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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT4G23550

Z-value: 2.06

Transcription factors associated with AT4G23550

Gene Symbol Gene ID Gene Info
AT4G23550 WRKY family transcription factor

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
WRKY29arTal_v1_Chr4_+_12291632_122916320.552.5e-03Click!

Activity profile of AT4G23550 motif

Sorted Z-values of AT4G23550 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_+_10892445 9.59 AT1G30700.1
FAD-binding Berberine family protein
Chr2_+_18066960 9.48 AT2G43510.1
trypsin inhibitor protein 1
Chr2_-_13101371 9.48 AT2G30750.1
cytochrome P450 family 71 polypeptide
Chr5_+_16290386 9.29 AT5G40690.1
histone-lysine N-methyltransferase trithorax-like protein
Chr1_-_24433165 8.77 AT1G65690.1
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr2_+_19375985 8.33 AT2G47190.1
myb domain protein 2
Chr3_+_17724400 8.09 AT3G48020.1
hypothetical protein
Chr2_-_18646606 7.99 AT2G45220.1
Plant invertase/pectin methylesterase inhibitor superfamily
Chr1_-_25662276 7.62 AT1G68450.1
VQ motif-containing protein
Chr3_-_1063103 7.61 AT3G04070.2
AT3G04070.1
NAC domain containing protein 47
Chr3_-_23410360 7.49 AT3G63380.1
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Chr1_-_29622445 7.41 AT1G78780.1
AT1G78780.2
AT1G78780.4
pathogenesis-related family protein
Chr1_-_1996355 7.29 AT1G06520.1
glycerol-3-phosphate acyltransferase 1
Chr2_-_18077517 7.25 AT2G43570.1
chitinase
Chr1_+_21652988 7.22 AT1G58340.1
MATE efflux family protein
Chr3_+_4109375 7.21 AT3G12910.1
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr4_+_11269985 7.09 AT4G21120.1
AT4G21120.2
amino acid transporter 1
Chr3_+_4603885 7.05 AT3G13950.1
ankyrin
Chr4_+_17579618 6.91 AT4G37390.1
Auxin-responsive GH3 family protein
Chr2_+_12322386 6.88 AT2G28710.1
C2H2-type zinc finger family protein
Chr5_-_19060121 6.73 AT5G46950.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr5_-_25089603 6.59 AT5G62480.3
AT5G62480.2
AT5G62480.1
glutathione S-transferase tau 9
Chr5_-_9000345 6.55 AT5G25820.1
Exostosin family protein
Chr1_-_26338818 6.52 AT1G69930.1
glutathione S-transferase TAU 11
Chr1_-_9128568 6.50 AT1G26380.1
FAD-binding Berberine family protein
Chr1_-_9143336 6.49 AT1G26420.1
FAD-binding Berberine family protein
Chr1_+_23072222 6.39 AT1G62370.1
RING/U-box superfamily protein
Chr5_-_14935885 6.36 AT5G37600.1
hypothetical protein
Chr5_-_2079005 6.20 AT5G06720.1
peroxidase 2
Chr4_-_17571743 6.19 AT4G37370.1
cytochrome P450, family 81, subfamily D, polypeptide 8
Chr4_-_1046993 6.18 AT4G02380.2
AT4G02380.1
AT4G02380.3
senescence-associated gene 21
Chr1_-_23460884 6.15 AT1G63245.1
CLAVATA3/ESR-RELATED 14
Chr4_-_16347364 6.12 AT4G34135.1
AT4G34135.2
UDP-glucosyltransferase 73B2
Chr5_+_19620267 6.07 AT5G48410.4
AT5G48410.3
AT5G48410.2
AT5G48410.1
glutamate receptor 1.3
Chr3_-_18241341 6.05 AT3G49210.2
O-acyltransferase (WSD1-like) family protein
Chr5_-_23281271 6.05 AT5G57480.1
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_-_18241524 5.95 AT3G49210.1
O-acyltransferase (WSD1-like) family protein
Chr4_-_16102196 5.85 AT4G33467.1
AT4G33467.2
hypothetical protein
Chr4_+_10818128 5.65 AT4G19970.1
nucleotide-diphospho-sugar transferase family protein
Chr4_-_10765781 5.62 AT4G19810.1
AT4G19810.2
Glycosyl hydrolase family protein with chitinase insertion domain-containing protein
Chr2_-_18463533 5.61 AT2G44790.1
uclacyanin 2
Chr5_-_18804056 5.61 AT5G46350.1
WRKY DNA-binding protein 8
Chr1_-_659980 5.60 AT1G02920.1
glutathione S-transferase 7
Chr1_+_25473544 5.59 AT1G67920.1
hypothetical protein
Chr4_-_7410406 5.57 AT4G12490.1
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Chr5_-_15575437 5.45 AT5G38900.2
Thioredoxin superfamily protein
Chr2_-_11800928 5.39 AT2G27660.1
Cysteine/Histidine-rich C1 domain family protein
Chr2_+_16460247 5.37 AT2G39420.1
alpha/beta-Hydrolases superfamily protein
Chr3_+_296024 5.35 AT3G01830.2
AT3G01830.1
Calcium-binding EF-hand family protein
Chr4_+_7148124 5.31 AT4G11890.3
AT4G11890.1
AT4G11890.4
Protein kinase superfamily protein
Chr5_-_17881483 5.30 AT5G44380.1
AT5G44380.2
FAD-binding Berberine family protein
Chr5_-_15575712 5.27 AT5G38900.1
Thioredoxin superfamily protein
Chr5_-_19735489 5.24 AT5G48657.6
AT5G48657.5
AT5G48657.1
defense protein-like protein
Chr3_-_20361560 5.20 AT3G54950.1
patatin-like protein 6
Chr5_+_8752684 5.19 AT5G25260.1
SPFH/Band 7/PHB domain-containing membrane-associated protein family
Chr3_-_17199363 5.14 AT3G46690.1
UDP-Glycosyltransferase superfamily protein
Chr2_-_7707954 5.13 AT2G17740.1
Cysteine/Histidine-rich C1 domain family protein
Chr3_+_18465318 5.13 AT3G49780.1
phytosulfokine 4 precursor
Chr5_+_4461554 5.11 AT5G13820.2
telomeric DNA binding protein 1
Chr5_-_19735669 5.08 AT5G48657.3
AT5G48657.2
AT5G48657.4
defense protein-like protein
Chr1_+_10897925 5.03 AT1G30720.1
FAD-binding Berberine family protein
Chr4_-_8273903 5.00 AT4G14365.1
hypothetical protein
Chr1_+_9378404 4.99 AT1G27020.1
plant/protein
Chr1_-_19278603 4.98 AT1G51890.4
AT1G51890.5
AT1G51890.3
AT1G51890.2
AT1G51890.1
Leucine-rich repeat protein kinase family protein
Chr3_-_9595283 4.92 AT3G26210.1
cytochrome P450, family 71, subfamily B, polypeptide 23
Chr1_+_9825169 4.88 AT1G28130.1
Auxin-responsive GH3 family protein
Chr2_+_6893949 4.88 AT2G15830.1
hypothetical protein
Chr5_+_4460840 4.85 AT5G13820.1
telomeric DNA binding protein 1
Chr3_+_5249112 4.82 AT3G15518.1
hypothetical protein
Chr1_+_9825914 4.78 AT1G28130.2
Auxin-responsive GH3 family protein
Chr5_-_25168060 4.74 AT5G62680.1
Major facilitator superfamily protein
Chr3_+_6093990 4.72 AT3G17810.1
pyrimidine 1
Chr5_+_20090648 4.67 AT5G49520.1
WRKY DNA-binding protein 48
Chr2_-_17464242 4.60 AT2G41850.1
polygalacturonase ADPG2-like protein
Chr4_+_10875233 4.58 AT4G20110.2
AT4G20110.1
VACUOLAR SORTING RECEPTOR 7
Chr3_+_19875375 4.56 AT3G53600.1
C2H2-type zinc finger family protein
Chr2_-_16860779 4.56 AT2G40370.1
laccase 5
Chr1_-_19261755 4.55 AT1G51860.2
AT1G51860.1
Leucine-rich repeat protein kinase family protein
Chr4_-_14902144 4.53 AT4G30490.1
AFG1-like ATPase family protein
Chr3_+_22052121 4.50 AT3G59700.1
lectin-receptor kinase
Chr5_+_12558154 4.48 AT5G33290.1
xylogalacturonan deficient 1
Chr1_-_29623171 4.45 AT1G78780.5
pathogenesis-related family protein
Chr3_-_11400332 4.44 AT3G29590.1
HXXXD-type acyl-transferase family protein
Chr1_+_27118177 4.32 AT1G72060.1
serine-type endopeptidase inhibitor
Chr5_+_25908247 4.26 AT5G64810.1
WRKY DNA-binding protein 51
Chr1_+_17798979 4.26 AT1G48210.5
AT1G48210.7
AT1G48210.4
AT1G48210.6
Protein kinase superfamily protein
Chr1_-_29623337 4.25 AT1G78780.3
pathogenesis-related family protein
Chr4_-_10567838 4.22 AT4G19370.1
chitin synthase, putative (DUF1218)
Chr2_-_13613573 4.21 AT2G31990.1
AT2G31990.3
AT2G31990.2
Exostosin family protein
Chr1_+_4915491 4.21 AT1G14370.1
protein kinase 2A
Chr2_+_7713234 4.21 AT2G17760.1
Eukaryotic aspartyl protease family protein
Chr1_-_3756998 4.18 AT1G11210.1
cotton fiber protein, putative (DUF761)
Chr5_+_23584789 4.17 AT5G58350.1
with no lysine (K) kinase 4
Chr1_+_24357749 4.16 AT1G65500.1
transmembrane protein
Chr1_+_10244453 4.11 AT1G29290.1
B-cell lymphoma 6 protein
Chr4_-_386479 4.11 AT4G00900.2
ER-type Ca2+-ATPase 2
Chr5_-_17508752 4.07 AT5G43580.1
Serine protease inhibitor, potato inhibitor I-type family protein
Chr3_+_5258715 4.07 AT3G15534.1
hypothetical protein
Chr4_-_386850 4.04 AT4G00900.1
ER-type Ca2+-ATPase 2
Chr1_-_23818481 4.04 AT1G64170.1
cation/H+ exchanger 16
Chr1_+_6622055 4.03 AT1G19180.3
AT1G19180.2
jasmonate-zim-domain protein 1
Chr2_-_16368570 4.01 AT2G39210.1
Major facilitator superfamily protein
Chr3_+_17285565 3.99 AT3G46930.1
AT3G46930.2
AT3G46930.5
AT3G46930.3
AT3G46930.6
AT3G46930.4
Protein kinase superfamily protein
Chr3_-_9710100 3.98 AT3G26500.1
plant intracellular ras group-related LRR 2
Chr1_-_2432057 3.98 AT1G07870.2
AT1G07870.1
Protein kinase superfamily protein
Chr1_+_27954129 3.97 AT1G74360.1
Leucine-rich repeat protein kinase family protein
Chr2_-_2259633 3.97 AT2G05910.1
LURP-one-like protein (DUF567)
Chr2_+_18961283 3.96 AT2G46150.1
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr1_+_6149178 3.96 AT1G17860.1
Kunitz family trypsin and protease inhibitor protein
Chr3_-_11030906 3.95 AT3G29034.1
transmembrane protein
Chr4_+_7147865 3.95 AT4G11890.2
Protein kinase superfamily protein
Chr2_-_16359943 3.94 AT2G39200.1
Seven transmembrane MLO family protein
Chr5_+_20436180 3.93 AT5G50200.3
AT5G50200.2
nitrate transmembrane transporter
Chr1_+_17798431 3.92 AT1G48210.1
AT1G48210.2
AT1G48210.3
Protein kinase superfamily protein
Chr5_+_25550937 3.90 AT5G63850.1
amino acid permease 4
Chr5_+_21534473 3.90 AT5G53120.6
AT5G53120.1
AT5G53120.2
spermidine synthase 3
Chr5_-_22507879 3.90 AT5G55560.1
Protein kinase superfamily protein
Chr3_+_3442237 3.89 AT3G10985.1
senescence associated gene 20
Chr4_-_10404393 3.88 AT4G18990.1
AT4G18990.2
xyloglucan endotransglucosylase/hydrolase 29
Chr5_-_1217362 3.88 AT5G04340.1
6
Chr2_-_476650 3.87 AT2G02010.1
glutamate decarboxylase 4
Chr1_+_6621777 3.87 AT1G19180.1
jasmonate-zim-domain protein 1
Chr3_-_1678968 3.86 AT3G05690.2
AT3G05690.1
nuclear factor Y, subunit A2
Chr3_+_390720 3.86 AT3G02150.1
AT3G02150.2
plastid transcription factor 1
Chr1_+_24342483 3.85 AT1G65483.1
hypothetical protein
Chr5_-_213472 3.83 AT5G01540.1
lectin receptor kinase a4.1
Chr5_-_8145252 3.83 AT5G24090.1
chitinase A
Chr3_-_16656575 3.81 AT3G45410.1
Concanavalin A-like lectin protein kinase family protein
Chr2_-_8329944 3.81 AT2G19190.1
FLG22-induced receptor-like kinase 1
Chr5_+_21534766 3.80 AT5G53120.7
AT5G53120.3
spermidine synthase 3
Chr4_+_1306313 3.75 AT4G02940.1
oxidoreductase, 2OG-Fe(II) oxygenase family protein
Chr4_+_10838310 3.74 AT4G20000.1
VQ motif-containing protein
Chr5_+_1541218 3.73 AT5G05190.1
hypothetical protein (DUF3133)
Chr5_-_18679191 3.73 AT5G46050.1
peptide transporter 3
Chr2_-_476997 3.72 AT2G02010.2
glutamate decarboxylase 4
Chr1_+_26423874 3.72 AT1G70170.1
matrix metalloproteinase
Chr3_-_6826585 3.71 AT3G19660.1
hypothetical protein
Chr2_-_1379130 3.71 AT2G04100.1
AT2G04100.2
MATE efflux family protein
Chr1_-_26481630 3.67 AT1G70300.1
K+ uptake permease 6
Chr4_-_13222376 3.64 AT4G26080.1
Protein phosphatase 2C family protein
Chr5_+_20436426 3.63 AT5G50200.1
nitrate transmembrane transporter
Chr4_-_17206033 3.63 AT4G36430.1
Peroxidase superfamily protein
Chr5_+_5560607 3.62 AT5G16910.1
cellulose-synthase like D2
Chr3_-_9313599 3.61 AT3G25610.1
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Chr5_-_18676883 3.60 AT5G46050.2
peptide transporter 3
Chr5_+_21771811 3.60 AT5G53590.1
SAUR-like auxin-responsive protein family
Chr1_-_26163715 3.60 AT1G69570.1
Dof-type zinc finger DNA-binding family protein
Chr3_+_2003393 3.58 AT3G06490.1
myb domain protein 108
Chr2_-_17002528 3.56 AT2G40750.1
WRKY DNA-binding protein 54
Chr3_-_18294621 3.55 AT3G49340.1
Cysteine proteinases superfamily protein
Chr5_+_21535260 3.54 AT5G53120.5
spermidine synthase 3
Chr1_+_28163344 3.53 AT1G75000.1
GNS1/SUR4 membrane protein family
Chr5_-_3402389 3.53 AT5G10760.1
Eukaryotic aspartyl protease family protein
Chr5_+_26705785 3.53 AT5G66870.1
ASYMMETRIC LEAVES 2-like 1
Chr1_-_23226983 3.51 AT1G62710.1
beta vacuolar processing enzyme
Chr1_+_25788305 3.51 AT1G68690.2
AT1G68690.1
AT1G68690.3
Protein kinase superfamily protein
Chr5_+_21535059 3.50 AT5G53120.4
spermidine synthase 3
Chr3_+_3016490 3.48 AT3G09830.3
AT3G09830.1
AT3G09830.2
Protein kinase superfamily protein
Chr5_+_6061298 3.47 AT5G18310.2
AT5G18310.1
AT5G18310.3
ubiquitin hydrolase
Chr4_-_8283263 3.46 AT4G14370.1
AT4G14370.3
AT4G14370.2
Disease resistance protein (TIR-NBS-LRR class) family
Chr4_+_13210230 3.46 AT4G26050.1
plant intracellular ras group-related LRR 8
Chr1_+_29099839 3.45 AT1G77450.1
NAC domain containing protein 32
Chr5_+_9683988 3.44 AT5G27420.1
carbon/nitrogen insensitive 1
Chr5_+_16733663 3.44 AT5G41800.1
Transmembrane amino acid transporter family protein
Chr4_-_16371529 3.42 AT4G34180.1
Cyclase family protein
Chr1_-_9337759 3.42 AT1G26930.2
Galactose oxidase/kelch repeat superfamily protein
Chr4_+_983970 3.40 AT4G02250.1
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr3_-_9918810 3.39 AT3G26910.2
AT3G26910.1
AT3G26910.3
hydroxyproline-rich glycoprotein family protein
Chr3_-_6815403 3.35 AT3G19615.1
beta-1,4-xylosidase
Chr2_+_17360374 3.31 AT2G41640.1
AT2G41640.3
AT2G41640.2
Glycosyltransferase family 61 protein
Chr1_-_9337938 3.31 AT1G26930.1
Galactose oxidase/kelch repeat superfamily protein
Chr2_+_19000180 3.29 AT2G46270.2
AT2G46270.1
AT2G46270.4
AT2G46270.3
G-box binding factor 3
Chr5_-_22133688 3.27 AT5G54510.1
Auxin-responsive GH3 family protein
Chr1_+_8549191 3.26 AT1G24150.2
AT1G24150.1
formin homologue 4
Chr4_+_5448049 3.24 AT4G08555.1
hypothetical protein
Chr4_+_744804 3.23 AT4G01720.1
WRKY family transcription factor
Chr1_-_19443624 3.23 AT1G52200.1
AT1G52200.2
PLAC8 family protein
Chr4_-_14776058 3.23 AT4G30190.2
H[+]-ATPase 2
Chr4_-_14776247 3.22 AT4G30190.1
H[+]-ATPase 2
Chr3_+_3470304 3.22 AT3G11080.1
AT3G11080.2
receptor like protein 35
Chr1_-_498539 3.20 AT1G02450.1
NIM1-interacting 1
Chr4_+_18478890 3.19 AT4G39830.3
AT4G39830.1
AT4G39830.2
AT4G39830.4
Cupredoxin superfamily protein
Chr5_+_24623248 3.18 AT5G61210.1
AT5G61210.2
soluble N-ethylmaleimide-sensitive factor adaptor protein 33
Chr1_+_25041833 3.18 AT1G67070.1
AT1G67070.2
Mannose-6-phosphate isomerase, type I
Chr4_-_12143833 3.16 AT4G23190.1
AT4G23190.2
AT4G23190.3
cysteine-rich RLK (RECEPTOR-like protein kinase) 11
Chr5_+_25939562 3.15 AT5G64905.1
elicitor peptide 3 precursor
Chr5_+_3524677 3.15 AT5G11090.1
serine-rich protein-like protein
Chr1_-_4975705 3.14 AT1G14540.1
Peroxidase superfamily protein
Chr2_-_9564850 3.13 AT2G22500.1
uncoupling protein 5
Chr1_+_28537593 3.13 AT1G76040.1
AT1G76040.2
AT1G76040.3
calcium-dependent protein kinase 29
Chr2_+_7244500 3.13 AT2G16700.1
AT2G16700.3
AT2G16700.4
AT2G16700.2
actin depolymerizing factor 5
Chr1_-_4026733 3.13 AT1G11925.1
Stigma-specific Stig1 family protein
Chr5_+_9475679 3.13 AT5G26920.1
AT5G26920.2
AT5G26920.3
Cam-binding protein 60-like G
Chr5_-_4954970 3.13 AT5G15260.2
AT5G15260.1
ribosomal protein L34e superfamily protein
Chr1_-_3804185 3.13 AT1G11310.2
AT1G11310.1
Seven transmembrane MLO family protein
Chr5_+_2083964 3.12 AT5G06740.2
AT5G06740.1
Concanavalin A-like lectin protein kinase family protein
Chr1_+_5525293 3.11 AT1G16130.1
wall associated kinase-like 2
Chr5_+_4335272 3.11 AT5G13490.1
ADP/ATP carrier 2
Chr1_-_3803695 3.11 AT1G11310.3
Seven transmembrane MLO family protein
Chr4_+_9655669 3.11 AT4G17215.1
Pollen Ole e 1 allergen and extensin family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G23550

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
3.1 9.3 GO:0015802 basic amino acid transport(GO:0015802)
2.5 7.6 GO:0045764 positive regulation of cellular amine metabolic process(GO:0033240) positive regulation of cellular amino acid metabolic process(GO:0045764)
2.2 8.9 GO:0010272 response to silver ion(GO:0010272)
2.2 6.7 GO:0010446 response to alkaline pH(GO:0010446)
2.1 8.5 GO:0019567 pentose biosynthetic process(GO:0019322) arabinose biosynthetic process(GO:0019567)
2.1 14.7 GO:0006597 spermine biosynthetic process(GO:0006597)
2.1 6.2 GO:0002215 defense response to nematode(GO:0002215)
2.0 6.0 GO:0006056 cell wall mannoprotein biosynthetic process(GO:0000032) mannoprotein metabolic process(GO:0006056) mannoprotein biosynthetic process(GO:0006057) cell wall glycoprotein biosynthetic process(GO:0031506)
1.6 4.7 GO:0019859 thymine catabolic process(GO:0006210) uracil catabolic process(GO:0006212) beta-alanine biosynthetic process(GO:0019483) thymine metabolic process(GO:0019859)
1.5 4.6 GO:0044277 cell wall modification involved in abscission(GO:0009830) cell wall disassembly(GO:0044277)
1.2 3.7 GO:0044259 collagen metabolic process(GO:0032963) multicellular organism metabolic process(GO:0044236) multicellular organismal macromolecule metabolic process(GO:0044259)
1.0 3.1 GO:0015709 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
1.0 8.4 GO:1901002 positive regulation of response to salt stress(GO:1901002)
1.0 3.1 GO:0010045 response to nickel cation(GO:0010045)
1.0 3.0 GO:0032491 detection of molecule of fungal origin(GO:0032491)
0.9 9.5 GO:0009405 pathogenesis(GO:0009405)
0.9 5.5 GO:1900425 negative regulation of defense response to bacterium(GO:1900425)
0.9 2.7 GO:0032196 transposition(GO:0032196)
0.8 2.4 GO:1904580 regulation of intracellular mRNA localization(GO:1904580)
0.7 2.2 GO:1902289 negative regulation of defense response to oomycetes(GO:1902289)
0.7 9.7 GO:0042126 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128)
0.7 2.8 GO:0080168 abscisic acid transport(GO:0080168)
0.7 7.0 GO:1902025 nitrate import(GO:1902025)
0.7 4.1 GO:0072334 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.7 4.0 GO:0006624 vacuolar protein processing(GO:0006624)
0.6 1.9 GO:0055089 fatty acid homeostasis(GO:0055089)
0.6 3.8 GO:0043090 amino acid import(GO:0043090)
0.6 7.6 GO:1900424 regulation of defense response to bacterium(GO:1900424)
0.6 1.9 GO:0046203 spermidine catabolic process(GO:0046203)
0.6 6.2 GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.6 2.4 GO:0060860 regulation of floral organ abscission(GO:0060860) negative regulation of floral organ abscission(GO:0060862)
0.6 4.3 GO:0080148 negative regulation of response to water deprivation(GO:0080148)
0.6 1.8 GO:2000001 signal transduction in response to DNA damage(GO:0042770) regulation of DNA damage checkpoint(GO:2000001)
0.6 6.6 GO:0015706 nitrate transport(GO:0015706)
0.6 2.4 GO:0030259 lipid glycosylation(GO:0030259)
0.6 1.8 GO:2000693 positive regulation of seed maturation(GO:2000693)
0.6 3.0 GO:0015824 proline transport(GO:0015824)
0.6 2.3 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.6 1.1 GO:0071323 cellular response to chitin(GO:0071323)
0.6 7.3 GO:1902074 response to salt(GO:1902074)
0.6 1.7 GO:0006984 ER-nucleus signaling pathway(GO:0006984)
0.5 3.8 GO:0006000 fructose metabolic process(GO:0006000)
0.5 1.6 GO:0006809 nitric oxide biosynthetic process(GO:0006809)
0.5 1.5 GO:0010447 response to acidic pH(GO:0010447)
0.5 7.6 GO:0006538 glutamate catabolic process(GO:0006538)
0.5 10.5 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.5 6.4 GO:1900056 negative regulation of leaf senescence(GO:1900056)
0.5 0.5 GO:0006094 gluconeogenesis(GO:0006094)
0.5 1.4 GO:0006493 protein O-linked glycosylation(GO:0006493)
0.5 8.9 GO:0046341 CDP-diacylglycerol biosynthetic process(GO:0016024) CDP-diacylglycerol metabolic process(GO:0046341)
0.5 1.4 GO:1901379 positive regulation of ion transmembrane transport(GO:0034767) positive regulation of potassium ion transport(GO:0043268) regulation of potassium ion transmembrane transport(GO:1901379) regulation of cation transmembrane transport(GO:1904062)
0.5 1.8 GO:0071836 nectar secretion(GO:0071836)
0.4 6.6 GO:0015865 purine nucleotide transport(GO:0015865)
0.4 5.2 GO:0009051 pentose-phosphate shunt, oxidative branch(GO:0009051)
0.4 1.7 GO:0009727 detection of ethylene stimulus(GO:0009727)
0.4 15.2 GO:0010252 auxin homeostasis(GO:0010252)
0.4 4.6 GO:0002757 immune response-activating signal transduction(GO:0002757) innate immune response-activating signal transduction(GO:0002758)
0.4 6.3 GO:0006030 aminoglycan catabolic process(GO:0006026) chitin metabolic process(GO:0006030) chitin catabolic process(GO:0006032) amino sugar catabolic process(GO:0046348) glucosamine-containing compound catabolic process(GO:1901072)
0.4 3.3 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.4 3.2 GO:0016998 cell wall macromolecule catabolic process(GO:0016998)
0.4 1.2 GO:0046740 transport of virus in host, cell to cell(GO:0046740) multi-organism intercellular transport(GO:1902586)
0.4 3.9 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.4 1.1 GO:1902457 negative regulation of stomatal opening(GO:1902457)
0.4 3.4 GO:0010167 response to nitrate(GO:0010167)
0.4 1.1 GO:2000058 protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:2000058)
0.4 1.1 GO:0071493 cellular response to UV-B(GO:0071493)
0.4 2.6 GO:0006565 L-serine catabolic process(GO:0006565) glycine biosynthetic process from serine(GO:0019264) response to tetrahydrofolate(GO:1904481) cellular response to tetrahydrofolate(GO:1904482)
0.4 1.1 GO:1901522 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.3 1.4 GO:0035264 multicellular organism growth(GO:0035264)
0.3 3.8 GO:0009954 proximal/distal pattern formation(GO:0009954)
0.3 3.7 GO:0080086 stamen filament development(GO:0080086)
0.3 1.3 GO:0007041 lysosomal transport(GO:0007041) endosome to lysosome transport(GO:0008333)
0.3 2.7 GO:0060866 leaf abscission(GO:0060866)
0.3 4.9 GO:1900057 positive regulation of leaf senescence(GO:1900057)
0.3 0.7 GO:0002683 negative regulation of immune system process(GO:0002683) negative regulation of immune response(GO:0050777)
0.3 5.2 GO:0051555 flavone biosynthetic process(GO:0051553) flavonol biosynthetic process(GO:0051555)
0.3 3.9 GO:0048317 seed morphogenesis(GO:0048317)
0.3 1.9 GO:0071733 establishment of mitotic sister chromatid cohesion(GO:0034087) establishment of protein localization to chromosome(GO:0070199) rDNA condensation(GO:0070550) establishment of protein localization to chromatin(GO:0071169) transcriptional activation by promoter-enhancer looping(GO:0071733) gene looping(GO:0090202) dsDNA loop formation(GO:0090579)
0.3 2.9 GO:0045226 UDP-L-arabinose biosynthetic process(GO:0033358) extracellular polysaccharide biosynthetic process(GO:0045226) capsule polysaccharide biosynthetic process(GO:0045227) capsule organization(GO:0045230) extracellular polysaccharide metabolic process(GO:0046379)
0.3 2.9 GO:0009610 response to symbiotic fungus(GO:0009610)
0.3 12.1 GO:0031348 negative regulation of defense response(GO:0031348)
0.3 14.9 GO:0090487 toxin catabolic process(GO:0009407) secondary metabolite catabolic process(GO:0090487)
0.3 1.9 GO:0034227 tRNA thio-modification(GO:0034227)
0.3 1.6 GO:0006808 regulation of nitrogen utilization(GO:0006808)
0.3 0.9 GO:0010198 synergid death(GO:0010198)
0.3 1.9 GO:0071588 hydrogen peroxide mediated signaling pathway(GO:0071588)
0.3 1.9 GO:0048446 petal morphogenesis(GO:0048446)
0.3 1.8 GO:0010508 positive regulation of autophagy(GO:0010508)
0.3 6.7 GO:0046688 response to copper ion(GO:0046688)
0.3 3.3 GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway(GO:0043162)
0.3 1.2 GO:0015697 quaternary ammonium group transport(GO:0015697)
0.3 3.5 GO:0009410 response to xenobiotic stimulus(GO:0009410)
0.3 5.2 GO:0019374 galactolipid metabolic process(GO:0019374)
0.3 11.0 GO:0009816 defense response to bacterium, incompatible interaction(GO:0009816)
0.3 1.1 GO:0035435 phosphate ion transmembrane transport(GO:0035435)
0.3 5.7 GO:0006826 iron ion transport(GO:0006826)
0.3 2.2 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.3 9.5 GO:0009682 induced systemic resistance(GO:0009682)
0.3 0.8 GO:0035493 SNARE complex assembly(GO:0035493)
0.3 0.8 GO:0045901 positive regulation of translational elongation(GO:0045901) positive regulation of translational termination(GO:0045905)
0.3 3.9 GO:0002238 response to molecule of fungal origin(GO:0002238)
0.3 1.0 GO:0010971 positive regulation of G2/M transition of mitotic cell cycle(GO:0010971) positive regulation of cell cycle G2/M phase transition(GO:1902751)
0.3 1.3 GO:0042218 1-aminocyclopropane-1-carboxylate biosynthetic process(GO:0042218)
0.3 1.0 GO:0071494 cellular response to UV-C(GO:0071494)
0.3 11.9 GO:0006874 cellular calcium ion homeostasis(GO:0006874)
0.2 1.7 GO:0010306 rhamnogalacturonan II biosynthetic process(GO:0010306) rhamnogalacturonan II metabolic process(GO:0010396)
0.2 2.2 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.2 1.0 GO:0006741 NADP biosynthetic process(GO:0006741)
0.2 5.3 GO:0046854 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.2 6.4 GO:0042631 cellular response to water deprivation(GO:0042631)
0.2 9.0 GO:0072665 protein targeting to vacuole(GO:0006623) protein localization to vacuole(GO:0072665) establishment of protein localization to vacuole(GO:0072666)
0.2 1.9 GO:0009786 regulation of asymmetric cell division(GO:0009786)
0.2 1.4 GO:0033356 UDP-L-arabinose metabolic process(GO:0033356)
0.2 2.1 GO:0010358 leaf shaping(GO:0010358)
0.2 0.7 GO:0070827 cellular component maintenance(GO:0043954) chromatin maintenance(GO:0070827)
0.2 1.8 GO:0044375 regulation of peroxisome size(GO:0044375)
0.2 9.3 GO:0002239 response to oomycetes(GO:0002239)
0.2 4.0 GO:0046855 inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.2 8.1 GO:0000723 telomere maintenance(GO:0000723) telomere organization(GO:0032200)
0.2 0.9 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.2 1.3 GO:0016045 detection of bacterium(GO:0016045) detection of other organism(GO:0098543)
0.2 2.7 GO:0052542 defense response by callose deposition(GO:0052542)
0.2 2.7 GO:0033238 regulation of cellular amino acid metabolic process(GO:0006521) regulation of cellular amine metabolic process(GO:0033238)
0.2 3.1 GO:0018231 peptidyl-L-cysteine S-palmitoylation(GO:0018230) peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine(GO:0018231)
0.2 4.2 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.2 1.8 GO:0045116 protein neddylation(GO:0045116)
0.2 2.2 GO:0048354 mucilage biosynthetic process involved in seed coat development(GO:0048354)
0.2 3.3 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.2 0.9 GO:0010677 negative regulation of cellular carbohydrate metabolic process(GO:0010677)
0.2 1.1 GO:0010255 glucose mediated signaling pathway(GO:0010255)
0.2 1.6 GO:0009554 megasporogenesis(GO:0009554)
0.2 0.5 GO:0010289 homogalacturonan biosynthetic process(GO:0010289)
0.2 1.7 GO:0007292 female gamete generation(GO:0007292)
0.2 2.4 GO:0019511 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.2 2.2 GO:0009970 cellular response to sulfate starvation(GO:0009970)
0.2 2.0 GO:0006102 isocitrate metabolic process(GO:0006102)
0.2 1.1 GO:0015908 fatty acid transport(GO:0015908)
0.2 1.4 GO:0016094 polyprenol biosynthetic process(GO:0016094)
0.2 3.1 GO:0051017 actin filament bundle assembly(GO:0051017) actin filament bundle organization(GO:0061572)
0.2 0.3 GO:0051703 pollen tube reception(GO:0010483) intraspecies interaction between organisms(GO:0051703)
0.2 1.4 GO:2000779 regulation of double-strand break repair(GO:2000779)
0.2 4.5 GO:0007166 cell surface receptor signaling pathway(GO:0007166)
0.2 4.7 GO:0007031 peroxisome organization(GO:0007031)
0.1 0.6 GO:0019427 acetyl-CoA biosynthetic process from acetate(GO:0019427)
0.1 0.1 GO:0033591 response to L-ascorbic acid(GO:0033591)
0.1 0.7 GO:0034052 positive regulation of plant-type hypersensitive response(GO:0034052)
0.1 1.0 GO:0015689 molybdate ion transport(GO:0015689)
0.1 1.0 GO:0007188 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.1 2.4 GO:0002183 cytoplasmic translational initiation(GO:0002183)
0.1 2.3 GO:0009704 de-etiolation(GO:0009704)
0.1 1.2 GO:0032784 regulation of DNA-templated transcription, elongation(GO:0032784)
0.1 0.7 GO:0006517 protein deglycosylation(GO:0006517)
0.1 4.0 GO:0007264 small GTPase mediated signal transduction(GO:0007264)
0.1 4.0 GO:0009789 positive regulation of abscisic acid-activated signaling pathway(GO:0009789)
0.1 0.5 GO:0043153 entrainment of circadian clock by photoperiod(GO:0043153)
0.1 1.0 GO:0042851 alanine metabolic process(GO:0006522) alanine catabolic process(GO:0006524) pyruvate family amino acid metabolic process(GO:0009078) pyruvate family amino acid catabolic process(GO:0009080) L-alanine metabolic process(GO:0042851) L-alanine catabolic process(GO:0042853)
0.1 1.8 GO:0009612 response to mechanical stimulus(GO:0009612)
0.1 1.5 GO:0072506 phosphate ion homeostasis(GO:0055062) trivalent inorganic anion homeostasis(GO:0072506)
0.1 2.6 GO:0042744 hydrogen peroxide catabolic process(GO:0042744)
0.1 6.8 GO:0055046 microgametogenesis(GO:0055046)
0.1 2.5 GO:0045493 xylan catabolic process(GO:0045493)
0.1 1.0 GO:0051131 chaperone-mediated protein complex assembly(GO:0051131)
0.1 1.5 GO:0002237 response to molecule of bacterial origin(GO:0002237)
0.1 1.5 GO:0009641 shade avoidance(GO:0009641)
0.1 2.3 GO:0002213 defense response to insect(GO:0002213)
0.1 1.5 GO:0080163 regulation of protein serine/threonine phosphatase activity(GO:0080163)
0.1 0.4 GO:0002164 nematode larval development(GO:0002119) larval development(GO:0002164) regulation of nematode larval development(GO:0061062)
0.1 0.7 GO:0006285 base-excision repair, AP site formation(GO:0006285)
0.1 1.0 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.1 3.1 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.1 1.7 GO:0030968 endoplasmic reticulum unfolded protein response(GO:0030968)
0.1 4.0 GO:0006885 regulation of pH(GO:0006885)
0.1 0.7 GO:0010165 response to X-ray(GO:0010165)
0.1 2.8 GO:0007030 Golgi organization(GO:0007030)
0.1 1.8 GO:0015937 coenzyme A biosynthetic process(GO:0015937)
0.1 19.6 GO:0071456 cellular response to hypoxia(GO:0071456)
0.1 3.3 GO:0042542 response to hydrogen peroxide(GO:0042542)
0.1 1.1 GO:0010540 basipetal auxin transport(GO:0010540)
0.1 1.9 GO:0009638 phototropism(GO:0009638)
0.1 1.6 GO:0071577 zinc II ion transmembrane transport(GO:0071577)
0.1 0.4 GO:0010603 regulation of cytoplasmic mRNA processing body assembly(GO:0010603)
0.1 1.1 GO:0010048 vernalization response(GO:0010048)
0.1 1.5 GO:0031647 regulation of protein stability(GO:0031647)
0.1 1.4 GO:0009395 phospholipid catabolic process(GO:0009395)
0.1 1.0 GO:0010332 response to gamma radiation(GO:0010332)
0.1 3.0 GO:0048510 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.1 0.5 GO:0043570 maintenance of DNA repeat elements(GO:0043570)
0.1 2.2 GO:0006406 mRNA export from nucleus(GO:0006406) mRNA-containing ribonucleoprotein complex export from nucleus(GO:0071427)
0.1 1.5 GO:0035304 regulation of protein dephosphorylation(GO:0035304)
0.1 4.4 GO:0008037 cell recognition(GO:0008037) recognition of pollen(GO:0048544)
0.1 0.9 GO:0006621 protein retention in ER lumen(GO:0006621)
0.1 6.6 GO:0018209 peptidyl-serine phosphorylation(GO:0018105) peptidyl-serine modification(GO:0018209)
0.1 2.3 GO:0005991 trehalose metabolic process(GO:0005991)
0.1 2.8 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.1 8.0 GO:0006486 protein glycosylation(GO:0006486) glycoprotein biosynthetic process(GO:0009101) macromolecule glycosylation(GO:0043413)
0.1 0.7 GO:0000266 mitochondrial fission(GO:0000266)
0.1 0.4 GO:0000338 protein deneddylation(GO:0000338)
0.1 1.8 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.1 0.9 GO:0007186 G-protein coupled receptor signaling pathway(GO:0007186)
0.1 0.6 GO:1902223 L-phenylalanine biosynthetic process(GO:0009094) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.1 0.7 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.1 1.8 GO:0051170 nuclear import(GO:0051170)
0.1 12.5 GO:0009620 response to fungus(GO:0009620)
0.1 2.7 GO:0009624 response to nematode(GO:0009624)
0.1 3.3 GO:0034605 cellular response to heat(GO:0034605)
0.1 2.0 GO:0010208 pollen wall assembly(GO:0010208) cellular component assembly involved in morphogenesis(GO:0010927) extracellular matrix assembly(GO:0085029)
0.1 3.1 GO:0009567 fertilization(GO:0009566) double fertilization forming a zygote and endosperm(GO:0009567)
0.1 0.6 GO:0051865 protein autoubiquitination(GO:0051865)
0.1 1.6 GO:0034599 cellular response to oxidative stress(GO:0034599)
0.1 0.7 GO:0010274 hydrotropism(GO:0010274)
0.1 0.8 GO:0006465 signal peptide processing(GO:0006465)
0.0 1.8 GO:0010411 xyloglucan metabolic process(GO:0010411)
0.0 6.7 GO:0042742 defense response to bacterium(GO:0042742)
0.0 0.6 GO:0010497 plasmodesmata-mediated intercellular transport(GO:0010497)
0.0 3.0 GO:1902600 hydrogen ion transmembrane transport(GO:1902600)
0.0 0.0 GO:0071731 response to nitric oxide(GO:0071731)
0.0 0.3 GO:0006656 phosphatidylcholine biosynthetic process(GO:0006656)
0.0 1.0 GO:0030838 positive regulation of actin filament polymerization(GO:0030838) actin nucleation(GO:0045010)
0.0 0.2 GO:0009303 rRNA transcription(GO:0009303)
0.0 3.0 GO:0009267 cellular response to starvation(GO:0009267)
0.0 0.5 GO:0046856 phosphatidylinositol dephosphorylation(GO:0046856)
0.0 0.8 GO:0045324 late endosome to vacuole transport(GO:0045324)
0.0 1.3 GO:0030490 maturation of SSU-rRNA(GO:0030490)
0.0 1.8 GO:0046939 nucleotide phosphorylation(GO:0046939)
0.0 0.3 GO:1902183 regulation of shoot apical meristem development(GO:1902183)
0.0 1.0 GO:0006865 amino acid transport(GO:0006865)
0.0 11.6 GO:0016567 protein ubiquitination(GO:0016567)
0.0 2.6 GO:0009860 pollen tube growth(GO:0009860)
0.0 0.3 GO:0070475 rRNA base methylation(GO:0070475)
0.0 0.1 GO:0006723 cuticle hydrocarbon biosynthetic process(GO:0006723) raffinose metabolic process(GO:0033530)
0.0 0.9 GO:0010150 leaf senescence(GO:0010150)
0.0 1.3 GO:0009150 purine ribonucleotide metabolic process(GO:0009150)
0.0 0.4 GO:0071804 cellular potassium ion transport(GO:0071804) potassium ion transmembrane transport(GO:0071805)
0.0 0.6 GO:0006414 translational elongation(GO:0006414)
0.0 0.1 GO:0000098 sulfur amino acid catabolic process(GO:0000098)
0.0 0.5 GO:0006888 ER to Golgi vesicle-mediated transport(GO:0006888)
0.0 0.2 GO:0010143 cutin biosynthetic process(GO:0010143)
0.0 0.1 GO:0005513 detection of calcium ion(GO:0005513)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.4 13.0 GO:0017119 Golgi transport complex(GO:0017119)
0.8 4.0 GO:0033263 CORVET complex(GO:0033263)
0.7 3.7 GO:0001673 male germ cell nucleus(GO:0001673)
0.5 2.4 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.5 10.2 GO:0031012 extracellular matrix(GO:0031012)
0.4 10.0 GO:0000781 chromosome, telomeric region(GO:0000781)
0.4 3.3 GO:0000813 ESCRT I complex(GO:0000813)
0.4 9.0 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.3 5.9 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.3 5.9 GO:0031970 organelle envelope lumen(GO:0031970)
0.3 1.6 GO:0044545 NSL complex(GO:0044545)
0.3 1.8 GO:0042406 extrinsic component of endoplasmic reticulum membrane(GO:0042406)
0.3 2.0 GO:0070390 transcription export complex 2(GO:0070390)
0.2 2.5 GO:0000322 storage vacuole(GO:0000322) protein storage vacuole(GO:0000326)
0.2 7.5 GO:0031228 integral component of Golgi membrane(GO:0030173) intrinsic component of Golgi membrane(GO:0031228)
0.2 3.4 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.2 2.1 GO:0030904 retromer complex(GO:0030904)
0.2 1.1 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.2 0.9 GO:0034657 GID complex(GO:0034657)
0.2 6.1 GO:0000137 Golgi cis cisterna(GO:0000137)
0.2 1.2 GO:0016363 nuclear matrix(GO:0016363)
0.2 1.0 GO:0030915 Smc5-Smc6 complex(GO:0030915)
0.1 4.8 GO:1903293 protein serine/threonine phosphatase complex(GO:0008287) phosphatase complex(GO:1903293)
0.1 1.5 GO:0008180 COP9 signalosome(GO:0008180)
0.1 2.1 GO:0008540 proteasome regulatory particle, base subcomplex(GO:0008540)
0.1 11.3 GO:0000138 Golgi trans cisterna(GO:0000138)
0.1 1.0 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.1 1.8 GO:0005779 integral component of peroxisomal membrane(GO:0005779) intrinsic component of peroxisomal membrane(GO:0031231)
0.1 0.9 GO:0000312 plastid small ribosomal subunit(GO:0000312)
0.1 2.9 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.1 1.2 GO:0030014 CCR4-NOT complex(GO:0030014)
0.1 4.5 GO:0009504 cell plate(GO:0009504)
0.1 1.3 GO:0043230 extracellular organelle(GO:0043230) extracellular exosome(GO:0070062) extracellular vesicle(GO:1903561)
0.1 2.9 GO:0000932 cytoplasmic mRNA processing body(GO:0000932)
0.1 1.6 GO:0030125 clathrin vesicle coat(GO:0030125)
0.1 0.7 GO:0032541 cortical endoplasmic reticulum(GO:0032541)
0.1 0.9 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 1.2 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment(GO:0005793)
0.1 13.1 GO:0099503 secretory vesicle(GO:0099503)
0.1 1.0 GO:0033202 Ino80 complex(GO:0031011) DNA helicase complex(GO:0033202)
0.1 4.8 GO:0010008 endosome membrane(GO:0010008)
0.1 1.0 GO:0042575 DNA polymerase complex(GO:0042575)
0.1 0.4 GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)(GO:0000276)
0.1 0.4 GO:0019897 extrinsic component of plasma membrane(GO:0019897)
0.1 0.6 GO:0031428 box C/D snoRNP complex(GO:0031428)
0.0 0.9 GO:0000418 DNA-directed RNA polymerase IV complex(GO:0000418)
0.0 1.8 GO:0016592 mediator complex(GO:0016592)
0.0 11.7 GO:0005774 vacuolar membrane(GO:0005774)
0.0 0.8 GO:0031354 intrinsic component of plastid outer membrane(GO:0031354) integral component of plastid outer membrane(GO:0031355) intrinsic component of chloroplast outer membrane(GO:0031358) integral component of chloroplast outer membrane(GO:0031359)
0.0 2.3 GO:0015629 actin cytoskeleton(GO:0015629)
0.0 0.8 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.0 121.3 GO:0005886 plasma membrane(GO:0005886)
0.0 0.2 GO:0005787 signal peptidase complex(GO:0005787)
0.0 0.6 GO:0008023 transcription elongation factor complex(GO:0008023)
0.0 0.3 GO:0030134 ER to Golgi transport vesicle(GO:0030134)
0.0 0.4 GO:0031201 SNARE complex(GO:0031201)
0.0 0.1 GO:0000346 transcription export complex(GO:0000346) THO complex part of transcription export complex(GO:0000445)
0.0 0.8 GO:0005811 lipid particle(GO:0005811)
0.0 4.3 GO:0000151 ubiquitin ligase complex(GO:0000151)
0.0 0.2 GO:0031410 cytoplasmic vesicle(GO:0031410) intracellular vesicle(GO:0097708)
0.0 0.4 GO:0005797 Golgi medial cisterna(GO:0005797)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
2.9 14.7 GO:0016768 spermine synthase activity(GO:0016768)
2.8 19.8 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
2.0 6.0 GO:0004476 mannose-6-phosphate isomerase activity(GO:0004476)
1.7 6.8 GO:0016920 pyroglutamyl-peptidase activity(GO:0016920)
1.5 20.9 GO:0004867 serine-type endopeptidase inhibitor activity(GO:0004867)
1.5 4.4 GO:0050736 O-malonyltransferase activity(GO:0050736)
1.2 11.0 GO:0015172 acidic amino acid transmembrane transporter activity(GO:0015172)
1.0 8.4 GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity(GO:0090447)
1.0 3.1 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
1.0 6.1 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
1.0 4.0 GO:0005093 Rab GDP-dissociation inhibitor activity(GO:0005093)
1.0 11.4 GO:0050373 UDP-arabinose 4-epimerase activity(GO:0050373)
0.9 10.0 GO:0003691 double-stranded telomeric DNA binding(GO:0003691)
0.9 20.5 GO:0004568 chitinase activity(GO:0004568)
0.8 2.5 GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity(GO:0016767)
0.8 6.6 GO:0004566 beta-glucuronidase activity(GO:0004566)
0.8 2.5 GO:0052629 phosphatidylinositol-3-phosphatase activity(GO:0004438) phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity(GO:0052629)
0.8 4.0 GO:0004441 inositol-1,4-bisphosphate 1-phosphatase activity(GO:0004441)
0.8 7.6 GO:0004351 glutamate decarboxylase activity(GO:0004351)
0.7 2.1 GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors(GO:0016661)
0.7 6.2 GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.7 2.6 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.6 4.5 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.6 1.9 GO:0008265 Mo-molybdopterin cofactor sulfurase activity(GO:0008265)
0.6 1.9 GO:0052901 spermine:oxygen oxidoreductase (spermidine-forming) activity(GO:0052901)
0.6 6.2 GO:0035252 UDP-xylosyltransferase activity(GO:0035252)
0.6 6.2 GO:0005471 ATP:ADP antiporter activity(GO:0005471)
0.6 1.8 GO:0046524 sucrose-phosphate synthase activity(GO:0046524)
0.6 1.8 GO:0015146 pentose transmembrane transporter activity(GO:0015146)
0.6 1.8 GO:0016906 sterol 3-beta-glucosyltransferase activity(GO:0016906)
0.6 4.1 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.6 3.0 GO:0015193 L-proline transmembrane transporter activity(GO:0015193)
0.6 1.7 GO:0036402 proteasome-activating ATPase activity(GO:0036402)
0.6 4.0 GO:0004345 glucose-6-phosphate dehydrogenase activity(GO:0004345)
0.6 6.6 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.5 2.2 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.5 1.0 GO:0015116 sulfate transmembrane transporter activity(GO:0015116)
0.5 6.4 GO:0004714 transmembrane receptor protein tyrosine kinase activity(GO:0004714)
0.5 5.2 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.5 1.8 GO:0043916 DNA-7-methylguanine glycosylase activity(GO:0043916)
0.4 1.3 GO:0051669 levanase activity(GO:0031219) fructan beta-fructosidase activity(GO:0051669)
0.4 1.6 GO:0002151 G-quadruplex RNA binding(GO:0002151)
0.4 4.0 GO:0008865 fructokinase activity(GO:0008865)
0.4 3.5 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.4 1.8 GO:0004594 pantothenate kinase activity(GO:0004594)
0.4 2.6 GO:0004372 glycine hydroxymethyltransferase activity(GO:0004372) serine binding(GO:0070905)
0.4 1.4 GO:0097363 protein O-GlcNAc transferase activity(GO:0097363)
0.3 1.0 GO:0070678 preprotein binding(GO:0070678)
0.3 12.6 GO:0008553 hydrogen-exporting ATPase activity, phosphorylative mechanism(GO:0008553)
0.3 1.7 GO:0047780 citrate dehydratase activity(GO:0047780)
0.3 2.0 GO:0004449 isocitrate dehydrogenase (NAD+) activity(GO:0004449)
0.3 2.9 GO:0004362 glutathione-disulfide reductase activity(GO:0004362)
0.3 1.9 GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity(GO:0003841) lysophosphatidic acid acyltransferase activity(GO:0042171)
0.3 4.2 GO:0004675 transmembrane receptor protein serine/threonine kinase activity(GO:0004675)
0.3 1.2 GO:0008061 chitin binding(GO:0008061)
0.3 0.9 GO:0008883 glutamyl-tRNA reductase activity(GO:0008883)
0.3 5.6 GO:1900750 glutathione binding(GO:0043295) oligopeptide binding(GO:1900750)
0.3 1.1 GO:0005315 inorganic phosphate transmembrane transporter activity(GO:0005315)
0.3 1.6 GO:0016819 hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides(GO:0016819) adenylylsulfatase activity(GO:0047627)
0.3 3.3 GO:0031176 endo-1,4-beta-xylanase activity(GO:0031176)
0.3 5.1 GO:0005381 iron ion transmembrane transporter activity(GO:0005381)
0.3 1.3 GO:0004325 ferrochelatase activity(GO:0004325)
0.3 4.5 GO:0031418 L-ascorbic acid binding(GO:0031418)
0.3 1.0 GO:0019784 NEDD8-specific protease activity(GO:0019784)
0.3 2.1 GO:0070696 transmembrane receptor protein serine/threonine kinase binding(GO:0070696)
0.2 0.7 GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity(GO:0008534)
0.2 2.2 GO:0004096 catalase activity(GO:0004096)
0.2 10.2 GO:0004364 glutathione transferase activity(GO:0004364)
0.2 1.4 GO:0052691 UDP-arabinopyranose mutase activity(GO:0052691)
0.2 5.3 GO:0008143 poly(A) binding(GO:0008143)
0.2 3.4 GO:0019903 protein phosphatase binding(GO:0019903)
0.2 1.3 GO:0017057 6-phosphogluconolactonase activity(GO:0017057)
0.2 7.0 GO:0005179 hormone activity(GO:0005179)
0.2 1.0 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.2 4.2 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.2 4.3 GO:0052716 hydroquinone:oxygen oxidoreductase activity(GO:0052716)
0.2 2.7 GO:0004144 diacylglycerol O-acyltransferase activity(GO:0004144)
0.2 4.6 GO:0008066 glutamate receptor activity(GO:0008066)
0.2 3.1 GO:0019707 protein-cysteine S-palmitoyltransferase activity(GO:0019706) protein-cysteine S-acyltransferase activity(GO:0019707)
0.2 1.1 GO:0000062 fatty-acyl-CoA binding(GO:0000062)
0.2 2.4 GO:0004017 adenylate kinase activity(GO:0004017)
0.2 8.1 GO:0080044 quercetin 7-O-glucosyltransferase activity(GO:0080044)
0.2 1.8 GO:0008379 thioredoxin peroxidase activity(GO:0008379) peroxiredoxin activity(GO:0051920)
0.2 0.7 GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity(GO:0033925)
0.2 2.2 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.1 4.0 GO:0032934 sterol binding(GO:0032934)
0.1 10.4 GO:0015171 amino acid transmembrane transporter activity(GO:0015171)
0.1 1.4 GO:0002094 polyprenyltransferase activity(GO:0002094)
0.1 1.6 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.1 7.3 GO:0004683 calmodulin-dependent protein kinase activity(GO:0004683)
0.1 5.0 GO:0004707 MAP kinase activity(GO:0004707)
0.1 2.7 GO:0004713 protein tyrosine kinase activity(GO:0004713)
0.1 4.3 GO:0016762 xyloglucan:xyloglucosyl transferase activity(GO:0016762)
0.1 0.9 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.1 0.5 GO:0009882 blue light photoreceptor activity(GO:0009882)
0.1 0.6 GO:0003987 acetate-CoA ligase activity(GO:0003987)
0.1 4.0 GO:0015385 sodium:proton antiporter activity(GO:0015385)
0.1 6.1 GO:0001871 pattern binding(GO:0001871) polysaccharide binding(GO:0030247)
0.1 0.9 GO:0030976 thiamine pyrophosphate binding(GO:0030976)
0.1 0.6 GO:0047769 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 0.9 GO:0010385 double-stranded methylated DNA binding(GO:0010385)
0.1 1.9 GO:0005199 structural constituent of cell wall(GO:0005199)
0.1 12.0 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.1 5.8 GO:0019901 protein kinase binding(GO:0019901)
0.1 0.6 GO:0001046 core promoter sequence-specific DNA binding(GO:0001046) core promoter binding(GO:0001047)
0.1 3.1 GO:0033612 receptor serine/threonine kinase binding(GO:0033612)
0.1 6.3 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.1 1.8 GO:0097602 cullin family protein binding(GO:0097602)
0.1 32.3 GO:0004674 protein serine/threonine kinase activity(GO:0004674)
0.1 0.3 GO:0000340 RNA 7-methylguanosine cap binding(GO:0000340)
0.1 32.9 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.1 1.0 GO:0047635 L-alanine:2-oxoglutarate aminotransferase activity(GO:0004021) alanine-oxo-acid transaminase activity(GO:0047635)
0.1 0.7 GO:0043495 protein anchor(GO:0043495)
0.1 3.7 GO:0035091 phosphatidylinositol binding(GO:0035091)
0.1 0.5 GO:0015086 cadmium ion transmembrane transporter activity(GO:0015086)
0.1 1.5 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.1 10.2 GO:0003779 actin binding(GO:0003779)
0.1 1.3 GO:0003746 translation elongation factor activity(GO:0003746)
0.1 0.8 GO:0016688 L-ascorbate peroxidase activity(GO:0016688)
0.1 1.1 GO:0004332 fructose-bisphosphate aldolase activity(GO:0004332)
0.1 0.5 GO:0004605 phosphatidate cytidylyltransferase activity(GO:0004605)
0.1 0.5 GO:0004611 phosphoenolpyruvate carboxykinase activity(GO:0004611)
0.1 0.6 GO:0042299 lupeol synthase activity(GO:0042299)
0.1 0.3 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.1 2.1 GO:0004724 magnesium-dependent protein serine/threonine phosphatase activity(GO:0004724)
0.1 8.4 GO:0009055 electron carrier activity(GO:0009055)
0.1 3.7 GO:0003743 translation initiation factor activity(GO:0003743)
0.1 1.6 GO:0005385 zinc ion transmembrane transporter activity(GO:0005385)
0.1 1.0 GO:0003951 NAD+ kinase activity(GO:0003951)
0.1 3.7 GO:0004601 peroxidase activity(GO:0004601)
0.1 1.0 GO:0003887 DNA-directed DNA polymerase activity(GO:0003887)
0.0 3.6 GO:0042393 histone binding(GO:0042393)
0.0 0.2 GO:0031957 very long-chain fatty acid-CoA ligase activity(GO:0031957)
0.0 2.4 GO:0005096 GTPase activator activity(GO:0005096)
0.0 6.7 GO:0005507 copper ion binding(GO:0005507)
0.0 0.2 GO:0034511 U3 snoRNA binding(GO:0034511)
0.0 0.3 GO:0004470 malic enzyme activity(GO:0004470) malate dehydrogenase (decarboxylating) (NAD+) activity(GO:0004471)
0.0 1.3 GO:0033293 monocarboxylic acid binding(GO:0033293)
0.0 2.6 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.0 0.6 GO:0008375 acetylglucosaminyltransferase activity(GO:0008375)
0.0 0.3 GO:0016849 phosphorus-oxygen lyase activity(GO:0016849)
0.0 0.6 GO:0030515 snoRNA binding(GO:0030515)
0.0 0.3 GO:0005375 copper ion transmembrane transporter activity(GO:0005375)
0.0 0.3 GO:0008526 phosphatidylinositol transporter activity(GO:0008526)
0.0 0.7 GO:0017069 snRNA binding(GO:0017069)
0.0 0.5 GO:0004525 ribonuclease III activity(GO:0004525) double-stranded RNA-specific ribonuclease activity(GO:0032296)
0.0 0.7 GO:0019888 protein phosphatase regulator activity(GO:0019888)
0.0 1.3 GO:0030145 manganese ion binding(GO:0030145)
0.0 0.1 GO:0004365 glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity(GO:0004365) glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity(GO:0043891)
0.0 0.3 GO:0008169 C-methyltransferase activity(GO:0008169)
0.0 0.9 GO:0051540 iron-sulfur cluster binding(GO:0051536) metal cluster binding(GO:0051540)
0.0 0.6 GO:0016864 protein disulfide isomerase activity(GO:0003756) intramolecular oxidoreductase activity, transposing S-S bonds(GO:0016864)
0.0 2.0 GO:0051213 dioxygenase activity(GO:0051213)
0.0 1.3 GO:0005484 SNAP receptor activity(GO:0005484)
0.0 1.1 GO:0001159 core promoter proximal region sequence-specific DNA binding(GO:0000987) core promoter proximal region DNA binding(GO:0001159)
0.0 0.8 GO:0019900 kinase binding(GO:0019900)
0.0 0.9 GO:0004222 metalloendopeptidase activity(GO:0004222)
0.0 0.9 GO:0031072 heat shock protein binding(GO:0031072)
0.0 0.7 GO:0000156 phosphorelay response regulator activity(GO:0000156)
0.0 0.2 GO:0016207 4-coumarate-CoA ligase activity(GO:0016207)
0.0 0.1 GO:0016161 beta-amylase activity(GO:0016161)
0.0 0.1 GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor(GO:0016670)
0.0 0.1 GO:0002020 protease binding(GO:0002020)
0.0 0.3 GO:0051219 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.3 4.0 SIG CHEMOTAXIS Genes related to chemotaxis
0.5 2.7 PID ECADHERIN NASCENT AJ PATHWAY E-cadherin signaling in the nascent adherens junction
0.5 1.9 PID IL4 2PATHWAY IL4-mediated signaling events
0.3 2.4 PID P73PATHWAY p73 transcription factor network
0.3 2.2 PID MTOR 4PATHWAY mTOR signaling pathway
0.2 0.7 PID TAP63 PATHWAY Validated transcriptional targets of TAp63 isoforms
0.2 0.3 PID KIT PATHWAY Signaling events mediated by Stem cell factor receptor (c-Kit)
0.1 0.5 PID REG GR PATHWAY Glucocorticoid receptor regulatory network
0.0 0.1 PID IL2 PI3K PATHWAY IL2 signaling events mediated by PI3K

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
1.4 5.7 REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS Genes involved in Synthesis of bile acids and bile salts
0.5 3.7 REACTOME PYRUVATE METABOLISM AND CITRIC ACID TCA CYCLE Genes involved in Pyruvate metabolism and Citric Acid (TCA) cycle
0.4 4.0 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.4 1.7 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.4 1.1 REACTOME NEUROTRANSMITTER RECEPTOR BINDING AND DOWNSTREAM TRANSMISSION IN THE POSTSYNAPTIC CELL Genes involved in Neurotransmitter Receptor Binding And Downstream Transmission In The Postsynaptic Cell
0.3 1.8 REACTOME METABOLISM OF VITAMINS AND COFACTORS Genes involved in Metabolism of vitamins and cofactors
0.3 0.9 REACTOME MRNA DECAY BY 5 TO 3 EXORIBONUCLEASE Genes involved in mRNA Decay by 5' to 3' Exoribonuclease
0.2 1.9 REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES Genes involved in Metabolism of amino acids and derivatives
0.2 1.8 REACTOME PPARA ACTIVATES GENE EXPRESSION Genes involved in PPARA Activates Gene Expression
0.2 0.8 REACTOME MITOTIC PROMETAPHASE Genes involved in Mitotic Prometaphase
0.2 0.6 REACTOME HDL MEDIATED LIPID TRANSPORT Genes involved in HDL-mediated lipid transport
0.2 0.5 REACTOME PKB MEDIATED EVENTS Genes involved in PKB-mediated events
0.1 0.5 REACTOME GLUCONEOGENESIS Genes involved in Gluconeogenesis
0.1 0.7 REACTOME RESOLUTION OF AP SITES VIA THE MULTIPLE NUCLEOTIDE PATCH REPLACEMENT PATHWAY Genes involved in Resolution of AP sites via the multiple-nucleotide patch replacement pathway
0.1 0.5 REACTOME GLYCEROPHOSPHOLIPID BIOSYNTHESIS Genes involved in Glycerophospholipid biosynthesis
0.1 0.6 REACTOME PROTEIN FOLDING Genes involved in Protein folding
0.1 0.3 REACTOME SIGNALING BY SCF KIT Genes involved in Signaling by SCF-KIT
0.1 1.3 REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX Genes involved in Formation of the ternary complex, and subsequently, the 43S complex
0.1 0.2 REACTOME GLUTATHIONE CONJUGATION Genes involved in Glutathione conjugation
0.1 0.3 REACTOME GENERIC TRANSCRIPTION PATHWAY Genes involved in Generic Transcription Pathway
0.0 0.4 REACTOME ASPARAGINE N LINKED GLYCOSYLATION Genes involved in Asparagine N-linked glycosylation
0.0 0.2 REACTOME PI METABOLISM Genes involved in PI Metabolism