Project

GSE43616: Time-course of wild-type Arabidopsis leaf

Navigation
Downloads

Results for AT4G18960

Z-value: 0.18

Transcription factors associated with AT4G18960

Gene Symbol Gene ID Gene Info
AT4G18960
AT4G18960 K-box region and MADS-box transcription factor family protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AGarTal_v1_Chr4_+_10382856_103828560.009.9e-01Click!

Activity profile of AT4G18960 motif

Sorted Z-values of AT4G18960 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr5_-_20001572 0.23 AT5G49330.1
MYB111
myb domain protein 111
Chr1_+_27759941 0.22 AT1G73830.1
AT1G73830.2
BEE3
BR enhanced expression 3
Chr5_+_16370368 0.20 AT5G40860.2
AT5G40860.1
AT5G40860
transmembrane protein
Chr5_+_13596824 0.17 AT5G35390.1
PRK1
Leucine-rich repeat protein kinase family protein
Chr3_+_8242256 0.15 AT3G23130.1
SUP
C2H2 and C2HC zinc fingers superfamily protein
Chr3_-_20121314 0.15 AT3G54340.1
AP3
K-box region and MADS-box transcription factor family protein
Chr5_-_3876990 0.15 AT5G12000.2
AT5G12000.1
AT5G12000
kinase with adenine nucleotide alpha hydrolases-like domain-containing protein
Chr2_+_13396042 0.15 AT2G31430.1
PMEI5
Plant invertase/pectin methylesterase inhibitor superfamily protein
Chr4_-_17316374 0.14 AT4G36740.2
AT4G36740.1
HB40
homeobox protein 40
Chr4_+_10382856 0.14 AT4G18960.2
AT4G18960.4
AT4G18960.1
AT4G18960.3
AG
K-box region and MADS-box transcription factor family protein
Chr1_+_415074 0.13 AT1G02190.1
AT1G02190.2
AT1G02190
Fatty acid hydroxylase superfamily
Chr2_+_11773187 0.13 AT2G27550.1
ATC
centroradiali
Chr4_+_959964 0.13 AT4G02180.1
AT4G02180
DC1 domain-containing protein
Chr2_-_7810811 0.12 AT2G17950.1
WUS
Homeodomain-like superfamily protein
Chr2_+_17820114 0.11 AT2G42830.1
AT2G42830.2
SHP2
K-box region and MADS-box transcription factor family protein
Chr4_+_11480321 0.10 AT4G21590.1
AT4G21590.2
ENDO3
endonuclease 3
Chr1_+_17504714 0.10 AT1G47610.1
AT1G47610
Transducin/WD40 repeat-like superfamily protein
Chr1_+_4597567 0.09 AT1G13400.1
NUB
C2H2 and C2HC zinc fingers superfamily protein
Chr2_+_6801803 0.09 AT2G15590.2
AT2G15590.1
AT2G15590
spire, putative (DUF1685)
Chr5_-_15834420 0.07 AT5G39540.1
AT5G39540
F-box associated ubiquitination effector family protein
Chr4_-_17837584 0.07 AT4G37940.2
AGL21
AGAMOUS-like 21
Chr3_+_5800272 0.07 AT3G17010.1
REM22
AP2/B3-like transcriptional factor family protein
Chr3_+_22720921 0.07 AT3G61410.2
AT3G61410.1
AT3G61410.3
AT3G61410
U-box kinase family protein
Chr4_-_17838621 0.07 AT4G37940.4
AGL21
AGAMOUS-like 21
Chr4_-_17838969 0.07 AT4G37940.1
AT4G37940.3
AGL21
AGAMOUS-like 21
Chr3_+_3447568 0.06 AT3G11000.1
AT3G11000.2
AT3G11000
DCD (Development and Cell Death) domain protein
Chr3_-_11009413 0.05 AT3G29020.1
AT3G29020.2
MYB110
myb domain protein 110
Chr4_-_12027421 0.05 AT4G22950.3
AGL19
AGAMOUS-like 19
Chr1_-_8596098 0.04 AT1G24260.2
AT1G24260.3
AT1G24260.1
SEP3
K-box region and MADS-box transcription factor family protein
Chr2_+_14856664 0.04 AT2G35270.1
GIK
Putative AT-hook DNA-binding family protein
Chr4_-_12028004 0.03 AT4G22950.1
AT4G22950.2
AGL19
AGAMOUS-like 19
Chr4_-_15918044 0.03 AT4G32980.2
AT4G32980.1
ATH1
homeobox protein ATH1
Chr4_+_7439115 0.03 AT4G12550.1
AIR1
Auxin-Induced in Root cultures 1
Chr1_-_26009141 0.02 AT1G69180.1
CRC
Plant-specific transcription factor YABBY family protein

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G18960

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.
View svg image
View png image

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.2 GO:1900386 positive regulation of flavonol biosynthetic process(GO:1900386)
0.0 0.3 GO:0010093 specification of floral organ identity(GO:0010093)
0.0 0.1 GO:0090506 axillary shoot meristem initiation(GO:0090506)
0.0 0.1 GO:0048496 maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.0 0.1 GO:0006308 DNA catabolic process(GO:0006308)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0043765 T/G mismatch-specific endonuclease activity(GO:0043765)