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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT4G25490

Z-value: 0.50

Transcription factors associated with AT4G25490

Gene Symbol Gene ID Gene Info
AT4G25490
AT4G25490 C-repeat/DRE binding factor 1

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
CBF1arTal_v1_Chr4_-_13022996_13022996-0.498.4e-03Click!

Activity profile of AT4G25490 motif

Sorted Z-values of AT4G25490 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr4_-_18098633 1.62 AT4G38770.1
PRP4
proline-rich protein 4
Chr3_+_5505360 1.49 AT3G16240.1
DELTA-TIP
delta tonoplast integral protein
Chr1_-_29635931 1.30 AT1G78820.1
AT1G78820
D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein
Chr4_-_7493080 1.22 AT4G12730.1
FLA2
FASCICLIN-like arabinogalactan 2
Chr5_+_8863224 1.16 AT5G25460.1
DGR2
transmembrane protein, putative (Protein of unknown function, DUF642)
Chr3_+_5556710 1.15 AT3G16370.1
AT3G16370
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr5_-_15382071 1.11 AT5G38420.1
RBCS2B
Ribulose bisphosphate carboxylase (small chain) family protein
Chr2_-_18744322 1.06 AT2G45470.1
FLA8
FASCICLIN-like arabinogalactan protein 8
Chr4_-_17777445 1.03 AT4G37800.1
XTH7
xyloglucan endotransglucosylase/hydrolase 7
Chr3_+_23345754 1.01 AT3G63200.1
PLP9
PATATIN-like protein 9
Chr3_-_4008018 1.00 AT3G12610.1
DRT100
Leucine-rich repeat (LRR) family protein
Chr4_+_12660687 1.00 AT4G24510.1
CER2
HXXXD-type acyl-transferase family protein
Chr5_+_17760865 0.99 AT5G44130.1
FLA13
FASCICLIN-like arabinogalactan protein 13 precursor
Chr5_-_22560461 0.99 AT5G55730.2
AT5G55730.1
FLA1
FASCICLIN-like arabinogalactan 1
Chr5_+_26767599 0.98 AT5G67070.1
RALFL34
ralf-like 34
Chr4_+_13391293 0.98 AT4G26530.2
AT4G26530.1
FBA5
Aldolase superfamily protein
Chr1_+_10375599 0.97 AT1G29670.2
AT1G29670
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_+_10375754 0.97 AT1G29670.1
AT1G29670
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_-_8589754 0.95 AT3G23810.1
SAHH2
S-adenosyl-l-homocysteine (SAH) hydrolase 2
Chr3_-_8902835 0.95 AT3G24480.1
AT3G24480
Leucine-rich repeat (LRR) family protein
Chr5_+_26298728 0.95 AT5G65730.1
XTH6
xyloglucan endotransglucosylase/hydrolase 6
Chr4_+_13390754 0.94 AT4G26530.3
FBA5
Aldolase superfamily protein
Chr4_+_14304921 0.92 AT4G29020.2
AT4G29020.1
AT4G29020
glycine-rich protein
Chr2_+_2199151 0.92 AT2G05790.1
AT2G05790
O-Glycosyl hydrolases family 17 protein
Chr1_+_10371675 0.91 AT1G29660.1
AT1G29660
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr2_-_17648945 0.91 AT2G42380.1
AT2G42380.4
AT2G42380.3
AT2G42380.2
AT2G42380.5
BZIP34
Basic-leucine zipper (bZIP) transcription factor family protein
Chr5_+_21020014 0.91 AT5G51750.1
SBT1.3
subtilase 1.3
Chr5_+_4087689 0.89 AT5G12940.1
AT5G12940
Leucine-rich repeat (LRR) family protein
Chr1_+_17918207 0.88 AT1G48480.1
RKL1
receptor-like kinase 1
Chr1_+_20614573 0.87 AT1G55260.1
AT1G55260.2
AT1G55260
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr1_-_4530222 0.87 AT1G13250.1
GATL3
galacturonosyltransferase-like 3
Chr2_-_15789605 0.87 AT2G37640.2
EXP3
Barwin-like endoglucanases superfamily protein
Chr3_-_4744263 0.86 AT3G14240.1
AT3G14240
Subtilase family protein
Chr1_-_26711462 0.85 AT1G70830.4
AT1G70830.2
AT1G70830.1
AT1G70830.5
AT1G70830.3
MLP28
MLP-like protein 28
Chr3_-_2334185 0.84 AT3G07320.1
AT3G07320
O-Glycosyl hydrolases family 17 protein
Chr4_-_17606924 0.84 AT4G37450.1
AT4G37450.2
AGP18
arabinogalactan protein 18
Chr5_-_1293723 0.84 AT5G04530.1
KCS19
3-ketoacyl-CoA synthase 19
Chr4_-_10278794 0.84 AT4G18670.1
AT4G18670
Leucine-rich repeat (LRR) family protein
Chr2_-_15790139 0.84 AT2G37640.1
EXP3
Barwin-like endoglucanases superfamily protein
Chr4_+_12390167 0.83 AT4G23800.1
AT4G23800.2
3xHMG-box2
HMG (high mobility group) box protein
Chr2_+_8940833 0.82 AT2G20750.2
AT2G20750.1
EXPB1
expansin B1
Chr2_+_2763449 0.82 AT2G06850.1
AT2G06850.2
XTH4
xyloglucan endotransglucosylase/hydrolase 4
Chr5_-_2185972 0.82 AT5G07030.1
AT5G07030
Eukaryotic aspartyl protease family protein
Chr2_+_6571 0.82 AT2G01021.1
AT2G01021
hypothetical protein
Chr5_+_18528267 0.81 AT5G45670.1
AT5G45670
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr4_-_12768239 0.81 AT4G24770.1
RBP31
31-kDa RNA binding protein
Chr3_+_8586359 0.81 AT3G23805.1
RALFL24
ralf-like 24
Chr2_-_9062093 0.81 AT2G21140.1
PRP2
proline-rich protein 2
Chr4_-_12769419 0.81 AT4G24770.2
RBP31
31-kDa RNA binding protein
Chr3_-_977474 0.81 AT3G03820.1
SAUR29
SAUR-like auxin-responsive protein family
Chr1_-_3880391 0.79 AT1G11545.1
XTH8
xyloglucan endotransglucosylase/hydrolase 8
Chr1_-_7043392 0.79 AT1G20340.1
DRT112
Cupredoxin superfamily protein
Chr5_+_16468327 0.78 AT5G41140.1
AT5G41140.2
AT5G41140
Myosin heavy chain-related protein
Chr1_-_28419635 0.78 AT1G75680.1
GH9B7
glycosyl hydrolase 9B7
Chr4_+_15401640 0.77 AT4G31840.1
ENODL15
early nodulin-like protein 15
Chr3_+_5314817 0.77 AT3G15680.1
AT3G15680.2
AT3G15680
Ran BP2/NZF zinc finger-like superfamily protein
Chr2_+_15059763 0.77 AT2G35860.1
FLA16
FASCICLIN-like arabinogalactan protein 16 precursor
Chr4_-_8307934 0.76 AT4G14440.1
HCD1
3-hydroxyacyl-CoA dehydratase 1
Chr3_-_3027961 0.76 AT3G09870.1
AT3G09870
SAUR-like auxin-responsive protein family
Chr5_+_3889906 0.75 AT5G12050.1
AT5G12050
rho GTPase-activating protein
Chr5_+_5237970 0.75 AT5G16030.1
AT5G16030.4
AT5G16030.2
AT5G16030.3
AT5G16030
mental retardation GTPase activating protein
Chr3_-_1136397 0.75 AT3G04290.1
LTL1
Li-tolerant lipase 1
Chr5_-_24990331 0.74 AT5G62220.1
GT18
glycosyltransferase 18
Chr2_+_1676999 0.74 AT2G04780.2
FLA7
FASCICLIN-like arabinoogalactan 7
Chr1_+_29575806 0.74 AT1G78630.1
emb1473
Ribosomal protein L13 family protein
Chr1_+_310169 0.74 AT1G01900.1
SBTI1.1
subtilase family protein
Chr5_-_8916856 0.74 AT5G25610.1
RD22
BURP domain-containing protein
Chr5_-_990630 0.74 AT5G03760.1
ATCSLA09
Nucleotide-diphospho-sugar transferases superfamily protein
Chr2_+_14216771 0.74 AT2G33570.1
GALS1
glycosyltransferase family protein (DUF23)
Chr1_+_12267808 0.74 AT1G33811.1
AT1G33811
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr3_+_18973126 0.73 AT3G51080.1
GATA6
GATA transcription factor 6
Chr5_-_7652714 0.73 AT5G22880.1
HTB2
histone B2
Chr5_-_6842946 0.73 AT5G20270.1
HHP1
heptahelical transmembrane protein1
Chr4_+_160643 0.73 AT4G00360.1
CYP86A2
cytochrome P450, family 86, subfamily A, polypeptide 2
Chr2_+_17592038 0.73 AT2G42220.1
AT2G42220
Rhodanese/Cell cycle control phosphatase superfamily protein
Chr3_-_19595834 0.73 AT3G52870.1
AT3G52870
IQ calmodulin-binding motif family protein
Chr5_-_3183484 0.72 AT5G10150.3
AT5G10150.4
AT5G10150
UPSTREAM OF FLC protein (DUF966)
Chr4_-_18067873 0.71 AT4G38660.2
AT4G38660
Pathogenesis-related thaumatin superfamily protein
Chr5_+_5238502 0.71 AT5G16030.5
AT5G16030
mental retardation GTPase activating protein
Chr4_-_13958107 0.71 AT4G28080.1
AT4G28080
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr2_+_1676717 0.71 AT2G04780.1
FLA7
FASCICLIN-like arabinoogalactan 7
Chr1_+_898480 0.71 AT1G03600.1
PSB27
photosystem II family protein
Chr4_-_15429113 0.70 AT4G31890.2
AT4G31890.1
AT4G31890.3
AT4G31890
ARM repeat superfamily protein
Chr2_+_13647699 0.70 AT2G32100.1
OFP16
ovate family protein 16
Chr5_+_3157980 0.70 AT5G10100.2
TPPI
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr3_-_20903080 0.70 AT3G56370.1
AT3G56370
Leucine-rich repeat protein kinase family protein
Chr3_-_373805 0.70 AT3G02110.1
scpl25
serine carboxypeptidase-like 25
Chr2_-_15474717 0.69 AT2G36870.2
AT2G36870.1
XTH32
xyloglucan endotransglucosylase/hydrolase 32
Chr3_+_2712236 0.69 AT3G08920.1
AT3G08920
Rhodanese/Cell cycle control phosphatase superfamily protein
Chr1_+_418726 0.69 AT1G02205.4
AT1G02205.3
AT1G02205.5
AT1G02205.1
CER1
Fatty acid hydroxylase superfamily
Chr4_+_15819489 0.69 AT4G32800.1
AT4G32800
Integrase-type DNA-binding superfamily protein
Chr3_+_18262290 0.68 AT3G49260.1
AT3G49260.3
AT3G49260.2
AT3G49260.4
iqd21
IQ-domain 21
Chr3_-_23328789 0.68 AT3G63140.1
CSP41A
chloroplast stem-loop binding protein of 41 kDa
Chr3_-_19139423 0.68 AT3G51600.1
LTP5
lipid transfer protein 5
Chr5_-_18026077 0.68 AT5G44680.1
AT5G44680
DNA glycosylase superfamily protein
Chr1_-_1349478 0.67 AT1G04800.1
AT1G04800
glycine-rich protein
Chr5_+_2680401 0.67 AT5G08330.1
TCP11
TCP family transcription factor
Chr4_-_15059846 0.67 AT4G30950.1
FAD6
fatty acid desaturase 6
Chr1_-_983544 0.67 AT1G03870.1
FLA9
FASCICLIN-like arabinoogalactan 9
Chr5_-_3183984 0.67 AT5G10150.2
AT5G10150.1
AT5G10150
UPSTREAM OF FLC protein (DUF966)
Chr4_-_17181261 0.67 AT4G36360.2
BGAL3
beta-galactosidase 3
Chr4_-_17181466 0.67 AT4G36360.1
BGAL3
beta-galactosidase 3
Chr4_-_17355891 0.67 AT4G36850.3
AT4G36850.4
AT4G36850.2
AT4G36850.1
AT4G36850
PQ-loop repeat family protein / transmembrane family protein
Chr5_+_1952505 0.67 AT5G06390.1
FLA17
FASCICLIN-like arabinogalactan protein 17 precursor
Chr4_-_12772438 0.66 AT4G24780.1
AT4G24780.2
AT4G24780
Pectin lyase-like superfamily protein
Chr3_+_6105908 0.66 AT3G17840.1
RLK902
receptor-like kinase 902
Chr1_-_6319427 0.66 AT1G18360.1
AT1G18360
alpha/beta-Hydrolases superfamily protein
Chr2_-_9130212 0.66 AT2G21330.3
AT2G21330.2
FBA1
fructose-bisphosphate aldolase 1
Chr4_-_18068293 0.66 AT4G38660.1
AT4G38660
Pathogenesis-related thaumatin superfamily protein
Chr2_-_9130619 0.65 AT2G21330.1
FBA1
fructose-bisphosphate aldolase 1
Chr5_+_6670275 0.65 AT5G19730.1
AT5G19730
Pectin lyase-like superfamily protein
Chr4_-_13398307 0.65 AT4G26540.1
AT4G26540
Leucine-rich repeat receptor-like protein kinase family protein
Chr5_-_21092410 0.65 AT5G51890.1
AT5G51890
Peroxidase superfamily protein
Chr4_-_8016582 0.65 AT4G13840.1
AT4G13840
HXXXD-type acyl-transferase family protein
Chr5_+_208866 0.65 AT5G01530.1
LHCB4.1
light harvesting complex photosystem II
Chr4_+_6100714 0.65 AT4G09650.1
ATPD
F-type H+-transporting ATPase subunit delta
Chr1_+_26983615 0.64 AT1G71720.1
AT1G71720.2
PDE338
Nucleic acid-binding proteins superfamily
Chr5_-_24661241 0.64 AT5G61330.1
AT5G61330.2
AT5G61330
rRNA processing protein-like protein
Chr2_-_11214662 0.64 AT2G26330.1
ER
Leucine-rich receptor-like protein kinase family protein
Chr3_+_17949416 0.63 AT3G48460.1
AT3G48460
GDSL-like Lipase/Acylhydrolase superfamily protein
Chr1_-_26515188 0.63 AT1G70370.2
AT1G70370.1
PG2
polygalacturonase 2
Chr1_+_218834 0.62 AT1G01600.1
CYP86A4
cytochrome P450, family 86, subfamily A, polypeptide 4
Chr1_-_18690503 0.62 AT1G50450.1
AT1G50450
Saccharopine dehydrogenase
Chr5_-_23406479 0.62 AT5G57780.1
P1R1
transcription factor
Chr2_+_15335284 0.62 AT2G36570.1
AT2G36570
Leucine-rich repeat protein kinase family protein
Chr1_-_8559066 0.61 AT1G24170.1
LGT9
Nucleotide-diphospho-sugar transferases superfamily protein
Chr2_+_10662190 0.61 AT2G25060.1
ENODL14
early nodulin-like protein 14
Chr5_-_7047446 0.61 AT5G20820.1
AT5G20820
SAUR-like auxin-responsive protein family
Chr5_+_15742543 0.61 AT5G39320.1
UDG4
UDP-glucose 6-dehydrogenase family protein
Chr5_+_1912013 0.61 AT5G06270.2
AT5G06270.1
AT5G06270
hypothetical protein
Chr4_+_17986384 0.60 AT4G38430.1
ROPGEF1
rho guanyl-nucleotide exchange factor 1
Chr3_-_5854906 0.60 AT3G17170.1
RFC3
Translation elongation factor EF1B/ribosomal protein S6 family protein
Chr4_+_12876822 0.60 AT4G25080.6
AT4G25080.5
AT4G25080.2
AT4G25080.1
AT4G25080.3
AT4G25080.4
CHLM
magnesium-protoporphyrin IX methyltransferase
Chr3_-_20142763 0.60 AT3G54400.1
AT3G54400
Eukaryotic aspartyl protease family protein
Chr1_-_25649254 0.59 AT1G68400.1
AT1G68400
leucine-rich repeat transmembrane protein kinase family protein
Chr4_-_18165740 0.59 AT4G38970.2
FBA2
fructose-bisphosphate aldolase 2
Chr3_+_11252807 0.59 AT3G29320.1
PHS1
Glycosyl transferase, family 35
Chr4_-_18166008 0.59 AT4G38970.1
FBA2
fructose-bisphosphate aldolase 2
Chr5_-_26129547 0.59 AT5G65390.1
AGP7
arabinogalactan protein 7
Chr1_+_20713499 0.59 AT1G55480.1
ZKT
protein containing PDZ domain, a K-box domain, and a TPR region
Chr3_+_21076505 0.58 AT3G56940.1
AT3G56940.2
CRD1
dicarboxylate diiron protein, putative (Crd1)
Chr3_-_9346424 0.58 AT3G25670.1
AT3G25670
Leucine-rich repeat (LRR) family protein
Chr5_-_7419335 0.58 AT5G22390.1
AT5G22390
FANTASTIC four-like protein (DUF3049)
Chr5_+_26261136 0.58 AT5G65683.1
WAVH2
Zinc finger (C3HC4-type RING finger) family protein
Chr5_-_3728726 0.58 AT5G11590.1
TINY2
Integrase-type DNA-binding superfamily protein
Chr1_-_6283348 0.58 AT1G18265.1
AT1G18265
zein-binding protein (Protein of unknown function, DUF593)
Chr1_-_23487091 0.58 AT1G63310.1
AT1G63310
hypothetical protein
Chr1_-_15607966 0.58 AT1G41830.1
SKS6
SKU5-similar 6
Chr2_-_8971339 0.57 AT2G20835.1
AT2G20835
hypothetical protein
Chr5_-_16061043 0.57 AT5G40150.1
AT5G40150
Peroxidase superfamily protein
Chr3_+_3301887 0.57 AT3G10570.1
CYP77A6
cytochrome P450, family 77, subfamily A, polypeptide 6
Chr5_-_345457 0.57 AT5G01890.1
AT5G01890
Leucine-rich receptor-like protein kinase family protein
Chr3_-_5252697 0.57 AT3G15520.1
AT3G15520.2
AT3G15520.3
AT3G15520
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
Chr2_-_7768040 0.57 AT2G17880.1
AT2G17880
Chaperone DnaJ-domain superfamily protein
Chr5_-_5833989 0.57 AT5G17700.2
AT5G17700.1
AT5G17700.3
AT5G17700
MATE efflux family protein
Chr4_-_14439723 0.57 AT4G29310.1
AT4G29310.2
AT4G29310
DUF1005 family protein (DUF1005)
Chr5_+_16768935 0.56 AT5G41900.1
AT5G41900
alpha/beta-Hydrolases superfamily protein
Chr4_+_12376122 0.56 AT4G23750.1
AT4G23750.2
CRF2
cytokinin response factor 2
Chr3_+_19417372 0.56 AT3G52370.2
AT3G52370.1
FLA15
FASCICLIN-like arabinogalactan protein 15 precursor
Chr2_-_14523568 0.56 AT2G34420.1
LHB1B2
photosystem II light harvesting complex protein B1B2
Chr4_+_17243583 0.56 AT4G36540.2
AT4G36540.1
BEE2
BR enhanced expression 2
Chr1_+_18351324 0.56 AT1G49580.1
AT1G49580
Calcium-dependent protein kinase (CDPK) family protein
Chr4_-_16806830 0.56 AT4G35320.1
AT4G35320
hypothetical protein
Chr3_+_20344785 0.55 AT3G54920.1
PMR6
Pectin lyase-like superfamily protein
Chr2_-_14716634 0.55 AT2G34880.1
MEE27
Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Chr4_-_13496738 0.55 AT4G26830.1
AT4G26830.2
AT4G26830
O-Glycosyl hydrolases family 17 protein
Chr3_+_22745514 0.55 AT3G61470.1
LHCA2
photosystem I light harvesting complex protein
Chr3_-_23417119 0.55 AT3G63410.1
APG1
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr5_+_18530834 0.55 AT5G45680.1
FKBP13
FK506-binding protein 13
Chr4_+_15185775 0.55 AT4G31290.1
AT4G31290
ChaC-like family protein
Chr1_+_23911024 0.55 AT1G64390.1
GH9C2
glycosyl hydrolase 9C2
Chr5_+_2212826 0.55 AT5G07140.1
AT5G07140
Protein kinase superfamily protein
Chr5_+_22538556 0.55 AT5G55660.1
AT5G55660
DEK domain-containing chromatin associated protein
Chr4_+_9780224 0.55 AT4G17560.1
AT4G17560
Ribosomal protein L19 family protein
Chr3_+_16569051 0.55 AT3G45230.1
AT3G45230
hydroxyproline-rich glycoprotein family protein
Chr5_-_18371021 0.55 AT5G45340.2
AT5G45340.1
CYP707A3
cytochrome P450, family 707, subfamily A, polypeptide 3
Chr4_+_11907355 0.55 AT4G22620.1
AT4G22620
SAUR-like auxin-responsive protein family
Chr3_-_3108266 0.55 AT3G10080.1
AT3G10080.2
AT3G10080
RmlC-like cupins superfamily protein
Chr5_+_1399395 0.55 AT5G04820.1
OFP13
ovate family protein 13
Chr3_-_2944457 0.55 AT3G09580.1
AT3G09580
FAD/NAD(P)-binding oxidoreductase family protein
Chr3_-_1855063 0.55 AT3G06130.2
AT3G06130.1
AT3G06130
Heavy metal transport/detoxification superfamily protein
Chr5_+_7778017 0.55 AT5G23120.2
AT5G23120.1
HCF136
photosystem II stability/assembly factor, chloroplast (HCF136)
Chr3_-_7066729 0.54 AT3G20260.1
AT3G20260
DUF1666 family protein (DUF1666)
Chr5_+_834859 0.54 AT5G03390.1
AT5G03390
hypothetical protein (DUF295)
Chr1_+_23953099 0.54 AT1G64500.1
AT1G64500
Glutaredoxin family protein
Chr1_+_28078852 0.54 AT1G74730.1
AT1G74730
transmembrane protein, putative (DUF1118)
Chr5_+_24667873 0.54 AT5G61350.1
AT5G61350
Protein kinase superfamily protein
Chr2_+_15445294 0.54 AT2G36830.1
GAMMA-TIP
gamma tonoplast intrinsic protein
Chr1_-_624567 0.54 AT1G02820.1
LEA3
Late embryogenesis abundant 3 (LEA3) family protein
Chr1_+_23144385 0.54 AT1G62520.1
AT1G62520
sulfated surface-like glycoprotein
Chr1_-_4217412 0.53 AT1G12380.1
AT1G12380
hypothetical protein
Chr1_-_28581315 0.53 AT1G76160.1
sks5
SKU5 similar 5
Chr5_+_24494291 0.53 AT5G60890.1
MYB34
myb domain protein 34
Chr2_+_19109513 0.53 AT2G46535.1
AT2G46535
hypothetical protein
Chr5_-_4582856 0.53 AT5G14210.1
AT5G14210.2
AT5G14210.3
AT5G14210
Leucine-rich repeat protein kinase family protein
Chr1_+_26439556 0.52 AT1G70210.1
CYCD1%3B1
CYCLIN D1;1
Chr3_-_2130451 0.52 AT3G06750.1
AT3G06750
hydroxyproline-rich glycoprotein family protein
Chr1_+_9259750 0.52 AT1G26770.2
EXPA10
expansin A10
Chr1_+_3901950 0.52 AT1G11600.1
CYP77B1
cytochrome P450, family 77, subfamily B, polypeptide 1
Chr2_+_12000239 0.52 AT2G28150.2
AT2G28150.3
AT2G28150
UPSTREAM OF FLC protein (DUF966)

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G25490

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.0 GO:0015840 urea transport(GO:0015840)
0.3 2.3 GO:0043489 RNA stabilization(GO:0043489)
0.3 1.8 GO:0043446 cellular alkane metabolic process(GO:0043446)
0.2 4.4 GO:0030388 fructose 1,6-bisphosphate metabolic process(GO:0030388)
0.2 0.7 GO:0080051 cutin transport(GO:0080051)
0.2 1.0 GO:0046498 S-adenosylmethionine cycle(GO:0033353) S-adenosylhomocysteine metabolic process(GO:0046498)
0.2 4.4 GO:0006949 syncytium formation(GO:0006949)
0.2 0.6 GO:0007000 nucleolus organization(GO:0007000)
0.2 1.0 GO:0010226 response to lithium ion(GO:0010226)
0.2 1.3 GO:0009772 photosynthetic electron transport in photosystem II(GO:0009772)
0.2 1.0 GO:0010236 plastoquinone biosynthetic process(GO:0010236)
0.2 1.0 GO:0009650 UV protection(GO:0009650)
0.2 0.5 GO:0080170 hydrogen peroxide transmembrane transport(GO:0080170)
0.2 1.0 GO:0042547 cell wall modification involved in multidimensional cell growth(GO:0042547)
0.2 0.5 GO:0051341 regulation of oxidoreductase activity(GO:0051341)
0.2 0.5 GO:0010220 positive regulation of vernalization response(GO:0010220)
0.2 0.6 GO:0006024 aminoglycan biosynthetic process(GO:0006023) glycosaminoglycan biosynthetic process(GO:0006024) UDP-glucuronate biosynthetic process(GO:0006065) glycosaminoglycan metabolic process(GO:0030203)
0.1 0.7 GO:0051098 regulation of binding(GO:0051098)
0.1 0.4 GO:0042817 pyridoxal metabolic process(GO:0042817)
0.1 0.7 GO:0005980 glycogen catabolic process(GO:0005980)
0.1 0.7 GO:0042549 photosystem II stabilization(GO:0042549)
0.1 0.4 GO:0070829 heterochromatin maintenance(GO:0070829) regulation of histone H4 acetylation(GO:0090239)
0.1 0.9 GO:0045038 protein import into chloroplast thylakoid membrane(GO:0045038)
0.1 0.7 GO:0010086 embryonic root morphogenesis(GO:0010086)
0.1 0.4 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.1 0.9 GO:0010438 cellular response to sulfur starvation(GO:0010438)
0.1 0.6 GO:0008615 pyridoxine biosynthetic process(GO:0008615)
0.1 0.4 GO:0010192 mucilage biosynthetic process(GO:0010192)
0.1 1.0 GO:0010239 chloroplast mRNA processing(GO:0010239)
0.1 0.5 GO:0015714 phosphoenolpyruvate transport(GO:0015714)
0.1 0.3 GO:0046156 siroheme biosynthetic process(GO:0019354) siroheme metabolic process(GO:0046156)
0.1 1.2 GO:0010206 photosystem II repair(GO:0010206)
0.1 0.4 GO:0098609 pollen tube adhesion(GO:0009865) cell-cell adhesion(GO:0098609) multi organism cell adhesion(GO:0098740)
0.1 0.7 GO:0043478 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.1 0.6 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.1 0.4 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.1 0.4 GO:0044380 protein localization to cytoskeleton(GO:0044380) protein localization to microtubule cytoskeleton(GO:0072698)
0.1 0.1 GO:0071281 cellular response to iron ion(GO:0071281)
0.1 1.0 GO:2000779 regulation of double-strand break repair(GO:2000779)
0.1 0.7 GO:0010067 procambium histogenesis(GO:0010067)
0.1 0.4 GO:0055073 cadmium ion homeostasis(GO:0055073)
0.1 0.4 GO:0019586 uronic acid metabolic process(GO:0006063) galacturonate metabolic process(GO:0019586)
0.1 0.5 GO:0051016 barbed-end actin filament capping(GO:0051016)
0.1 2.3 GO:0009768 photosynthesis, light harvesting in photosystem I(GO:0009768)
0.1 0.1 GO:0000301 retrograde transport, vesicle recycling within Golgi(GO:0000301)
0.1 0.6 GO:0010148 transpiration(GO:0010148)
0.1 0.3 GO:0042407 mitochondrial protein processing(GO:0034982) cristae formation(GO:0042407)
0.1 0.3 GO:0045876 positive regulation of sister chromatid cohesion(GO:0045876)
0.1 5.6 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.1 0.4 GO:0045922 negative regulation of fatty acid metabolic process(GO:0045922)
0.1 1.2 GO:0009554 megasporogenesis(GO:0009554)
0.1 1.5 GO:0042761 very long-chain fatty acid biosynthetic process(GO:0042761)
0.1 0.8 GO:0033206 meiotic cytokinesis(GO:0033206)
0.1 0.5 GO:0006013 mannose metabolic process(GO:0006013)
0.1 0.8 GO:0010371 regulation of gibberellin biosynthetic process(GO:0010371)
0.1 0.2 GO:0009915 phloem sucrose loading(GO:0009915)
0.1 0.5 GO:0010047 fruit dehiscence(GO:0010047)
0.1 0.5 GO:0000212 meiotic spindle organization(GO:0000212)
0.1 0.2 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.1 1.0 GO:0010158 abaxial cell fate specification(GO:0010158)
0.1 0.2 GO:0046825 regulation of protein export from nucleus(GO:0046825)
0.1 0.4 GO:0035864 response to potassium ion(GO:0035864)
0.1 0.9 GO:0006526 arginine biosynthetic process(GO:0006526)
0.1 0.9 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.1 0.2 GO:0001736 establishment of planar polarity(GO:0001736) morphogenesis of a polarized epithelium(GO:0001738) morphogenesis of an epithelium(GO:0002009) tissue morphogenesis(GO:0048729)
0.1 0.4 GO:0006556 S-adenosylmethionine biosynthetic process(GO:0006556)
0.1 0.5 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.1 0.4 GO:0002679 respiratory burst involved in defense response(GO:0002679) respiratory burst(GO:0045730)
0.1 0.4 GO:0097502 mannosylation(GO:0097502)
0.1 0.3 GO:0070206 protein trimerization(GO:0070206)
0.1 0.2 GO:0031120 snRNA pseudouridine synthesis(GO:0031120)
0.1 0.4 GO:0046949 fatty-acyl-CoA biosynthetic process(GO:0046949)
0.1 0.2 GO:0006057 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506) response to cobalt ion(GO:0032025)
0.1 0.9 GO:0010315 auxin efflux(GO:0010315)
0.1 0.4 GO:0009800 cinnamic acid biosynthetic process(GO:0009800)
0.1 0.2 GO:1902448 regulation of shade avoidance(GO:1902446) positive regulation of shade avoidance(GO:1902448)
0.1 5.4 GO:0009834 plant-type secondary cell wall biogenesis(GO:0009834)
0.1 0.3 GO:0099636 cytoplasmic streaming(GO:0099636)
0.1 0.2 GO:0046102 inosine catabolic process(GO:0006148) inosine metabolic process(GO:0046102)
0.1 0.4 GO:0015909 long-chain fatty acid transport(GO:0015909)
0.1 0.8 GO:0032544 plastid translation(GO:0032544)
0.1 5.4 GO:0045490 pectin catabolic process(GO:0045490)
0.1 0.2 GO:0036292 DNA rewinding(GO:0036292)
0.1 0.6 GO:0046083 adenine metabolic process(GO:0046083) adenine biosynthetic process(GO:0046084)
0.1 1.4 GO:0043572 chloroplast fission(GO:0010020) plastid fission(GO:0043572)
0.1 0.3 GO:0019408 dolichol biosynthetic process(GO:0019408)
0.1 1.3 GO:0009828 plant-type cell wall loosening(GO:0009828)
0.1 0.2 GO:0007349 cellularization(GO:0007349)
0.1 0.8 GO:0048564 photosystem I assembly(GO:0048564)
0.1 0.2 GO:2000039 regulation of trichome morphogenesis(GO:2000039)
0.1 0.4 GO:1902969 mitotic DNA replication(GO:1902969)
0.1 0.2 GO:0002698 negative regulation of immune effector process(GO:0002698) negative regulation of defense response to virus(GO:0050687)
0.1 0.2 GO:0071431 tRNA export from nucleus(GO:0006409) tRNA transport(GO:0051031) tRNA-containing ribonucleoprotein complex export from nucleus(GO:0071431)
0.1 1.6 GO:0010025 wax biosynthetic process(GO:0010025)
0.1 0.5 GO:0006549 isoleucine metabolic process(GO:0006549) isoleucine biosynthetic process(GO:0009097)
0.1 0.8 GO:0006782 protoporphyrinogen IX biosynthetic process(GO:0006782) protoporphyrinogen IX metabolic process(GO:0046501)
0.1 0.3 GO:0033385 geranylgeranyl diphosphate metabolic process(GO:0033385) geranylgeranyl diphosphate biosynthetic process(GO:0033386)
0.1 0.2 GO:0009660 amyloplast organization(GO:0009660)
0.1 0.7 GO:0010052 guard cell differentiation(GO:0010052)
0.1 0.2 GO:0010184 cytokinin transport(GO:0010184)
0.1 0.2 GO:0006097 glyoxylate cycle(GO:0006097)
0.1 0.2 GO:0008153 para-aminobenzoic acid biosynthetic process(GO:0008153)
0.1 0.3 GO:0031930 mitochondria-nucleus signaling pathway(GO:0031930)
0.1 1.0 GO:0030488 tRNA methylation(GO:0030488)
0.1 0.8 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.0 0.4 GO:0031542 positive regulation of anthocyanin biosynthetic process(GO:0031542)
0.0 0.3 GO:0006021 inositol biosynthetic process(GO:0006021)
0.0 0.4 GO:0046294 formaldehyde catabolic process(GO:0046294)
0.0 0.3 GO:0010929 positive regulation of auxin mediated signaling pathway(GO:0010929)
0.0 0.3 GO:0048871 multicellular organismal homeostasis(GO:0048871)
0.0 0.7 GO:0048497 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.0 1.0 GO:0007140 male meiosis(GO:0007140)
0.0 0.1 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.0 0.6 GO:2000104 negative regulation of DNA-dependent DNA replication(GO:2000104)
0.0 0.4 GO:0009854 oxidative photosynthetic carbon pathway(GO:0009854)
0.0 0.6 GO:0042753 positive regulation of circadian rhythm(GO:0042753)
0.0 0.1 GO:0051639 actin filament network formation(GO:0051639)
0.0 0.2 GO:1905157 positive regulation of photosynthesis(GO:1905157)
0.0 0.6 GO:0035999 tetrahydrofolate interconversion(GO:0035999)
0.0 1.3 GO:0006284 base-excision repair(GO:0006284)
0.0 0.3 GO:0015969 guanosine tetraphosphate metabolic process(GO:0015969) purine ribonucleoside bisphosphate metabolic process(GO:0034035)
0.0 0.3 GO:0043155 photoinhibition(GO:0010205) negative regulation of photosynthesis, light reaction(GO:0043155)
0.0 0.2 GO:0032011 ARF protein signal transduction(GO:0032011) regulation of ARF protein signal transduction(GO:0032012)
0.0 0.3 GO:0046683 response to organophosphorus(GO:0046683)
0.0 2.8 GO:0007018 microtubule-based movement(GO:0007018)
0.0 0.1 GO:0009805 coumarin biosynthetic process(GO:0009805)
0.0 0.5 GO:0009954 proximal/distal pattern formation(GO:0009954)
0.0 0.1 GO:2001293 malonyl-CoA metabolic process(GO:2001293)
0.0 0.1 GO:0034502 protein localization to chromosome(GO:0034502)
0.0 0.8 GO:0055070 copper ion homeostasis(GO:0055070)
0.0 0.9 GO:0045037 protein import into chloroplast stroma(GO:0045037)
0.0 1.3 GO:0009664 plant-type cell wall organization(GO:0009664)
0.0 0.4 GO:2000816 mitotic spindle assembly checkpoint(GO:0007094) spindle checkpoint(GO:0031577) negative regulation of proteasomal ubiquitin-dependent protein catabolic process(GO:0032435) negative regulation of sister chromatid segregation(GO:0033046) negative regulation of mitotic sister chromatid segregation(GO:0033048) negative regulation of mitotic metaphase/anaphase transition(GO:0045841) negative regulation of chromosome segregation(GO:0051985) spindle assembly checkpoint(GO:0071173) mitotic spindle checkpoint(GO:0071174) negative regulation of proteasomal protein catabolic process(GO:1901799) negative regulation of metaphase/anaphase transition of cell cycle(GO:1902100) negative regulation of proteolysis involved in cellular protein catabolic process(GO:1903051) negative regulation of cellular protein catabolic process(GO:1903363) negative regulation of mitotic sister chromatid separation(GO:2000816)
0.0 0.7 GO:0048826 cotyledon morphogenesis(GO:0048826)
0.0 0.4 GO:0007076 mitotic chromosome condensation(GO:0007076)
0.0 0.2 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.0 0.5 GO:0005987 sucrose catabolic process(GO:0005987)
0.0 0.7 GO:0000373 Group II intron splicing(GO:0000373)
0.0 0.1 GO:0046168 glycerol-3-phosphate catabolic process(GO:0046168)
0.0 0.2 GO:0006048 UDP-N-acetylglucosamine biosynthetic process(GO:0006048)
0.0 0.4 GO:0072583 clathrin-mediated endocytosis(GO:0072583)
0.0 0.1 GO:0016560 protein import into peroxisome matrix, docking(GO:0016560) protein to membrane docking(GO:0022615)
0.0 0.0 GO:0033478 UDP-rhamnose biosynthetic process(GO:0010253) UDP-rhamnose metabolic process(GO:0033478)
0.0 1.1 GO:0000741 karyogamy(GO:0000741) polar nucleus fusion(GO:0010197)
0.0 0.2 GO:0051513 regulation of monopolar cell growth(GO:0051513)
0.0 0.2 GO:0006449 regulation of translational termination(GO:0006449)
0.0 0.1 GO:0010338 leaf formation(GO:0010338)
0.0 0.2 GO:0007043 cell-cell junction assembly(GO:0007043) cell junction assembly(GO:0034329)
0.0 0.3 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.0 0.2 GO:0090356 negative regulation of auxin metabolic process(GO:0090356)
0.0 1.0 GO:0007129 synapsis(GO:0007129)
0.0 0.2 GO:0010117 photoprotection(GO:0010117)
0.0 0.6 GO:0006743 ubiquinone metabolic process(GO:0006743) ubiquinone biosynthetic process(GO:0006744)
0.0 0.4 GO:0009641 shade avoidance(GO:0009641)
0.0 0.2 GO:0090057 root radial pattern formation(GO:0090057)
0.0 1.0 GO:0005992 trehalose biosynthetic process(GO:0005992)
0.0 1.9 GO:0007267 cell-cell signaling(GO:0007267)
0.0 0.2 GO:0071323 cellular response to chitin(GO:0071323)
0.0 0.1 GO:1903321 negative regulation of protein modification by small protein conjugation or removal(GO:1903321)
0.0 0.6 GO:0010305 leaf vascular tissue pattern formation(GO:0010305)
0.0 0.5 GO:0052803 histidine biosynthetic process(GO:0000105) histidine metabolic process(GO:0006547) imidazole-containing compound metabolic process(GO:0052803)
0.0 0.5 GO:0019853 L-ascorbic acid metabolic process(GO:0019852) L-ascorbic acid biosynthetic process(GO:0019853)
0.0 0.2 GO:0007023 post-chaperonin tubulin folding pathway(GO:0007023)
0.0 0.4 GO:0006384 transcription initiation from RNA polymerase III promoter(GO:0006384)
0.0 0.4 GO:0042793 transcription from plastid promoter(GO:0042793)
0.0 0.5 GO:0080188 RNA-directed DNA methylation(GO:0080188)
0.0 0.3 GO:0009231 riboflavin metabolic process(GO:0006771) riboflavin biosynthetic process(GO:0009231)
0.0 0.2 GO:0006011 UDP-glucose metabolic process(GO:0006011)
0.0 0.2 GO:0048640 negative regulation of organ growth(GO:0046621) negative regulation of developmental growth(GO:0048640)
0.0 0.1 GO:0090646 mitochondrial tRNA processing(GO:0090646)
0.0 0.4 GO:0010109 regulation of photosynthesis(GO:0010109)
0.0 0.2 GO:0009090 homoserine biosynthetic process(GO:0009090)
0.0 0.3 GO:0006662 glycerol ether metabolic process(GO:0006662)
0.0 0.3 GO:0009635 response to herbicide(GO:0009635) cellular response to hydrogen peroxide(GO:0070301)
0.0 0.2 GO:0042344 indole glucosinolate catabolic process(GO:0042344)
0.0 0.1 GO:0010358 leaf shaping(GO:0010358)
0.0 0.9 GO:0015979 photosynthesis(GO:0015979)
0.0 0.2 GO:0009187 cyclic nucleotide metabolic process(GO:0009187)
0.0 0.3 GO:0031425 chloroplast RNA processing(GO:0031425)
0.0 0.2 GO:0006216 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.0 0.2 GO:0044038 cell wall macromolecule biosynthetic process(GO:0044038) cellular component macromolecule biosynthetic process(GO:0070589)
0.0 0.4 GO:0072596 protein targeting to chloroplast(GO:0045036) establishment of protein localization to chloroplast(GO:0072596)
0.0 0.1 GO:0007032 endosome organization(GO:0007032) SNARE complex assembly(GO:0035493)
0.0 0.1 GO:0043953 protein transport by the Tat complex(GO:0043953)
0.0 0.2 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.0 0.3 GO:0030307 positive regulation of cell growth(GO:0030307)
0.0 0.7 GO:0030050 vesicle transport along actin filament(GO:0030050) vesicle cytoskeletal trafficking(GO:0099518)
0.0 0.6 GO:0009294 genetic transfer(GO:0009292) DNA mediated transformation(GO:0009294)
0.0 0.1 GO:0009559 embryo sac central cell differentiation(GO:0009559)
0.0 2.7 GO:0080167 response to karrikin(GO:0080167)
0.0 0.1 GO:0071329 cellular response to sucrose stimulus(GO:0071329)
0.0 0.4 GO:0010274 hydrotropism(GO:0010274)
0.0 0.0 GO:0043181 vacuolar sequestering(GO:0043181)
0.0 0.1 GO:0080168 abscisic acid transport(GO:0080168)
0.0 0.6 GO:0010584 pollen exine formation(GO:0010584)
0.0 0.6 GO:0010187 negative regulation of seed germination(GO:0010187)
0.0 0.3 GO:0010215 cellulose microfibril organization(GO:0010215)
0.0 0.6 GO:0043622 cortical microtubule organization(GO:0043622)
0.0 1.0 GO:0045489 pectin biosynthetic process(GO:0045489)
0.0 0.2 GO:0071585 detoxification of cadmium ion(GO:0071585)
0.0 1.4 GO:0009566 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.0 0.1 GO:0044208 'de novo' AMP biosynthetic process(GO:0044208)
0.0 0.1 GO:1901703 protein localization involved in auxin polar transport(GO:1901703)
0.0 0.3 GO:0006353 DNA-templated transcription, termination(GO:0006353)
0.0 0.2 GO:0010380 regulation of chlorophyll biosynthetic process(GO:0010380) regulation of tetrapyrrole biosynthetic process(GO:1901463)
0.0 0.1 GO:1990882 rRNA acetylation involved in maturation of SSU-rRNA(GO:1904812) rRNA acetylation(GO:1990882) RNA acetylation(GO:1990884)
0.0 0.3 GO:0010207 photosystem II assembly(GO:0010207)
0.0 0.3 GO:0051762 sesquiterpene biosynthetic process(GO:0051762)
0.0 0.3 GO:0051782 negative regulation of cell division(GO:0051782)
0.0 0.9 GO:0019684 photosynthesis, light reaction(GO:0019684)
0.0 0.2 GO:0015977 carbon fixation(GO:0015977) reductive pentose-phosphate cycle(GO:0019253)
0.0 0.6 GO:0019915 lipid storage(GO:0019915)
0.0 0.2 GO:0009944 polarity specification of adaxial/abaxial axis(GO:0009944) specification of axis polarity(GO:0065001)
0.0 0.1 GO:0034315 regulation of Arp2/3 complex-mediated actin nucleation(GO:0034315) regulation of actin nucleation(GO:0051125) positive regulation of actin nucleation(GO:0051127) positive regulation of Arp2/3 complex-mediated actin nucleation(GO:2000601)
0.0 0.2 GO:0048575 short-day photoperiodism(GO:0048572) short-day photoperiodism, flowering(GO:0048575)
0.0 0.3 GO:0045338 farnesyl diphosphate metabolic process(GO:0045338)
0.0 0.4 GO:0005983 starch catabolic process(GO:0005983)
0.0 0.1 GO:0080187 floral organ senescence(GO:0080187)
0.0 0.2 GO:1902533 positive regulation of intracellular signal transduction(GO:1902533)
0.0 0.4 GO:0000162 tryptophan biosynthetic process(GO:0000162) indolalkylamine biosynthetic process(GO:0046219)
0.0 0.6 GO:0019750 chloroplast relocation(GO:0009902) chloroplast localization(GO:0019750) plastid localization(GO:0051644) establishment of plastid localization(GO:0051667)
0.0 0.0 GO:1902458 positive regulation of stomatal opening(GO:1902458)
0.0 0.5 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.1 GO:0042908 xenobiotic transport(GO:0042908)
0.0 0.5 GO:0010582 floral meristem determinacy(GO:0010582)
0.0 0.4 GO:0030148 sphingolipid biosynthetic process(GO:0030148)
0.0 0.2 GO:0032875 regulation of DNA endoreduplication(GO:0032875)
0.0 0.3 GO:0001678 cellular glucose homeostasis(GO:0001678)
0.0 0.1 GO:0010304 PSII associated light-harvesting complex II catabolic process(GO:0010304)
0.0 0.4 GO:0051225 spindle assembly(GO:0051225)
0.0 0.3 GO:0009934 regulation of meristem structural organization(GO:0009934)
0.0 0.1 GO:0019365 pyridine nucleotide salvage(GO:0019365)
0.0 0.1 GO:0051204 protein insertion into membrane from inner side(GO:0032978) protein insertion into mitochondrial membrane from inner side(GO:0032979) protein insertion into mitochondrial membrane(GO:0051204)
0.0 0.1 GO:0000395 mRNA 5'-splice site recognition(GO:0000395)
0.0 0.1 GO:0048451 petal formation(GO:0048451)
0.0 0.1 GO:0006434 seryl-tRNA aminoacylation(GO:0006434) selenocysteinyl-tRNA(Sec) biosynthetic process(GO:0097056)
0.0 0.2 GO:0001934 positive regulation of protein phosphorylation(GO:0001934)
0.0 0.3 GO:0061157 RNA destabilization(GO:0050779) mRNA destabilization(GO:0061157)
0.0 0.1 GO:0010115 regulation of abscisic acid biosynthetic process(GO:0010115)
0.0 0.7 GO:0010311 lateral root formation(GO:0010311)
0.0 0.1 GO:0033619 membrane protein proteolysis(GO:0033619)
0.0 0.0 GO:0080190 secondary growth(GO:0080117) lateral growth(GO:0080190)
0.0 0.2 GO:0019511 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.0 0.2 GO:0010928 regulation of auxin mediated signaling pathway(GO:0010928)
0.0 0.2 GO:0007584 response to nutrient(GO:0007584)
0.0 0.1 GO:0006123 mitochondrial electron transport, cytochrome c to oxygen(GO:0006123)
0.0 0.1 GO:0010424 DNA methylation on cytosine within a CG sequence(GO:0010424)
0.0 0.5 GO:0046916 cellular transition metal ion homeostasis(GO:0046916)
0.0 0.3 GO:0007062 sister chromatid cohesion(GO:0007062)
0.0 0.1 GO:1901259 chloroplast rRNA processing(GO:1901259)
0.0 0.1 GO:0048830 adventitious root development(GO:0048830)
0.0 0.2 GO:2000032 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.0 0.1 GO:0048579 negative regulation of long-day photoperiodism, flowering(GO:0048579)
0.0 0.1 GO:0009920 cell plate formation involved in plant-type cell wall biogenesis(GO:0009920)
0.0 0.3 GO:0048825 cotyledon development(GO:0048825)
0.0 0.8 GO:0009736 cytokinin-activated signaling pathway(GO:0009736)
0.0 0.8 GO:0002181 cytoplasmic translation(GO:0002181)
0.0 0.3 GO:0008284 positive regulation of cell proliferation(GO:0008284)
0.0 0.2 GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain(GO:0070940)
0.0 0.1 GO:0032988 ribonucleoprotein complex disassembly(GO:0032988)
0.0 0.1 GO:0009955 adaxial/abaxial pattern specification(GO:0009955)
0.0 0.1 GO:0052548 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.0 0.3 GO:0003333 amino acid transmembrane transport(GO:0003333)
0.0 0.1 GO:0005978 glycogen biosynthetic process(GO:0005978)
0.0 0.1 GO:0048598 embryonic morphogenesis(GO:0048598)
0.0 0.0 GO:0072501 cellular phosphate ion homeostasis(GO:0030643) cellular divalent inorganic anion homeostasis(GO:0072501) cellular trivalent inorganic anion homeostasis(GO:0072502)
0.0 0.1 GO:0010449 root meristem growth(GO:0010449)
0.0 0.1 GO:0015919 peroxisomal membrane transport(GO:0015919)
0.0 0.2 GO:0009959 negative gravitropism(GO:0009959)
0.0 0.1 GO:0031540 regulation of anthocyanin biosynthetic process(GO:0031540)
0.0 0.2 GO:0080022 primary root development(GO:0080022)
0.0 0.3 GO:0016126 sterol biosynthetic process(GO:0016126)
0.0 0.1 GO:0070475 rRNA base methylation(GO:0070475)
0.0 0.1 GO:0009704 de-etiolation(GO:0009704)
0.0 0.2 GO:0006282 regulation of DNA repair(GO:0006282)
0.0 0.1 GO:0001709 cell fate determination(GO:0001709)
0.0 0.3 GO:0006661 phosphatidylinositol biosynthetic process(GO:0006661)
0.0 0.0 GO:0042724 thiamine biosynthetic process(GO:0009228) thiamine-containing compound biosynthetic process(GO:0042724)
0.0 0.0 GO:0010070 zygote asymmetric cell division(GO:0010070)
0.0 0.2 GO:0006268 DNA unwinding involved in DNA replication(GO:0006268)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 0.3 GO:0016328 lateral plasma membrane(GO:0016328)
0.2 0.7 GO:0009509 chromoplast(GO:0009509)
0.2 0.8 GO:0009897 external side of plasma membrane(GO:0009897)
0.2 0.5 GO:0043668 pollen wall(GO:0043667) exine(GO:0043668) sexine(GO:0043673) columella(GO:0043674)
0.1 1.2 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.1 0.4 GO:1990752 microtubule end(GO:1990752)
0.1 5.1 GO:0009543 chloroplast thylakoid lumen(GO:0009543) plastid thylakoid lumen(GO:0031978)
0.1 2.5 GO:0016324 apical plasma membrane(GO:0016324)
0.1 1.9 GO:0031977 thylakoid lumen(GO:0031977)
0.1 0.5 GO:0043036 chloroplast starch grain(GO:0009569) starch grain(GO:0043036)
0.1 0.5 GO:0009346 citrate lyase complex(GO:0009346)
0.1 0.5 GO:0005828 kinetochore microtubule(GO:0005828)
0.1 0.4 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.1 11.3 GO:0046658 anchored component of plasma membrane(GO:0046658)
0.1 0.5 GO:0030139 endocytic vesicle(GO:0030139)
0.1 0.5 GO:0005697 telomerase holoenzyme complex(GO:0005697)
0.1 0.7 GO:0098807 chloroplast thylakoid membrane protein complex(GO:0098807)
0.1 3.3 GO:0010287 plastoglobule(GO:0010287)
0.1 0.3 GO:0010007 magnesium chelatase complex(GO:0010007)
0.1 0.9 GO:0009522 photosystem I(GO:0009522)
0.1 0.2 GO:0044614 nuclear pore cytoplasmic filaments(GO:0044614)
0.1 0.4 GO:0009654 photosystem II oxygen evolving complex(GO:0009654)
0.1 0.5 GO:0016272 prefoldin complex(GO:0016272)
0.1 1.3 GO:0005871 kinesin complex(GO:0005871)
0.0 0.4 GO:0005884 actin filament(GO:0005884)
0.0 0.6 GO:0000795 synaptonemal complex(GO:0000795)
0.0 0.1 GO:0030896 checkpoint clamp complex(GO:0030896)
0.0 0.9 GO:0009508 plastid chromosome(GO:0009508)
0.0 0.1 GO:0016323 basal plasma membrane(GO:0009925) basolateral plasma membrane(GO:0016323) basal part of cell(GO:0045178)
0.0 0.2 GO:0005672 transcription factor TFIIA complex(GO:0005672)
0.0 0.3 GO:0032153 cell division site(GO:0032153)
0.0 0.5 GO:0005880 nuclear microtubule(GO:0005880)
0.0 2.2 GO:0009528 plastid inner membrane(GO:0009528)
0.0 0.6 GO:0009531 secondary cell wall(GO:0009531)
0.0 0.8 GO:0042644 chloroplast nucleoid(GO:0042644)
0.0 0.2 GO:0033063 Rad51B-Rad51C-Rad51D-XRCC2 complex(GO:0033063)
0.0 0.5 GO:0048500 signal recognition particle(GO:0048500)
0.0 0.3 GO:0005663 DNA replication factor C complex(GO:0005663)
0.0 0.4 GO:0009986 cell surface(GO:0009986)
0.0 2.4 GO:0099512 supramolecular fiber(GO:0099512) polymeric cytoskeletal fiber(GO:0099513)
0.0 0.1 GO:0009331 glycerol-3-phosphate dehydrogenase complex(GO:0009331)
0.0 0.4 GO:0032588 trans-Golgi network membrane(GO:0032588)
0.0 0.1 GO:0031907 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.0 7.7 GO:0048046 apoplast(GO:0048046)
0.0 3.3 GO:0031225 anchored component of membrane(GO:0031225)
0.0 4.0 GO:0009505 plant-type cell wall(GO:0009505)
0.0 0.1 GO:0031209 SCAR complex(GO:0031209)
0.0 0.1 GO:0070505 pollen coat(GO:0070505)
0.0 0.1 GO:1990429 Pex17p-Pex14p docking complex(GO:1990415) peroxisomal importomer complex(GO:1990429)
0.0 5.6 GO:0009534 chloroplast thylakoid(GO:0009534)
0.0 0.8 GO:0009579 thylakoid(GO:0009579)
0.0 0.1 GO:0000778 condensed chromosome kinetochore(GO:0000777) condensed nuclear chromosome kinetochore(GO:0000778) condensed nuclear chromosome, centromeric region(GO:0000780)
0.0 0.3 GO:0000347 THO complex(GO:0000347)
0.0 0.4 GO:0005875 microtubule associated complex(GO:0005875)
0.0 0.1 GO:0071556 integral component of lumenal side of endoplasmic reticulum membrane(GO:0071556) lumenal side of endoplasmic reticulum membrane(GO:0098553) lumenal side of membrane(GO:0098576)
0.0 0.1 GO:0033263 CORVET complex(GO:0033263)
0.0 0.1 GO:0035102 PRC1 complex(GO:0035102)
0.0 0.7 GO:0009707 chloroplast outer membrane(GO:0009707)
0.0 2.2 GO:0015934 large ribosomal subunit(GO:0015934)
0.0 0.2 GO:0000815 ESCRT III complex(GO:0000815)
0.0 0.6 GO:0005797 Golgi medial cisterna(GO:0005797)
0.0 0.2 GO:0000786 nucleosome(GO:0000786)
0.0 0.1 GO:0032300 mismatch repair complex(GO:0032300)
0.0 4.3 GO:0009570 chloroplast stroma(GO:0009570)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.7 2.0 GO:0015204 urea transmembrane transporter activity(GO:0015204)
0.5 1.5 GO:1990465 octadecanal decarbonylase activity(GO:0009924) aldehyde decarbonylase activity(GO:0071771) aldehyde oxygenase (deformylating) activity(GO:1990465)
0.3 1.4 GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen(GO:0016712) aromatase activity(GO:0070330)
0.3 1.0 GO:0004013 adenosylhomocysteinase activity(GO:0004013) trialkylsulfonium hydrolase activity(GO:0016802)
0.3 4.4 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.2 0.7 GO:0036381 pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity(GO:0036381)
0.2 0.7 GO:0045485 omega-6 fatty acid desaturase activity(GO:0045485)
0.2 0.4 GO:0051753 beta-1,4-mannosyltransferase activity(GO:0019187) mannan synthase activity(GO:0051753)
0.2 0.6 GO:0016618 hydroxypyruvate reductase activity(GO:0016618)
0.2 1.0 GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity(GO:0008835)
0.2 0.4 GO:0016801 hydrolase activity, acting on ether bonds(GO:0016801)
0.2 0.8 GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives(GO:0016856)
0.2 1.1 GO:0016984 ribulose-bisphosphate carboxylase activity(GO:0016984)
0.2 0.7 GO:0009784 transmembrane receptor histidine kinase activity(GO:0009784) transmembrane histidine kinase cytokinin receptor activity(GO:0009885)
0.2 0.5 GO:0003838 sterol 24-C-methyltransferase activity(GO:0003838)
0.1 0.7 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.1 4.3 GO:0008266 poly(U) RNA binding(GO:0008266)
0.1 4.3 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.1 0.5 GO:0015245 fatty acid transporter activity(GO:0015245)
0.1 0.4 GO:0003959 NADPH dehydrogenase activity(GO:0003959)
0.1 0.4 GO:0043140 ATP-dependent 3'-5' DNA helicase activity(GO:0043140) single-stranded DNA-dependent ATP-dependent 3'-5' DNA helicase activity(GO:1990518)
0.1 0.6 GO:0003979 UDP-glucose 6-dehydrogenase activity(GO:0003979)
0.1 0.4 GO:0045430 chalcone isomerase activity(GO:0045430)
0.1 0.5 GO:0052924 trans-octaprenyltranstransferase activity(GO:0050347) all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity(GO:0052924)
0.1 0.8 GO:0008169 C-methyltransferase activity(GO:0008169)
0.1 0.2 GO:0004359 glutaminase activity(GO:0004359)
0.1 0.5 GO:0046577 long-chain-alcohol oxidase activity(GO:0046577)
0.1 0.4 GO:0045548 phenylalanine ammonia-lyase activity(GO:0045548)
0.1 0.2 GO:0016841 ammonia-lyase activity(GO:0016841)
0.1 1.0 GO:0008725 alkylbase DNA N-glycosylase activity(GO:0003905) DNA-3-methyladenine glycosylase activity(GO:0008725) DNA-3-methylbase glycosylase activity(GO:0043733)
0.1 1.8 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 0.5 GO:0003878 ATP citrate synthase activity(GO:0003878)
0.1 2.3 GO:0016168 chlorophyll binding(GO:0016168)
0.1 2.2 GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides(GO:0016837) pectate lyase activity(GO:0030570)
0.1 0.3 GO:0004512 inositol-3-phosphate synthase activity(GO:0004512)
0.1 0.3 GO:0051010 microtubule plus-end binding(GO:0051010)
0.1 0.3 GO:0070034 telomerase RNA binding(GO:0070034)
0.1 1.0 GO:0047259 glucomannan 4-beta-mannosyltransferase activity(GO:0047259)
0.1 0.2 GO:0004462 lactoylglutathione lyase activity(GO:0004462)
0.1 0.6 GO:0046933 proton-transporting ATP synthase activity, rotational mechanism(GO:0046933)
0.1 0.3 GO:0016707 gibberellin 3-beta-dioxygenase activity(GO:0016707)
0.1 2.0 GO:0004565 beta-galactosidase activity(GO:0004565)
0.1 0.3 GO:0004556 alpha-amylase activity(GO:0004556)
0.1 1.1 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.1 1.0 GO:1990939 ATP-dependent microtubule motor activity(GO:1990939)
0.1 0.7 GO:0009979 16:0 monogalactosyldiacylglycerol desaturase activity(GO:0009979)
0.1 0.5 GO:0015120 phosphoglycerate transmembrane transporter activity(GO:0015120) aldonate transmembrane transporter activity(GO:0042879)
0.1 0.9 GO:0016847 1-aminocyclopropane-1-carboxylate synthase activity(GO:0016847)
0.1 0.3 GO:0004640 phosphoribosylanthranilate isomerase activity(GO:0004640)
0.1 0.4 GO:0045544 gibberellin 20-oxidase activity(GO:0045544)
0.1 0.3 GO:0080116 glucuronoxylan glucuronosyltransferase activity(GO:0080116)
0.1 2.0 GO:0008810 cellulase activity(GO:0008810)
0.1 0.4 GO:0018708 thiol S-methyltransferase activity(GO:0018708)
0.1 0.6 GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor(GO:0016646)
0.1 0.4 GO:0004478 methionine adenosyltransferase activity(GO:0004478)
0.1 0.5 GO:0003885 D-arabinono-1,4-lactone oxidase activity(GO:0003885)
0.1 0.2 GO:0034596 phosphatidylinositol phosphate 4-phosphatase activity(GO:0034596) phosphatidylinositol-4-phosphate phosphatase activity(GO:0043812)
0.1 1.4 GO:0005089 Rho guanyl-nucleotide exchange factor activity(GO:0005089)
0.1 0.3 GO:0004075 biotin carboxylase activity(GO:0004075)
0.1 1.8 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.1 0.5 GO:0022833 mechanically-gated ion channel activity(GO:0008381) mechanically gated channel activity(GO:0022833)
0.1 0.2 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
0.1 0.2 GO:0001216 bacterial-type RNA polymerase transcription factor activity, sequence-specific DNA binding(GO:0001130) bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding(GO:0001216)
0.1 0.3 GO:0033843 xyloglucan 6-xylosyltransferase activity(GO:0033843)
0.1 0.3 GO:0043142 ATP-dependent DNA helicase activity(GO:0004003) ATP-dependent helicase activity(GO:0008026) single-stranded DNA-dependent ATP-dependent DNA helicase activity(GO:0017116) single-stranded DNA-dependent ATPase activity(GO:0043142) purine NTP-dependent helicase activity(GO:0070035)
0.1 1.4 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.1 0.4 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 0.3 GO:0016882 cyclo-ligase activity(GO:0016882)
0.1 0.9 GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity(GO:0016308)
0.1 0.5 GO:0004559 alpha-mannosidase activity(GO:0004559)
0.1 2.0 GO:0005179 hormone activity(GO:0005179)
0.1 0.5 GO:0003999 adenine phosphoribosyltransferase activity(GO:0003999)
0.1 0.2 GO:0004400 histidinol-phosphate transaminase activity(GO:0004400)
0.1 0.4 GO:0016794 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity(GO:0008893) diphosphoric monoester hydrolase activity(GO:0016794)
0.1 0.2 GO:0070402 NADPH binding(GO:0070402)
0.1 0.2 GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity(GO:0003983)
0.1 0.3 GO:0045547 dehydrodolichyl diphosphate synthase activity(GO:0045547)
0.1 0.2 GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity(GO:0003849)
0.1 0.9 GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity(GO:0047196)
0.1 1.3 GO:0102337 3-oxo-arachidoyl-CoA synthase activity(GO:0102336) 3-oxo-cerotoyl-CoA synthase activity(GO:0102337) 3-oxo-lignoceronyl-CoA synthase activity(GO:0102338)
0.1 1.0 GO:0010329 auxin efflux transmembrane transporter activity(GO:0010329)
0.1 0.4 GO:0010011 auxin binding(GO:0010011)
0.1 0.4 GO:0004024 alcohol dehydrogenase activity, zinc-dependent(GO:0004024)
0.1 0.3 GO:0034511 U3 snoRNA binding(GO:0034511)
0.1 0.2 GO:0047498 calcium-dependent phospholipase A2 activity(GO:0047498)
0.1 0.2 GO:0070818 oxygen-dependent protoporphyrinogen oxidase activity(GO:0004729) protoporphyrinogen oxidase activity(GO:0070818)
0.1 0.6 GO:0103075 indole-3-pyruvate monooxygenase activity(GO:0103075)
0.1 0.4 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.1 0.3 GO:0008728 GTP diphosphokinase activity(GO:0008728)
0.1 0.2 GO:0035591 MAP-kinase scaffold activity(GO:0005078) protein kinase C binding(GO:0005080) protein complex scaffold(GO:0032947) signaling adaptor activity(GO:0035591)
0.0 0.3 GO:0051003 magnesium chelatase activity(GO:0016851) ligase activity, forming nitrogen-metal bonds(GO:0051002) ligase activity, forming nitrogen-metal bonds, forming coordination complexes(GO:0051003)
0.0 0.2 GO:0000150 recombinase activity(GO:0000150)
0.0 0.3 GO:0050062 long-chain-fatty-acyl-CoA reductase activity(GO:0050062)
0.0 2.5 GO:0004190 aspartic-type endopeptidase activity(GO:0004190)
0.0 0.2 GO:0051019 mitogen-activated protein kinase binding(GO:0051019)
0.0 0.2 GO:0047724 inosine nucleosidase activity(GO:0047724)
0.0 0.2 GO:0009678 hydrogen-translocating pyrophosphatase activity(GO:0009678)
0.0 0.3 GO:0052656 L-leucine transaminase activity(GO:0052654) L-valine transaminase activity(GO:0052655) L-isoleucine transaminase activity(GO:0052656)
0.0 3.7 GO:0030599 pectinesterase activity(GO:0030599)
0.0 0.2 GO:0004127 cytidylate kinase activity(GO:0004127)
0.0 0.3 GO:0004310 farnesyl-diphosphate farnesyltransferase activity(GO:0004310) squalene synthase activity(GO:0051996)
0.0 0.4 GO:0052623 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.0 0.3 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.0 2.6 GO:0003777 microtubule motor activity(GO:0003777)
0.0 0.1 GO:0046409 p-coumarate 3-hydroxylase activity(GO:0046409)
0.0 0.8 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 0.2 GO:0004112 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.0 0.4 GO:0015462 protein-transmembrane transporting ATPase activity(GO:0015462)
0.0 0.5 GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity(GO:0033926)
0.0 0.1 GO:0010280 UDP-L-rhamnose synthase activity(GO:0010280) UDP-glucose 4,6-dehydratase activity(GO:0050377)
0.0 0.7 GO:0008175 tRNA methyltransferase activity(GO:0008175)
0.0 0.1 GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity(GO:0008534)
0.0 0.3 GO:0048487 beta-tubulin binding(GO:0048487)
0.0 0.2 GO:0016040 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.0 0.3 GO:0004161 dimethylallyltranstransferase activity(GO:0004161)
0.0 0.2 GO:0032135 DNA insertion or deletion binding(GO:0032135)
0.0 0.1 GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity(GO:0004367)
0.0 0.2 GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity(GO:0003977)
0.0 0.3 GO:0008083 growth factor activity(GO:0008083)
0.0 0.4 GO:0070181 small ribosomal subunit rRNA binding(GO:0070181)
0.0 0.1 GO:0031219 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.0 0.1 GO:0004042 acetyl-CoA:L-glutamate N-acetyltransferase activity(GO:0004042)
0.0 0.2 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.0 0.2 GO:0004072 aspartate kinase activity(GO:0004072)
0.0 0.5 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.0 1.3 GO:0045735 nutrient reservoir activity(GO:0045735)
0.0 0.7 GO:0019203 carbohydrate phosphatase activity(GO:0019203)
0.0 0.1 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.0 0.2 GO:0005049 nuclear export signal receptor activity(GO:0005049)
0.0 0.5 GO:0015386 potassium:proton antiporter activity(GO:0015386)
0.0 1.2 GO:0016759 cellulose synthase activity(GO:0016759)
0.0 0.2 GO:0016774 phosphotransferase activity, carboxyl group as acceptor(GO:0016774)
0.0 0.4 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 0.1 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.0 0.5 GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity(GO:0016538)
0.0 0.4 GO:0015035 protein disulfide oxidoreductase activity(GO:0015035)
0.0 0.4 GO:0004629 phospholipase C activity(GO:0004629)
0.0 0.2 GO:0004126 cytidine deaminase activity(GO:0004126)
0.0 0.8 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.0 0.2 GO:0043539 protein serine/threonine kinase activator activity(GO:0043539)
0.0 0.7 GO:0030898 microfilament motor activity(GO:0000146) actin-dependent ATPase activity(GO:0030898)
0.0 0.3 GO:0008506 sucrose:proton symporter activity(GO:0008506)
0.0 0.2 GO:0001872 (1->3)-beta-D-glucan binding(GO:0001872)
0.0 0.2 GO:0004340 glucokinase activity(GO:0004340) glucose binding(GO:0005536) mannokinase activity(GO:0019158)
0.0 0.3 GO:0004032 alditol:NADP+ 1-oxidoreductase activity(GO:0004032)
0.0 1.9 GO:0008017 microtubule binding(GO:0008017)
0.0 0.2 GO:0019843 rRNA binding(GO:0019843)
0.0 0.1 GO:0016453 acetyl-CoA C-acetyltransferase activity(GO:0003985) C-acetyltransferase activity(GO:0016453)
0.0 0.1 GO:0036218 dTTP diphosphatase activity(GO:0036218)
0.0 0.2 GO:0016872 intramolecular lyase activity(GO:0016872)
0.0 0.1 GO:0016842 amidine-lyase activity(GO:0016842)
0.0 0.1 GO:0000062 fatty-acyl-CoA binding(GO:0000062)
0.0 0.2 GO:0016987 core DNA-dependent RNA polymerase binding promoter specificity activity(GO:0000996) sigma factor activity(GO:0016987)
0.0 0.1 GO:1990883 rRNA cytidine N-acetyltransferase activity(GO:1990883)
0.0 1.1 GO:0001871 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.0 2.5 GO:0004252 serine-type endopeptidase activity(GO:0004252)
0.0 0.4 GO:0015250 water transmembrane transporter activity(GO:0005372) water channel activity(GO:0015250)
0.0 0.1 GO:0004001 adenosine kinase activity(GO:0004001)
0.0 0.2 GO:0008121 ubiquinol-cytochrome-c reductase activity(GO:0008121) oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor(GO:0016681)
0.0 0.1 GO:0004129 cytochrome-c oxidase activity(GO:0004129) heme-copper terminal oxidase activity(GO:0015002) oxidoreductase activity, acting on a heme group of donors(GO:0016675) oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor(GO:0016676)
0.0 0.2 GO:0015631 tubulin binding(GO:0015631)
0.0 0.1 GO:0071933 protein kinase A regulatory subunit binding(GO:0034237) protein kinase A binding(GO:0051018) Arp2/3 complex binding(GO:0071933)
0.0 0.2 GO:0017048 Rho GTPase binding(GO:0017048)
0.0 0.6 GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity(GO:0047262)
0.0 0.1 GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity(GO:0046509)
0.0 0.2 GO:0034647 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.0 0.3 GO:0030674 protein binding, bridging(GO:0030674)
0.0 0.1 GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity(GO:0008963)
0.0 0.3 GO:0008889 glycerophosphodiester phosphodiesterase activity(GO:0008889)
0.0 0.8 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.2 GO:0019104 DNA N-glycosylase activity(GO:0019104)
0.0 0.1 GO:0008515 sucrose transmembrane transporter activity(GO:0008515)
0.0 0.9 GO:0016413 O-acetyltransferase activity(GO:0016413)
0.0 0.1 GO:0070182 DNA polymerase binding(GO:0070182)
0.0 0.1 GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity(GO:0004514)
0.0 0.6 GO:0051087 chaperone binding(GO:0051087)
0.0 0.1 GO:0004828 serine-tRNA ligase activity(GO:0004828)
0.0 0.3 GO:0043138 3'-5' DNA helicase activity(GO:0043138)
0.0 0.2 GO:0009927 histidine phosphotransfer kinase activity(GO:0009927)
0.0 0.2 GO:0008173 RNA methyltransferase activity(GO:0008173)
0.0 0.6 GO:0018024 histone-lysine N-methyltransferase activity(GO:0018024)
0.0 0.1 GO:0005451 monovalent cation:proton antiporter activity(GO:0005451)
0.0 0.2 GO:0019798 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798) peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.0 0.1 GO:0004048 anthranilate phosphoribosyltransferase activity(GO:0004048)
0.0 0.5 GO:0045309 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.1 GO:0008878 glucose-1-phosphate adenylyltransferase activity(GO:0008878)
0.0 0.1 GO:0008106 alcohol dehydrogenase (NADP+) activity(GO:0008106)
0.0 0.1 GO:0004652 polynucleotide adenylyltransferase activity(GO:0004652)
0.0 0.2 GO:0017022 myosin binding(GO:0017022)
0.0 0.5 GO:0019199 transmembrane receptor protein kinase activity(GO:0019199)
0.0 0.1 GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity(GO:0003830)
0.0 0.2 GO:0070567 cytidylyltransferase activity(GO:0070567)
0.0 0.2 GO:0004708 MAP kinase kinase activity(GO:0004708)
0.0 0.3 GO:0010333 terpene synthase activity(GO:0010333)
0.0 0.6 GO:0008320 protein transmembrane transporter activity(GO:0008320) macromolecule transmembrane transporter activity(GO:0022884)
0.0 1.8 GO:0009055 electron carrier activity(GO:0009055)
0.0 0.4 GO:0005200 structural constituent of cytoskeleton(GO:0005200)
0.0 0.0 GO:0045140 inositol phosphoceramide synthase activity(GO:0045140)
0.0 0.1 GO:0010429 methyl-CpNpG binding(GO:0010428) methyl-CpNpN binding(GO:0010429)
0.0 1.6 GO:0008757 S-adenosylmethionine-dependent methyltransferase activity(GO:0008757)
0.0 0.1 GO:0005452 inorganic anion exchanger activity(GO:0005452)
0.0 0.2 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 0.3 GO:0008378 galactosyltransferase activity(GO:0008378)
0.0 0.1 GO:0004045 aminoacyl-tRNA hydrolase activity(GO:0004045)
0.0 0.5 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 0.2 GO:0017056 structural constituent of nuclear pore(GO:0017056)
0.0 2.9 GO:0003735 structural constituent of ribosome(GO:0003735)
0.0 0.7 GO:0003755 peptidyl-prolyl cis-trans isomerase activity(GO:0003755)
0.0 0.0 GO:0080045 quercetin 3'-O-glucosyltransferase activity(GO:0080045)
0.0 0.1 GO:0003913 DNA photolyase activity(GO:0003913)
0.0 0.0 GO:0030943 mitochondrion targeting sequence binding(GO:0030943)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.3 ST WNT BETA CATENIN PATHWAY Wnt/beta-catenin Pathway
0.1 0.8 PID HES HEY PATHWAY Notch-mediated HES/HEY network
0.1 0.3 PID BETA CATENIN NUC PATHWAY Regulation of nuclear beta catenin signaling and target gene transcription
0.1 0.5 PID ATM PATHWAY ATM pathway
0.1 0.2 PID S1P S1P1 PATHWAY S1P1 pathway
0.1 0.3 PID AP1 PATHWAY AP-1 transcription factor network
0.0 0.2 PID IFNG PATHWAY IFN-gamma pathway
0.0 0.3 PID FANCONI PATHWAY Fanconi anemia pathway
0.0 0.3 PID CXCR4 PATHWAY CXCR4-mediated signaling events
0.0 0.2 PID HIF1 TFPATHWAY HIF-1-alpha transcription factor network
0.0 0.2 PID MYC ACTIV PATHWAY Validated targets of C-MYC transcriptional activation
0.0 0.1 PID HNF3B PATHWAY FOXA2 and FOXA3 transcription factor networks
0.0 0.1 PID ARF 3PATHWAY Arf1 pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 REACTOME GABA SYNTHESIS RELEASE REUPTAKE AND DEGRADATION Genes involved in GABA synthesis, release, reuptake and degradation
0.1 0.5 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.1 0.4 REACTOME INTEGRATION OF ENERGY METABOLISM Genes involved in Integration of energy metabolism
0.1 1.5 REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION Genes involved in Factors involved in megakaryocyte development and platelet production
0.1 0.3 REACTOME ABACAVIR TRANSPORT AND METABOLISM Genes involved in Abacavir transport and metabolism
0.1 0.1 REACTOME G2 M DNA DAMAGE CHECKPOINT Genes involved in G2/M DNA damage checkpoint
0.1 0.4 REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT Genes involved in Lipid digestion, mobilization, and transport
0.1 0.2 REACTOME PREFOLDIN MEDIATED TRANSFER OF SUBSTRATE TO CCT TRIC Genes involved in Prefoldin mediated transfer of substrate to CCT/TriC
0.1 0.2 REACTOME PRE NOTCH EXPRESSION AND PROCESSING Genes involved in Pre-NOTCH Expression and Processing
0.1 0.2 REACTOME G1 S SPECIFIC TRANSCRIPTION Genes involved in G1/S-Specific Transcription
0.1 0.3 REACTOME PEROXISOMAL LIPID METABOLISM Genes involved in Peroxisomal lipid metabolism
0.1 0.4 REACTOME UNWINDING OF DNA Genes involved in Unwinding of DNA
0.1 0.2 REACTOME ASSOCIATION OF TRIC CCT WITH TARGET PROTEINS DURING BIOSYNTHESIS Genes involved in Association of TriC/CCT with target proteins during biosynthesis
0.1 0.7 REACTOME EXTENSION OF TELOMERES Genes involved in Extension of Telomeres
0.1 0.2 REACTOME NOD1 2 SIGNALING PATHWAY Genes involved in NOD1/2 Signaling Pathway
0.0 0.4 REACTOME DEVELOPMENTAL BIOLOGY Genes involved in Developmental Biology
0.0 0.1 REACTOME COPI MEDIATED TRANSPORT Genes involved in COPI Mediated Transport