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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT4G21030

Z-value: 0.86

Transcription factors associated with AT4G21030

Gene Symbol Gene ID Gene Info
AT4G21030
AT4G21030 Dof-type zinc finger domain-containing protein

Activity profile of AT4G21030 motif

Sorted Z-values of AT4G21030 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr3_-_4762457 4.23 AT3G14280.1
AT3G14280
LL-diaminopimelate aminotransferase
Chr4_+_10974456 4.10 AT4G20320.2
AT4G20320.4
AT4G20320.3
AT4G20320.1
AT4G20320.5
AT4G20320.6
AT4G20320
CTP synthase family protein
Chr3_-_7576623 3.83 AT3G21500.1
AT3G21500.3
AT3G21500.2
DXPS1
1-deoxy-D-xylulose 5-phosphate synthase 1
Chr5_-_23281271 3.01 AT5G57480.1
AT5G57480
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr4_+_11655562 2.92 AT4G21980.1
AT4G21980.2
APG8A
Ubiquitin-like superfamily protein
Chr5_-_5759817 2.90 AT5G17460.3
AT5G17460.2
AT5G17460.1
AT5G17460
glutamyl-tRNA (Gln) amidotransferase subunit C
Chr2_-_12629640 2.90 AT2G29470.1
GSTU3
glutathione S-transferase tau 3
Chr1_+_2867203 2.79 AT1G08920.1
AT1G08920.2
AT1G08920.3
ESL1
ERD (early response to dehydration) six-like 1
Chr2_-_13549571 2.72 AT2G31865.3
AT2G31865.1
AT2G31865.2
PARG2
poly(ADP-ribose) glycohydrolase 2
Chr4_-_11585391 2.60 AT4G21830.2
MSRB7
methionine sulfoxide reductase B7
Chr1_-_2282828 2.50 AT1G07430.1
HAI2
highly ABA-induced PP2C protein 2
Chr4_-_11585542 2.47 AT4G21830.1
MSRB7
methionine sulfoxide reductase B7
Chr3_-_7978635 2.27 AT3G22530.1
AT3G22530
heat shock protein
Chr4_-_10714745 2.27 AT4G19700.1
RING
SBP (S-ribonuclease binding protein) family protein
Chr5_+_16297465 2.23 AT5G40720.1
AT5G40720.3
AT5G40720
C3H4 type zinc finger protein (DUF23)
Chr3_-_22915393 2.18 AT3G61890.1
HB-12
homeobox 12
Chr1_+_5638779 2.18 AT1G16500.1
AT1G16500
filamentous hemagglutinin transporter
Chr5_+_15634444 2.18 AT5G39050.1
PMAT1
HXXXD-type acyl-transferase family protein
Chr5_+_21534473 2.12 AT5G53120.6
AT5G53120.1
AT5G53120.2
SPDS3
spermidine synthase 3
Chr3_+_18365678 2.09 AT3G49540.1
AT3G49540
hypothetical protein
Chr5_+_21534766 2.04 AT5G53120.7
AT5G53120.3
SPDS3
spermidine synthase 3
Chr2_-_8329944 2.01 AT2G19190.1
FRK1
FLG22-induced receptor-like kinase 1
Chr5_+_16297300 2.00 AT5G40720.2
AT5G40720
C3H4 type zinc finger protein (DUF23)
Chr5_-_270646 1.98 AT5G01720.1
AT5G01720
RNI-like superfamily protein
Chr1_-_20563269 1.97 AT1G55110.2
AT1G55110.1
AT1G55110.3
IDD7
indeterminate(ID)-domain 7
Chr2_+_6653663 1.95 AT2G15310.1
ARFB1A
ADP-ribosylation factor B1A
Chr1_-_498539 1.93 AT1G02450.1
NIMIN1
NIM1-interacting 1
Chr1_-_20784017 1.92 AT1G55610.2
AT1G55610.1
BRL1
BRI1 like
Chr5_+_21535260 1.87 AT5G53120.5
SPDS3
spermidine synthase 3
Chr5_-_19163918 1.85 AT5G47180.2
AT5G47180.1
AT5G47180
Plant VAMP (vesicle-associated membrane protein) family protein
Chr5_+_21535059 1.85 AT5G53120.4
SPDS3
spermidine synthase 3
Chr4_-_386479 1.83 AT4G00900.2
ECA2
ER-type Ca2+-ATPase 2
Chr1_-_27749248 1.82 AT1G73805.1
SARD1
Calmodulin binding protein-like protein
Chr4_-_386850 1.80 AT4G00900.1
ECA2
ER-type Ca2+-ATPase 2
Chr3_-_20606650 1.79 AT3G55560.1
AGF2
AT-hook protein of GA feedback 2
Chr2_-_11685342 1.73 AT2G27310.1
AT2G27310
F-box family protein
Chr1_-_10184512 1.72 AT1G29160.1
AT1G29160
Dof-type zinc finger DNA-binding family protein
Chr5_+_2345758 1.71 AT5G07410.1
AT5G07410
Pectin lyase-like superfamily protein
Chr5_-_24083528 1.70 AT5G59780.2
AT5G59780.1
AT5G59780.3
MYB59
myb domain protein 59
Chr5_-_1935840 1.69 AT5G06330.1
AT5G06330
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr5_+_5087219 1.66 AT5G15640.1
AT5G15640.2
AT5G15640
Mitochondrial substrate carrier family protein
Chr5_-_6338209 1.65 AT5G18980.1
AT5G18980.2
AT5G18980
ARM repeat superfamily protein
Chr5_+_20949291 1.60 AT5G51570.1
AT5G51570
SPFH/Band 7/PHB domain-containing membrane-associated protein family
Chr4_+_12414058 1.58 AT4G23870.1
AT4G23870
hypothetical protein
Chr4_-_1197630 1.58 AT4G02710.1
NET1C
Kinase interacting (KIP1-like) family protein
Chr4_-_15527926 1.52 AT4G32150.1
VAMP711
vesicle-associated membrane protein 711
Chr3_+_15367546 1.50 AT3G43440.1
AT3G43440.2
JAZ11
jasmonate-zim-domain protein 11
Chr4_-_1140491 1.47 AT4G02590.2
AT4G02590.3
AT4G02590.1
UNE12
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr2_-_12515947 1.44 AT2G29120.1
GLR2.7
glutamate receptor 2.7
Chr3_+_4642657 1.44 AT3G14020.2
NF-YA6
nuclear factor Y, subunit A6
Chr2_-_9767 1.43 AT2G01023.1
AT2G01023
hypothetical protein
Chr3_+_22009008 1.43 AT3G59580.2
AT3G59580.1
AT3G59580.3
AT3G59580
Plant regulator RWP-RK family protein
Chr4_+_12431097 1.38 AT4G23920.1
UGE2
UDP-D-glucose/UDP-D-galactose 4-epimerase 2
Chr3_-_17202074 1.37 AT3G46700.1
AT3G46700
UDP-Glycosyltransferase superfamily protein
Chr1_-_26415258 1.37 AT1G70140.1
FH8
formin 8
Chr4_+_5792137 1.35 AT4G09030.1
AGP10
arabinogalactan protein 10
Chr4_+_17305758 1.34 AT4G36710.1
HAM4
GRAS family transcription factor
Chr5_+_4286740 1.33 AT5G13370.1
AT5G13370
Auxin-responsive GH3 family protein
Chr4_+_14129180 1.33 AT4G28600.2
AT4G28600.3
AT4G28600.1
NPGR2
no pollen germination related 2
Chr4_+_17768042 1.33 AT4G37790.1
HAT22
Homeobox-leucine zipper protein family
Chr3_+_4641930 1.33 AT3G14020.1
NF-YA6
nuclear factor Y, subunit A6
Chr5_+_19868926 1.32 AT5G49015.2
AT5G49015.1
AT5G49015.3
AT5G49015
Expressed protein
Chr1_-_18667677 1.32 AT1G50390.1
AT1G50390
pfkB-like carbohydrate kinase family protein
Chr3_+_22039476 1.32 AT3G59670.1
AT3G59670
elongation factor
Chr1_+_3252317 1.32 AT1G09970.2
LRR XI-23
Leucine-rich receptor-like protein kinase family protein
Chr1_-_5782433 1.31 AT1G16900.1
EBS3
Alg9-like mannosyltransferase family
Chr5_-_1931782 1.31 AT5G06320.1
NHL3
NDR1/HIN1-like 3
Chr1_+_3252098 1.31 AT1G09970.1
LRR XI-23
Leucine-rich receptor-like protein kinase family protein
Chr5_-_6337124 1.30 AT5G18980.3
AT5G18980
ARM repeat superfamily protein
Chr3_+_2510570 1.30 AT3G07870.1
AT3G07870
F-box and associated interaction domains-containing protein
Chr5_+_26180421 1.29 AT5G65495.1
AT5G65495
hypothetical protein
Chr2_+_17915448 1.29 AT2G43080.1
AT2G43080.2
AT-P4H-1
P4H isoform 1
Chr1_-_3550848 1.25 AT1G10690.1
AT1G10690
cyclin-dependent kinase inhibitor
Chr2_-_8370675 1.23 AT2G19310.1
AT2G19310
HSP20-like chaperones superfamily protein
Chr2_-_10137595 1.21 AT2G23810.1
TET8
tetraspanin8
Chr1_-_2621545 1.21 AT1G08315.1
AT1G08315
ARM repeat superfamily protein
Chr4_+_10217338 1.21 AT4G18530.1
AT4G18530.2
AT4G18530
lysine ketoglutarate reductase trans-splicing-like protein, putative (DUF707)
Chr5_+_15878698 1.20 AT5G39660.1
AT5G39660.3
AT5G39660.2
CDF2
cycling DOF factor 2
Chr3_+_22635803 1.19 AT3G61160.3
AT3G61160.6
AT3G61160.5
AT3G61160.4
AT3G61160.2
AT3G61160.1
AT3G61160
Protein kinase superfamily protein
Chr4_+_12488040 1.18 AT4G24040.1
TRE1
trehalase 1
Chr3_-_6416591 1.17 AT3G18640.2
AT3G18640.1
AT3G18640
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr5_+_26926551 1.15 AT5G67470.1
FH6
formin homolog 6
Chr5_-_22133688 1.14 AT5G54510.1
DFL1
Auxin-responsive GH3 family protein
Chr2_+_11985687 1.14 AT2G28120.1
AT2G28120
Major facilitator superfamily protein
Chr3_-_23018509 1.13 AT3G62170.1
VGDH2
VANGUARD-like protein
Chr5_+_21965667 1.12 AT5G54140.1
ILL3
IAA-leucine-resistant (ILR1)-like 3
Chr4_+_145887 1.12 AT4G00335.3
AT4G00335.1
AT4G00335.2
RHB1A
RING-H2 finger B1A
Chr5_-_23435266 1.10 AT5G57840.1
AT5G57840
HXXXD-type acyl-transferase family protein
Chr4_-_9360155 1.10 AT4G16620.2
AT4G16620.3
AT4G16620.1
UMAMIT8
nodulin MtN21 /EamA-like transporter family protein
Chr4_+_10370433 1.09 AT4G18930.1
AT4G18930
RNA ligase/cyclic nucleotide phosphodiesterase family protein
Chr1_+_29656430 1.09 AT1G78890.1
AT1G78890.2
AT1G78890
hypothetical protein
Chr3_+_20310269 1.08 AT3G54826.1
ZR3
Zim17-type zinc finger protein
Chr4_+_10218137 1.08 AT4G18530.3
AT4G18530
lysine ketoglutarate reductase trans-splicing-like protein, putative (DUF707)
Chr2_-_17438168 1.07 AT2G41800.1
AT2G41800
imidazolonepropionase (Protein of unknown function, DUF642)
Chr5_-_20139529 1.07 AT5G49620.2
AT5G49620.1
MYB78
myb domain protein 78
Chr4_+_8814736 1.06 AT4G15410.1
PUX5
serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma
Chr1_-_11801407 1.05 AT1G32640.1
MYC2
Basic helix-loop-helix (bHLH) DNA-binding family protein
Chr1_+_28041146 1.05 AT1G74650.1
AT1G74650.2
AT1G74650.3
MYB31
myb domain protein 31
Chr3_-_6416394 1.03 AT3G18640.3
AT3G18640
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr1_-_4503543 1.01 AT1G13195.2
AT1G13195.1
AT1G13195
RING/U-box superfamily protein
Chr5_+_17324909 1.01 AT5G43150.1
AT5G43150
elongation factor
Chr3_+_19429686 1.00 AT3G52420.1
OEP7
outer envelope membrane protein 7
Chr5_-_6038106 0.98 AT5G18260.1
AT5G18260
RING/U-box superfamily protein
Chr5_-_24456115 0.98 AT5G60790.1
ABCF1
ABC transporter family protein
Chr2_+_6849452 0.98 AT2G15730.1
AT2G15730.2
AT2G15730
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr3_+_5208559 0.97 AT3G15430.2
AT3G15430.3
AT3G15430.5
AT3G15430.4
AT3G15430
Regulator of chromosome condensation (RCC1) family protein
Chr1_-_18184583 0.96 AT1G49170.1
AT1G49170
hypothetical protein
Chr1_+_1832941 0.96 AT1G06060.1
AT1G06060.2
AT1G06060
LisH and RanBPM domains containing protein
Chr1_-_363142 0.95 AT1G02060.1
AT1G02060
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr2_-_15144182 0.95 AT2G36060.2
AT2G36060.3
AT2G36060.1
MMZ3
MMS ZWEI homologue 3
Chr1_-_706630 0.94 AT1G03040.2
AT1G03040.3
AT1G03040.1
AT1G03040
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr2_-_5610324 0.93 AT2G13463.1
AT2G13463
hypothetical protein
Chr5_-_26644738 0.93 AT5G66730.1
IDD1
C2H2-like zinc finger protein
Chr3_-_856643 0.92 AT3G03560.1
AT3G03560
hypothetical protein
Chr2_+_5951823 0.92 AT2G14110.1
AT2G14110.2
AT2G14110
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Chr5_-_7022113 0.92 AT5G20730.3
AT5G20730.1
AT5G20730.2
NPH4
Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein
Chr5_+_2533581 0.91 AT5G07940.4
AT5G07940.1
AT5G07940.3
AT5G07940.5
AT5G07940.2
AT5G07940
dentin sialophosphoprotein-like protein
Chr4_+_15028380 0.90 AT4G30870.1
MUS81
Restriction endonuclease, type II-like superfamily protein
Chr5_-_629280 0.90 AT5G02770.1
MOS11
Protein MODIFIER OF SNC1 11
Chr1_+_18310428 0.90 AT1G49470.1
AT1G49470
transmembrane epididymal protein (DUF716)
Chr2_+_18682081 0.89 AT2G45310.1
GAE4
UDP-D-glucuronate 4-epimerase 4
Chr4_+_17451637 0.89 AT4G37030.1
AT4G37030
membrane protein
Chr3_+_5208938 0.89 AT3G15430.1
AT3G15430.6
AT3G15430
Regulator of chromosome condensation (RCC1) family protein
Chr3_-_4330218 0.89 AT3G13330.1
PA200
proteasome activating protein 200
Chr4_+_8823725 0.86 AT4G15420.1
AT4G15420
Ubiquitin fusion degradation UFD1 family protein
Chr1_-_11856765 0.86 AT1G32750.1
HAF01
HAC13 protein (HAC13)
Chr1_-_9286395 0.86 AT1G26800.1
AT1G26800
RING/U-box superfamily protein
Chr5_+_6378149 0.86 AT5G19080.1
LUL3
RING/U-box superfamily protein
Chr1_+_25693449 0.85 AT1G68490.1
AT1G68490
translocase subunit seca
Chr3_-_2113436 0.85 AT3G06670.1
AT3G06670
binding protein
Chr4_-_18563981 0.85 AT4G40050.2
AT4G40050.1
AT4G40050
signal transducer, putative (DUF3550/UPF0682)
Chr4_+_8823402 0.85 AT4G15420.2
AT4G15420
Ubiquitin fusion degradation UFD1 family protein
Chr1_-_29002135 0.83 AT1G77180.1
AT1G77180.3
AT1G77180.2
SKIP
chromatin protein family
Chr3_-_6716178 0.83 AT3G19380.1
PUB25
plant U-box 25
Chr3_-_2113698 0.82 AT3G06670.2
AT3G06670
binding protein
Chr1_+_10491975 0.82 AT1G29950.2
AT1G29950
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_+_9815500 0.82 AT5G27720.1
emb1644
Small nuclear ribonucleoprotein family protein
Chr3_-_22804104 0.81 AT3G61620.2
RRP41
3'-5'-exoribonuclease family protein
Chr1_+_10491698 0.81 AT1G29950.1
AT1G29950
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_+_22817480 0.80 AT5G56340.1
ATCRT1
RING/U-box superfamily protein
Chr1_-_23429603 0.80 AT1G63180.2
AT1G63180.1
UGE3
UDP-D-glucose/UDP-D-galactose 4-epimerase 3
Chr4_-_10090276 0.80 AT4G18250.1
AT4G18250
receptor Serine/Threonine kinase-like protein
Chr2_-_10905267 0.80 AT2G25620.2
AT2G25620.1
DBP1
DNA-binding protein phosphatase 1
Chr2_+_432195 0.80 AT2G01940.1
AT2G01940.3
SGR5
C2H2-like zinc finger protein
Chr5_-_5829755 0.78 AT5G17690.1
AT5G17690.3
AT5G17690.2
TFL2
like heterochromatin protein (LHP1)
Chr5_+_25613258 0.78 AT5G63990.2
AT5G63990
Inositol monophosphatase family protein
Chr4_+_9012552 0.78 AT4G15880.2
AT4G15880.1
ESD4
Cysteine proteinases superfamily protein
Chr1_+_5933780 0.78 AT1G17340.1
AT1G17340
Phosphoinositide phosphatase family protein
Chr1_-_11544166 0.77 AT1G32090.1
AT1G32090
early-responsive to dehydration stress protein (ERD4)
Chr5_-_10543558 0.77 AT5G28540.1
BIP1
heat shock protein 70 (Hsp 70) family protein
Chr5_-_10943378 0.77 AT5G28920.1
AT5G28920
hypothetical protein
Chr1_+_19181031 0.77 AT1G51720.4
AT1G51720.3
AT1G51720
Amino acid dehydrogenase family protein
Chr2_+_6850043 0.77 AT2G15730.3
AT2G15730
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Chr5_+_20650086 0.77 AT5G50780.2
AT5G50780.3
AT5G50780.1
AT5G50780
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
Chr1_+_19180744 0.76 AT1G51720.1
AT1G51720.2
AT1G51720
Amino acid dehydrogenase family protein
Chr4_+_16521861 0.75 AT4G34590.1
GBF6
G-box binding factor 6
Chr1_+_4153641 0.75 AT1G12240.1
ATBETAFRUCT4
Glycosyl hydrolases family 32 protein
Chr1_-_931985 0.74 AT1G03730.1
AT1G03730
pyrroline-5-carboxylate reductase
Chr5_+_25613096 0.74 AT5G63990.1
AT5G63990
Inositol monophosphatase family protein
Chr2_-_18035182 0.74 AT2G43420.1
AT2G43420
3-beta hydroxysteroid dehydrogenase/isomerase family protein
Chr1_+_11479763 0.74 AT1G31970.1
STRS1
DEA(D/H)-box RNA helicase family protein
Chr2_+_15050677 0.73 AT2G35820.1
AT2G35820
ureidoglycolate hydrolase
Chr3_-_22803192 0.72 AT3G61620.1
RRP41
3'-5'-exoribonuclease family protein
Chr2_+_15050498 0.72 AT2G35820.2
AT2G35820
ureidoglycolate hydrolase
Chr3_+_7567565 0.71 AT3G21480.1
AT3G21480
BRCT domain-containing DNA repair protein
Chr3_-_596496 0.71 AT3G02750.1
AT3G02750.2
AT3G02750
Protein phosphatase 2C family protein
Chr3_+_5500054 0.70 AT3G16230.1
AT3G16230.6
AT3G16230.5
AT3G16230.4
AT3G16230.8
AT3G16230.9
AT3G16230.10
AT3G16230.7
AT3G16230.3
AT3G16230.2
AT3G16230
Putative eukaryotic LigT
Chr3_-_8668040 0.70 AT3G23980.1
BLI
BLISTER
Chr5_+_24147099 0.70 AT5G59980.1
AT5G59980.2
AT5G59980.3
AT5G59980.4
GAF1
Polymerase/histidinol phosphatase-like protein
Chr4_+_17904532 0.70 AT4G38170.1
FRS9
FAR1-related sequence 9
Chr4_-_916509 0.70 AT4G02075.2
AT4G02075.3
AT4G02075.1
PIT1
RING/FYVE/PHD zinc finger superfamily protein
Chr3_-_595755 0.70 AT3G02750.3
AT3G02750
Protein phosphatase 2C family protein
Chr3_-_1192659 0.69 AT3G04470.1
AT3G04470
Ankyrin repeat family protein
Chr4_+_17668951 0.69 AT4G37608.1
AT4G37608.2
AT4G37608
hypothetical protein
Chr5_-_19790372 0.69 AT5G48810.1
CB5-D
cytochrome B5 isoform D
Chr2_+_15235487 0.68 AT2G36340.1
AT2G36340
DNA-binding storekeeper protein-related transcriptional regulator
Chr1_+_27308513 0.68 AT1G72520.1
LOX4
PLAT/LH2 domain-containing lipoxygenase family protein
Chr5_-_21362160 0.67 AT5G52660.1
AT5G52660.2
AT5G52660
Homeodomain-like superfamily protein
Chr3_-_2067417 0.67 AT3G06620.1
AT3G06620
PAS domain-containing protein tyrosine kinase family protein
Chr2_+_6733534 0.67 AT2G15430.2
AT2G15430.1
AT2G15430.3
NRPB3
DNA-directed RNA polymerase family protein
Chr5_+_3553096 0.67 AT5G11170.2
AT5G11170.1
UAP56a
DEAD/DEAH box RNA helicase family protein
Chr1_+_28631223 0.66 AT1G76320.2
AT1G76320.3
AT1G76320.4
AT1G76320.1
FRS4
FAR1-related sequence 4
Chr4_-_5380618 0.66 AT4G08460.2
AT4G08460.4
AT4G08460
hypothetical protein (DUF1644)
Chr4_-_8879327 0.66 AT4G15550.1
IAGLU
indole-3-acetate beta-D-glucosyltransferase
Chr3_+_2618074 0.65 AT3G08620.2
AT3G08620
RNA-binding KH domain-containing protein
Chr4_-_5380882 0.65 AT4G08460.3
AT4G08460.1
AT4G08460
hypothetical protein (DUF1644)
Chr1_-_10382153 0.64 AT1G29690.1
CAD1
MAC/Perforin domain-containing protein
Chr1_-_18439115 0.63 AT1G49800.1
AT1G49800
transmembrane protein
Chr1_+_29012674 0.62 AT1G77220.2
AT1G77220.1
AT1G77220
organic solute transporter ostalpha protein (DUF300)
Chr5_+_26308220 0.62 AT5G65760.1
AT5G65760
Serine carboxypeptidase S28 family protein
Chr3_+_2617707 0.62 AT3G08620.1
AT3G08620
RNA-binding KH domain-containing protein
Chr3_+_649814 0.61 AT3G02910.1
AT3G02910
AIG2-like (avirulence induced gene) family protein
Chr1_+_19996205 0.61 AT1G53590.1
NTMC2T6.1
Calcium-dependent lipid-binding (CaLB domain) family protein
Chr1_-_29117344 0.61 AT1G77480.2
AT1G77480.1
AT1G77480
Eukaryotic aspartyl protease family protein
Chr4_+_10633619 0.61 AT4G19510.3
AT4G19510.4
AT4G19510.5
AT4G19510.6
AT4G19510.8
AT4G19510.7
AT4G19510.9
AT4G19510.1
AT4G19510.10
AT4G19510.2
AT4G19510
Disease resistance protein (TIR-NBS-LRR class)
Chr1_+_23082036 0.61 AT1G62380.1
ACO2
ACC oxidase 2
Chr1_-_23352645 0.61 AT1G63010.2
AT1G63010.3
AT1G63010.5
AT1G63010.4
AT1G63010
Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein
Chr1_-_6092018 0.60 AT1G17710.2
AT1G17710.1
PEPC1
Pyridoxal phosphate phosphatase-related protein
Chr3_-_2244820 0.60 AT3G07090.2
AT3G07090.1
AT3G07090
PPPDE putative thiol peptidase family protein
Chr1_-_20343554 0.59 AT1G54460.1
AT1G54460
TPX2 (targeting protein for Xklp2) protein family

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G21030

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
1.1 7.9 GO:0006597 spermine biosynthetic process(GO:0006597)
0.6 2.5 GO:0048838 release of seed from dormancy(GO:0048838) exit from dormancy(GO:0097438) negative regulation of seed maturation(GO:2000692)
0.5 3.3 GO:0006000 fructose metabolic process(GO:0006000)
0.5 5.1 GO:0000304 response to singlet oxygen(GO:0000304)
0.4 1.7 GO:0035865 cellular response to potassium ion(GO:0035865)
0.3 1.2 GO:0010606 positive regulation of cytoplasmic mRNA processing body assembly(GO:0010606)
0.3 1.3 GO:0009590 detection of gravity(GO:0009590)
0.3 1.1 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.3 1.1 GO:0043618 regulation of transcription from RNA polymerase II promoter in response to stress(GO:0043618)
0.3 0.8 GO:0045857 regulation of molecular function, epigenetic(GO:0040030) negative regulation of molecular function, epigenetic(GO:0045857)
0.3 1.8 GO:0071219 cellular response to molecule of bacterial origin(GO:0071219)
0.3 1.5 GO:0006537 glutamate biosynthetic process(GO:0006537)
0.2 0.9 GO:1902914 regulation of protein polyubiquitination(GO:1902914) positive regulation of protein polyubiquitination(GO:1902916)
0.2 2.8 GO:0015749 monosaccharide transport(GO:0015749)
0.2 2.8 GO:0010262 somatic embryogenesis(GO:0010262)
0.2 2.3 GO:0052548 negative regulation of endopeptidase activity(GO:0010951) regulation of endopeptidase activity(GO:0052548)
0.2 0.9 GO:0031573 intra-S DNA damage checkpoint(GO:0031573)
0.2 1.9 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.2 0.5 GO:0017145 stem cell division(GO:0017145)
0.2 1.1 GO:0009187 cyclic nucleotide metabolic process(GO:0009187)
0.2 0.6 GO:0009727 detection of ethylene stimulus(GO:0009727)
0.1 1.1 GO:0009939 positive regulation of gibberellic acid mediated signaling pathway(GO:0009939)
0.1 1.5 GO:0071051 polyadenylation-dependent snoRNA 3'-end processing(GO:0071051)
0.1 0.6 GO:0046938 phytochelatin metabolic process(GO:0046937) phytochelatin biosynthetic process(GO:0046938) cellular response to cadmium ion(GO:0071276) cellular detoxification of cadmium ion(GO:0098849)
0.1 0.5 GO:0046146 tetrahydrobiopterin biosynthetic process(GO:0006729) tetrahydrobiopterin metabolic process(GO:0046146)
0.1 0.4 GO:0009945 radial axis specification(GO:0009945)
0.1 1.3 GO:0006490 oligosaccharide-lipid intermediate biosynthetic process(GO:0006490)
0.1 2.7 GO:0006282 regulation of DNA repair(GO:0006282)
0.1 0.3 GO:0045694 regulation of embryo sac egg cell differentiation(GO:0045694)
0.1 1.9 GO:0010112 regulation of systemic acquired resistance(GO:0010112)
0.1 0.3 GO:0015904 tetracycline transport(GO:0015904) antibiotic transport(GO:0042891)
0.1 5.1 GO:0006874 cellular calcium ion homeostasis(GO:0006874)
0.1 0.4 GO:0046477 glycosylceramide metabolic process(GO:0006677) glucosylceramide metabolic process(GO:0006678) glucosylceramide catabolic process(GO:0006680) glycosphingolipid metabolic process(GO:0006687) glycolipid catabolic process(GO:0019377) glycosylceramide catabolic process(GO:0046477) glycosphingolipid catabolic process(GO:0046479) ceramide catabolic process(GO:0046514)
0.1 0.8 GO:0016926 protein desumoylation(GO:0016926)
0.1 1.3 GO:0018401 protein hydroxylation(GO:0018126) peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) 4-hydroxyproline metabolic process(GO:0019471) peptidyl-proline hydroxylation(GO:0019511)
0.1 1.2 GO:0050829 defense response to Gram-negative bacterium(GO:0050829)
0.1 1.5 GO:0046855 inositol phosphate dephosphorylation(GO:0046855) inositol phosphate catabolic process(GO:0071545)
0.1 0.2 GO:0015742 alpha-ketoglutarate transport(GO:0015742)
0.1 0.2 GO:0035019 somatic stem cell population maintenance(GO:0035019)
0.1 1.1 GO:1902074 response to salt(GO:1902074)
0.1 0.4 GO:0009263 deoxyribonucleotide biosynthetic process(GO:0009263)
0.1 1.2 GO:0046352 disaccharide catabolic process(GO:0046352)
0.1 2.2 GO:0006012 galactose metabolic process(GO:0006012)
0.1 0.8 GO:0050688 regulation of immune effector process(GO:0002697) regulation of defense response to virus(GO:0050688)
0.1 2.9 GO:0006914 autophagy(GO:0006914)
0.1 0.3 GO:0080121 AMP transport(GO:0080121)
0.1 0.9 GO:0016973 poly(A)+ mRNA export from nucleus(GO:0016973)
0.1 0.2 GO:0010372 positive regulation of gibberellin biosynthetic process(GO:0010372)
0.1 0.9 GO:0030522 blue light signaling pathway(GO:0009785) intracellular receptor signaling pathway(GO:0030522)
0.1 0.9 GO:0009937 regulation of gibberellic acid mediated signaling pathway(GO:0009937)
0.1 3.8 GO:0015995 chlorophyll biosynthetic process(GO:0015995)
0.1 0.7 GO:0080086 stamen filament development(GO:0080086)
0.1 0.8 GO:0033962 cytoplasmic mRNA processing body assembly(GO:0033962)
0.1 0.8 GO:0010555 response to mannitol(GO:0010555)
0.1 2.5 GO:0006749 glutathione metabolic process(GO:0006749)
0.1 1.1 GO:0050821 protein stabilization(GO:0050821)
0.1 0.9 GO:0051123 RNA polymerase II transcriptional preinitiation complex assembly(GO:0051123)
0.0 0.4 GO:0006183 GTP biosynthetic process(GO:0006183)
0.0 0.4 GO:0042128 nitrate metabolic process(GO:0042126) nitrate assimilation(GO:0042128)
0.0 3.9 GO:0009615 response to virus(GO:0009615)
0.0 0.2 GO:0080119 ER body organization(GO:0080119)
0.0 1.4 GO:0045010 positive regulation of actin filament polymerization(GO:0030838) actin nucleation(GO:0045010)
0.0 0.6 GO:0051262 protein tetramerization(GO:0051262)
0.0 1.5 GO:0048506 regulation of timing of meristematic phase transition(GO:0048506) regulation of timing of transition from vegetative to reproductive phase(GO:0048510)
0.0 0.4 GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity(GO:0045736) negative regulation of cyclin-dependent protein kinase activity(GO:1904030)
0.0 0.7 GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic(GO:0090502)
0.0 0.7 GO:0048826 cotyledon morphogenesis(GO:0048826)
0.0 0.8 GO:0042026 protein refolding(GO:0042026)
0.0 0.7 GO:0010375 stomatal complex patterning(GO:0010375)
0.0 0.3 GO:0018344 protein geranylgeranylation(GO:0018344)
0.0 0.7 GO:0080022 primary root development(GO:0080022)
0.0 0.4 GO:0043967 histone H4 acetylation(GO:0043967)
0.0 0.9 GO:0010499 proteasomal ubiquitin-independent protein catabolic process(GO:0010499)
0.0 0.5 GO:0010152 pollen maturation(GO:0010152)
0.0 0.5 GO:0015780 nucleotide-sugar transport(GO:0015780)
0.0 1.1 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.0 0.5 GO:0046834 lipid phosphorylation(GO:0046834) phosphatidylinositol phosphorylation(GO:0046854)
0.0 1.3 GO:0000381 regulation of alternative mRNA splicing, via spliceosome(GO:0000381)
0.0 0.4 GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter(GO:0032968)
0.0 2.7 GO:0009845 seed germination(GO:0009845)
0.0 1.1 GO:0009850 auxin metabolic process(GO:0009850)
0.0 0.4 GO:0045927 positive regulation of growth(GO:0045927)
0.0 1.3 GO:0009735 response to cytokinin(GO:0009735)
0.0 0.8 GO:0009744 response to sucrose(GO:0009744)
0.0 1.9 GO:0006470 protein dephosphorylation(GO:0006470)
0.0 1.4 GO:0010118 stomatal movement(GO:0010118)
0.0 0.6 GO:0006997 nucleus organization(GO:0006997)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
1.0 2.9 GO:0005775 vacuolar lumen(GO:0005775)
0.2 0.8 GO:0034663 endoplasmic reticulum chaperone complex(GO:0034663)
0.2 1.2 GO:1990124 messenger ribonucleoprotein complex(GO:1990124)
0.2 0.9 GO:0048476 Holliday junction resolvase complex(GO:0048476)
0.2 0.7 GO:0030681 nucleolar ribonuclease P complex(GO:0005655) multimeric ribonuclease P complex(GO:0030681)
0.1 2.8 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.1 0.9 GO:0031372 ubiquitin conjugating enzyme complex(GO:0031371) UBC13-MMS2 complex(GO:0031372)
0.1 1.5 GO:0000176 nuclear exosome (RNase complex)(GO:0000176)
0.1 0.8 GO:0000791 euchromatin(GO:0000791)
0.1 0.8 GO:0005688 U6 snRNP(GO:0005688)
0.1 1.2 GO:0031358 intrinsic component of plastid outer membrane(GO:0031354) integral component of plastid outer membrane(GO:0031355) intrinsic component of chloroplast outer membrane(GO:0031358) integral component of chloroplast outer membrane(GO:0031359)
0.1 0.6 GO:0030014 CCR4-NOT complex(GO:0030014)
0.0 0.3 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.0 0.9 GO:0005669 transcription factor TFIID complex(GO:0005669)
0.0 0.7 GO:0000418 DNA-directed RNA polymerase IV complex(GO:0000418)
0.0 1.3 GO:0000137 Golgi cis cisterna(GO:0000137)
0.0 0.2 GO:0010168 ER body(GO:0010168)
0.0 2.2 GO:0000138 Golgi trans cisterna(GO:0000138)
0.0 2.8 GO:0009705 plant-type vacuole membrane(GO:0009705)
0.0 1.5 GO:0005819 spindle(GO:0005819)
0.0 0.4 GO:0000307 cyclin-dependent protein kinase holoenzyme complex(GO:0000307)
0.0 0.7 GO:0000325 plant-type vacuole(GO:0000325)
0.0 0.5 GO:0005764 lysosome(GO:0005764)
0.0 6.0 GO:0005774 vacuolar membrane(GO:0005774)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
1.6 7.9 GO:0016768 spermine synthase activity(GO:0016768)
1.3 3.8 GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity(GO:0008661)
1.0 2.9 GO:0019779 Atg8 ligase activity(GO:0019776) Atg8 activating enzyme activity(GO:0019779)
0.7 2.2 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.5 5.1 GO:0008113 peptide-methionine (S)-S-oxide reductase activity(GO:0008113)
0.3 3.3 GO:0008865 fructokinase activity(GO:0008865)
0.3 2.6 GO:0001653 peptide receptor activity(GO:0001653)
0.3 1.5 GO:0004441 inositol-1,4-bisphosphate 1-phosphatase activity(GO:0004441)
0.3 0.9 GO:0016504 peptidase activator activity(GO:0016504)
0.3 1.1 GO:0050734 hydroxycinnamoyltransferase activity(GO:0050734)
0.3 1.1 GO:0004113 cyclic-nucleotide phosphodiesterase activity(GO:0004112) 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity(GO:0004113)
0.2 1.4 GO:0004848 ureidoglycolate hydrolase activity(GO:0004848)
0.2 1.3 GO:0004376 glycolipid mannosyltransferase activity(GO:0004376)
0.2 1.3 GO:0003933 GTP cyclohydrolase activity(GO:0003933)
0.2 0.7 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.2 1.1 GO:0010279 indole-3-acetic acid amido synthetase activity(GO:0010279)
0.2 1.1 GO:0010178 IAA-amino acid conjugate hydrolase activity(GO:0010178)
0.2 0.8 GO:0070139 ubiquitin-like protein-specific endopeptidase activity(GO:0070137) SUMO-specific endopeptidase activity(GO:0070139)
0.2 1.5 GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor(GO:0016639)
0.1 0.9 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.1 2.2 GO:0003978 UDP-glucose 4-epimerase activity(GO:0003978)
0.1 3.6 GO:0005388 calcium-transporting ATPase activity(GO:0005388)
0.1 0.4 GO:0016728 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731)
0.1 0.6 GO:0008490 arsenite secondary active transmembrane transporter activity(GO:0008490) arsenite-transmembrane transporting ATPase activity(GO:0015446) anion transmembrane-transporting ATPase activity(GO:0043225) cadmium ion binding(GO:0046870)
0.1 0.9 GO:0016889 endodeoxyribonuclease activity, producing 3'-phosphomonoesters(GO:0016889)
0.1 0.6 GO:0047780 citrate dehydratase activity(GO:0047780)
0.1 2.1 GO:0015145 monosaccharide transmembrane transporter activity(GO:0015145)
0.1 0.4 GO:0004348 glucosylceramidase activity(GO:0004348)
0.1 0.3 GO:0010331 gibberellin binding(GO:0010331)
0.1 0.5 GO:0005457 GDP-fucose transmembrane transporter activity(GO:0005457)
0.1 1.3 GO:0019798 procollagen-proline 4-dioxygenase activity(GO:0004656) procollagen-proline dioxygenase activity(GO:0019798) peptidyl-proline 4-dioxygenase activity(GO:0031545)
0.1 0.6 GO:0008239 dipeptidyl-peptidase activity(GO:0008239)
0.1 0.8 GO:0017070 U6 snRNA binding(GO:0017070)
0.1 0.7 GO:0004526 ribonuclease P activity(GO:0004526)
0.1 0.3 GO:0042895 tetracycline transporter activity(GO:0008493) toxin transporter activity(GO:0019534) antibiotic transporter activity(GO:0042895)
0.1 0.3 GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity(GO:0046537)
0.1 1.1 GO:0051117 ATPase binding(GO:0051117)
0.1 0.3 GO:0080122 AMP transmembrane transporter activity(GO:0080122)
0.1 0.5 GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity(GO:0000285)
0.1 1.4 GO:0008066 glutamate receptor activity(GO:0008066)
0.1 0.8 GO:0036002 pre-mRNA binding(GO:0036002)
0.1 0.2 GO:0046480 galactolipid galactosyltransferase activity(GO:0046480)
0.1 0.2 GO:0015141 succinate transmembrane transporter activity(GO:0015141)
0.1 0.2 GO:0015928 fucosidase activity(GO:0015928)
0.1 0.9 GO:0017025 TBP-class protein binding(GO:0017025)
0.1 0.7 GO:0004575 sucrose alpha-glucosidase activity(GO:0004575)
0.0 0.3 GO:0017110 nucleoside-diphosphatase activity(GO:0017110)
0.0 5.2 GO:0004722 protein serine/threonine phosphatase activity(GO:0004722)
0.0 0.4 GO:0030291 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.0 2.4 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.6 GO:0008137 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 2.0 GO:0080044 quercetin 7-O-glucosyltransferase activity(GO:0080044)
0.0 1.1 GO:0051787 misfolded protein binding(GO:0051787)
0.0 0.6 GO:0004427 inorganic diphosphatase activity(GO:0004427)
0.0 2.5 GO:0004364 glutathione transferase activity(GO:0004364)
0.0 0.7 GO:0003725 double-stranded RNA binding(GO:0003725)
0.0 0.5 GO:0030674 protein binding, bridging(GO:0030674)
0.0 1.2 GO:0005347 ATP transmembrane transporter activity(GO:0005347)
0.0 1.1 GO:0051087 chaperone binding(GO:0051087)
0.0 0.3 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.0 0.2 GO:0008195 phosphatidate phosphatase activity(GO:0008195)
0.0 0.4 GO:0008327 methyl-CpG binding(GO:0008327)
0.0 0.3 GO:0003730 mRNA 3'-UTR binding(GO:0003730)
0.0 0.2 GO:0035198 miRNA binding(GO:0035198)
0.0 3.5 GO:0061630 ubiquitin protein ligase activity(GO:0061630)
0.0 0.9 GO:0003714 transcription corepressor activity(GO:0003714)
0.0 0.4 GO:0008353 RNA polymerase II carboxy-terminal domain kinase activity(GO:0008353)
0.0 0.4 GO:0042973 glucan endo-1,3-beta-D-glucosidase activity(GO:0042973)
0.0 2.1 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 0.9 GO:0003993 acid phosphatase activity(GO:0003993)
0.0 3.8 GO:0005516 calmodulin binding(GO:0005516)
0.0 0.4 GO:0004805 trehalose-phosphatase activity(GO:0004805)
0.0 1.1 GO:0004712 protein serine/threonine/tyrosine kinase activity(GO:0004712)
0.0 0.9 GO:0061631 ubiquitin conjugating enzyme activity(GO:0061631)
0.0 3.2 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.0 1.8 GO:0019001 GTP binding(GO:0005525) guanyl nucleotide binding(GO:0019001) guanyl ribonucleotide binding(GO:0032561)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.8 NABA ECM GLYCOPROTEINS Genes encoding structural ECM glycoproteins
0.1 0.3 ST PAC1 RECEPTOR PATHWAY PAC1 Receptor Pathway

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 REACTOME MITOCHONDRIAL PROTEIN IMPORT Genes involved in Mitochondrial Protein Import