GSE43616: Time-course of wild-type Arabidopsis leaf
Gene Symbol | Gene ID | Gene Info |
---|---|---|
AT4G15090
|
AT4G15090 | FRS (FAR1 Related Sequences) transcription factor family |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
FAR1 | arTal_v1_Chr4_+_8614060_8614067 | 0.02 | 9.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
arTal_v1_Chr2_-_6493512_6493512 Show fit | 1.45 |
AT2G15020.1
|
hypothetical protein |
|
arTal_v1_Chr3_-_1286760_1286760 Show fit | 1.35 |
AT3G04720.1
|
pathogenesis-related 4 |
|
arTal_v1_Chr3_-_826585_826585 Show fit | 1.29 |
AT3G03470.1
|
cytochrome P450, family 87, subfamily A, polypeptide 9 |
|
arTal_v1_Chr1_-_27171410_27171410 Show fit | 1.00 |
AT1G72200.1
|
RING/U-box superfamily protein |
|
arTal_v1_Chr4_+_7304323_7304323 Show fit | 0.94 |
AT4G12290.2
|
Copper amine oxidase family protein |
|
arTal_v1_Chr4_+_7303985_7303985 Show fit | 0.93 |
AT4G12290.1
|
Copper amine oxidase family protein |
|
arTal_v1_Chr1_+_6450585_6450585 Show fit | 0.91 |
AT1G18710.1
|
myb domain protein 47 |
|
arTal_v1_Chr2_+_15192480_15192480 Show fit | 0.90 |
AT2G36220.1
|
hypothetical protein |
|
arTal_v1_Chr1_+_26651840_26651840 Show fit | 0.89 |
AT1G70690.1
|
Receptor-like protein kinase-related family protein |
|
arTal_v1_Chr2_+_17165191_17165191 Show fit | 0.85 |
AT2G41180.1
|
VQ motif-containing protein |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.4 | GO:0043067 | regulation of programmed cell death(GO:0043067) |
0.3 | 1.3 | GO:0051091 | positive regulation of sequence-specific DNA binding transcription factor activity(GO:0051091) |
0.1 | 1.3 | GO:0080027 | response to herbivore(GO:0080027) |
0.1 | 1.0 | GO:0010262 | somatic embryogenesis(GO:0010262) |
0.1 | 0.9 | GO:0009061 | anaerobic respiration(GO:0009061) |
0.0 | 0.8 | GO:2000033 | regulation of seed dormancy process(GO:2000033) |
0.0 | 0.8 | GO:0010207 | photosystem II assembly(GO:0010207) |
0.1 | 0.7 | GO:0007187 | G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger(GO:0007187) adenylate cyclase-modulating G-protein coupled receptor signaling pathway(GO:0007188) |
0.0 | 0.7 | GO:0006574 | valine catabolic process(GO:0006574) |
0.0 | 0.7 | GO:0019674 | NAD metabolic process(GO:0019674) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.0 | GO:0016602 | CCAAT-binding factor complex(GO:0016602) |
0.0 | 0.7 | GO:0042644 | chloroplast nucleoid(GO:0042644) |
0.2 | 0.5 | GO:0030015 | CCR4-NOT core complex(GO:0030015) |
0.0 | 0.5 | GO:0000784 | nuclear chromosome, telomeric region(GO:0000784) |
0.0 | 0.3 | GO:0005968 | Rab-protein geranylgeranyltransferase complex(GO:0005968) |
0.0 | 0.3 | GO:0005834 | heterotrimeric G-protein complex(GO:0005834) |
0.0 | 0.3 | GO:0016272 | prefoldin complex(GO:0016272) |
0.0 | 0.3 | GO:0005801 | cis-Golgi network(GO:0005801) |
0.0 | 0.2 | GO:0031907 | peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907) |
0.0 | 0.2 | GO:0005776 | autophagosome(GO:0005776) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.3 | GO:0008061 | chitin binding(GO:0008061) |
0.2 | 0.7 | GO:0008936 | nicotinamidase activity(GO:0008936) |
0.2 | 0.7 | GO:0008442 | 3-hydroxyisobutyrate dehydrogenase activity(GO:0008442) |
0.1 | 0.7 | GO:0016621 | cinnamoyl-CoA reductase activity(GO:0016621) |
0.1 | 0.7 | GO:0052622 | ATP dimethylallyltransferase activity(GO:0052622) ADP dimethylallyltransferase activity(GO:0052623) |
0.0 | 0.7 | GO:0016597 | amino acid binding(GO:0016597) |
0.0 | 0.7 | GO:0080044 | quercetin 7-O-glucosyltransferase activity(GO:0080044) |
0.1 | 0.6 | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)(GO:0016703) |
0.2 | 0.5 | GO:0008311 | phosphodiesterase I activity(GO:0004528) double-stranded DNA 3'-5' exodeoxyribonuclease activity(GO:0008311) |
0.1 | 0.5 | GO:0004535 | poly(A)-specific ribonuclease activity(GO:0004535) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.2 | SIG INSULIN RECEPTOR PATHWAY IN CARDIAC MYOCYTES | Genes related to the insulin receptor pathway |
0.0 | 0.0 | PID IL12 2PATHWAY | IL12-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 0.7 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |