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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT4G18450

Z-value: 0.53

Transcription factors associated with AT4G18450

Gene Symbol Gene ID Gene Info
AT4G18450 Integrase-type DNA-binding superfamily protein

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
AT4G18450arTal_v1_Chr4_-_10191252_101912520.403.4e-02Click!

Activity profile of AT4G18450 motif

Sorted Z-values of AT4G18450 motif

Promoter Log-likelihood Transcript Gene Gene Info
Chr1_+_28177670 2.12 AT1G75040.1
pathogenesis-related protein 5
Chr1_-_5645443 1.98 AT1G16510.1
SAUR-like auxin-responsive protein family
Chr4_+_17440177 1.83 AT4G36990.1
heat shock factor 4
Chr1_-_5338326 1.79 AT1G15520.1
AT1G15520.2
pleiotropic drug resistance 12
Chr3_-_1776840 1.78 AT3G05937.1
hypothetical protein
Chr1_+_20876440 1.74 AT1G55850.1
cellulose synthase like E1
Chr4_+_7239200 1.52 AT4G12080.1
AT-hook motif nuclear-localized protein 1
Chr4_-_12890261 1.51 AT4G25110.2
AT4G25110.1
metacaspase 2
Chr1_-_19690589 1.47 AT1G52880.1
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
Chr5_-_25764420 1.39 AT5G64430.1
Octicosapeptide/Phox/Bem1p family protein
Chr3_+_4049309 1.36 AT3G12740.1
ALA-interacting subunit 1
Chr1_+_5090809 1.33 AT1G14780.1
MAC/Perforin domain-containing protein
Chr3_+_16383595 1.28 AT3G44880.1
Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein
Chr3_-_20361560 1.26 AT3G54950.1
patatin-like protein 6
Chr5_+_25692425 1.24 AT5G64230.1
1,8-cineole synthase
Chr3_+_19431095 1.23 AT3G52430.1
alpha/beta-Hydrolases superfamily protein
Chr1_-_25445357 1.23 AT1G67860.1
transmembrane protein
Chr1_-_25446952 1.21 AT1G67865.1
hypothetical protein
Chr1_-_25447622 1.21 AT1G67865.2
hypothetical protein
Chr3_-_1791887 1.16 AT3G05970.1
long-chain acyl-CoA synthetase 6
Chr1_+_8549191 1.15 AT1G24150.2
AT1G24150.1
formin homologue 4
Chr1_-_30142697 1.15 AT1G80130.1
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_6536534 1.13 AT3G18950.1
Transducin/WD40 repeat-like superfamily protein
Chr3_+_590425 1.11 AT3G02740.1
AT3G02740.2
Eukaryotic aspartyl protease family protein
Chr5_-_23725585 1.11 AT5G58730.1
pfkB-like carbohydrate kinase family protein
Chr4_+_13847549 1.05 AT4G27780.2
AT4G27780.1
acyl-CoA binding protein 2
Chr2_-_16115204 1.05 AT2G38490.1
CBL-interacting Serine/Threonine-kinase
Chr4_-_15507176 1.04 AT4G32070.2
AT4G32070.1
Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein
Chr2_-_11685342 1.04 AT2G27310.1
F-box family protein
Chr1_-_18477643 1.01 AT1G49900.1
C2H2 type zinc finger transcription factor family
Chr1_+_11181504 1.01 AT1G31280.1
Argonaute family protein
Chr4_-_9453300 1.00 AT4G16790.1
hydroxyproline-rich glycoprotein family protein
Chr2_+_15192480 0.97 AT2G36220.1
hypothetical protein
Chr4_+_17307709 0.94 AT4G36720.1
HVA22-like protein K
Chr3_-_2695400 0.92 AT3G08850.1
Regulatory-associated protein of TOR 1
Chr4_+_7731189 0.90 AT4G13270.1
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr1_+_12004854 0.90 AT1G33110.1
AT1G33110.2
MATE efflux family protein
Chr2_-_9706217 0.90 AT2G22800.1
Homeobox-leucine zipper protein family
Chr5_-_7636576 0.89 AT5G22850.1
Eukaryotic aspartyl protease family protein
Chr1_+_28070295 0.88 AT1G74710.1
AT1G74710.2
ADC synthase superfamily protein
Chr1_+_22409298 0.88 AT1G60870.1
maternal effect embryo arrest 9
Chr5_+_866339 0.86 AT5G03470.1
Protein phosphatase 2A regulatory B subunit family protein
Chr5_+_16281394 0.86 AT5G40650.1
AT5G40650.2
succinate dehydrogenase 2-2
Chr3_+_21384146 0.85 AT3G57690.1
arabinogalactan protein 23
Chr1_-_7388512 0.85 AT1G21100.1
O-methyltransferase family protein
Chr2_+_7564240 0.84 AT2G17420.1
AT2G17420.2
NADPH-dependent thioredoxin reductase A
Chr1_+_25788305 0.82 AT1G68690.2
AT1G68690.1
AT1G68690.3
Protein kinase superfamily protein
Chr3_+_2143488 0.82 AT3G06780.1
glycine-rich protein
Chr1_+_26830603 0.82 AT1G71170.1
6-phosphogluconate dehydrogenase family protein
Chr3_+_10782095 0.81 AT3G28720.2
AT3G28720.1
transmembrane protein
Chr2_-_9527845 0.79 AT2G22430.1
homeobox protein 6
Chr5_+_4756057 0.79 AT5G14730.1
hypothetical protein
Chr3_+_6820926 0.79 AT3G19640.1
magnesium transporter 4
Chr4_+_16413974 0.78 AT4G34310.3
AT4G34310.1
AT4G34310.2
AT4G34310.5
AT4G34310.9
AT4G34310.8
AT4G34310.4
AT4G34310.7
AT4G34310.6
AT4G34310.10
alpha/beta-Hydrolases superfamily protein
Chr4_+_16997091 0.77 AT4G35890.2
AT4G35890.1
winged-helix DNA-binding transcription factor family protein
Chr4_+_1042235 0.76 AT4G02370.1
pectinesterase (Protein of unknown function, DUF538)
Chr2_+_11669629 0.76 AT2G27260.1
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr4_+_12909463 0.76 AT4G25170.1
AT4G25170.2
Uncharacterized conserved protein (UCP012943)
Chr2_-_17065813 0.74 AT2G40900.1
nodulin MtN21 /EamA-like transporter family protein
Chr1_+_28163344 0.74 AT1G75000.1
GNS1/SUR4 membrane protein family
Chr4_+_10061214 0.73 AT4G18170.1
WRKY DNA-binding protein 28
Chr2_+_114926 0.73 AT2G01190.1
Octicosapeptide/Phox/Bem1p family protein
Chr1_-_12516521 0.73 AT1G34315.1
transmembrane protein
Chr4_-_9421857 0.73 AT4G16750.1
Integrase-type DNA-binding superfamily protein
Chr4_-_8369312 0.73 AT4G14580.1
CBL-interacting protein kinase 4
Chr1_-_344400 0.72 AT1G01990.1
hypothetical protein
Chr1_-_27276317 0.72 AT1G72450.2
jasmonate-zim-domain protein 6
Chr1_-_27276562 0.71 AT1G72450.1
jasmonate-zim-domain protein 6
Chr4_+_9028262 0.70 AT4G15910.1
drought-induced 21
Chr3_-_20552215 0.70 AT3G55430.1
O-Glycosyl hydrolases family 17 protein
Chr2_-_10988924 0.67 AT2G25760.2
Protein kinase family protein
Chr1_+_23527570 0.67 AT1G63440.1
heavy metal atpase 5
Chr1_-_2467058 0.66 AT1G07950.1
AT1G07950.2
Surfeit locus protein 5 subunit 22 of Mediator complex
Chr1_+_27784928 0.66 AT1G73880.1
UDP-glucosyl transferase 89B1
Chr2_-_10989117 0.66 AT2G25760.1
Protein kinase family protein
Chr5_-_9055255 0.66 AT5G25940.1
early nodulin-like protein
Chr1_+_17432433 0.66 AT1G47500.1
AT1G47500.2
RNA-binding protein 47C'
Chr4_+_9891051 0.66 AT4G17790.1
SNARE associated Golgi protein family
Chr3_+_2819040 0.65 AT3G09180.2
AT3G09180.1
AT3G09180.3
mediator of RNA polymerase II transcription subunit
Chr5_+_6369004 0.65 AT5G19050.1
alpha/beta-Hydrolases superfamily protein
Chr3_-_7445303 0.64 AT3G21215.2
AT3G21215.3
AT3G21215.4
AT3G21215.1
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr4_+_14409772 0.64 AT4G29230.1
AT4G29230.2
AT4G29230.3
NAC domain containing protein 75
Chr3_-_1617339 0.64 AT3G05570.1
dipeptide transport ATP-binding protein
Chr1_-_29879204 0.63 AT1G79430.1
AT1G79430.2
Homeodomain-like superfamily protein
Chr2_+_6797111 0.63 AT2G15580.3
AT2G15580.1
RING/U-box superfamily protein
Chr3_-_4671796 0.62 AT3G14090.1
exocyst subunit exo70 family protein D3
Chr1_+_10214681 0.61 AT1G29230.1
CBL-interacting protein kinase 18
Chr2_+_19079305 0.61 AT2G46490.1
hypothetical protein
Chr2_-_16042383 0.61 AT2G38290.2
AT2G38290.1
ammonium transporter 2
Chr2_+_6797335 0.61 AT2G15580.2
RING/U-box superfamily protein
Chr4_-_14859503 0.61 AT4G30370.1
RING/U-box superfamily protein
Chr1_-_30004083 0.61 AT1G79730.1
hydroxyproline-rich glycoprotein family protein
Chr1_+_2238017 0.61 AT1G07280.1
AT1G07280.2
AT1G07280.4
AT1G07280.3
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_8163941 0.60 AT3G22990.1
ARM repeat superfamily protein
Chr4_-_18062347 0.59 AT4G38640.1
Plasma-membrane choline transporter family protein
Chr5_-_20506354 0.58 AT5G50360.1
von willebrand factor A domain protein
Chr5_-_8343284 0.58 AT5G24430.1
Calcium-dependent protein kinase (CDPK) family protein
Chr1_-_16137463 0.58 AT1G42990.1
basic region/leucine zipper motif 60
Chr3_-_5892216 0.57 AT3G17240.2
AT3G17240.3
AT3G17240.1
lipoamide dehydrogenase 2
Chr2_-_11777529 0.57 AT2G27580.2
AT2G27580.1
A20/AN1-like zinc finger family protein
Chr4_+_2471866 0.56 AT4G04885.1
PCF11P-similar protein 4
Chr2_-_13835758 0.55 AT2G32600.1
hydroxyproline-rich glycoprotein family protein
Chr1_+_27026677 0.55 AT1G71860.1
AT1G71860.3
AT1G71860.2
protein tyrosine phosphatase 1
Chr1_+_12455653 0.55 AT1G34200.1
Glyceraldehyde-3-phosphate dehydrogenase-like family protein
Chr2_-_9266393 0.55 AT2G21660.2
cold, circadian rhythm, and rna binding 2
Chr4_-_7386931 0.54 AT4G12450.1
zinc finger (C2H2 type) family protein
Chr2_-_9266557 0.54 AT2G21660.1
cold, circadian rhythm, and rna binding 2
Chr2_-_17613591 0.51 AT2G42280.2
AT2G42280.3
AT2G42280.1
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr2_+_216605 0.50 AT2G01480.1
AT2G01480.2
O-fucosyltransferase family protein
Chr2_+_3618058 0.50 AT2G08986.1
hypothetical protein
Chr4_-_13016235 0.48 AT4G25470.1
C-repeat/DRE binding factor 2
Chr3_-_23200723 0.48 AT3G62710.1
Glycosyl hydrolase family protein
Chr5_+_8447954 0.47 AT5G24670.5
AT5G24670.4
AT5G24670.2
Cytidine/deoxycytidylate deaminase family protein
Chr1_+_7404328 0.47 AT1G21140.1
Vacuolar iron transporter (VIT) family protein
Chr5_-_37999 0.47 AT5G01100.1
O-fucosyltransferase family protein
Chr3_+_17937047 0.47 AT3G48430.2
relative of early flowering 6
Chr5_+_21514896 0.47 AT5G53060.1
AT5G53060.3
AT5G53060.2
RNA-binding KH domain-containing protein
Chr5_-_6730395 0.46 AT5G19900.1
AT5G19900.2
AT5G19900.5
AT5G19900.4
AT5G19900.3
PRLI-interacting factor
Chr3_+_15405984 0.46 AT3G43520.1
Transmembrane proteins 14C
Chr1_+_25788600 0.46 AT1G68690.4
Protein kinase superfamily protein
Chr3_+_2940305 0.46 AT3G09570.1
Lung seven transmembrane receptor family protein
Chr1_+_5578265 0.45 AT1G16310.1
Cation efflux family protein
Chr1_+_23740493 0.45 AT1G63980.1
AT1G63980.2
D111/G-patch domain-containing protein
Chr1_-_30352208 0.44 AT1G80760.1
NOD26-like intrinsic protein 6;1
Chr4_+_9759203 0.44 AT4G17500.1
ethylene responsive element binding factor 1
Chr2_+_3614986 0.43 AT2G07981.1
hypothetical protein
Chr5_+_9803647 0.43 AT5G27690.1
Heavy metal transport/detoxification superfamily protein
Chr1_+_3914774 0.43 AT1G11650.1
AT1G11650.2
RNA-binding (RRM/RBD/RNP motifs) family protein
Chr5_+_26672873 0.42 AT5G66810.2
AT5G66810.1
AT5G66810.3
Ran-binding protein in the microtubule-organising centre protein
Chr3_+_17935256 0.42 AT3G48430.1
relative of early flowering 6
Chr3_+_677240 0.41 AT3G03000.1
EF hand calcium-binding protein family
Chr1_+_5578791 0.41 AT1G16310.2
Cation efflux family protein
Chr1_+_25325138 0.41 AT1G67570.1
AT1G67570.2
zinc finger CONSTANS-like protein (DUF3537)
Chr2_+_17012176 0.40 AT2G40765.1
transmembrane protein
Chr1_+_29665166 0.40 AT1G78910.2
AT1G78910.1
Pseudouridine synthase family protein
Chr5_+_3931349 0.40 AT5G12170.2
AT5G12170.3
CRT (chloroquine-resistance transporter)-like transporter 3
Chr3_-_4660945 0.39 AT3G14067.1
Subtilase family protein
Chr3_+_16871578 0.39 AT3G45890.1
root UVB sensitive-like protein (Protein of unknown function, DUF647)
Chr5_+_7524086 0.39 AT5G22630.1
arogenate dehydratase 5
Chr4_-_8305857 0.39 AT4G14430.1
indole-3-butyric acid response 10
Chr3_+_17558793 0.39 AT3G47620.1
TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14
Chr1_-_9733000 0.39 AT1G27930.1
glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
Chr3_+_4525033 0.39 AT3G13780.1
SMAD/FHA domain-containing protein
Chr1_-_1399053 0.39 AT1G04930.3
AT1G04930.2
AT1G04930.1
hydroxyproline-rich glycoprotein family protein
Chr3_+_270221 0.39 AT3G01750.1
AT3G01750.2
Ankyrin repeat family protein
Chr5_+_8447378 0.38 AT5G24670.1
AT5G24670.3
Cytidine/deoxycytidylate deaminase family protein
Chr1_-_23855658 0.38 AT1G64280.1
regulatory protein (NPR1)
Chr5_+_22261134 0.38 AT5G54800.1
glucose 6-phosphate/phosphate translocator 1
Chr4_-_4074735 0.38 AT4G06746.1
related to AP2 9
Chr2_+_12363426 0.37 AT2G28810.2
AT2G28810.1
Dof-type zinc finger DNA-binding family protein
Chr2_+_19625459 0.37 AT2G47960.1
trafficking protein particle complex subunit-like protein
Chr4_-_16853035 0.36 AT4G35480.1
RING-H2 finger A3B
Chr3_+_6146015 0.36 AT3G17950.3
AT3G17950.1
AT3G17950.2
transmembrane protein
Chr3_+_9060836 0.35 AT3G24810.1
Cyclin-dependent kinase inhibitor family protein
Chr5_+_26673991 0.34 AT5G66810.4
Ran-binding protein in the microtubule-organising centre protein
Chr2_-_18556669 0.34 AT2G44980.2
AT2G44980.1
AT2G44980.3
SNF2 domain-containing protein / helicase domain-containing protein
Chr3_-_23301865 0.34 AT3G63060.1
EID1-like 3
Chr3_+_6273966 0.33 AT3G18290.1
zinc finger protein-like protein
Chr5_-_1374787 0.33 AT5G04760.1
Duplicated homeodomain-like superfamily protein
Chr3_-_851741 0.33 AT3G03550.1
RING/U-box superfamily protein
Chr2_+_9126263 0.33 AT2G21320.1
B-box zinc finger family protein
Chr5_-_25155983 0.32 AT5G62650.1
Tic22-like family protein
Chr3_-_10132759 0.32 AT3G27380.2
AT3G27380.1
succinate dehydrogenase 2-1
Chr3_+_2413623 0.32 AT3G07565.1
AT3G07565.3
AT3G07565.4
AT3G07565.2
histone H2A deubiquitinase (DUF3755)
Chr5_+_7207166 0.32 AT5G21170.3
5'-AMP-activated protein kinase beta-2 subunit protein
Chr1_-_23101335 0.32 AT1G62422.1
hypothetical protein
Chr5_+_26799738 0.31 AT5G67170.3
AT5G67170.2
AT5G67170.1
SEC-C motif-containing protein / OTU-like cysteine protease family protein
Chr3_-_15885380 0.31 AT3G44140.1
transmembrane protein
Chr5_+_22341750 0.31 AT5G55060.2
AT5G55060.1
Rab3 GTPase-activating protein catalytic subunit
Chr1_+_1207344 0.31 AT1G04445.1
C2H2-like zinc finger protein
Chr2_-_18907973 0.31 AT2G45950.2
AT2G45950.1
AT2G45950.3
SKP1-like 20
Chr5_+_20255173 0.30 AT5G49840.3
AT5G49840.2
AT5G49840.4
AT5G49840.1
ATP-dependent Clp protease
Chr4_+_578028 0.30 AT4G01410.1
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr5_+_21958059 0.30 AT5G54110.1
AT5G54110.2
membrane-associated mannitol-induced
Chr5_-_8982873 0.30 AT5G25800.2
AT5G25800.1
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr5_+_4441858 0.30 AT5G13760.1
Plasma-membrane choline transporter family protein
Chr2_+_2055519 0.30 AT2G05580.1
Glycine-rich protein family
Chr3_-_16002163 0.30 AT3G44326.1
F-box family protein
Chr5_+_7205477 0.29 AT5G21170.1
5'-AMP-activated protein kinase beta-2 subunit protein
Chr4_+_18315545 0.29 AT4G39390.2
AT4G39390.1
AT4G39390.3
nucleotide sugar transporter-KT 1
Chr5_+_7205667 0.29 AT5G21170.2
5'-AMP-activated protein kinase beta-2 subunit protein
Chr5_+_8735944 0.29 AT5G25220.1
AT5G25220.2
homeobox protein knotted-1-like 3
Chr2_-_16740486 0.28 AT2G40090.1
ABC2 homolog 9
Chr4_+_13611796 0.28 AT4G27160.1
seed storage albumin 3
Chr1_-_28616785 0.28 AT1G76270.1
O-fucosyltransferase family protein
Chr2_-_16038972 0.26 AT2G38280.2
AT2G38280.1
AMP deaminase, putative / myoadenylate deaminase
Chr2_+_14746236 0.26 AT2G34970.1
Trimeric LpxA-like enzyme
Chr1_-_342040 0.26 AT1G01980.1
FAD-binding Berberine family protein
Chr3_+_3232608 0.25 AT3G10400.1
RNA recognition motif and CCHC-type zinc finger domains containing protein
Chr1_+_26814260 0.25 AT1G71100.1
Ribose 5-phosphate isomerase, type A protein
Chr3_+_5121303 0.25 AT3G15210.1
ethylene responsive element binding factor 4
Chr1_-_22595338 0.25 AT1G61260.1
cotton fiber (DUF761)
Chr4_-_16282048 0.25 AT4G33970.1
Leucine-rich repeat (LRR) family protein
Chr1_+_26626528 0.24 AT1G70620.5
AT1G70620.6
AT1G70620.4
AT1G70620.3
AT1G70620.8
AT1G70620.7
AT1G70620.1
AT1G70620.2
AT1G70620.9
cyclin-like protein
Chr4_+_16402129 0.24 AT4G34265.1
AT4G34265.4
AT4G34265.3
AT4G34265.2
AT4G34265.5
AT4G34265.6
hypothetical protein
Chr1_-_17976663 0.24 AT1G48620.1
high mobility group A5
Chr3_+_2622849 0.24 AT3G08640.1
alphavirus core family protein (DUF3411)
Chr1_+_17424473 0.24 AT1G47490.2
AT1G47490.1
RNA-binding protein 47C
Chr4_-_16758358 0.24 AT4G35230.1
BR-signaling kinase 1
Chr2_-_18907477 0.23 AT2G45950.4
AT2G45950.5
SKP1-like 20

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G18450

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.8 GO:0015692 lead ion transport(GO:0015692) abscisic acid transport(GO:0080168)
0.4 1.1 GO:0010288 response to lead ion(GO:0010288)
0.3 1.2 GO:0010618 response to trehalose(GO:0010353) aerenchyma formation(GO:0010618) positive regulation of secondary metabolite biosynthetic process(GO:1900378)
0.2 0.9 GO:0010507 negative regulation of autophagy(GO:0010507)
0.2 0.6 GO:0015696 ammonium transport(GO:0015696)
0.2 1.0 GO:0019048 modulation by virus of host morphology or physiology(GO:0019048)
0.2 0.6 GO:0006369 termination of RNA polymerase II transcription(GO:0006369)
0.2 0.5 GO:0090069 regulation of ribosome biogenesis(GO:0090069)
0.1 0.9 GO:0060866 leaf abscission(GO:0060866)
0.1 1.2 GO:0006121 mitochondrial electron transport, succinate to ubiquinone(GO:0006121)
0.1 0.4 GO:0015717 triose phosphate transport(GO:0015717) triose phosphate transmembrane transport(GO:0035436)
0.1 1.0 GO:0009061 anaerobic respiration(GO:0009061)
0.1 0.3 GO:0071763 nuclear membrane organization(GO:0071763)
0.1 1.4 GO:0015914 phospholipid transport(GO:0015914)
0.1 1.5 GO:0048317 seed morphogenesis(GO:0048317)
0.1 0.3 GO:0010481 epidermal cell division(GO:0010481) regulation of epidermal cell division(GO:0010482)
0.1 0.7 GO:1990169 detoxification of copper ion(GO:0010273) stress response to copper ion(GO:1990169)
0.1 0.9 GO:2000757 histone H3-K9 demethylation(GO:0033169) negative regulation of histone acetylation(GO:0035067) negative regulation of protein acetylation(GO:1901984) negative regulation of peptidyl-lysine acetylation(GO:2000757)
0.1 1.1 GO:0010264 myo-inositol hexakisphosphate biosynthetic process(GO:0010264) myo-inositol hexakisphosphate metabolic process(GO:0033517)
0.1 2.3 GO:0031540 regulation of anthocyanin biosynthetic process(GO:0031540)
0.1 0.4 GO:0000455 enzyme-directed rRNA pseudouridine synthesis(GO:0000455)
0.1 0.4 GO:0042939 glutathione transport(GO:0034635) tripeptide transport(GO:0042939)
0.1 0.8 GO:1903830 magnesium ion transmembrane transport(GO:1903830)
0.1 0.9 GO:0042343 indole glucosinolate metabolic process(GO:0042343)
0.1 1.4 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.1 1.2 GO:0001676 long-chain fatty acid metabolic process(GO:0001676)
0.1 0.7 GO:0042659 regulation of cell fate specification(GO:0042659)
0.1 0.4 GO:0080024 indolebutyric acid metabolic process(GO:0080024)
0.1 0.2 GO:0035247 peptidyl-arginine methylation, to asymmetrical-dimethyl arginine(GO:0019919) peptidyl-arginine N-methylation(GO:0035246) peptidyl-arginine omega-N-methylation(GO:0035247)
0.1 0.2 GO:0072337 modified amino acid transport(GO:0072337)
0.1 1.3 GO:0019374 galactolipid metabolic process(GO:0019374)
0.1 2.7 GO:2000022 regulation of jasmonic acid mediated signaling pathway(GO:2000022)
0.1 0.3 GO:0032877 positive regulation of DNA endoreduplication(GO:0032877) positive regulation of DNA-dependent DNA replication(GO:2000105)
0.1 1.5 GO:0043069 negative regulation of programmed cell death(GO:0043069)
0.1 1.7 GO:0009833 plant-type primary cell wall biogenesis(GO:0009833)
0.1 0.8 GO:0006574 valine catabolic process(GO:0006574)
0.0 0.3 GO:0072334 UDP-galactose transport(GO:0015785) UDP-galactose transmembrane transport(GO:0072334)
0.0 1.2 GO:0052482 defense response by cell wall thickening(GO:0052482)
0.0 0.9 GO:0051177 meiotic sister chromatid segregation(GO:0045144) meiotic sister chromatid cohesion(GO:0051177)
0.0 0.3 GO:0009720 detection of hormone stimulus(GO:0009720) detection of endogenous stimulus(GO:0009726)
0.0 0.7 GO:0010244 response to low fluence blue light stimulus by blue low-fluence system(GO:0010244)
0.0 0.5 GO:0007155 cell adhesion(GO:0007155) biological adhesion(GO:0022610)
0.0 0.1 GO:0010433 nectary development(GO:0010254) bract morphogenesis(GO:0010433) bract formation(GO:0010434)
0.0 0.3 GO:0048871 multicellular organismal homeostasis(GO:0048871)
0.0 0.3 GO:0070370 cellular heat acclimation(GO:0070370)
0.0 0.5 GO:0031053 primary miRNA processing(GO:0031053)
0.0 0.4 GO:0016584 nucleosome positioning(GO:0016584)
0.0 0.2 GO:0009972 cytidine catabolic process(GO:0006216) cytidine deamination(GO:0009972) cytidine metabolic process(GO:0046087)
0.0 0.3 GO:0009052 pentose-phosphate shunt, non-oxidative branch(GO:0009052)
0.0 0.3 GO:0090158 endoplasmic reticulum membrane organization(GO:0090158)
0.0 0.1 GO:0001887 selenium compound metabolic process(GO:0001887)
0.0 0.1 GO:0097054 L-glutamate biosynthetic process(GO:0097054)
0.0 0.6 GO:1905177 tracheary element differentiation(GO:1905177)
0.0 0.8 GO:0051781 positive regulation of cell division(GO:0051781)
0.0 0.6 GO:0030968 endoplasmic reticulum unfolded protein response(GO:0030968)
0.0 0.3 GO:0009864 induced systemic resistance, jasmonic acid mediated signaling pathway(GO:0009864)
0.0 0.2 GO:0045039 protein import into mitochondrial inner membrane(GO:0045039)
0.0 1.3 GO:0009626 plant-type hypersensitive response(GO:0009626)
0.0 0.6 GO:0000245 spliceosomal complex assembly(GO:0000245)
0.0 0.9 GO:0043562 cellular response to nitrogen levels(GO:0043562)
0.0 0.3 GO:0060688 regulation of morphogenesis of a branching structure(GO:0060688) regulation of secondary shoot formation(GO:2000032)
0.0 0.2 GO:0006621 protein retention in ER lumen(GO:0006621)
0.0 0.3 GO:0006188 IMP biosynthetic process(GO:0006188) purine nucleotide salvage(GO:0032261) purine-containing compound salvage(GO:0043101)
0.0 0.4 GO:0010193 response to ozone(GO:0010193)
0.0 0.2 GO:0009870 defense response signaling pathway, resistance gene-dependent(GO:0009870)
0.0 0.6 GO:0006368 transcription elongation from RNA polymerase II promoter(GO:0006368)
0.0 0.5 GO:0043547 positive regulation of GTPase activity(GO:0043547)
0.0 0.9 GO:0034605 cellular response to heat(GO:0034605)
0.0 0.4 GO:0010229 inflorescence development(GO:0010229)
0.0 0.1 GO:0016577 protein demethylation(GO:0006482) protein dealkylation(GO:0008214) histone demethylation(GO:0016577) histone lysine demethylation(GO:0070076)
0.0 0.8 GO:0009788 negative regulation of abscisic acid-activated signaling pathway(GO:0009788)
0.0 0.5 GO:0009251 glucan catabolic process(GO:0009251)
0.0 1.8 GO:0009408 response to heat(GO:0009408)
0.0 0.3 GO:0043044 ATP-dependent chromatin remodeling(GO:0043044)
0.0 0.1 GO:0042732 D-xylose metabolic process(GO:0042732)
0.0 0.4 GO:0043269 regulation of ion transport(GO:0043269)
0.0 2.2 GO:0050832 defense response to fungus(GO:0050832)
0.0 0.3 GO:0031348 negative regulation of defense response(GO:0031348)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.4 1.1 GO:0009514 glyoxysome(GO:0009514)
0.2 0.9 GO:0038201 TORC1 complex(GO:0031931) TOR complex(GO:0038201)
0.1 0.9 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.1 1.2 GO:0045281 respiratory chain complex II(GO:0045273) succinate dehydrogenase complex(GO:0045281)
0.1 0.6 GO:0016593 Cdc73/Paf1 complex(GO:0016593)
0.1 0.8 GO:0005844 polysome(GO:0005844)
0.1 0.4 GO:0017053 transcriptional repressor complex(GO:0017053)
0.1 0.6 GO:0045252 oxoglutarate dehydrogenase complex(GO:0045252)
0.1 0.6 GO:0016514 SWI/SNF complex(GO:0016514) BAF-type complex(GO:0090544)
0.1 0.5 GO:0010445 nuclear dicing body(GO:0010445)
0.0 0.6 GO:0005849 mRNA cleavage factor complex(GO:0005849)
0.0 0.9 GO:0010494 cytoplasmic stress granule(GO:0010494)
0.0 0.9 GO:0035097 histone methyltransferase complex(GO:0035097)
0.0 0.9 GO:0000159 protein phosphatase type 2A complex(GO:0000159)
0.0 0.3 GO:0005851 eukaryotic translation initiation factor 2B complex(GO:0005851)
0.0 0.2 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.0 0.4 GO:0005750 mitochondrial respiratory chain complex III(GO:0005750) respiratory chain complex III(GO:0045275)
0.0 1.3 GO:0009706 chloroplast inner membrane(GO:0009706)
0.0 1.5 GO:0098687 chromosomal region(GO:0098687)
0.0 0.4 GO:0072686 mitotic spindle(GO:0072686)
0.0 0.6 GO:0005686 U2 snRNP(GO:0005686)
0.0 0.1 GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m(GO:0071541)
0.0 0.3 GO:0034399 nuclear periphery(GO:0034399)
0.0 0.6 GO:0000145 exocyst(GO:0000145)
0.0 0.3 GO:0005689 U12-type spliceosomal complex(GO:0005689)
0.0 0.4 GO:0031306 intrinsic component of mitochondrial outer membrane(GO:0031306) integral component of mitochondrial outer membrane(GO:0031307)
0.0 0.2 GO:0000786 nucleosome(GO:0000786)
0.0 0.2 GO:0005744 mitochondrial inner membrane presequence translocase complex(GO:0005744)
0.0 0.7 GO:0016592 mediator complex(GO:0016592)
0.0 0.3 GO:0032592 integral component of mitochondrial membrane(GO:0032592)
0.0 1.4 GO:0042025 host(GO:0018995) host cell part(GO:0033643) host intracellular part(GO:0033646) host intracellular organelle(GO:0033647) host intracellular membrane-bounded organelle(GO:0033648) host cell nucleus(GO:0042025) intracellular region of host(GO:0043656) host cell(GO:0043657) other organism(GO:0044215) other organism cell(GO:0044216) other organism part(GO:0044217)
0.0 2.1 GO:0099503 secretory vesicle(GO:0099503)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.5 GO:0003680 AT DNA binding(GO:0003680)
0.3 0.9 GO:0008909 isochorismate synthase activity(GO:0008909)
0.3 0.8 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.3 1.1 GO:0032791 lead ion binding(GO:0032791)
0.3 1.3 GO:0010277 chlorophyllide a oxygenase [overall] activity(GO:0010277)
0.2 0.9 GO:1901982 disaccharide binding(GO:0048030) maltose binding(GO:1901982)
0.2 0.9 GO:0004000 adenosine deaminase activity(GO:0004000) tRNA-specific adenosine deaminase activity(GO:0008251)
0.2 0.6 GO:0008519 ammonium transmembrane transporter activity(GO:0008519)
0.2 1.0 GO:0035197 siRNA binding(GO:0035197)
0.2 1.2 GO:0008177 succinate dehydrogenase (ubiquinone) activity(GO:0008177)
0.1 0.7 GO:0015186 L-glutamine transmembrane transporter activity(GO:0015186)
0.1 0.4 GO:0015152 hexose phosphate transmembrane transporter activity(GO:0015119) glucose-6-phosphate transmembrane transporter activity(GO:0015152)
0.1 1.3 GO:0047617 acyl-CoA hydrolase activity(GO:0047617)
0.1 0.6 GO:0004148 dihydrolipoyl dehydrogenase activity(GO:0004148)
0.1 0.7 GO:0033836 flavonol 7-O-beta-glucosyltransferase activity(GO:0033836)
0.1 1.2 GO:0102391 decanoate--CoA ligase activity(GO:0102391)
0.1 0.9 GO:0032453 histone demethylase activity (H3-K4 specific)(GO:0032453) histone demethylase activity (H3-trimethyl-K4 specific)(GO:0034647)
0.1 0.6 GO:0033549 MAP kinase phosphatase activity(GO:0033549)
0.1 1.2 GO:0000993 RNA polymerase II core binding(GO:0000993)
0.1 0.4 GO:0004165 dodecenoyl-CoA delta-isomerase activity(GO:0004165)
0.1 0.2 GO:0016277 [myelin basic protein]-arginine N-methyltransferase activity(GO:0016277)
0.1 0.2 GO:0008517 folic acid transporter activity(GO:0008517)
0.1 0.9 GO:0030674 protein binding, bridging(GO:0030674)
0.1 0.4 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.1 0.3 GO:0004751 ribose-5-phosphate isomerase activity(GO:0004751)
0.1 0.8 GO:0015095 magnesium ion transmembrane transporter activity(GO:0015095)
0.1 0.2 GO:0050736 O-malonyltransferase activity(GO:0050736)
0.1 1.7 GO:0016760 cellulose synthase (UDP-forming) activity(GO:0016760)
0.0 0.2 GO:0031683 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.0 0.3 GO:0004791 thioredoxin-disulfide reductase activity(GO:0004791)
0.0 0.3 GO:0005459 UDP-galactose transmembrane transporter activity(GO:0005459)
0.0 0.1 GO:0001056 RNA polymerase I activity(GO:0001054) RNA polymerase III activity(GO:0001056)
0.0 0.1 GO:0003962 cystathionine gamma-synthase activity(GO:0003962)
0.0 0.3 GO:0030291 cyclin-dependent protein serine/threonine kinase inhibitor activity(GO:0004861) protein serine/threonine kinase inhibitor activity(GO:0030291)
0.0 0.5 GO:0009044 xylan 1,4-beta-xylosidase activity(GO:0009044)
0.0 0.5 GO:0019239 deaminase activity(GO:0019239)
0.0 0.2 GO:0031492 nucleosomal DNA binding(GO:0031492)
0.0 0.8 GO:0008143 poly(A) binding(GO:0008143)
0.0 1.0 GO:0015562 efflux transmembrane transporter activity(GO:0015562)
0.0 0.1 GO:0016040 glutamate synthase activity(GO:0015930) glutamate synthase (NADH) activity(GO:0016040) glutamate synthase activity, NAD(P)H as acceptor(GO:0045181)
0.0 0.5 GO:0097602 cullin family protein binding(GO:0097602)
0.0 0.1 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 0.4 GO:0031369 translation initiation factor binding(GO:0031369)
0.0 0.4 GO:0009982 pseudouridine synthase activity(GO:0009982)
0.0 1.5 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 1.6 GO:0019901 protein kinase binding(GO:0019901)
0.0 0.9 GO:0008171 O-methyltransferase activity(GO:0008171)
0.0 0.3 GO:0031491 nucleosome binding(GO:0031491)
0.0 0.9 GO:0019888 protein phosphatase regulator activity(GO:0019888)
0.0 0.9 GO:0042910 xenobiotic transporter activity(GO:0042910)
0.0 1.7 GO:0000978 RNA polymerase II core promoter proximal region sequence-specific DNA binding(GO:0000978)
0.0 0.5 GO:0001228 transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001228)
0.0 0.1 GO:0046975 histone methyltransferase activity (H3-K36 specific)(GO:0046975)
0.0 1.6 GO:0061630 ubiquitin protein ligase activity(GO:0061630)