ISMARA results: AT4G22680

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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT4G22680

Z-value: 0.17

Transcription factors associated with AT4G22680

Gene Symbol	Gene ID	Gene Info
AT4G22680 TAIR	AT4G22680	myb domain protein 85

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
MYB85	arTal_v1_Chr4_-_11924230_11924230	-0.52	4.6e-03	Click!

Activity profile of AT4G22680 motif

Sorted Z-values of AT4G22680 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
arTal_v1_Chr4_-_10316886_10316886 Show fit	0.52	AT4G18780.1	IRX1 TAIR Show fit	cellulose synthase family protein
arTal_v1_Chr5_-_19838235_19838235 Show fit	0.40	AT5G48930.1	HCT TAIR Show fit	hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
arTal_v1_Chr1_-_19161552_19161552 Show fit	0.22	AT1G51680.3 AT1G51680.2	4CL1 TAIR Show fit	4-coumarate:CoA ligase 1
arTal_v1_Chr1_-_19161737_19161737 Show fit	0.21	AT1G51680.1	4CL1 TAIR Show fit	4-coumarate:CoA ligase 1
arTal_v1_Chr4_+_16310409_16310409 Show fit	0.21	AT4G34050.3	CCoAOMT1 TAIR Show fit	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
arTal_v1_Chr4_+_16310768_16310815 Show fit	0.21	AT4G34050.1 AT4G34050.2	CCoAOMT1 TAIR Show fit	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Showing 1 to 6 of 6 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G22680

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.1	0.5	GO:0010116	positive regulation of abscisic acid biosynthetic process(GO:0010116)
0.1	0.4	GO:0009805	coumarin biosynthetic process(GO:0009805)
0.0	0.4	GO:0009963	positive regulation of flavonoid biosynthetic process(GO:0009963)

Showing 1 to 3 of 3 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.5	GO:0016760	cellulose synthase (UDP-forming) activity(GO:0016760)
0.1	0.4	GO:0042409	caffeoyl-CoA O-methyltransferase activity(GO:0042409)
0.1	0.4	GO:0050734	hydroxycinnamoyltransferase activity(GO:0050734)
0.0	0.4	GO:0016207	4-coumarate-CoA ligase activity(GO:0016207)

Showing 1 to 4 of 4 entries