ISMARA results: AT4G18960

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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT4G18960

Z-value: 0.18

Transcription factors associated with AT4G18960

Gene Symbol	Gene ID	Gene Info
AT4G18960 TAIR	AT4G18960	K-box region and MADS-box transcription factor family protein

Activity-expression correlation:

Gene	Promoter	Pearson corr. coef.	P-value	Plot
AG	arTal_v1_Chr4_+_10382856_10382856	0.00	9.9e-01	Click!

Activity profile of AT4G18960 motif

Sorted Z-values of AT4G18960 motif

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Promoter	Log-likelihood	Transcript	Gene	Gene Info
arTal_v1_Chr5_-_20001572_20001572 Show fit	0.23	AT5G49330.1	MYB111 TAIR Show fit	myb domain protein 111
arTal_v1_Chr1_+_27759941_27759973 Show fit	0.22	AT1G73830.1 AT1G73830.2	BEE3 TAIR Show fit	BR enhanced expression 3
arTal_v1_Chr5_+_16370368_16370368 Show fit	0.20	AT5G40860.2 AT5G40860.1	AT5G40860 TAIR Show fit	transmembrane protein
arTal_v1_Chr5_+_13596824_13596824 Show fit	0.17	AT5G35390.1	PRK1 TAIR Show fit	Leucine-rich repeat protein kinase family protein
arTal_v1_Chr3_+_8242256_8242256 Show fit	0.15	AT3G23130.1	SUP TAIR Show fit	C2H2 and C2HC zinc fingers superfamily protein
arTal_v1_Chr3_-_20121314_20121314 Show fit	0.15	AT3G54340.1	AP3 TAIR Show fit	K-box region and MADS-box transcription factor family protein
arTal_v1_Chr5_-_3876990_3877004 Show fit	0.15	AT5G12000.2 AT5G12000.1	AT5G12000 TAIR Show fit	kinase with adenine nucleotide alpha hydrolases-like domain-containing protein
arTal_v1_Chr2_+_13396042_13396042 Show fit	0.15	AT2G31430.1	PMEI5 TAIR Show fit	Plant invertase/pectin methylesterase inhibitor superfamily protein
arTal_v1_Chr4_-_17316374_17316441 Show fit	0.14	AT4G36740.2 AT4G36740.1	HB40 TAIR Show fit	homeobox protein 40
arTal_v1_Chr4_+_10382856_10382856 Show fit	0.14	AT4G18960.2 AT4G18960.4 AT4G18960.1 AT4G18960.3	AG TAIR Show fit	K-box region and MADS-box transcription factor family protein

Showing 1 to 10 of 34 entries

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G18960

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.3	GO:0010093	specification of floral organ identity(GO:0010093)
0.1	0.2	GO:1900386	positive regulation of flavonol biosynthetic process(GO:1900386)
0.0	0.1	GO:0090506	axillary shoot meristem initiation(GO:0090506)
0.0	0.1	GO:0048496	maintenance of organ identity(GO:0048496) maintenance of floral organ identity(GO:0048497)
0.0	0.1	GO:0006308	DNA catabolic process(GO:0006308)

Showing 1 to 5 of 5 entries

Gene overrepresentation in molecular function category:

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Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0043765	T/G mismatch-specific endonuclease activity(GO:0043765)

Showing 1 to 1 of 1 entries