT2G43060.1
ILI1 binding bHLH 1
Chr3_+_11527756 1.56 AT3G29670.1
HXXXD-type acyl-transferase family protein
Chr3_-_9595283 1.55 AT3G26210.1
cytochrome P450, family 71, subfamily B, polypeptide 23
Chr4_+_11150049 1.55 AT4G20820.1
FAD-binding Berberine family protein
Chr4_-_13022996 1.54 AT4G25490.1
C-repeat/DRE binding factor 1
Chr3_+_9406669 1.53 AT3G25770.1
allene oxide cyclase 2
Chr4_-_7992429 1.53 AT4G13770.1
cytochrome P450, family 83, subfamily A, polypeptide 1
Chr1_-_2175038 1.52 AT1G07090.1
LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640)
Chr5_+_1615507 1.51 AT5G05460.1
Glycosyl hydrolase family 85
Chr3_+_22602816 1.51 AT3G61060.1
AT3G61060.2
phloem protein 2-A13
Chr2_-_17712290 1.48 AT2G42540.2
AT2G42540.4
AT2G42540.1
AT2G42540.3
cold-regulated 15a
Chr3_-_2890520 1.47 AT3G09390.2
AT3G09390.1
metallothionein 2A
Chr3_+_10061009 1.47 AT3G27250.1
AT3G27250.2
hypothetical protein
Chr4_+_2441241 1.45 AT4G04810.2
AT4G04810.1
methionine sulfoxide reductase B4
Chr1_+_28458691 1.44 AT1G75800.1
Pathogenesis-related thaumatin superfamily protein
Chr3_+_5341356 1.43 AT3G15780.1
transmembrane protein
Chr1_+_27931836 1.43 AT1G74290.1
alpha/beta-Hydrolases superfamily protein
Chr1_+_4794664 1.42 AT1G13990.1
AT1G13990.2
AT1G13990.3
plant/protein
Chr1_-_29518028 1.38 AT1G78450.1
SOUL heme-binding family protein
Chr1_-_28284036 1.38 AT1G75380.3
AT1G75380.1
AT1G75380.2
AT1G75380.4
bifunctional nuclease in basal defense response 1
Chr3_+_4510965 1.37 AT3G13750.1
beta galactosidase 1
Chr1_-_24502776 1.36 AT1G65860.1
flavin-monooxygenase glucosinolate S-oxygenase 1
Chr1_-_24062804 1.35 AT1G64780.1
ammonium transporter 1;2
Chr1_+_26687202 1.35 AT1G70760.1
inorganic carbon transport protein-like protein
Chr1_-_25446952 1.34 AT1G67865.1
hypothetical protein
Chr1_-_25447622 1.33 AT1G67865.2
hypothetical protein
Chr5_+_4776733 1.33 AT5G14780.1
AT5G14780.3
AT5G14780.2
formate dehydrogenase
Chr1_+_25426234 1.32 AT1G67810.1
sulfur E2
Chr1_+_21017311 1.32 AT1G56150.1
SAUR-like auxin-responsive protein family
Chr1_-_105330 1.31 AT1G01250.1
Integrase-type DNA-binding superfamily protein
Chr4_+_18519599 1.31 AT4G39940.1
APS-kinase 2
Chr1_-_2287730 1.31 AT1G07440.2
AT1G07440.1
NAD(P)-binding Rossmann-fold superfamily protein
Chr4_-_14820595 1.30 AT4G30270.1
xyloglucan endotransglucosylase/hydrolase 24
Chr5_+_26573964 1.30 AT5G66590.1
CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
Chr3_-_10790553 1.30 AT3G28740.1
Cytochrome P450 superfamily protein
Chr2_+_17920647 1.29 AT2G43100.1
isopropylmalate isomerase 2
Chr1_+_27092893 1.29 AT1G71970.1
hypothetical protein
Chr2_-_17403050 1.29 AT2G41710.3
AT2G41710.2
AT2G41710.1
AT2G41710.4
Integrase-type DNA-binding superfamily protein
Chr5_-_6428454 1.28 AT5G19150.2
AT5G19150.1
pfkB-like carbohydrate kinase family protein
Chr5_-_5177897 1.25 AT5G15850.1
CONSTANS-like 1
Chr5_+_17171807 1.25 AT5G42825.1
hypothetical protein
Chr2_-_9454270 1.24 AT2G22240.3
AT2G22240.1
myo-inositol-1-phosphate synthase 2
Chr4_+_11639757 1.24 AT4G21930.1
senescence regulator (Protein of unknown function, DUF584)
Chr5_-_3190321 1.22 AT5G10170.1
myo-inositol-1-phosphate synthase 3
Chr1_+_23159734 1.22 AT1G62560.1
AT1G62560.2
flavin-monooxygenase glucosinolate S-oxygenase 3
Chr4_+_9171280 1.22 AT4G16190.1
Papain family cysteine protease
Chr5_-_22312832 1.22 AT5G54960.1
pyruvate decarboxylase-2
Chr1_-_149806 1.21 AT1G01390.1
AT1G01390.2
UDP-Glycosyltransferase superfamily protein
Chr3_-_7993588 1.21 AT3G22550.1
NAD(P)H-quinone oxidoreductase subunit, putative (DUF581)
Chr5_+_17324909 1.21 AT5G43150.1
elongation factor
Chr3_-_8229619 1.20 AT3G23120.1
receptor like protein 38
Chr2_+_17165191 1.20 AT2G41180.1
VQ motif-containing protein
Chr5_-_8916856 1.20 AT5G25610.1
BURP domain-containing protein
Chr5_+_17798262 1.20 AT5G44190.2
AT5G44190.1
GOLDEN2-like 2
Chr4_+_13890472 1.20 AT4G27900.1
AT4G27900.2
CCT motif family protein
Chr2_-_9454094 1.19 AT2G22240.2
myo-inositol-1-phosphate synthase 2
Chr4_+_7304323 1.19 AT4G12290.2
Copper amine oxidase family protein
Chr5_-_1139631 1.19 AT5G04150.2
AT5G04150.1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_-_5367612 1.19 AT5G16410.1
HXXXD-type acyl-transferase family protein
Chr5_+_22175461 1.19 AT5G54585.1
hypothetical protein
Chr2_+_9259511 1.19 AT2G21650.1
Homeodomain-like superfamily protein
Chr2_+_11364996 1.18 AT2G26695.2
AT2G26695.1
Ran BP2/NZF zinc finger-like superfamily protein
Chr3_+_10023931 1.17 AT3G27170.1
chloride channel B
Chr4_+_7303985 1.17 AT4G12290.1
Copper amine oxidase family protein
Chr5_-_3447278 1.17 AT5G10930.1
CBL-interacting protein kinase 5
Chr2_+_9254378 1.17 AT2G21640.1
marker for oxidative stress response protein
Chr1_+_2238017 1.17 AT1G07280.1
AT1G07280.2
AT1G07280.4
AT1G07280.3
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr4_-_11648644 1.17 AT4G21960.1
Peroxidase superfamily protein
Chr5_-_8181107 1.17 AT5G24155.2
AT5G24155.3
AT5G24155.1
FAD/NAD(P)-binding oxidoreductase family protein
Chr3_+_19086344 1.16 AT3G51430.1
AT3G51430.2
Calcium-dependent phosphotriesterase superfamily protein
Chr3_-_8459990 1.16 AT3G23570.2
AT3G23570.3
alpha/beta-Hydrolases superfamily protein
Chr3_+_4544364 1.16 AT3G13810.5
AT3G13810.3
AT3G13810.4
AT3G13810.6
AT3G13810.2
AT3G13810.1
indeterminate(ID)-domain 11
Chr2_-_852321 1.16 AT2G02930.1
glutathione S-transferase F3
Chr2_+_16556801 1.15 AT2G39705.1
ROTUNDIFOLIA like 8
Chr5_-_20667312 1.15 AT5G50800.1
Nodulin MtN3 family protein
Chr5_+_6127773 1.15 AT5G18470.1
Curculin-like (mannose-binding) lectin family protein
Chr1_+_27669152 1.14 AT1G73600.2
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_+_27670626 1.14 AT1G73600.1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_-_2652535 1.14 AT5G08240.1
transmembrane protein
Chr5_+_19309227 1.14 AT5G47640.1
nuclear factor Y, subunit B2
Chr1_-_19822399 1.13 AT1G53170.1
ethylene response factor 8
Chr3_-_5598027 1.13 AT3G16470.2
AT3G16470.1
Mannose-binding lectin superfamily protein
Chr1_+_11532199 1.12 AT1G32060.1
phosphoribulokinase
Chr1_-_1552587 1.12 AT1G05310.1
Pectin lyase-like superfamily protein
Chr5_-_131687 1.11 AT5G01320.1
Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
Chr5_+_24480291 1.11 AT5G60850.1
OBF binding protein 4
Chr5_+_6673874 1.11 AT5G19740.1
Peptidase M28 family protein
Chr2_+_8855302 1.11 AT2G20570.1
AT2G20570.3
AT2G20570.2
GBF's pro-rich region-interacting factor 1
Chr3_-_8459814 1.10 AT3G23570.1
alpha/beta-Hydrolases superfamily protein
Chr2_+_13107909 1.10 AT2G30766.2
hypothetical protein
Chr5_-_2176446 1.09 AT5G07010.1
sulfotransferase 2A
Chr5_-_7410102 1.08 AT5G22380.1
NAC domain containing protein 90
Chr2_-_15092353 1.08 AT2G35940.3
AT2G35940.1
BEL1-like homeodomain 1
Chr3_-_7063372 1.08 AT3G20250.2
AT3G20250.1
pumilio 5
Chr5_-_17962276 1.08 AT5G44568.1
transmembrane protein
Chr3_+_23266227 1.08 AT3G62950.1
Thioredoxin superfamily protein
Chr4_-_15931332 1.08 AT4G33010.2
AT4G33010.1
glycine decarboxylase P-protein 1
Chr3_+_9887917 1.08 AT3G26830.1
Cytochrome P450 superfamily protein
Chr5_+_19678825 1.07 AT5G48550.2
AT5G48550.1
F-box associated ubiquitination effector family protein
Chr1_+_3288087 1.07 AT1G10070.3
AT1G10070.2
AT1G10070.1
branched-chain amino acid transaminase 2
Chr4_-_11640164 1.06 AT4G21926.1
hypothetical protein
Chr3_-_4591483 1.06 AT3G13910.2
AT3G13910.1
hypothetical protein (DUF3511)
Chr3_-_5599224 1.06 AT3G16470.3
AT3G16470.4
Mannose-binding lectin superfamily protein
Chr2_-_2983602 1.06 AT2G07180.2
AT2G07180.1
Protein kinase superfamily protein
Chr2_-_12685145 1.05 AT2G29670.2
AT2G29670.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr2_-_15092178 1.05 AT2G35940.2
BEL1-like homeodomain 1
Chr2_+_13107583 1.04 AT2G30766.1
hypothetical protein
Chr1_+_29759030 1.04 AT1G79110.2
AT1G79110.3
AT1G79110.1
zinc ion binding protein
Chr5_+_8217191 1.04 AT5G24210.1
AT5G24210.2
AT5G24210.3
alpha/beta-Hydrolases superfamily protein
Chr1_+_2672198 1.04 AT1G08460.1
AT1G08460.2
histone deacetylase 8
Chr5_+_5211719 1.04 AT5G15970.1
stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6)
Chr2_-_6668046 1.04 AT2G15320.1
Leucine-rich repeat (LRR) family protein
Chr1_+_27861116 1.03 AT1G74088.2
AT1G74088.1
galacturonosyltransferase
Chr1_-_8271933 1.03 AT1G23310.2
AT1G23310.1
glutamate:glyoxylate aminotransferase
Chr1_-_26540818 1.02 AT1G70420.1
DNA ligase-like protein, putative (DUF1645)
Chr2_-_19370478 1.02 AT2G47180.1
galactinol synthase 1
Chr1_+_28145978 1.02 AT1G74940.1
cyclin-dependent kinase, putative (DUF581)
Chr1_-_6802652 1.02 AT1G19660.2
AT1G19660.3
AT1G19660.1
Wound-responsive family protein
Chr5_+_2446669 1.01 AT5G07690.1
myb domain protein 29
Chr2_-_10831655 1.01 AT2G25450.1
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Chr2_+_18537177 1.00 AT2G44940.1
Integrase-type DNA-binding superfamily protein
Chr2_+_18789489 1.00 AT2G45600.1
alpha/beta-Hydrolases superfamily protein
Chr2_-_13307572 1.00 AT2G31230.1
ethylene-responsive element binding factor 15
Chr1_-_17076417 0.99 AT1G45145.1
thioredoxin H-type 5
Chr5_+_5168194 0.99 AT5G15830.1
basic leucine-zipper 3
Chr4_+_8218261 0.98 AT4G14270.2
polyadenylate-binding protein interacting protein
Chr1_-_7900335 0.98 AT1G22370.1
AT1G22370.2
UDP-glucosyl transferase 85A5
Chr2_+_15050677 0.98 AT2G35820.1
ureidoglycolate hydrolase
Chr5_+_22038165 0.98 AT5G54270.1
light-harvesting chlorophyll B-binding protein 3
Chr1_-_23137254 0.98 AT1G62510.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr4_-_14619573 0.97 AT4G29900.2
AT4G29900.1
autoinhibited Ca(2+)-ATPase 10
Chr4_+_8218083 0.97 AT4G14270.1
polyadenylate-binding protein interacting protein
Chr3_+_10524181 0.97 AT3G28220.1
TRAF-like family protein
Chr5_+_7168106 0.97 AT5G21100.1
Plant L-ascorbate oxidase
Chr2_+_15050498 0.97 AT2G35820.2
ureidoglycolate hydrolase
Chr1_+_24647121 0.97 AT1G66180.1
Eukaryotic aspartyl protease family protein
Chr1_-_25451051 0.96 AT1G67870.1
glycine-rich protein
Chr4_+_8360996 0.96 AT4G14560.1
indole-3-acetic acid inducible
Chr4_-_18573084 0.96 AT4G40060.1
homeobox protein 16
Chr2_-_7919345 0.96 AT2G18193.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr1_+_6027487 0.96 AT1G17530.1
AT1G17530.2
translocase of inner mitochondrial membrane 23
Chr3_-_9712659 0.96 AT3G26510.3
AT3G26510.7
AT3G26510.2
Octicosapeptide/Phox/Bem1p family protein
Chr5_-_21651626 0.96 AT5G53370.1
AT5G53370.2
pectin methylesterase PCR fragment F
Chr1_+_7337605 0.96 AT1G21000.1
PLATZ transcription factor family protein
Chr1_-_17906873 0.95 AT1G48430.2
AT1G48430.1
Dihydroxyacetone kinase
Chr2_-_14200674 0.95 AT2G33530.1
serine carboxypeptidase-like 46
Chr3_-_9712826 0.95 AT3G26510.5
AT3G26510.4
AT3G26510.1
AT3G26510.6
Octicosapeptide/Phox/Bem1p family protein
Chr1_+_19434480 0.95 AT1G52190.1
Major facilitator superfamily protein
Chr5_-_1624270 0.94 AT5G05480.1
Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein
Chr3_-_16735951 0.94 AT3G45600.1
AT3G45600.2
tetraspanin3
Chr1_+_18138169 0.94 AT1G49032.2
hypothetical protein
Chr4_-_8095749 0.94 AT4G14020.1
Rapid alkalinization factor (RALF) family protein
Chr5_-_19172956 0.94 AT5G47220.1
ethylene responsive element binding factor 2
Chr1_+_22198266 0.93 AT1G60190.1
ARM repeat superfamily protein
Chr5_+_5206156 0.93 AT5G15950.2
Adenosylmethionine decarboxylase family protein
Chr2_+_16666023 0.93 AT2G39930.3
AT2G39930.2
isoamylase 1
Chr3_+_21238223 0.93 AT3G57400.1
transmembrane protein
Chr3_-_18946621 0.93 AT3G51000.1
alpha/beta-Hydrolases superfamily protein
Chr3_-_21008064 0.92 AT3G56710.1
AT3G56710.2
sigma factor binding protein 1
Chr1_+_8709941 0.92 AT1G24580.1
RING/U-box superfamily protein
Chr1_+_21136835 0.92 AT1G56430.1
nicotianamine synthase 4

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G36780

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.9 2.7 GO:0033321 homomethionine metabolic process(GO:0033321) glucosinolate biosynthetic process from homomethionine(GO:0033506)
0.8 2.4 GO:0010266 response to vitamin B1(GO:0010266)
0.7 2.9 GO:0072351 nicotianamine metabolic process(GO:0030417) nicotianamine biosynthetic process(GO:0030418) tricarboxylic acid biosynthetic process(GO:0072351)
0.6 5.2 GO:0009819 drought recovery(GO:0009819)
0.6 4.0 GO:0006021 inositol biosynthetic process(GO:0006021)
0.5 2.1 GO:0010351 lithium ion transport(GO:0010351)
0.4 4.7 GO:0009610 response to symbiotic fungus(GO:0009610)
0.4 2.1 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.4 1.7 GO:0035865 cellular response to potassium ion(GO:0035865)
0.4 1.6 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.4 0.4 GO:1901881 positive regulation of protein depolymerization(GO:1901881)
0.4 0.4 GO:0043605 cellular amide catabolic process(GO:0043605)
0.4 1.8 GO:0006106 fumarate metabolic process(GO:0006106)
0.4 1.8 GO:0006517 protein deglycosylation(GO:0006517)
0.3 4.7 GO:0030104 water homeostasis(GO:0030104)
0.3 1.0 GO:0009769 photosynthesis, light harvesting in photosystem II(GO:0009769)
0.3 1.0 GO:0050687 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.3 3.5 GO:2000896 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.3 0.9 GO:0032490 detection of molecule of bacterial origin(GO:0032490)
0.3 4.2 GO:0009098 leucine biosynthetic process(GO:0009098)
0.3 1.1 GO:0000023 maltose metabolic process(GO:0000023)
0.3 0.8 GO:0033528 S-methylmethionine metabolic process(GO:0033477) S-methylmethionine cycle(GO:0033528)
0.3 1.7 GO:0006624 vacuolar protein processing(GO:0006624)
0.3 2.7 GO:0016584 nucleosome positioning(GO:0016584)
0.3 0.8 GO:0010395 rhamnogalacturonan I metabolic process(GO:0010395)
0.3 0.8 GO:0080058 protein deglutathionylation(GO:0080058)
0.3 1.0 GO:0006481 C-terminal protein methylation(GO:0006481)
0.3 1.5 GO:0042754 negative regulation of circadian rhythm(GO:0042754)
0.2 2.4 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.2 0.7 GO:0051090 regulation of sequence-specific DNA binding transcription factor activity(GO:0051090)
0.2 0.7 GO:1990532 stress response to nickel ion(GO:1990532)
0.2 1.4 GO:0055129 L-proline biosynthetic process(GO:0055129)
0.2 2.1 GO:0070814 hydrogen sulfide biosynthetic process(GO:0070814)
0.2 0.7 GO:0010541 acropetal auxin transport(GO:0010541)
0.2 1.3 GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly(GO:0010258)
0.2 1.3 GO:0009759 indole glucosinolate biosynthetic process(GO:0009759)
0.2 3.9 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.2 2.9 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.2 3.1 GO:0010161 red light signaling pathway(GO:0010161)
0.2 0.4 GO:0010376 stomatal complex formation(GO:0010376)
0.2 1.0 GO:1903960 negative regulation of anion channel activity(GO:0010360) regulation of anion channel activity by blue light(GO:0010361) negative regulation of anion channel activity by blue light(GO:0010362) negative regulation of transporter activity(GO:0032410) negative regulation of ion transmembrane transporter activity(GO:0032413) negative regulation of transmembrane transport(GO:0034763) negative regulation of ion transmembrane transport(GO:0034766) negative regulation of anion transport(GO:1903792) negative regulation of anion transmembrane transport(GO:1903960)
0.2 0.2 GO:0046349 UDP-N-acetylglucosamine metabolic process(GO:0006047) amino sugar biosynthetic process(GO:0046349)
0.2 5.1 GO:0030091 protein repair(GO:0030091)
0.2 0.4 GO:0048832 specification of organ number(GO:0048832) specification of floral organ number(GO:0048833)
0.2 0.2 GO:0009245 lipid A biosynthetic process(GO:0009245) lipid A metabolic process(GO:0046493) lipooligosaccharide metabolic process(GO:1901269) lipooligosaccharide biosynthetic process(GO:1901271)
0.2 1.9 GO:0048363 mucilage pectin metabolic process(GO:0048363)
0.2 1.0 GO:0010450 inflorescence meristem growth(GO:0010450)
0.2 2.7 GO:0010274 hydrotropism(GO:0010274)
0.2 0.6 GO:0000349 generation of catalytic spliceosome for first transesterification step(GO:0000349)
0.2 0.7 GO:0019336 phenol-containing compound catabolic process(GO:0019336)
0.2 0.5 GO:0050996 positive regulation of fatty acid beta-oxidation(GO:0032000) positive regulation of lipid catabolic process(GO:0050996)
0.2 1.2 GO:0006751 glutathione catabolic process(GO:0006751)
0.2 2.1 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.2 0.9 GO:0009590 detection of gravity(GO:0009590)
0.2 0.9 GO:0048281 inflorescence morphogenesis(GO:0048281)
0.2 0.5 GO:0042353 fucose biosynthetic process(GO:0042353)
0.2 0.7 GO:0006741 NADP biosynthetic process(GO:0006741)
0.2 0.2 GO:0080001 mucilage extrusion from seed coat(GO:0080001)
0.2 3.0 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.2 0.8 GO:0071786 endoplasmic reticulum tubular network organization(GO:0071786)
0.2 1.5 GO:1903959 regulation of anion transmembrane transport(GO:1903959)
0.2 2.1 GO:0048317 seed morphogenesis(GO:0048317)
0.2 0.8 GO:0071260 cellular response to mechanical stimulus(GO:0071260)
0.2 0.6 GO:1901568 icosanoid metabolic process(GO:0006690) fatty acid derivative metabolic process(GO:1901568)
0.2 0.5 GO:0010447 response to acidic pH(GO:0010447)
0.2 0.8 GO:1900370 positive regulation of RNA interference(GO:1900370)
0.2 1.1 GO:0019464 glycine decarboxylation via glycine cleavage system(GO:0019464)
0.2 0.6 GO:2000692 negative regulation of seed maturation(GO:2000692)
0.2 0.5 GO:1901537 positive regulation of DNA demethylation(GO:1901537)
0.2 4.7 GO:0006012 galactose metabolic process(GO:0006012)
0.1 2.5 GO:0080027 response to herbivore(GO:0080027)
0.1 1.1 GO:0010188 response to microbial phytotoxin(GO:0010188)
0.1 0.4 GO:1900459 positive regulation of brassinosteroid mediated signaling pathway(GO:1900459)
0.1 2.1 GO:0006857 oligopeptide transport(GO:0006857) peptide transport(GO:0015833)
0.1 0.6 GO:0015669 gas transport(GO:0015669)
0.1 0.4 GO:0046203 spermidine catabolic process(GO:0046203)
0.1 0.4 GO:2000058 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.1 0.7 GO:0010135 ureide metabolic process(GO:0010135) ureide catabolic process(GO:0010136)
0.1 0.7 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.1 0.7 GO:0042549 photosystem II stabilization(GO:0042549)
0.1 1.5 GO:0006878 cellular copper ion homeostasis(GO:0006878)
0.1 1.2 GO:0060866 leaf abscission(GO:0060866)
0.1 1.5 GO:0006734 NADH metabolic process(GO:0006734)
0.1 0.4 GO:0033194 response to hydroperoxide(GO:0033194)
0.1 0.4 GO:0010507 negative regulation of autophagy(GO:0010507)
0.1 0.5 GO:0006805 xenobiotic metabolic process(GO:0006805) xenobiotic catabolic process(GO:0042178) cellular response to xenobiotic stimulus(GO:0071466)
0.1 0.6 GO:1902025 nitrate import(GO:1902025)
0.1 2.6 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.1 1.2 GO:0000103 sulfate assimilation(GO:0000103)
0.1 2.4 GO:0009861 jasmonic acid and ethylene-dependent systemic resistance(GO:0009861)
0.1 1.2 GO:0015977 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.1 0.7 GO:0051775 response to redox state(GO:0051775)
0.1 0.7 GO:0009745 sucrose mediated signaling(GO:0009745)
0.1 0.5 GO:0046741 transport of virus in host, tissue to tissue(GO:0046741)
0.1 0.7 GO:0009726 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.1 0.5 GO:0006501 C-terminal protein lipidation(GO:0006501)
0.1 1.4 GO:0080144 amino acid homeostasis(GO:0080144)
0.1 0.5 GO:0007569 cell aging(GO:0007569) regulation of cell aging(GO:0090342)
0.1 0.7 GO:0019563 alditol catabolic process(GO:0019405) glycerol catabolic process(GO:0019563)
0.1 3.2 GO:0019761 S-glycoside biosynthetic process(GO:0016144) glycosinolate biosynthetic process(GO:0019758) glucosinolate biosynthetic process(GO:0019761)
0.1 0.3 GO:0009660 amyloplast organization(GO:0009660)
0.1 0.5 GO:0034051 negative regulation of plant-type hypersensitive response(GO:0034051)
0.1 0.3 GO:0051639 actin filament network formation(GO:0051639)
0.1 1.9 GO:0010229 inflorescence development(GO:0010229)
0.1 0.5 GO:0019419 sulfate reduction(GO:0019419)
0.1 1.5 GO:0009299 mRNA transcription(GO:0009299)
0.1 0.4 GO:0051457 maintenance of protein location in nucleus(GO:0051457)
0.1 0.5 GO:0005980 glycogen catabolic process(GO:0005980)
0.1 0.8 GO:1905156 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155) negative regulation of photosynthesis(GO:1905156)
0.1 0.9 GO:0047484 regulation of response to osmotic stress(GO:0047484)
0.1 0.9 GO:0006086 acetyl-CoA biosynthetic process from pyruvate(GO:0006086)
0.1 0.4 GO:0070676 intralumenal vesicle formation(GO:0070676)
0.1 0.6 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.1 0.8 GO:0008535 respiratory chain complex IV assembly(GO:0008535) mitochondrial respiratory chain complex IV assembly(GO:0033617) mitochondrial respiratory chain complex IV biogenesis(GO:0097034)
0.1 1.0 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.1 0.8 GO:0044375 regulation of peroxisome size(GO:0044375)
0.1 1.1 GO:0045723 positive regulation of fatty acid biosynthetic process(GO:0045723)
0.1 0.5 GO:0019745 pentacyclic triterpenoid metabolic process(GO:0019742) pentacyclic triterpenoid biosynthetic process(GO:0019745)
0.1 0.4 GO:0006571 tyrosine biosynthetic process(GO:0006571)
0.1 0.7 GO:2000306 positive regulation of photomorphogenesis(GO:2000306)
0.1 0.3 GO:0090322 regulation of superoxide metabolic process(GO:0090322)
0.1 0.7 GO:0009438 lactate metabolic process(GO:0006089) methylglyoxal metabolic process(GO:0009438) methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) ketone catabolic process(GO:0042182) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727)
0.1 0.9 GO:0042344 indole glucosinolate catabolic process(GO:0042344)
0.1 0.4 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.1 0.9 GO:0030308 negative regulation of cell growth(GO:0030308)
0.1 0.3 GO:0009915 phloem sucrose loading(GO:0009915)
0.1 0.4 GO:0006361 transcription initiation from RNA polymerase I promoter(GO:0006361)
0.1 0.3 GO:0017196 N-terminal protein amino acid acetylation(GO:0006474) N-terminal peptidyl-methionine acetylation(GO:0017196)
0.1 1.0 GO:0046337 phosphatidylethanolamine biosynthetic process(GO:0006646) phosphatidylethanolamine metabolic process(GO:0046337)
0.1 0.4 GO:0006651 diacylglycerol biosynthetic process(GO:0006651)
0.1 0.6 GO:0048578 positive regulation of long-day photoperiodism, flowering(GO:0048578)
0.1 0.5 GO:0046865 isoprenoid transport(GO:0046864) terpenoid transport(GO:0046865)
0.1 1.7 GO:0009269 response to desiccation(GO:0009269)
0.1 0.6 GO:0007188 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.1 0.8 GO:0052548 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.1 0.3 GO:0010731 protein glutathionylation(GO:0010731)
0.1 0.5 GO:0060359 response to ammonium ion(GO:0060359)
0.1 0.7 GO:0046685 response to arsenic-containing substance(GO:0046685)
0.1 1.5 GO:0006074 (1->3)-beta-D-glucan metabolic process(GO:0006074) (1->3)-beta-D-glucan biosynthetic process(GO:0006075)
0.1 2.4 GO:0016575 histone deacetylation(GO:0016575)
0.1 0.5 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.1 3.1 GO:0016126 sterol biosynthetic process(GO:0016126)
0.1 0.9 GO:0048280 vesicle fusion with Golgi apparatus(GO:0048280)
0.1 0.2 GO:0071219 cellular response to molecule of bacterial origin(GO:0071219)
0.1 0.4 GO:0019310 inositol catabolic process(GO:0019310)
0.1 0.8 GO:0016123 xanthophyll biosynthetic process(GO:0016123)
0.1 1.1 GO:1901371 regulation of leaf morphogenesis(GO:1901371)
0.1 0.2 GO:0080171 lytic vacuole organization(GO:0080171)
0.1 0.4 GO:0033591 response to vitamin(GO:0033273) response to L-ascorbic acid(GO:0033591)
0.1 0.4 GO:0010306 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.1 0.3 GO:0045046 protein import into peroxisome membrane(GO:0045046)
0.1 0.4 GO:0080024 indolebutyric acid metabolic process(GO:0080024) response to indolebutyric acid(GO:0080026)
0.1 0.2 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.1 0.2 GO:0055064 chloride ion homeostasis(GO:0055064)
0.1 0.3 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.1 1.4 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.1 0.2 GO:0009107 lipoate biosynthetic process(GO:0009107)
0.1 0.1 GO:0043970 histone H3-K9 acetylation(GO:0043970)
0.1 0.2 GO:0010213 non-photoreactive DNA repair(GO:0010213)
0.1 0.4 GO:0060919 auxin influx(GO:0060919)
0.1 0.6 GO:0080190 lateral growth(GO:0080190)
0.1 0.4 GO:0031116 positive regulation of microtubule polymerization or depolymerization(GO:0031112) positive regulation of microtubule polymerization(GO:0031116)
0.1 0.8 GO:0070298 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.1 0.3 GO:0043481 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.1 1.2 GO:0009773 photosynthetic electron transport in photosystem I(GO:0009773)
0.1 1.1 GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway(GO:0032511)
0.1 0.3 GO:0048530 fruit morphogenesis(GO:0048530)
0.1 0.6 GO:0010023 proanthocyanidin biosynthetic process(GO:0010023)
0.1 1.6 GO:0009944 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.1 0.2 GO:0060860 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.1 3.8 GO:0009873 ethylene-activated signaling pathway(GO:0009873)
0.1 0.2 GO:0010028 xanthophyll cycle(GO:0010028)
0.1 0.3 GO:1902418 (+)-abscisic acid D-glucopyranosyl ester transmembrane transport(GO:1902418)
0.1 0.5 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.1 0.3 GO:0001682 tRNA 5'-leader removal(GO:0001682)
0.1 0.4 GO:0019632 shikimate metabolic process(GO:0019632)
0.1 0.2 GO:0071216 cellular response to biotic stimulus(GO:0071216)
0.1 0.6 GO:0010315 auxin efflux(GO:0010315)
0.1 0.4 GO:0046085 adenosine metabolic process(GO:0046085)
0.1 1.8 GO:0042026 protein refolding(GO:0042026)
0.1 0.2 GO:0071836 nectar secretion(GO:0071836)
0.1 0.2 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.1 0.9 GO:0010207 photosystem II assembly(GO:0010207)
0.1 0.3 GO:1901332 negative regulation of lateral root development(GO:1901332)
0.1 0.9 GO:0050779 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.1 0.3 GO:0045824 negative regulation of innate immune response(GO:0045824)
0.1 0.3 GO:0051098 regulation of binding(GO:0051098)
0.1 1.3 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.1 0.8 GO:1990069 stomatal opening(GO:1990069)
0.1 1.2 GO:0006863 purine nucleobase transport(GO:0006863)
0.1 0.2 GO:0072337 modified amino acid transport(GO:0072337)
0.1 0.6 GO:0010540 basipetal auxin transport(GO:0010540)
0.1 0.2 GO:0042724 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.1 0.4 GO:0006542 glutamine biosynthetic process(GO:0006542)
0.1 0.1 GO:0080140 regulation of jasmonic acid metabolic process(GO:0080140) regulation of jasmonic acid biosynthetic process(GO:0080141)
0.1 0.6 GO:0051553 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.1 0.2 GO:0046499 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.1 1.0 GO:0043649 dicarboxylic acid catabolic process(GO:0043649)
0.1 0.9 GO:0009938 negative regulation of gibberellic acid mediated signaling pathway(GO:0009938)
0.1 0.1 GO:0016574 histone ubiquitination(GO:0016574)
0.0 0.9 GO:0048015 phosphatidylinositol-mediated signaling(GO:0048015)
0.0 0.2 GO:0006828 manganese ion transport(GO:0006828)
0.0 0.2 GO:0010019 chloroplast-nucleus signaling pathway(GO:0010019)
0.0 0.1 GO:0033258 plastid DNA metabolic process(GO:0033258) plastid DNA replication(GO:0033259)
0.0 0.6 GO:0010600 regulation of auxin biosynthetic process(GO:0010600)
0.0 0.6 GO:0032544 plastid translation(GO:0032544)
0.0 0.6 GO:2000142 regulation of DNA-templated transcription, initiation(GO:2000142)
0.0 0.6 GO:0071712 ER-associated misfolded protein catabolic process(GO:0071712)
0.0 0.3 GO:0046900 tetrahydrofolylpolyglutamate metabolic process(GO:0046900)
0.0 0.1 GO:0031538 negative regulation of anthocyanin metabolic process(GO:0031538)
0.0 0.5 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.4 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.0 0.1 GO:0017145 stem cell division(GO:0017145)
0.0 0.8 GO:0052249 virus induced gene silencing(GO:0009616) modulation by symbiont of RNA levels in host(GO:0052018) modulation of RNA levels in other organism involved in symbiotic interaction(GO:0052249)
0.0 0.5 GO:0009554 megasporogenesis(GO:0009554)
0.0 0.4 GO:0015691 cadmium ion transport(GO:0015691)
0.0 0.7 GO:0045324 late endosome to vacuole transport(GO:0045324)
0.0 0.1 GO:0071494 cellular response to UV-C(GO:0071494)
0.0 0.1 GO:0043171 peptide catabolic process(GO:0043171)
0.0 0.6 GO:0045926 negative regulation of growth(GO:0045926)
0.0 1.1 GO:0030150 protein import into mitochondrial matrix(GO:0030150)
0.0 1.6 GO:0006635 fatty acid beta-oxidation(GO:0006635)
0.0 0.5 GO:0032366 intracellular sterol transport(GO:0032366)
0.0 0.1 GO:0006059 hexitol metabolic process(GO:0006059) hexitol biosynthetic process(GO:0019406) mannitol biosynthetic process(GO:0019593) mannitol metabolic process(GO:0019594)
0.0 0.3 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.0 0.4 GO:0010262 somatic embryogenesis(GO:0010262)
0.0 0.4 GO:0009094 L-phenylalanine biosynthetic process(GO:0009094) aromatic amino acid family biosynthetic process, prephenate pathway(GO:0009095) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 1.0 GO:0048574 long-day photoperiodism, flowering(GO:0048574)
0.0 1.6 GO:0010017 red or far-red light signaling pathway(GO:0010017)
0.0 0.4 GO:2001289 lipid X metabolic process(GO:2001289)
0.0 0.1 GO:0034067 protein localization to Golgi apparatus(GO:0034067)
0.0 2.7 GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146)
0.0 2.2 GO:0006972 hyperosmotic response(GO:0006972)
0.0 0.2 GO:0010500 transmitting tissue development(GO:0010500)
0.0 0.2 GO:1902751 positive regulation of G2/M transition of mitotic cell cycle(GO:0010971) positive regulation of cell cycle G2/M phase transition(GO:1902751)
0.0 0.4 GO:0010044 response to aluminum ion(GO:0010044)
0.0 0.2 GO:0015785 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.0 1.0 GO:0010268 brassinosteroid homeostasis(GO:0010268)
0.0 0.0 GO:0048479 style development(GO:0048479)
0.0 0.2 GO:0010071 root meristem specification(GO:0010071)
0.0 0.3 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.0 0.1 GO:0031929 TOR signaling(GO:0031929)
0.0 0.5 GO:0018401 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 2.2 GO:0045454 cell redox homeostasis(GO:0045454)
0.0 0.3 GO:0006488 dolichol-linked oligosaccharide biosynthetic process(GO:0006488)
0.0 0.4 GO:0006188 IMP biosynthetic process(GO:0006188) IMP metabolic process(GO:0046040)
0.0 0.2 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.0 0.4 GO:0008285 negative regulation of cell proliferation(GO:0008285)
0.0 0.2 GO:0010569 regulation of double-strand break repair via homologous recombination(GO:0010569)
0.0 1.6 GO:0006897 endocytosis(GO:0006897)
0.0 1.4 GO:0090487 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.0 1.8 GO:0009615 response to virus(GO:0009615)
0.0 0.8 GO:0070816 phosphorylation of RNA polymerase II C-terminal domain(GO:0070816)
0.0 0.4 GO:0052546 cell wall pectin metabolic process(GO:0052546)
0.0 0.3 GO:0048829 root cap development(GO:0048829)
0.0 0.1 GO:0010480 microsporocyte differentiation(GO:0010480)
0.0 0.5 GO:0006465 signal peptide processing(GO:0006465)
0.0 0.1 GO:0001672 regulation of chromatin assembly or disassembly(GO:0001672)
0.0 0.4 GO:1900055 regulation of leaf senescence(GO:1900055)
0.0 0.3 GO:0010506 regulation of autophagy(GO:0010506)
0.0 0.3 GO:0046688 response to copper ion(GO:0046688)
0.0 1.0 GO:0009226 nucleotide-sugar biosynthetic process(GO:0009226)
0.0 1.0 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.0 0.9 GO:0006284 base-excision repair(GO:0006284)
0.0 0.1 GO:0071481 cellular response to X-ray(GO:0071481)
0.0 0.3 GO:0070973 protein localization to endoplasmic reticulum exit site(GO:0070973)
0.0 0.2 GO:0051346 negative regulation of hydrolase activity(GO:0051346)
0.0 0.2 GO:0006513 protein monoubiquitination(GO:0006513)
0.0 0.1 GO:0019720 Mo-molybdopterin cofactor biosynthetic process(GO:0006777) Mo-molybdopterin cofactor metabolic process(GO:0019720) molybdopterin cofactor biosynthetic process(GO:0032324) molybdopterin cofactor metabolic process(GO:0043545) prosthetic group metabolic process(GO:0051189)
0.0 0.5 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.0 0.7 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.4 GO:0055083 monovalent inorganic anion homeostasis(GO:0055083)
0.0 0.3 GO:0005983 starch catabolic process(GO:0005983)
0.0 0.6 GO:1900150 regulation of defense response to fungus(GO:1900150)
0.0 0.5 GO:0010193 response to ozone(GO:0010193)
0.0 1.7 GO:0009734 auxin-activated signaling pathway(GO:0009734)
0.0 0.7 GO:0031163 iron-sulfur cluster assembly(GO:0016226) metallo-sulfur cluster assembly(GO:0031163)
0.0 0.1 GO:0045905 positive regulation of protein complex disassembly(GO:0043243) positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.0 0.1 GO:0015868 ADP transport(GO:0015866) ATP transport(GO:0015867) purine ribonucleotide transport(GO:0015868) AMP transport(GO:0080121)
0.0 0.1 GO:0016598 protein arginylation(GO:0016598)
0.0 1.9 GO:0009741 response to brassinosteroid(GO:0009741)
0.0 0.5 GO:0007030 Golgi organization(GO:0007030)
0.0 0.2 GO:0071248 cellular response to metal ion(GO:0071248)
0.0 0.1 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.0 0.1 GO:0010148 transpiration(GO:0010148) hexose catabolic process(GO:0019320)
0.0 0.2 GO:0048209 regulation of vesicle targeting, to, from or within Golgi(GO:0048209)
0.0 0.3 GO:0008361 regulation of cell size(GO:0008361)
0.0 0.7 GO:0042752 regulation of circadian rhythm(GO:0042752)
0.0 0.3 GO:0006890 retrograde vesicle-mediated transport, Golgi to ER(GO:0006890)
0.0 0.4 GO:0007186 G-protein coupled receptor signaling pathway(GO:0007186)
0.0 0.0 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.0 0.1 GO:0009154 purine ribonucleotide catabolic process(GO:0009154) ribonucleotide catabolic process(GO:0009261) coenzyme A catabolic process(GO:0015938) nucleoside bisphosphate catabolic process(GO:0033869) ribonucleoside bisphosphate catabolic process(GO:0034031) purine nucleoside bisphosphate catabolic process(GO:0034034)
0.0 0.1 GO:0072659 protein localization to plasma membrane(GO:0072659)
0.0 0.1 GO:0034765 regulation of ion transmembrane transport(GO:0034765)
0.0 0.1 GO:0052192 movement in host(GO:0044000) transport of virus in multicellular host(GO:0046739) transport of virus(GO:0046794) movement in other organism involved in symbiotic interaction(GO:0051814) movement in host environment(GO:0052126) movement in environment of other organism involved in symbiotic interaction(GO:0052192)
0.0 0.8 GO:0019684 photosynthesis, light reaction(GO:0019684)
0.0 1.8 GO:0000209 protein polyubiquitination(GO:0000209)
0.0 0.2 GO:0000266 mitochondrial fission(GO:0000266)
0.0 0.9 GO:0048278 vesicle docking(GO:0048278)
0.0 0.2 GO:0000165 MAPK cascade(GO:0000165)
0.0 0.2 GO:0005986 sucrose biosynthetic process(GO:0005986)
0.0 0.1 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.4 GO:0071472 cellular response to salt stress(GO:0071472)
0.0 0.1 GO:0071108 protein K48-linked deubiquitination(GO:0071108)
0.0 0.3 GO:0000162 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.0 0.2 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.0 0.5 GO:0046856 phospholipid dephosphorylation(GO:0046839) phosphatidylinositol dephosphorylation(GO:0046856)
0.0 0.2 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.0 0.1 GO:0043981 histone H4-K5 acetylation(GO:0043981)
0.0 0.7 GO:0009631 cold acclimation(GO:0009631)
0.0 0.6 GO:0009863 salicylic acid mediated signaling pathway(GO:0009863)
0.0 0.1 GO:0098719 sodium ion transmembrane transport(GO:0035725) sodium ion import(GO:0097369) inorganic cation import into cell(GO:0098659) sodium ion import across plasma membrane(GO:0098719) inorganic ion import into cell(GO:0099587) sodium ion import into cell(GO:1990118)
0.0 0.7 GO:0008283 cell proliferation(GO:0008283)
0.0 0.5 GO:0061077 chaperone-mediated protein folding(GO:0061077)
0.0 0.2 GO:0006896 Golgi to vacuole transport(GO:0006896)
0.0 0.0 GO:0006296 nucleotide-excision repair, DNA incision, 5'-to lesion(GO:0006296)
0.0 0.1 GO:0010587 miRNA metabolic process(GO:0010586) miRNA catabolic process(GO:0010587)
0.0 0.0 GO:0015755 hexose transport(GO:0008645) fructose transport(GO:0015755) vacuolar transmembrane transport(GO:0034486)
0.0 0.1 GO:0033512 lysine catabolic process(GO:0006554) L-lysine catabolic process to acetyl-CoA(GO:0019474) L-lysine catabolic process(GO:0019477) L-lysine catabolic process to acetyl-CoA via saccharopine(GO:0033512) L-lysine metabolic process(GO:0046440)
0.0 0.1 GO:1901006 ubiquinone-6 metabolic process(GO:1901004) ubiquinone-6 biosynthetic process(GO:1901006)
0.0 0.1 GO:0015969 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.0 0.1 GO:0000012 single strand break repair(GO:0000012)
0.0 0.2 GO:0032981 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 0.1 GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic(GO:0034414)
0.0 0.1 GO:0010337 regulation of salicylic acid metabolic process(GO:0010337)
0.0 0.2 GO:0006888 ER to Golgi vesicle-mediated transport(GO:0006888)
0.0 0.2 GO:0090332 stomatal closure(GO:0090332)
0.0 0.0 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.0 0.3 GO:0031124 mRNA 3'-end processing(GO:0031124)
0.0 0.1 GO:0035336 long-chain fatty-acyl-CoA metabolic process(GO:0035336)
0.0 0.7 GO:0006400 tRNA modification(GO:0006400)
0.0 0.1 GO:0034219 carbohydrate transmembrane transport(GO:0034219)
0.0 0.4 GO:0006367 transcription initiation from RNA polymerase II promoter(GO:0006367)
0.0 0.0 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.0 0.3 GO:0006506 GPI anchor metabolic process(GO:0006505) GPI anchor biosynthetic process(GO:0006506)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 5.0 GO:0010168 ER body(GO:0010168)
0.2 1.6 GO:0000153 cytoplasmic ubiquitin ligase complex(GO:0000153)
0.2 1.1 GO:0005960 glycine cleavage complex(GO:0005960)
0.2 0.8 GO:0005967 mitochondrial pyruvate dehydrogenase complex(GO:0005967)
0.2 2.2 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.2 7.3 GO:0010319 stromule(GO:0010319)
0.2 2.6 GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)(GO:0010598)
0.2 0.5 GO:0034274 Atg12-Atg5-Atg16 complex(GO:0034274)
0.1 2.8 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.1 1.3 GO:0030076 thylakoid light-harvesting complex(GO:0009503) PSII associated light-harvesting complex II(GO:0009517) light-harvesting complex(GO:0030076)
0.1 0.6 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.1 6.4 GO:0010287 plastoglobule(GO:0010287)
0.1 1.0 GO:0009538 photosystem I reaction center(GO:0009538)
0.1 0.3 GO:0032432 actin filament bundle(GO:0032432)
0.1 0.3 GO:0005674 transcription factor TFIIF complex(GO:0005674)
0.1 0.3 GO:0045495 P granule(GO:0043186) pole plasm(GO:0045495) germ plasm(GO:0060293)
0.1 1.6 GO:0000786 nucleosome(GO:0000786)
0.1 1.2 GO:0030131 clathrin adaptor complex(GO:0030131)
0.1 0.4 GO:0031314 extrinsic component of mitochondrial inner membrane(GO:0031314)
0.1 0.3 GO:0031417 N-terminal protein acetyltransferase complex(GO:0031414) NatC complex(GO:0031417)
0.1 1.2 GO:0031902 late endosome membrane(GO:0031902)
0.1 1.8 GO:0009898 cytoplasmic side of plasma membrane(GO:0009898)
0.1 0.2 GO:0000110 nucleotide-excision repair factor 1 complex(GO:0000110)
0.1 1.5 GO:0000148 1,3-beta-D-glucan synthase complex(GO:0000148)
0.1 0.6 GO:0071012 U2-type catalytic step 1 spliceosome(GO:0071006) catalytic step 1 spliceosome(GO:0071012)
0.1 0.9 GO:0032806 holo TFIIH complex(GO:0005675) carboxy-terminal domain protein kinase complex(GO:0032806)
0.1 1.1 GO:0071458 integral component of cytoplasmic side of endoplasmic reticulum membrane(GO:0071458) cytoplasmic side of endoplasmic reticulum membrane(GO:0098554)
0.1 0.5 GO:0009522 photosystem I(GO:0009522)
0.1 0.4 GO:0001673 male germ cell nucleus(GO:0001673)
0.1 1.1 GO:0005779 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.1 4.2 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.1 0.7 GO:0030118 clathrin coat(GO:0030118) clathrin vesicle coat(GO:0030125)
0.1 1.1 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)
0.1 1.4 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.1 1.3 GO:0045239 tricarboxylic acid cycle enzyme complex(GO:0045239)
0.1 0.3 GO:0046695 SLIK (SAGA-like) complex(GO:0046695)
0.1 0.3 GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex(GO:0034098)
0.1 0.3 GO:0009897 external side of plasma membrane(GO:0009897)
0.1 1.1 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.1 0.3 GO:0043076 megasporocyte nucleus(GO:0043076) polar nucleus(GO:0043078)
0.0 0.8 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.0 1.7 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 0.4 GO:0072546 ER membrane protein complex(GO:0072546)
0.0 0.3 GO:0005787 signal peptidase complex(GO:0005787)
0.0 0.7 GO:0031011 Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.0 0.2 GO:0000164 protein phosphatase type 1 complex(GO:0000164)
0.0 0.1 GO:0031080 nuclear pore outer ring(GO:0031080)
0.0 0.2 GO:0031380 RNA-directed RNA polymerase complex(GO:0031379) nuclear RNA-directed RNA polymerase complex(GO:0031380)
0.0 1.0 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.0 5.6 GO:0099503 secretory vesicle(GO:0099503)
0.0 0.2 GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276)
0.0 1.5 GO:0031201 SNARE complex(GO:0031201)
0.0 0.1 GO:0005884 actin filament(GO:0005884)
0.0 0.1 GO:0033588 Elongator holoenzyme complex(GO:0033588)
0.0 0.5 GO:0005769 early endosome(GO:0005769)
0.0 0.2 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.0 0.5 GO:0031307 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.1 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.0 2.0 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 0.7 GO:0030176 integral component of endoplasmic reticulum membrane(GO:0030176)
0.0 0.2 GO:0070461 SAGA-type complex(GO:0070461)
0.0 0.4 GO:0005778 peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903)
0.0 0.2 GO:0017119 Golgi transport complex(GO:0017119)
0.0 0.0 GO:0031227 intrinsic component of endoplasmic reticulum membrane(GO:0031227)
0.0 0.5 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 5.6 GO:0005777 peroxisome(GO:0005777) microbody(GO:0042579)
0.0 0.1 GO:0031248 histone acetyltransferase complex(GO:0000123) protein acetyltransferase complex(GO:0031248) acetyltransferase complex(GO:1902493)
0.0 0.2 GO:0035267 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.0 0.8 GO:0090575 RNA polymerase II transcription factor complex(GO:0090575)
0.0 0.1 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.0 0.1 GO:0031083 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.0 3.6 GO:0009579 thylakoid(GO:0009579)
0.0 8.1 GO:0009941 chloroplast envelope(GO:0009941)
0.0 5.4 GO:0044434 chloroplast part(GO:0044434)
0.0 0.2 GO:0005763 mitochondrial small ribosomal subunit(GO:0005763)
0.0 0.2 GO:0008180 COP9 signalosome(GO:0008180)
0.0 1.7 GO:0080008 Cul4-RING E3 ubiquitin ligase complex(GO:0080008)
0.0 0.0 GO:0097550 transcriptional preinitiation complex(GO:0097550)
0.0 0.2 GO:0005885 Arp2/3 protein complex(GO:0005885)
0.0 0.3 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.1 GO:0016281 eukaryotic translation initiation factor 4F complex(GO:0016281)
0.0 0.1 GO:0031519 PcG protein complex(GO:0031519)
0.0 0.5 GO:0005667 transcription factor complex(GO:0005667)
0.0 0.1 GO:0030906 retromer, cargo-selective complex(GO:0030906)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 4.0 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.9 2.6 GO:0080104 3-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080102) 5-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080104) 7-methylthiopropyl glucosinolate S-oxygenase activity(GO:0080106)
0.7 2.9 GO:0030410 nicotianamine synthase activity(GO:0030410)
0.6 3.7 GO:0004848 ureidoglycolate hydrolase activity(GO:0004848)
0.6 2.3 GO:0004737 pyruvate decarboxylase activity(GO:0004737)
0.5 1.6 GO:0000249 C-22 sterol desaturase activity(GO:0000249)
0.5 1.6 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.5 4.3 GO:0047216 inositol 3-alpha-galactosyltransferase activity(GO:0047216)
0.5 1.9 GO:0070401 NADP+ binding(GO:0070401)
0.4 1.7 GO:0019156 isoamylase activity(GO:0019156)
0.4 1.3 GO:0003861 3-isopropylmalate dehydratase activity(GO:0003861)
0.4 1.7 GO:0003852 2-isopropylmalate synthase activity(GO:0003852)
0.4 1.6 GO:0016040 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.4 4.4 GO:0033743 peptide-methionine (R)-S-oxide reductase activity(GO:0033743)
0.4 1.2 GO:0009671 nitrate:proton symporter activity(GO:0009671)
0.4 2.7 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.4 1.1 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.4 1.5 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.4 1.1 GO:0004133 glycogen debranching enzyme activity(GO:0004133)
0.4 1.1 GO:0004375 glycine dehydrogenase (decarboxylating) activity(GO:0004375) oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor(GO:0016642)
0.4 1.8 GO:0004333 fumarate hydratase activity(GO:0004333)
0.4 1.4 GO:0004350 glutamate 5-kinase activity(GO:0004349) glutamate-5-semialdehyde dehydrogenase activity(GO:0004350)
0.3 1.3 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.3 1.8 GO:0015369 calcium:proton antiporter activity(GO:0015369)
0.3 0.9 GO:0035671 enone reductase activity(GO:0035671)
0.3 0.9 GO:0047364 desulfoglucosinolate sulfotransferase activity(GO:0047364)
0.3 0.8 GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity(GO:0008898) betaine-homocysteine S-methyltransferase activity(GO:0047150)
0.3 1.8 GO:0016781 phosphotransferase activity, paired acceptors(GO:0016781)
0.3 1.0 GO:0004671 protein C-terminal carboxyl O-methyltransferase activity(GO:0003880) protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity(GO:0004671)
0.2 1.2 GO:0036374 peptidyltransferase activity(GO:0000048) glutathione hydrolase activity(GO:0036374)
0.2 0.7 GO:0004462 lactoylglutathione lyase activity(GO:0004462)
0.2 1.0 GO:0004307 ethanolaminephosphotransferase activity(GO:0004307)
0.2 1.0 GO:0015368 calcium:cation antiporter activity(GO:0015368)
0.2 0.7 GO:0004412 homoserine dehydrogenase activity(GO:0004412)
0.2 2.1 GO:0004020 adenylylsulfate kinase activity(GO:0004020)
0.2 1.3 GO:0005230 ionotropic glutamate receptor activity(GO:0004970) extracellular ligand-gated ion channel activity(GO:0005230) transmitter-gated ion channel activity(GO:0022824) transmitter-gated channel activity(GO:0022835) neurotransmitter receptor activity(GO:0030594)
0.2 1.3 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.2 1.6 GO:0004506 squalene monooxygenase activity(GO:0004506)
0.2 1.2 GO:0016312 inositol bisphosphate phosphatase activity(GO:0016312)
0.2 1.2 GO:0019904 protein domain specific binding(GO:0019904)
0.2 0.8 GO:0051998 protein carboxyl O-methyltransferase activity(GO:0051998)
0.2 1.7 GO:0004096 catalase activity(GO:0004096)
0.2 0.9 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.2 2.4 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.2 1.3 GO:0033201 starch synthase activity(GO:0009011) alpha-1,4-glucan synthase activity(GO:0033201)
0.2 2.0 GO:0008061 chitin binding(GO:0008061)
0.2 0.8 GO:0008430 selenium binding(GO:0008430)
0.2 0.8 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.2 0.6 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.1 0.5 GO:0016314 phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity(GO:0016314)
0.1 0.6 GO:0042132 fructose 1,6-bisphosphate 1-phosphatase activity(GO:0042132)
0.1 0.4 GO:0003844 1,4-alpha-glucan branching enzyme activity(GO:0003844)
0.1 0.4 GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity(GO:0000179)
0.1 0.5 GO:0034722 gamma-glutamyl-peptidase activity(GO:0034722)
0.1 1.9 GO:0016844 strictosidine synthase activity(GO:0016844)
0.1 0.4 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.1 0.7 GO:0010313 phytochrome binding(GO:0010313)
0.1 0.9 GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity(GO:0004739)
0.1 3.2 GO:0016168 chlorophyll binding(GO:0016168)
0.1 0.5 GO:0004475 mannose-1-phosphate guanylyltransferase activity(GO:0004475)
0.1 0.7 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 0.5 GO:0042299 lupeol synthase activity(GO:0042299)
0.1 0.4 GO:0047874 dolichyldiphosphatase activity(GO:0047874)
0.1 0.5 GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018)
0.1 0.4 GO:0043812 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.1 0.6 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.1 0.9 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.1 2.3 GO:0022839 calcium activated cation channel activity(GO:0005227) ion gated channel activity(GO:0022839)
0.1 0.7 GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines(GO:0016813)
0.1 3.7 GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor(GO:0016671)
0.1 0.8 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.1 1.0 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.1 0.8 GO:2001070 starch binding(GO:2001070)
0.1 1.1 GO:0004602 glutathione peroxidase activity(GO:0004602)
0.1 0.5 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 0.5 GO:0004108 citrate (Si)-synthase activity(GO:0004108) citrate synthase activity(GO:0036440)
0.1 0.3 GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity(GO:0008963)
0.1 1.0 GO:0017136 NAD-dependent histone deacetylase activity(GO:0017136) histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) NAD-dependent protein deacetylase activity(GO:0034979)
0.1 0.3 GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity(GO:0003857)
0.1 0.5 GO:0008184 glycogen phosphorylase activity(GO:0008184)
0.1 0.6 GO:0005483 soluble NSF attachment protein activity(GO:0005483)
0.1 1.4 GO:0008028 monocarboxylic acid transmembrane transporter activity(GO:0008028)
0.1 2.2 GO:0008559 xenobiotic-transporting ATPase activity(GO:0008559)
0.1 0.8 GO:0030151 molybdenum ion binding(GO:0030151)
0.1 0.2 GO:0005315 inorganic phosphate transmembrane transporter activity(GO:0005315)
0.1 0.9 GO:0004362 glutathione-disulfide reductase activity(GO:0004362)
0.1 0.8 GO:0003954 NADH dehydrogenase activity(GO:0003954)
0.1 4.6 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.1 0.6 GO:0019825 oxygen binding(GO:0019825)
0.1 0.3 GO:0004046 aminoacylase activity(GO:0004046)
0.1 0.3 GO:0070259 tyrosyl-DNA phosphodiesterase activity(GO:0070259)
0.1 2.0 GO:0003756 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.1 0.4 GO:0004765 shikimate kinase activity(GO:0004765)
0.1 0.6 GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)(GO:0016703)
0.1 1.0 GO:0102391 acyl-CoA ligase activity(GO:0003996) long-chain fatty acid-CoA ligase activity(GO:0004467) decanoate--CoA ligase activity(GO:0102391)
0.1 0.6 GO:0030332 cyclin binding(GO:0030332)
0.1 0.4 GO:0005460 UDP-glucose transmembrane transporter activity(GO:0005460)
0.1 0.5 GO:0051723 protein methylesterase activity(GO:0051723)
0.1 0.6 GO:0004834 tryptophan synthase activity(GO:0004834)
0.1 1.5 GO:0003843 1,3-beta-D-glucan synthase activity(GO:0003843)
0.1 0.7 GO:1904680 oligopeptide transmembrane transporter activity(GO:0035673) peptide transmembrane transporter activity(GO:1904680)
0.1 1.3 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.1 0.8 GO:0004435 phosphatidylinositol phospholipase C activity(GO:0004435)
0.1 0.2 GO:0047134 protein-disulfide reductase activity(GO:0047134)
0.1 0.4 GO:0050113 inositol oxygenase activity(GO:0050113)
0.1 0.7 GO:0004869 cysteine-type endopeptidase inhibitor activity(GO:0004869)
0.1 2.2 GO:0008266 poly(U) RNA binding(GO:0008266)
0.1 1.2 GO:0008146 sulfotransferase activity(GO:0008146)
0.1 0.6 GO:0050307 sucrose-phosphate phosphatase activity(GO:0050307)
0.1 0.2 GO:0016979 lipoate-protein ligase activity(GO:0016979) lipoate synthase activity(GO:0016992)
0.1 0.5 GO:0052852 very-long-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052852) long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity(GO:0052853) medium-chain-(S)-2-hydroxy-acid oxidase activity(GO:0052854)
0.1 3.1 GO:0003727 single-stranded RNA binding(GO:0003727)
0.1 1.0 GO:0030674 protein binding, bridging(GO:0030674)
0.1 0.2 GO:0019789 SUMO transferase activity(GO:0019789)
0.1 0.3 GO:0004325 ferrochelatase activity(GO:0004325)
0.1 0.5 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.1 0.3 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.1 0.9 GO:0070567 cytidylyltransferase activity(GO:0070567)
0.1 0.6 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.1 0.3 GO:0005247 voltage-gated chloride channel activity(GO:0005247) chloride channel activity(GO:0005254)
0.1 0.7 GO:0004565 beta-galactosidase activity(GO:0004565)
0.1 0.5 GO:0032977 membrane insertase activity(GO:0032977)
0.1 0.2 GO:0045430 chalcone isomerase activity(GO:0045430)
0.1 1.9 GO:0044183 protein binding involved in protein folding(GO:0044183)
0.1 0.4 GO:0046923 ER retention sequence binding(GO:0046923)
0.1 0.5 GO:0080046 quercetin 4'-O-glucosyltransferase activity(GO:0080046)
0.1 0.3 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.1 0.5 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.1 1.2 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.1 0.2 GO:0051377 mannose-ethanolamine phosphotransferase activity(GO:0051377)
0.1 0.7 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.1 0.5 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.1 0.3 GO:0030371 translation repressor activity(GO:0030371)
0.1 0.9 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.1 1.1 GO:0043295 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.1 0.4 GO:0008157 protein phosphatase 1 binding(GO:0008157)
0.1 0.3 GO:0050664 NAD(P)H oxidase activity(GO:0016174) oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor(GO:0050664)
0.1 0.5 GO:0008318 protein prenyltransferase activity(GO:0008318)
0.1 0.4 GO:0009916 alternative oxidase activity(GO:0009916)
0.1 0.4 GO:0004356 glutamate-ammonia ligase activity(GO:0004356)
0.1 0.4 GO:0017091 AU-rich element binding(GO:0017091)
0.1 0.3 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.1 0.3 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.1 0.2 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.1 0.4 GO:0043855 intracellular cyclic nucleotide activated cation channel activity(GO:0005221) cyclic nucleotide-gated ion channel activity(GO:0043855)
0.1 0.9 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.0 0.4 GO:0016423 tRNA (guanine) methyltransferase activity(GO:0016423)
0.0 1.2 GO:0005345 purine nucleobase transmembrane transporter activity(GO:0005345)
0.0 4.5 GO:0008422 beta-glucosidase activity(GO:0008422)
0.0 0.6 GO:0032440 2-alkenal reductase [NAD(P)] activity(GO:0032440)
0.0 0.3 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.0 0.5 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.0 0.5 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.0 0.2 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
0.0 2.6 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631) ubiquitin-like protein conjugating enzyme activity(GO:0061650)
0.0 0.5 GO:0000293 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 0.3 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.0 1.4 GO:0048029 monosaccharide binding(GO:0048029)
0.0 0.4 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.0 0.8 GO:0003951 NAD+ kinase activity(GO:0003951)
0.0 0.3 GO:0000990 transcription factor activity, core RNA polymerase binding(GO:0000990)
0.0 1.0 GO:0016868 intramolecular transferase activity, phosphotransferases(GO:0016868)
0.0 0.1 GO:0001054 RNA polymerase I activity(GO:0001054) RNA polymerase III activity(GO:0001056)
0.0 0.1 GO:0001046 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.0 0.1 GO:0004477 methenyltetrahydrofolate cyclohydrolase activity(GO:0004477) methylenetetrahydrofolate dehydrogenase (NADP+) activity(GO:0004488)
0.0 1.1 GO:0070566 adenylyltransferase activity(GO:0070566)
0.0 0.5 GO:0051747 cytosine C-5 DNA demethylase activity(GO:0051747)
0.0 0.2 GO:0070034 telomerase RNA binding(GO:0070034)
0.0 0.2 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.0 0.3 GO:0016151 nickel cation binding(GO:0016151)
0.0 0.5 GO:0016208 AMP binding(GO:0016208)
0.0 1.1 GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor(GO:0016655)
0.0 0.1 GO:0004618 phosphoglycerate kinase activity(GO:0004618)
0.0 2.0 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 0.2 GO:0003968 RNA-directed RNA polymerase activity(GO:0003968)
0.0 0.3 GO:0004526 ribonuclease P activity(GO:0004526)
0.0 0.1 GO:0003986 acetyl-CoA hydrolase activity(GO:0003986)
0.0 0.3 GO:0003906 DNA-(apurinic or apyrimidinic site) lyase activity(GO:0003906)
0.0 1.3 GO:0080030 methyl indole-3-acetate esterase activity(GO:0080030)
0.0 0.2 GO:0016872 intramolecular lyase activity(GO:0016872)
0.0 0.6 GO:0034595 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity(GO:0004439) phosphatidylinositol phosphate 5-phosphatase activity(GO:0034595)
0.0 0.2 GO:0042171 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.0 0.3 GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity(GO:0003860)
0.0 0.3 GO:0051537 2 iron, 2 sulfur cluster binding(GO:0051537)
0.0 3.9 GO:0030246 carbohydrate binding(GO:0030246)
0.0 0.3 GO:0042500 aspartic endopeptidase activity, intramembrane cleaving(GO:0042500)
0.0 0.9 GO:0005496 steroid binding(GO:0005496)
0.0 0.1 GO:0008460 dTDP-glucose 4,6-dehydratase activity(GO:0008460)
0.0 0.1 GO:1990380 Lys48-specific deubiquitinase activity(GO:1990380)
0.0 0.2 GO:0010011 auxin binding(GO:0010011)
0.0 1.0 GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors(GO:0016706)
0.0 1.4 GO:0008080 N-acetyltransferase activity(GO:0008080)
0.0 0.4 GO:0043175 RNA polymerase II core binding(GO:0000993) RNA polymerase core enzyme binding(GO:0043175)
0.0 1.3 GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor(GO:0016620)
0.0 0.2 GO:0003988 acetyl-CoA C-acyltransferase activity(GO:0003988)
0.0 1.2 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.7 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.0 0.3 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.0 0.2 GO:0000095 S-adenosyl-L-methionine transmembrane transporter activity(GO:0000095) coenzyme transporter activity(GO:0051185)
0.0 0.8 GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity(GO:0015450)
0.0 43.9 GO:0003700 nucleic acid binding transcription factor activity(GO:0001071) transcription factor activity, sequence-specific DNA binding(GO:0003700)
0.0 0.1 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.0 0.1 GO:0004057 arginyltransferase activity(GO:0004057)
0.0 0.6 GO:0031386 protein tag(GO:0031386)
0.0 1.5 GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds(GO:0016799)
0.0 0.1 GO:0004750 ribulose-phosphate 3-epimerase activity(GO:0004750)
0.0 1.3 GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides(GO:0016811)
0.0 0.2 GO:0019210 kinase inhibitor activity(GO:0019210)
0.0 0.3 GO:0016780 phosphotransferase activity, for other substituted phosphate groups(GO:0016780)
0.0 0.1 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.0 1.2 GO:0004185 serine-type carboxypeptidase activity(GO:0004185)
0.0 0.9 GO:0003713 transcription coactivator activity(GO:0003713)
0.0 0.8 GO:0005319 lipid transporter activity(GO:0005319)
0.0 0.4 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.0 0.5 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.3 GO:0008409 5'-3' exonuclease activity(GO:0008409)
0.0 0.3 GO:0030276 clathrin binding(GO:0030276)
0.0 0.2 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 0.0 GO:0016843 amine-lyase activity(GO:0016843)
0.0 0.1 GO:0004326 tetrahydrofolylpolyglutamate synthase activity(GO:0004326)
0.0 0.2 GO:0030295 kinase activator activity(GO:0019209) protein kinase activator activity(GO:0030295)
0.0 0.1 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.0 0.3 GO:0015174 basic amino acid transmembrane transporter activity(GO:0015174)
0.0 1.4 GO:0008047 enzyme activator activity(GO:0008047)
0.0 0.0 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.0 0.1 GO:0102360 daphnetin 3-O-glucosyltransferase activity(GO:0102360)
0.0 0.1 GO:0003910 DNA ligase activity(GO:0003909) DNA ligase (ATP) activity(GO:0003910)
0.0 0.1 GO:0004149 dihydrolipoyllysine-residue succinyltransferase activity(GO:0004149) succinyltransferase activity(GO:0016748) S-succinyltransferase activity(GO:0016751)
0.0 0.5 GO:0005179 hormone activity(GO:0005179)
0.0 1.0 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 0.1 GO:0001102 RNA polymerase II activating transcription factor binding(GO:0001102)
0.0 0.2 GO:0000149 SNARE binding(GO:0000149)
0.0 0.1 GO:0042781 3'-tRNA processing endoribonuclease activity(GO:0042781)
0.0 0.2 GO:0070628 proteasome binding(GO:0070628)
0.0 1.8 GO:0043531 ADP binding(GO:0043531)
0.0 0.1 GO:0030942 endoplasmic reticulum signal peptide binding(GO:0030942)
0.0 1.1 GO:0051015 actin filament binding(GO:0051015)
0.0 0.0 GO:0004563 beta-N-acetylhexosaminidase activity(GO:0004563)
0.0 0.0 GO:0005353 fructose transmembrane transporter activity(GO:0005353)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.4 PID ARF6 DOWNSTREAM PATHWAY Arf6 downstream pathway
0.1 0.4 SA G1 AND S PHASES Cdk2, 4, and 6 bind cyclin D in G1, while cdk2/cyclin E promotes the G1/S transition.
0.1 0.7 PID AP1 PATHWAY AP-1 transcription factor network
0.1 0.6 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.1 0.4 ST ERK1 ERK2 MAPK PATHWAY ERK1/ERK2 MAPK Pathway
0.1 0.4 NABA MATRISOME ASSOCIATED Ensemble of genes encoding ECM-associated proteins including ECM-affilaited proteins, ECM regulators and secreted factors
0.1 0.2 PID AMB2 NEUTROPHILS PATHWAY amb2 Integrin signaling
0.1 0.5 PID NOTCH PATHWAY Notch signaling pathway
0.0 0.5 PID E2F PATHWAY E2F transcription factor network
0.0 0.1 PID HIF2PATHWAY HIF-2-alpha transcription factor network
0.0 0.2 PID CDC42 PATHWAY CDC42 signaling events
0.0 0.1 ST G ALPHA I PATHWAY G alpha i Pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.2 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation
0.3 0.8 REACTOME REGULATION OF INSULIN SECRETION Genes involved in Regulation of Insulin Secretion
0.2 1.5 REACTOME INTERFERON SIGNALING Genes involved in Interferon Signaling
0.1 0.5 REACTOME SIGNALING BY NOTCH1 Genes involved in Signaling by NOTCH1
0.1 0.6 REACTOME RECYCLING OF BILE ACIDS AND SALTS Genes involved in Recycling of bile acids and salts
0.1 0.3 REACTOME SYNTHESIS OF PIPS AT THE GOLGI MEMBRANE Genes involved in Synthesis of PIPs at the Golgi membrane
0.1 0.3 REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION Genes involved in Amino acid synthesis and interconversion (transamination)
0.1 0.1 REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION Genes involved in Transcriptional Regulation of White Adipocyte Differentiation
0.1 0.3 REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION Genes involved in Apoptosis induced DNA fragmentation
0.1 0.5 REACTOME G0 AND EARLY G1 Genes involved in G0 and Early G1
0.1 0.3 REACTOME INNATE IMMUNE SYSTEM Genes involved in Innate Immune System
0.0 0.1 REACTOME FRS2 MEDIATED CASCADE Genes involved in FRS2-mediated cascade
0.0 0.2 REACTOME FORMATION OF INCISION COMPLEX IN GG NER Genes involved in Formation of incision complex in GG-NER
0.0 0.5 REACTOME FATTY ACID TRIACYLGLYCEROL AND KETONE BODY METABOLISM Genes involved in Fatty acid, triacylglycerol, and ketone body metabolism
0.0 0.3 REACTOME TCA CYCLE AND RESPIRATORY ELECTRON TRANSPORT Genes involved in The citric acid (TCA) cycle and respiratory electron transport