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GSE43616: Time-course of wild-type Arabidopsis leaf

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Results for AT4G15090

Z-value: 0.76

Transcription factors associated with AT4G15090

Gene Symbol Gene ID Gene Info
AT4G15090
AT4G15090 FRS (FAR1 Related Sequences) transcription factor family

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
FAR1arTal_v1_Chr4_+_8614060_86140670.029.3e-01Click!

Activity profile of AT4G15090 motif

Sorted Z-values of AT4G15090 motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
Chr2_-_6493512 1.45 AT2G15020.1
AT2G15020
hypothetical protein
Chr3_-_1286760 1.35 AT3G04720.1
PR4
pathogenesis-related 4
Chr3_-_826585 1.29 AT3G03470.1
CYP89A9
cytochrome P450, family 87, subfamily A, polypeptide 9
Chr1_-_27171410 1.00 AT1G72200.1
AT1G72200
RING/U-box superfamily protein
Chr4_+_7304323 0.94 AT4G12290.2
AT4G12290
Copper amine oxidase family protein
Chr4_+_7303985 0.93 AT4G12290.1
AT4G12290
Copper amine oxidase family protein
Chr1_+_6450585 0.91 AT1G18710.1
MYB47
myb domain protein 47
Chr2_+_15192480 0.90 AT2G36220.1
AT2G36220
hypothetical protein
Chr1_+_26651840 0.89 AT1G70690.1
HWI1
Receptor-like protein kinase-related family protein
Chr2_+_17165191 0.85 AT2G41180.1
SIB2
VQ motif-containing protein
Chr5_+_15501126 0.83 AT5G38710.1
AT5G38710.2
AT5G38710
Methylenetetrahydrofolate reductase family protein
Chr5_+_17806397 0.79 AT5G44210.1
ERF9
erf domain protein 9
Chr4_-_12890261 0.76 AT4G25110.2
AT4G25110.1
MC2
metacaspase 2
Chr1_+_3945584 0.75 AT1G11700.1
AT1G11700
senescence regulator (Protein of unknown function, DUF584)
Chr5_-_7826611 0.75 AT5G23230.1
NIC2
nicotinamidase 2
Chr4_-_8123835 0.74 AT4G14090.1
AT4G14090
UDP-Glycosyltransferase superfamily protein
Chr1_+_29759030 0.72 AT1G79110.2
AT1G79110.3
AT1G79110.1
BRG2
zinc ion binding protein
Chr5_+_19309227 0.64 AT5G47640.1
NF-YB2
nuclear factor Y, subunit B2
Chr3_+_8488695 0.63 AT3G23630.1
IPT7
isopentenyltransferase 7
Chr1_+_75390 0.63 AT1G01180.1
AT1G01180
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr1_+_24458591 0.63 AT1G65760.1
AT1G65760
ascorbic acid mannose pathway regulator (DUF295)
Chr5_-_7377667 0.61 AT5G22290.2
AT5G22290.1
NAC089
NAC domain containing protein 89
Chr3_-_18373147 0.61 AT3G49570.1
LSU3
response to low sulfur 3
Chr3_-_10941833 0.61 AT3G28920.1
HB34
homeobox protein 34
Chr2_+_16303295 0.60 AT2G39050.1
EULS3
hydroxyproline-rich glycoprotein family protein
Chr5_+_7842607 0.59 AT5G23280.1
AT5G23280
TCP family transcription factor
Chr4_+_18126057 0.58 AT4G38850.1
SAUR15
SAUR-like auxin-responsive protein family
Chr5_-_21651626 0.57 AT5G53370.1
AT5G53370.2
PMEPCRF
pectin methylesterase PCR fragment F
Chr1_+_27092893 0.57 AT1G71970.1
AT1G71970
hypothetical protein
Chr4_+_9449114 0.56 AT4G16780.1
HB-2
homeobox protein 2
Chr4_-_15614544 0.56 AT4G32340.1
AT4G32340
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr5_-_4697078 0.55 AT5G14570.1
NRT2.7
high affinity nitrate transporter 2.7
Chr3_+_15567067 0.54 AT3G43670.1
AT3G43670
Copper amine oxidase family protein
Chr4_-_1604628 0.54 AT4G03600.1
AT4G03600
pyrroline-5-carboxylate reductase
Chr1_+_26832267 0.54 AT1G71180.1
AT1G71180
6-phosphogluconate dehydrogenase family protein
Chr2_-_17098731 0.52 AT2G40970.1
MYBC1
Homeodomain-like superfamily protein
Chr3_+_4642657 0.52 AT3G14020.2
NF-YA6
nuclear factor Y, subunit A6
Chr1_-_4577967 0.52 AT1G13360.2
AT1G13360.3
AT1G13360
hypothetical protein
Chr1_-_4578369 0.51 AT1G13360.1
AT1G13360
hypothetical protein
Chr1_+_8673914 0.50 AT1G24470.1
KCR2
beta-ketoacyl reductase 2
Chr3_-_8405289 0.50 AT3G23440.1
EDA6
embryo sac development arrest 6
Chr1_+_2187776 0.50 AT1G07130.1
STN1
Nucleic acid-binding, OB-fold-like protein
Chr5_+_4427783 0.49 AT5G13720.1
AT5G13720
Uncharacterized protein family (UPF0114)
Chr3_+_5081780 0.48 AT3G15095.2
AT3G15095.1
AT3G15095.3
HCF243
Serine/Threonine-kinase pakA-like protein
Chr3_-_7709933 0.48 AT3G21890.1
BBX31
B-box type zinc finger family protein
Chr2_+_11669629 0.48 AT2G27260.1
AT2G27260
Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
Chr1_-_22096620 0.48 AT1G60010.1
AT1G60010
D-ribose-binding periplasmic protein
Chr2_+_16556801 0.47 AT2G39705.1
RTFL8
ROTUNDIFOLIA like 8
Chr1_+_26822517 0.47 AT1G71130.1
CRF8
Integrase-type DNA-binding superfamily protein
Chr3_-_4660945 0.46 AT3G14067.1
AT3G14067
Subtilase family protein
Chr3_+_4641930 0.46 AT3G14020.1
NF-YA6
nuclear factor Y, subunit A6
Chr3_+_19534585 0.46 AT3G52710.1
AT3G52710
hypothetical protein
Chr3_+_21714911 0.46 AT3G58710.2
AT3G58710.1
WRKY69
WRKY DNA-binding protein 69
Chr4_-_15447042 0.46 AT4G31920.1
RR10
response regulator 10
Chr3_-_729638 0.44 AT3G03150.1
AT3G03150
hypothetical protein
Chr4_+_9928587 0.44 AT4G17870.1
PYR1
Polyketide cyclase/dehydrase and lipid transport superfamily protein
Chr3_+_2288732 0.44 AT3G07195.1
AT3G07195.2
AT3G07195
RPM1-interacting protein 4 (RIN4) family protein
Chr1_+_5168464 0.43 AT1G15000.1
scpl50
serine carboxypeptidase-like 50
Chr1_-_19822399 0.43 AT1G53170.1
ERF8
ethylene response factor 8
Chr4_+_2660156 0.43 AT4G05150.1
AT4G05150
Octicosapeptide/Phox/Bem1p family protein
Chr1_-_8537780 0.42 AT1G24140.1
AT1G24140
Matrixin family protein
Chr1_+_4547388 0.42 AT1G13280.1
AOC4
allene oxide cyclase 4
Chr4_-_15591213 0.41 AT4G32290.1
AT4G32290
Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
Chr3_-_21008064 0.41 AT3G56710.1
AT3G56710.2
SIB1
sigma factor binding protein 1
Chr3_+_17644198 0.40 AT3G47820.1
PUB39
PLANT U-BOX 39
Chr5_-_16974877 0.39 AT5G42440.1
AT5G42440
Protein kinase superfamily protein
Chr3_+_1172687 0.39 AT3G04420.2
AT3G04420.1
NAC048
NAC domain containing protein 48
Chr2_-_15556835 0.38 AT2G37035.1
AT2G37035
transmembrane protein
Chr1_-_5055299 0.38 AT1G14690.2
AT1G14690.1
MAP65-7
microtubule-associated protein 65-7
Chr1_-_7534927 0.38 AT1G21520.1
AT1G21520
hypothetical protein
Chr1_+_813413 0.38 AT1G03310.1
AT1G03310.2
DBE1
debranching enzyme 1
Chr3_-_9710100 0.37 AT3G26500.1
PIRL2
plant intracellular ras group-related LRR 2
Chr1_-_182497 0.37 AT1G01490.4
AT1G01490.3
AT1G01490
Heavy metal transport/detoxification superfamily protein
Chr1_-_182749 0.37 AT1G01490.2
AT1G01490.1
AT1G01490
Heavy metal transport/detoxification superfamily protein
Chr3_-_18161486 0.37 AT3G48990.1
AAE3
AMP-dependent synthetase and ligase family protein
Chr5_-_24185629 0.37 AT5G60050.1
AT5G60050
BTB/POZ domain-containing protein
Chr4_+_17442612 0.37 AT4G37000.1
ACD2
accelerated cell death 2 (ACD2)
Chr4_-_18329699 0.36 AT4G39403.1
PLS
polari
Chr1_+_12455653 0.36 AT1G34200.1
AT1G34200
Glyceraldehyde-3-phosphate dehydrogenase-like family protein
Chr4_-_18217616 0.36 AT4G39090.1
RD19
Papain family cysteine protease
Chr4_+_12086898 0.36 AT4G23060.1
IQD22
IQ-domain 22
Chr1_+_22893101 0.36 AT1G61930.1
AT1G61930
senescence regulator (Protein of unknown function, DUF584)
Chr4_-_543868 0.35 AT4G01290.2
AT4G01290.1
AT4G01290
chorismate synthase
Chr5_-_2508373 0.35 AT5G07840.1
PIA1
Ankyrin repeat family protein
Chr1_+_1018058 0.34 AT1G03970.1
GBF4
G-box binding factor 4
Chr1_+_27029116 0.34 AT1G71865.1
AT1G71865
PyrD
Chr5_+_17676795 0.34 AT5G43930.1
AT5G43930.3
AT5G43930.4
AT5G43930.2
AT5G43930
Transducin family protein / WD-40 repeat family protein
Chr5_-_9486365 0.33 AT5G26960.1
AT5G26960
Galactose oxidase/kelch repeat superfamily protein
Chr1_-_4590501 0.33 AT1G13380.1
AT1G13380
sodium/hydrogen exchanger (DUF1218)
Chr2_+_13014859 0.33 AT2G30550.1
AT2G30550
alpha/beta-Hydrolases superfamily protein
Chr5_-_2950695 0.33 AT5G09470.1
DIC3
dicarboxylate carrier 3
Chr4_-_18077369 0.32 AT4G38700.1
AT4G38700
Disease resistance-responsive (dirigent-like protein) family protein
Chr1_-_12358966 0.32 AT1G34000.1
OHP2
one-helix protein 2
Chr5_+_26261136 0.32 AT5G65683.1
WAVH2
Zinc finger (C3HC4-type RING finger) family protein
Chr3_+_20791173 0.31 AT3G56030.1
AT3G56030
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr3_+_9769634 0.31 AT3G26600.2
AT3G26600.1
ARO4
armadillo repeat only 4
Chr1_+_25765718 0.31 AT1G68620.1
AT1G68620
alpha/beta-Hydrolases superfamily protein
Chr1_+_25319804 0.31 AT1G67560.1
LOX6
PLAT/LH2 domain-containing lipoxygenase family protein
Chr3_+_2958676 0.30 AT3G09650.1
HCF152
Tetratricopeptide repeat (TPR)-like superfamily protein
Chr1_+_28932868 0.30 AT1G76990.3
AT1G76990.2
ACR3
ACT domain repeat 3
Chr1_+_28932119 0.30 AT1G76990.1
AT1G76990.4
ACR3
ACT domain repeat 3
Chr4_+_13511837 0.30 AT4G26890.1
MAPKKK16
mitogen-activated protein kinase kinase kinase 16
Chr1_-_3241863 0.30 AT1G09950.1
RAS1
RESPONSE TO ABA AND SALT 1
Chr3_-_2037791 0.30 AT3G06540.1
REP
Rab escort protein
Chr5_+_16779643 0.30 AT5G41920.1
AT5G41920
GRAS family transcription factor
Chr5_+_24386010 0.29 AT5G60680.1
AT5G60680
transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)
Chr1_+_28932359 0.29 AT1G76990.5
ACR3
ACT domain repeat 3
Chr3_-_15953346 0.29 AT3G44260.1
CAF1a
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr1_+_29387672 0.29 AT1G78100.1
AUF1
F-box family protein
Chr5_-_25698971 0.29 AT5G64250.1
AT5G64250
Aldolase-type TIM barrel family protein
Chr5_+_1767630 0.29 AT5G05870.1
UGT76C1
UDP-glucosyl transferase 76C1
Chr2_+_9645270 0.29 AT2G22680.1
WAVH1
Zinc finger (C3HC4-type RING finger) family protein
Chr2_+_13014530 0.28 AT2G30550.2
AT2G30550
alpha/beta-Hydrolases superfamily protein
Chr3_+_1983731 0.28 AT3G06470.1
AT3G06470
GNS1/SUR4 membrane protein family
Chr3_+_23289243 0.28 AT3G63010.1
GID1B
alpha/beta-Hydrolases superfamily protein
Chr1_+_20588397 0.28 AT1G55190.1
PRA7
PRA1 (Prenylated rab acceptor) family protein
Chr3_-_19281345 0.28 AT3G51950.3
AT3G51950.1
AT3G51950.2
AT3G51950
Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein
Chr5_-_25699255 0.28 AT5G64250.2
AT5G64250
Aldolase-type TIM barrel family protein
Chr5_+_23355337 0.28 AT5G57660.1
COL5
CONSTANS-like 5
Chr1_+_4423540 0.27 AT1G12970.1
PIRL3
plant intracellular ras group-related LRR 3
Chr5_+_1319074 0.27 AT5G04590.1
SIR
sulfite reductase
Chr4_-_11732674 0.27 AT4G22150.1
PUX3
UBA/UBX domain protein
Chr5_-_19533390 0.27 AT5G48170.1
SLY2
F-box family protein
Chr1_-_11595982 0.26 AT1G32190.2
AT1G32190.1
AT1G32190
alpha/beta-Hydrolases superfamily protein
Chr3_-_1837988 0.26 AT3G06080.2
AT3G06080.1
TBL10
trichome birefringence-like protein (DUF828)
Chr1_-_19851725 0.26 AT1G53230.1
TCP3
TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3
Chr1_+_7588414 0.26 AT1G21640.2
NADK2
NAD kinase 2
Chr1_+_7588589 0.26 AT1G21640.1
NADK2
NAD kinase 2
Chr2_+_12114062 0.26 AT2G28350.2
ARF10
auxin response factor 10
Chr3_+_17567126 0.26 AT3G47640.2
AT3G47640.3
PYE
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr5_-_22764576 0.26 AT5G56240.1
AT5G56240.3
AT5G56240.2
AT5G56240
hapless protein
Chr3_+_22804998 0.25 AT3G61630.1
CRF6
cytokinin response factor 6
Chr2_+_12113889 0.25 AT2G28350.1
ARF10
auxin response factor 10
Chr3_-_19280823 0.25 AT3G51950.4
AT3G51950
Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein
Chr1_-_7382543 0.25 AT1G21080.1
AT1G21080.3
AT1G21080
DNAJ heat shock N-terminal domain-containing protein
Chr1_-_8153530 0.25 AT1G23020.2
AT1G23020.7
AT1G23020.6
AT1G23020.5
AT1G23020.4
AT1G23020.3
AT1G23020.1
FRO3
ferric reduction oxidase 3
Chr4_+_9385119 0.25 AT4G16670.2
AT4G16670.3
AT4G16670.1
AT4G16670
auxin canalization protein (DUF828)
Chr5_-_7366799 0.25 AT5G22250.1
CAF1b
Polynucleotidyl transferase, ribonuclease H-like superfamily protein
Chr2_-_18321696 0.25 AT2G44360.1
AT2G44360
ecotropic viral integration site protein
Chr1_-_7382196 0.25 AT1G21080.2
AT1G21080
DNAJ heat shock N-terminal domain-containing protein
Chr5_-_5006882 0.25 AT5G15410.1
AT5G15410.2
DND1
Cyclic nucleotide-regulated ion channel family protein
Chr2_+_18785990 0.25 AT2G45590.1
AT2G45590
Protein kinase superfamily protein
Chr1_+_29946185 0.25 AT1G79590.2
AT1G79590.1
SYP52
syntaxin of plants 52
Chr1_+_29741728 0.25 AT1G79060.1
AT1G79060
TPRXL
Chr3_+_6120029 0.25 AT3G17860.3
AT3G17860.2
JAZ3
jasmonate-zim-domain protein 3
Chr3_-_16876083 0.24 AT3G45900.1
AT3G45900
Ribonuclease P protein subunit P38-like protein
Chr5_+_21128085 0.24 AT5G52030.1
AT5G52030.2
AT5G52030
TraB family protein
Chr2_+_17285731 0.24 AT2G41460.2
AT2G41460.4
ARP
apurinic endonuclease-redox protein
Chr1_-_19851435 0.24 AT1G53230.2
TCP3
TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3
Chr3_-_821652 0.24 AT3G03450.1
RGL2
RGA-like 2
Chr3_-_1949916 0.23 AT3G06410.1
AT3G06410
Zinc finger C-x8-C-x5-C-x3-H type family protein
Chr2_+_17285470 0.23 AT2G41460.3
AT2G41460.1
ARP
apurinic endonuclease-redox protein
Chr5_-_26879639 0.23 AT5G67370.1
CGLD27
DUF1230 family protein (DUF1230)
Chr1_-_7692459 0.23 AT1G21900.1
p24delta5
emp24/gp25L/p24 family/GOLD family protein
Chr4_-_18381945 0.23 AT4G39550.1
AT4G39550
Galactose oxidase/kelch repeat superfamily protein
Chr2_-_17481241 0.23 AT2G41890.1
AT2G41890
curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein
Chr5_+_3398790 0.23 AT5G10750.1
AT5G10750
enhanced disease resistance-like protein (DUF1336)
Chr1_+_6744353 0.23 AT1G19480.1
AT1G19480.2
AT1G19480
DNA glycosylase superfamily protein
Chr3_+_2476306 0.23 AT3G07760.3
AT3G07760.1
AT3G07760.4
AT3G07760.2
AT3G07760.5
AT3G07760.6
AT3G07760.9
AT3G07760.7
AT3G07760.8
AT3G07760
Sterile alpha motif (SAM) domain-containing protein
Chr1_+_10224815 0.23 AT1G29260.1
PEX7
peroxin 7
Chr1_+_28274588 0.23 AT1G75360.1
AT1G75360.2
AT1G75360
transmembrane protein
Chr1_+_27721190 0.22 AT1G73710.1
AT1G73710
Pentatricopeptide repeat (PPR) superfamily protein
Chr2_-_17701417 0.22 AT2G42500.1
AT2G42500.2
AT2G42500.4
AT2G42500.5
AT2G42500.3
PP2A-3
protein phosphatase 2A-3
Chr3_+_20788610 0.22 AT3G56010.1
AT3G56010
transmembrane protein
Chr5_-_3793026 0.22 AT5G11770.1
AT5G11770
NADH-ubiquinone oxidoreductase 20 kDa subunit
Chr5_-_26804249 0.22 AT5G67180.1
AT5G67180.3
AT5G67180.4
AT5G67180.2
TOE3
target of early activation tagged (EAT) 3
Chr1_+_25230239 0.22 AT1G67340.1
AT1G67340
HCP-like superfamily protein with MYND-type zinc finger
Chr1_-_21562965 0.22 AT1G58220.2
AT1G58220.1
AT1G58220
Homeodomain-like superfamily protein
Chr1_-_3227083 0.21 AT1G09920.1
AT1G09920
TRAF-type zinc finger-like protein
Chr5_+_3831500 0.21 AT5G11890.1
EMB3135
harpin-induced protein
Chr5_-_22763923 0.21 AT5G56240.4
AT5G56240
hapless protein
Chr1_+_29946474 0.21 AT1G79590.3
SYP52
syntaxin of plants 52
Chr1_+_9782847 0.21 AT1G28070.1
AT1G28070
ATP-dependent RNA helicase
Chr2_+_221013 0.21 AT2G01490.1
AT2G01490.2
PAHX
phytanoyl-CoA dioxygenase (PhyH) family protein
Chr1_+_411664 0.21 AT1G02170.1
MC1
metacaspase 1
Chr5_-_19218007 0.21 AT5G47370.1
HAT2
Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein
Chr5_-_17739949 0.21 AT5G44080.1
AT5G44080
Basic-leucine zipper (bZIP) transcription factor family protein
Chr1_+_30097336 0.21 AT1G80010.1
FRS8
FAR1-related sequence 8
Chr1_-_5241538 0.21 AT1G15220.1
AT1G15220.2
CCMH
cytochrome c biogenesis protein family
Chr1_+_4989562 0.21 AT1G14580.3
AT1G14580.2
AT1G14580.1
AT1G14580
C2H2-like zinc finger protein
Chr4_-_320935 0.21 AT4G00752.1
AT4G00752
UBX domain-containing protein
Chr3_-_5038114 0.20 AT3G14960.1
AT3G14960
Galactosyltransferase family protein
Chr2_+_12776208 0.20 AT2G29970.1
AT2G29970
Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
Chr1_+_11464934 0.20 AT1G31930.2
AT1G31930.3
AT1G31930.4
AT1G31930.1
XLG3
extra-large GTP-binding protein 3
Chr3_+_6119707 0.20 AT3G17860.4
AT3G17860.1
JAZ3
jasmonate-zim-domain protein 3
Chr4_-_233652 0.20 AT4G00530.1
AT4G00530
UvrABC system protein A
Chr2_-_17090556 0.20 AT2G40950.1
BZIP17
Basic-leucine zipper (bZIP) transcription factor family protein
Chr3_+_17567476 0.20 AT3G47640.1
PYE
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Chr1_-_16800307 0.20 AT1G44170.2
AT1G44170.1
ALDH3H1
aldehyde dehydrogenase 3H1
Chr3_+_7912905 0.19 AT3G22380.2
AT3G22380.3
AT3G22380.1
TIC
time for coffee
Chr2_+_1041388 0.19 AT2G03450.1
PAP9
purple acid phosphatase 9
Chr1_+_11465246 0.19 AT1G31930.5
AT1G31930.6
XLG3
extra-large GTP-binding protein 3
Chr5_-_3956185 0.19 AT5G12230.1
MED19A
mediator of RNA polymerase II transcription subunit 19a-like protein
Chr4_-_18220324 0.19 AT4G39100.2
AT4G39100.1
SHL1
PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein
Chr3_+_10073082 0.19 AT3G27270.1
AT3G27270
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
Chr3_-_7412457 0.19 AT3G21140.1
AT3G21140
Pyridoxamine 5'-phosphate oxidase family protein
Chr3_+_18377409 0.19 AT3G49590.1
AT3G49590.3
AT3G49590.2
ATG13
Autophagy-related protein 13
Chr3_-_5912001 0.19 AT3G17310.3
DRM3
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Chr4_+_2029855 0.19 AT4G04210.1
PUX4
plant UBX domain containing protein 4
Chr5_-_3286347 0.19 AT5G10450.3
AT5G10450.2
AT5G10450.4
GRF6
G-box regulating factor 6

Network of associatons between targets according to the STRING database.

First level regulatory network of AT4G15090

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 1.3 GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091)
0.1 0.5 GO:0006741 NADP biosynthetic process(GO:0006741)
0.1 0.5 GO:0031468 nuclear envelope reassembly(GO:0031468)
0.1 0.9 GO:0009061 anaerobic respiration(GO:0009061)
0.1 0.5 GO:0048442 sepal development(GO:0048442) flower calyx development(GO:0048464)
0.1 0.3 GO:0010541 acropetal auxin transport(GO:0010541)
0.1 0.7 GO:0007187 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188)
0.1 0.3 GO:0071422 thiosulfate transport(GO:0015709) succinate transmembrane transport(GO:0071422)
0.1 0.5 GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening(GO:0000289)
0.1 1.3 GO:0080027 response to herbivore(GO:0080027)
0.1 1.0 GO:0010262 somatic embryogenesis(GO:0010262)
0.1 0.6 GO:0080190 lateral growth(GO:0080190)
0.1 0.2 GO:0070509 calcium ion import(GO:0070509)
0.1 0.5 GO:0016233 telomere capping(GO:0016233)
0.1 0.6 GO:0045962 positive regulation of development, heterochronic(GO:0045962)
0.1 0.5 GO:0071249 cellular response to nitrate(GO:0071249)
0.1 0.3 GO:0019419 sulfate reduction(GO:0019419)
0.1 0.6 GO:0009610 response to symbiotic fungus(GO:0009610)
0.0 0.1 GO:0046499 S-adenosylmethioninamine biosynthetic process(GO:0006557) S-adenosylmethioninamine metabolic process(GO:0046499)
0.0 0.1 GO:0010501 RNA secondary structure unwinding(GO:0010501)
0.0 0.5 GO:0033683 nucleotide-excision repair, DNA incision(GO:0033683)
0.0 0.2 GO:0006571 tyrosine biosynthetic process(GO:0006571)
0.0 0.2 GO:0006285 base-excision repair, AP site formation(GO:0006285) DNA dealkylation involved in DNA repair(GO:0006307)
0.0 0.5 GO:0010106 cellular response to iron ion starvation(GO:0010106)
0.0 0.7 GO:0006574 valine catabolic process(GO:0006574)
0.0 0.4 GO:1902584 positive regulation of response to water deprivation(GO:1902584)
0.0 0.1 GO:0034625 fatty acid elongation, saturated fatty acid(GO:0019367) fatty acid elongation, unsaturated fatty acid(GO:0019368) fatty acid elongation, monounsaturated fatty acid(GO:0034625) fatty acid elongation, polyunsaturated fatty acid(GO:0034626)
0.0 0.3 GO:0010325 raffinose family oligosaccharide biosynthetic process(GO:0010325)
0.0 0.3 GO:1901001 negative regulation of response to salt stress(GO:1901001)
0.0 0.2 GO:0048863 stem cell differentiation(GO:0048863)
0.0 0.1 GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response(GO:0006990) positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522)
0.0 0.8 GO:2000033 regulation of seed dormancy process(GO:2000033)
0.0 0.7 GO:0019674 NAD metabolic process(GO:0019674)
0.0 0.1 GO:0010480 microsporocyte differentiation(GO:0010480)
0.0 0.8 GO:0010207 photosystem II assembly(GO:0010207)
0.0 0.3 GO:0018344 protein geranylgeranylation(GO:0018344)
0.0 0.5 GO:0080036 regulation of cytokinin-activated signaling pathway(GO:0080036)
0.0 0.1 GO:0006072 glycerol-3-phosphate metabolic process(GO:0006072)
0.0 0.4 GO:0010021 amylopectin biosynthetic process(GO:0010021) amylopectin metabolic process(GO:2000896)
0.0 0.1 GO:0048657 anther wall tapetum formation(GO:0048656) anther wall tapetum cell differentiation(GO:0048657)
0.0 0.1 GO:0009647 skotomorphogenesis(GO:0009647)
0.0 0.7 GO:0009269 response to desiccation(GO:0009269)
0.0 0.5 GO:0070298 negative regulation of ethylene-activated signaling pathway(GO:0010105) negative regulation of phosphorelay signal transduction system(GO:0070298)
0.0 0.7 GO:0009691 cytokinin biosynthetic process(GO:0009691)
0.0 0.1 GO:0043479 pigment accumulation in response to UV light(GO:0043478) pigment accumulation in tissues in response to UV light(GO:0043479) pigment accumulation in tissues(GO:0043480) anthocyanin accumulation in tissues in response to UV light(GO:0043481)
0.0 0.4 GO:0015996 chlorophyll catabolic process(GO:0015996)
0.0 0.7 GO:0009695 jasmonic acid biosynthetic process(GO:0009695)
0.0 0.5 GO:0098869 cellular oxidant detoxification(GO:0098869)
0.0 0.2 GO:0006183 GTP biosynthetic process(GO:0006183)
0.0 0.1 GO:0048830 adventitious root development(GO:0048830)
0.0 0.2 GO:1990641 response to iron ion starvation(GO:1990641)
0.0 0.7 GO:0009718 anthocyanin-containing compound biosynthetic process(GO:0009718)
0.0 0.4 GO:0043649 dicarboxylic acid catabolic process(GO:0043649)
0.0 0.2 GO:0006120 mitochondrial electron transport, NADH to ubiquinone(GO:0006120)
0.0 0.1 GO:0000187 activation of MAPK activity(GO:0000187) positive regulation of MAP kinase activity(GO:0043406)
0.0 1.4 GO:0043067 regulation of programmed cell death(GO:0043067)
0.0 0.2 GO:0016558 protein import into peroxisome matrix(GO:0016558)
0.0 0.2 GO:0017006 protein-tetrapyrrole linkage(GO:0017006)
0.0 0.3 GO:0009937 regulation of gibberellic acid mediated signaling pathway(GO:0009937)
0.0 0.3 GO:0048829 root cap development(GO:0048829)
0.0 0.6 GO:0048574 long-day photoperiodism, flowering(GO:0048574)
0.0 0.3 GO:0007602 phototransduction(GO:0007602) red, far-red light phototransduction(GO:0009585)
0.0 0.2 GO:0097031 mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031)
0.0 0.2 GO:0016559 peroxisome fission(GO:0016559)
0.0 0.6 GO:0009910 negative regulation of flower development(GO:0009910)
0.0 0.6 GO:0055046 microgametogenesis(GO:0055046)
0.0 0.4 GO:0050826 response to freezing(GO:0050826)
0.0 0.1 GO:0006880 intracellular sequestering of iron ion(GO:0006880) sequestering of iron ion(GO:0097577)
0.0 0.6 GO:0090332 stomatal closure(GO:0090332)
0.0 0.1 GO:0043266 regulation of potassium ion transport(GO:0043266)
0.0 0.1 GO:0009094 L-phenylalanine biosynthetic process(GO:0009094) aromatic amino acid family biosynthetic process, prephenate pathway(GO:0009095) erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process(GO:1902223)
0.0 0.1 GO:0006882 cellular zinc ion homeostasis(GO:0006882)
0.0 0.2 GO:1905037 autophagosome assembly(GO:0000045) autophagosome organization(GO:1905037)
0.0 0.6 GO:0009809 lignin biosynthetic process(GO:0009809)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.5 GO:0030015 CCR4-NOT core complex(GO:0030015)
0.1 1.0 GO:0016602 CCAAT-binding factor complex(GO:0016602)
0.0 0.2 GO:0031907 peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907)
0.0 0.3 GO:0005968 Rab-protein geranylgeranyltransferase complex(GO:0005968)
0.0 0.3 GO:0005834 heterotrimeric G-protein complex(GO:0005834)
0.0 0.2 GO:0005776 autophagosome(GO:0005776)
0.0 0.3 GO:0016272 prefoldin complex(GO:0016272)
0.0 0.5 GO:0000784 nuclear chromosome, telomeric region(GO:0000784)
0.0 0.3 GO:0005801 cis-Golgi network(GO:0005801)
0.0 0.1 GO:0031083 BLOC complex(GO:0031082) BLOC-1 complex(GO:0031083)
0.0 0.7 GO:0042644 chloroplast nucleoid(GO:0042644)
0.0 0.2 GO:0035267 NuA4 histone acetyltransferase complex(GO:0035267) H4/H2A histone acetyltransferase complex(GO:0043189) H4 histone acetyltransferase complex(GO:1902562)
0.0 0.1 GO:0010445 nuclear dicing body(GO:0010445)
0.0 0.2 GO:0030140 trans-Golgi network transport vesicle(GO:0030140)
0.0 0.2 GO:0033179 proton-transporting V-type ATPase, V0 domain(GO:0033179)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:0008936 nicotinamidase activity(GO:0008936)
0.2 0.7 GO:0008442 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442)
0.2 0.5 GO:0008311 phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311)
0.1 1.3 GO:0008061 chitin binding(GO:0008061)
0.1 0.5 GO:0004535 poly(A)-specific ribonuclease activity(GO:0004535)
0.1 0.4 GO:0046423 allene-oxide cyclase activity(GO:0046423)
0.1 0.7 GO:0016621 cinnamoyl-CoA reductase activity(GO:0016621)
0.1 0.3 GO:0010331 gibberellin binding(GO:0010331)
0.1 0.4 GO:0019156 isoamylase activity(GO:0019156)
0.1 0.3 GO:0015117 thiosulfate transmembrane transporter activity(GO:0015117)
0.1 0.7 GO:0052622 ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623)
0.1 0.6 GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)(GO:0016703)
0.1 0.3 GO:0016165 linoleate 13S-lipoxygenase activity(GO:0016165)
0.1 0.2 GO:0032131 alkylated DNA binding(GO:0032131)
0.1 0.4 GO:0031956 medium-chain fatty acid-CoA ligase activity(GO:0031956)
0.1 0.3 GO:0010313 phytochrome binding(GO:0010313)
0.1 0.3 GO:0004028 3-chloroallyl aldehyde dehydrogenase activity(GO:0004028)
0.1 0.3 GO:0001664 G-protein coupled receptor binding(GO:0001664) G-protein beta/gamma-subunit complex binding(GO:0031683)
0.1 0.2 GO:0000268 peroxisome targeting sequence binding(GO:0000268)
0.1 0.5 GO:0035198 miRNA binding(GO:0035198)
0.0 0.3 GO:0004664 prephenate dehydratase activity(GO:0004664) arogenate dehydratase activity(GO:0047769)
0.0 0.1 GO:0004014 adenosylmethionine decarboxylase activity(GO:0004014)
0.0 0.5 GO:0015112 nitrate transmembrane transporter activity(GO:0015112)
0.0 0.1 GO:0008253 5'-nucleotidase activity(GO:0008253)
0.0 0.2 GO:0005221 intracellular cyclic nucleotide activated cation channel activity(GO:0005221) cyclic nucleotide-gated ion channel activity(GO:0043855)
0.0 0.5 GO:0030674 protein binding, bridging(GO:0030674)
0.0 0.2 GO:1990841 promoter-specific chromatin binding(GO:1990841)
0.0 0.3 GO:0010328 auxin influx transmembrane transporter activity(GO:0010328)
0.0 0.3 GO:0005092 GDP-dissociation inhibitor activity(GO:0005092)
0.0 0.3 GO:0004930 G-protein coupled receptor activity(GO:0004930)
0.0 0.1 GO:0004322 ferroxidase activity(GO:0004322) oxidoreductase activity, oxidizing metal ions, oxygen as acceptor(GO:0016724)
0.0 0.2 GO:0048038 quinone binding(GO:0048038)
0.0 0.3 GO:0016722 ferric-chelate reductase activity(GO:0000293) oxidoreductase activity, oxidizing metal ions(GO:0016722) oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor(GO:0016723)
0.0 0.7 GO:0016597 amino acid binding(GO:0016597)
0.0 0.2 GO:0016161 beta-amylase activity(GO:0016161)
0.0 0.1 GO:0098599 palmitoyl hydrolase activity(GO:0098599)
0.0 0.4 GO:0045309 protein phosphorylated amino acid binding(GO:0045309) phosphoprotein binding(GO:0051219)
0.0 0.2 GO:0051117 ATPase binding(GO:0051117)
0.0 0.2 GO:0048040 UDP-glucuronate decarboxylase activity(GO:0048040)
0.0 0.3 GO:0046961 proton-transporting ATPase activity, rotational mechanism(GO:0046961)
0.0 0.1 GO:0003680 AT DNA binding(GO:0003680)
0.0 0.1 GO:0050378 UDP-glucuronate 4-epimerase activity(GO:0050378)
0.0 0.7 GO:0080044 quercetin 7-O-glucosyltransferase activity(GO:0080044)
0.0 0.1 GO:0009922 fatty acid elongase activity(GO:0009922)
0.0 0.0 GO:0080042 ADP-glucose pyrophosphohydrolase activity(GO:0080042)
0.0 0.2 GO:0004864 protein phosphatase inhibitor activity(GO:0004864)
0.0 0.0 GO:0015173 aromatic amino acid transmembrane transporter activity(GO:0015173)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES Genes related to the insulin receptor pathway
0.0 0.0 PID IL12 2PATHWAY IL12-mediated signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.7 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines